BLASTX nr result
ID: Achyranthes22_contig00061879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00061879
(287 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 156 3e-36
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 155 7e-36
dbj|BAA22288.1| polyprotein [Oryza australiensis] 154 2e-35
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 153 3e-35
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 152 4e-35
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 152 4e-35
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 152 6e-35
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 152 6e-35
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 151 7e-35
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 151 7e-35
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 151 1e-34
gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e... 150 1e-34
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776... 150 2e-34
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 149 3e-34
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group] 149 5e-34
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 148 6e-34
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc... 148 8e-34
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 148 8e-34
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 147 1e-33
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 147 1e-33
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 156 bits (394), Expect = 3e-36
Identities = 72/95 (75%), Positives = 83/95 (87%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L EDVYMTQPEGFV + A KVCKL+KSIYGLKQAS
Sbjct: 888 LAIAAYFDYEIWQMDVKTAFLNGKLSEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQAS 947
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE IK FGF++N EE CVY K+SGS ++
Sbjct: 948 RSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLV 982
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 155 bits (391), Expect = 7e-36
Identities = 72/94 (76%), Positives = 82/94 (87%)
Frame = -2
Query: 283 AVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQASR 104
A+A+Y+DYEIWQMDVKTAFLNG L EDVYMTQPEGFV + A KVCKL+KSIYGLKQASR
Sbjct: 473 AIAAYFDYEIWQMDVKTAFLNGNLHEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASR 532
Query: 103 SWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
SWN+RFDE IK FGFI+N EE CVY K+SGS ++
Sbjct: 533 SWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLV 566
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 154 bits (388), Expect = 2e-35
Identities = 71/95 (74%), Positives = 83/95 (87%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L EDVYM QP+GFV + K+CKL+KSIYGLKQAS
Sbjct: 892 LAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQAS 951
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE IK FGFI+N EE+CVYKK+SGS I+
Sbjct: 952 RSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIV 986
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 153 bits (386), Expect = 3e-35
Identities = 74/94 (78%), Positives = 80/94 (85%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA A++YDYEIWQMDVKTAFLNG LEE VYMTQPEGF V + A KVCKL +SIYGLKQAS
Sbjct: 539 LATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQAS 598
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNI 5
RSWNLRF+EAIK F FIRN EE CVYKK SGS +
Sbjct: 599 RSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAV 632
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 152 bits (384), Expect = 4e-35
Identities = 68/95 (71%), Positives = 84/95 (88%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L+EDVYMTQP+GFV A+K+CKL+KSIYGLKQAS
Sbjct: 815 LAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQAS 874
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF++N E CVYKK+SGS ++
Sbjct: 875 RSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALV 909
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 152 bits (384), Expect = 4e-35
Identities = 68/95 (71%), Positives = 84/95 (88%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L+EDVYMTQP+GFV A+K+CKL+KSIYGLKQAS
Sbjct: 757 LAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQAS 816
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF++N E CVYKK+SGS ++
Sbjct: 817 RSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALV 851
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 152 bits (383), Expect = 6e-35
Identities = 68/95 (71%), Positives = 84/95 (88%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L+EDVYMTQP+GFV A+K+CKL+KSIY LKQAS
Sbjct: 841 LAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLKQAS 900
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF++N EE CVYKK+SGS ++
Sbjct: 901 RSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALV 935
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 152 bits (383), Expect = 6e-35
Identities = 68/95 (71%), Positives = 84/95 (88%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L+EDVYMTQP+GFV A+K+CKL+KSIY LKQAS
Sbjct: 754 LAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLKQAS 813
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF++N EE CVYKK+SGS ++
Sbjct: 814 RSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALV 848
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 151 bits (382), Expect = 7e-35
Identities = 68/95 (71%), Positives = 85/95 (89%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFL+G L+EDVYMTQP+GFV A+K+CKL+KSIYGLKQAS
Sbjct: 446 LAIAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQAS 505
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE IK+ GF++N EE CVYKK++GS ++
Sbjct: 506 RSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALM 540
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 151 bits (382), Expect = 7e-35
Identities = 68/95 (71%), Positives = 85/95 (89%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFL+G L+EDVYMTQP+GFV A+K+CKL+KSIYGLKQAS
Sbjct: 401 LAIAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQAS 460
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE IK+ GF++N EE CVYKK++GS ++
Sbjct: 461 RSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALM 495
>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 151 bits (381), Expect = 1e-34
Identities = 67/95 (70%), Positives = 84/95 (88%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVK AFLNG L+EDVYMTQP+GFV A+K+CKL+KSIYGLKQAS
Sbjct: 775 LAIAAYFDYEIWQMDVKIAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQAS 834
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF++N E+ CVYKK+SGS ++
Sbjct: 835 RSWNIRFDEIVKALGFVKNEEDPCVYKKISGSALV 869
>gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 566
Score = 150 bits (380), Expect = 1e-34
Identities = 70/95 (73%), Positives = 80/95 (84%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVK AFLNG L EDVYMTQPE FV +A KVCKL KSIYGLKQAS
Sbjct: 353 LAIAAYFDYEIWQMDVKMAFLNGNLSEDVYMTQPESFVDLKEARKVCKLNKSIYGLKQAS 412
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K F FI+N EE CVYKK+SGS ++
Sbjct: 413 RSWNIRFDEVVKGFDFIKNEEEPCVYKKVSGSKLV 447
>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
italica]
Length = 1686
Score = 150 bits (378), Expect = 2e-34
Identities = 69/95 (72%), Positives = 82/95 (86%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L +DVYM QPEGFV A KVCKL++SIYGLKQAS
Sbjct: 303 LAIAAYFDYEIWQMDVKTAFLNGNLAKDVYMIQPEGFVDPKNAGKVCKLQRSIYGLKQAS 362
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K F F +N EESCVYKK+SGS+++
Sbjct: 363 RSWNIRFDEVVKGFDFTKNEEESCVYKKVSGSSVV 397
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 149 bits (377), Expect = 3e-34
Identities = 67/92 (72%), Positives = 81/92 (88%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
L++A++Y+YEIWQMDVKTAFLNG LEE +YM QPEGF+ QDQ +KVCKL+KSIYGLKQAS
Sbjct: 902 LSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQAS 961
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGS 11
RSWN+RFD AIKS+GF +N +E CVYKK+ S
Sbjct: 962 RSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNS 993
>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
Length = 746
Score = 149 bits (375), Expect = 5e-34
Identities = 67/92 (72%), Positives = 82/92 (89%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQMDVKTAFLNG L+EDVYMTQP+GFV A+K+CKL+KSIYGLKQAS
Sbjct: 501 LAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQAS 560
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGS 11
RSWN+RFDE +K+ GF++N EE CVYKK++ S
Sbjct: 561 RSWNIRFDEVVKASGFVKNEEEPCVYKKINRS 592
>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 148 bits (374), Expect = 6e-34
Identities = 66/95 (69%), Positives = 83/95 (87%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y++YEIWQMDVKT FLNG L+EDVYMTQP+GFV A+K+CKL+KSIYGLKQAS
Sbjct: 677 LAIAAYFNYEIWQMDVKTTFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQAS 736
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ F++N EE CVYKK+SGS ++
Sbjct: 737 RSWNIRFDEVVKALRFVKNEEEPCVYKKISGSALV 771
>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 810
Score = 148 bits (373), Expect = 8e-34
Identities = 65/95 (68%), Positives = 83/95 (87%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
L +A+Y+DYEIWQMDVKTA LNG L+EDVYMTQP+GFV A+K+CKL+KSIYGLK+AS
Sbjct: 598 LTIAAYFDYEIWQMDVKTALLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKKAS 657
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFD+ +K+ GF++N EE CVYKK+SGS ++
Sbjct: 658 RSWNIRFDKVVKALGFVKNEEEPCVYKKISGSALV 692
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 148 bits (373), Expect = 8e-34
Identities = 67/95 (70%), Positives = 82/95 (86%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQM VKTAFLNG L+EDVYMTQP+GF A+K+CKL +SIYGLKQAS
Sbjct: 763 LAIAAYFDYEIWQMYVKTAFLNGNLDEDVYMTQPKGFDDPQSAKKICKLHQSIYGLKQAS 822
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF+RN EE CVYKK+SGS ++
Sbjct: 823 RSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALV 857
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 147 bits (371), Expect = 1e-33
Identities = 66/95 (69%), Positives = 83/95 (87%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQM+VKTAFLNG +EDVYMTQP+GFV A+ +CKL+KSIYGLKQAS
Sbjct: 822 LAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLKQAS 881
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF++N EE CVYKK+SGS ++
Sbjct: 882 RSWNIRFDELVKALGFLKNEEEPCVYKKISGSALV 916
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 147 bits (371), Expect = 1e-33
Identities = 66/95 (69%), Positives = 83/95 (87%)
Frame = -2
Query: 286 LAVASYYDYEIWQMDVKTAFLNGILEEDVYMTQPEGFVVQDQAEKVCKLRKSIYGLKQAS 107
LA+A+Y+DYEIWQM+VKTAFLNG +EDVYMTQP+GFV A+ +CKL+KSIYGLKQAS
Sbjct: 812 LAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLKQAS 871
Query: 106 RSWNLRFDEAIKSFGFIRNCEESCVYKKLSGSNII 2
RSWN+RFDE +K+ GF++N EE CVYKK+SGS ++
Sbjct: 872 RSWNIRFDELVKALGFLKNEEEPCVYKKISGSALV 906