BLASTX nr result

ID: Achyranthes22_contig00059437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00059437
         (642 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006280562.1| hypothetical protein CARUB_v10026503mg, part...    56   8e-06

>ref|XP_006280562.1| hypothetical protein CARUB_v10026503mg, partial [Capsella rubella]
           gi|482549266|gb|EOA13460.1| hypothetical protein
           CARUB_v10026503mg, partial [Capsella rubella]
          Length = 411

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
 Frame = -3

Query: 553 HRPYCLFGPNFYKTTVAPLFSLNHPGIFSSRAGFTPPQVATSSSNPPVSPQHSTHQFSPK 374
           H P     P    +TVAP  + +H    S R+  +P Q   SS +P +SP H+    SPK
Sbjct: 240 HSPVSPIAPAKPPSTVAPSHAPSH----SPRSSVSPAQPPKSSHSPALSPSHAPSH-SPK 294

Query: 373 LDPRFVSHSPVHAPSFSESDIEITQVPFASSPPNLKSRK------RNHPESQGKKSGVQH 212
             P  VSHSP HAPS S + +  +  P + SP +  S           P+S         
Sbjct: 295 -SPSPVSHSPSHAPSHSPATLPPSPSPVSHSPSHAPSHSPATSPPSPSPDSTPSPVSPAS 353

Query: 211 GPSRQTTQRWNTPSQ 167
            PS QT     +PSQ
Sbjct: 354 SPSDQTPPLSPSPSQ 368


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