BLASTX nr result

ID: Achyranthes22_contig00058253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00058253
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004300272.1| coat protein [Sweet potato vein clearing vir...    86   9e-15
ref|NP_569139.1| putative coat protein [Tobacco vein clearing vi...    82   1e-13
emb|CAC88796.1| putative coat protein [Nicotiana tabacum]              79   8e-13
emb|CAC88802.1| putative coat protein [Nicotiana tabacum]              79   8e-13
emb|CAC88783.1| putative coat protein [Nicotiana tabacum]              79   8e-13
emb|CAB42620.1| putative coat protein [Nicotiana tabacum]              79   8e-13
emb|CAC88811.1| putative coat protein [Nicotiana tabacum]              75   2e-11
ref|YP_004347414.1| coat protein/movement protein [Sweet potato ...    72   1e-10
gb|AAA79871.1| ORF I [Cassava vein mosaic virus]                       65   1e-08
ref|NP_056846.1| coat protein/movement protein [Cassava vein mos...    65   1e-08

>ref|YP_004300272.1| coat protein [Sweet potato vein clearing virus]
           gi|325698379|gb|ADZ45062.1| coat protein [Sweet potato
           vein clearing virus]
          Length = 650

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
 Frame = +2

Query: 5   AIEMLKKFEKLIKREFGNLKADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDFRKY 184
           A+++L K+E LI+ EF +  +++++   E+      L  + + ++C  +I  Y C F KY
Sbjct: 394 AMDILVKYELLIRSEFSSATSEANKKYGEQLKNRIFLNQLAICNLC--YINEYCCAFSKY 451

Query: 185 YYQTKITE---TWVKQLFFDKLPYPINQLITTEYNSSAKIGSLGERISYLKTWYNSYCNN 355
           YY +  +E   + +++L F+K+P P    IT  +  + K  +LG RI++LK WY   C  
Sbjct: 452 YYNSGYSEEDRSEIRKLLFNKIPEPFGTQITQLWLENQKTDTLGNRIAFLKDWYIDMCLE 511

Query: 356 KTQNKLISYKMKDIDWCCPEYLPPTYG 436
                 I  ++K    CC E LPP YG
Sbjct: 512 YKNRSKIKKEIKFSRKCCKEVLPPEYG 538


>ref|NP_569139.1| putative coat protein [Tobacco vein clearing virus]
           gi|6425073|gb|AAF08287.1|AF190123_1 putative coat
           protein [Tobacco vein clearing virus]
          Length = 579

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   TAIEMLKKFEKLIKREFGNLKADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDFRK 181
           T++E+L K+E  I+ EF ++  ++ +  +EK    N +  + + +MC  +I+ Y C FR+
Sbjct: 311 TSMEILYKYEIAIRNEFSSMTTETEEQHKEKQINRNLMTKLAICNMC--YIDEYTCAFRE 368

Query: 182 YYYQ-TKITETW--VKQLFFDKLPYPINQLITTEYNSSAKIGSLGERISYLKTWYNSYCN 352
           YYY+ T  TE    +++L+F KLP P +  I  ++N +    +LG RI +L+ W+   C 
Sbjct: 369 YYYKGTYNTEEGREIRKLYFTKLPEPFSSKIIKDWNEAGLTDTLGARIKFLQQWFVQLCE 428

Query: 353 N-KTQNKLISYKMKDIDWCCPEYLPPTYGKT 442
             K + K+    +K++  CC     P +G T
Sbjct: 429 KYKEEIKMEKILIKNLK-CCKNKTAPQFGCT 458


>emb|CAC88796.1| putative coat protein [Nicotiana tabacum]
          Length = 594

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   TAIEMLKKFEKLIKREFGNLKADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDFRK 181
           T  ++L K+E  I+ EF ++  +  +  +EK    N +  + + +MC  +I+ Y C FR 
Sbjct: 320 TVTDILNKYEIAIRNEFSSMTTEVEEQNKEKITNRNLMTKLAICNMC--YIDEYTCAFRD 377

Query: 182 YYYQTKIT---ETWVKQLFFDKLPYPINQLITTEYNSSAKIGSLGERISYLKTWYNSYCN 352
           YYY+   +      +++L+F KLP P +  I   +N +    +LG RI +L+ W+   C 
Sbjct: 378 YYYKGTYSPDESKEIRKLYFTKLPEPFSSKIIKSWNEAGLADTLGVRIKFLQNWFIELCE 437

Query: 353 NKTQN-KLISYKMKDIDWCCPEYLPPTYGKT 442
              +N K+    +K++  CC   + P +G T
Sbjct: 438 KYKENMKMEKILVKNLA-CCKSRIAPQFGCT 467


>emb|CAC88802.1| putative coat protein [Nicotiana tabacum]
          Length = 594

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   TAIEMLKKFEKLIKREFGNLKADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDFRK 181
           T  ++L K+E  I+ EF ++  +  +  +EK    N +  + + +MC  +I+ Y C FR 
Sbjct: 320 TVTDILNKYEIAIRNEFSSMTTEVEEQNKEKITNRNLMTKLAICNMC--YIDEYTCAFRD 377

Query: 182 YYYQTKIT---ETWVKQLFFDKLPYPINQLITTEYNSSAKIGSLGERISYLKTWYNSYCN 352
           YYY+   +      +++L+F KLP P +  I   +N +    +LG RI +L+ W+   C 
Sbjct: 378 YYYKGTYSPDESKEIRKLYFTKLPEPFSSKIIKSWNEAGLADTLGVRIKFLQNWFIELCE 437

Query: 353 NKTQN-KLISYKMKDIDWCCPEYLPPTYGKT 442
              +N K+    +K++  CC   + P +G T
Sbjct: 438 KYKENMKMEKILVKNLA-CCKSRIAPQFGCT 467


>emb|CAC88783.1| putative coat protein [Nicotiana tabacum]
          Length = 598

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   TAIEMLKKFEKLIKREFGNLKADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDFRK 181
           T  ++L K+E  I+ EF ++  +  +  +EK    N +  + + +MC  +I+ Y C FR 
Sbjct: 324 TVTDILNKYEIAIRNEFSSMTTEVEEQNKEKITNRNLMTKLAICNMC--YIDEYTCAFRD 381

Query: 182 YYYQTKIT---ETWVKQLFFDKLPYPINQLITTEYNSSAKIGSLGERISYLKTWYNSYCN 352
           YYY+   +      +++L+F KLP P +  I   +N +    +LG RI +L+ W+   C 
Sbjct: 382 YYYKGTYSPDESKEIRKLYFTKLPEPFSSKIIKSWNEAGLADTLGVRIKFLQNWFIELCE 441

Query: 353 NKTQN-KLISYKMKDIDWCCPEYLPPTYGKT 442
              +N K+    +K++  CC   + P +G T
Sbjct: 442 KYKENMKMEKILVKNLA-CCKSRIAPQFGCT 471


>emb|CAB42620.1| putative coat protein [Nicotiana tabacum]
          Length = 598

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   TAIEMLKKFEKLIKREFGNLKADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDFRK 181
           T  ++L K+E  I+ EF ++  +  +  +EK    N +  + + +MC  +I+ Y C FR 
Sbjct: 324 TVTDILNKYEIAIRNEFSSMTTEVEEQNKEKITNRNLMTKLAICNMC--YIDEYTCAFRD 381

Query: 182 YYYQTKIT---ETWVKQLFFDKLPYPINQLITTEYNSSAKIGSLGERISYLKTWYNSYCN 352
           YYY+   +      +++L+F KLP P +  I   +N +    +LG RI +L+ W+   C 
Sbjct: 382 YYYKGTYSPDESKEIRKLYFTKLPEPFSSKIIKSWNEAGLADTLGVRIKFLQNWFIELCE 441

Query: 353 NKTQN-KLISYKMKDIDWCCPEYLPPTYGKT 442
              +N K+    +K++  CC   + P +G T
Sbjct: 442 KYKENMKMEKILVKNLA-CCKSRIAPQFGCT 471


>emb|CAC88811.1| putative coat protein [Nicotiana tabacum]
          Length = 269

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = +2

Query: 23  KFEKLIKREFGNLKADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDFRKYYYQTKI 202
           K+E  I+ EF ++  +  +  +EK    N +  + + +MC  +I+ Y C FR YYY+   
Sbjct: 2   KYEIAIRNEFSSMTTEVEEQNKEKITNRNLMTKLAICNMC--YIDEYTCAFRDYYYKGTY 59

Query: 203 T---ETWVKQLFFDKLPYPINQLITTEYNSSAKIGSLGERISYLKTWYNSYCNNKTQN-K 370
           +      +++L+F KLP P +  I   +N +    +LG RI +L+ W+   C    +N K
Sbjct: 60  SPDESKEIRKLYFTKLPEPFSSKIIKSWNEAGLADTLGVRIKFLQNWFIELCEKYKENMK 119

Query: 371 LISYKMKDIDWCCPEYLPPTYGKT 442
           +    +K++  CC   + P +G T
Sbjct: 120 MEKILVKNLA-CCKSRIAPQFGCT 142


>ref|YP_004347414.1| coat protein/movement protein [Sweet potato caulimo-like virus]
           gi|327202119|gb|AEA36696.1| coat protein/movement
           protein [Sweet potato caulimo-like virus]
          Length = 1264

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
 Frame = +2

Query: 2   TAIEMLKKFEKLIKREFGNL--KADSSQIEQEKTNAINKLKGMKLYSMCPEHIERYICDF 175
           +A+  L   E  I+ EFG L  + D++++ ++K +A  KL  + + +M  E+++ YIC+F
Sbjct: 536 SALSTLANIEVAIRAEFGKLGIENDATKMTRKKNSARAKLMQLSICNMRMENLKAYICEF 595

Query: 176 RKYYYQTKITETWVKQ---LFFDKLPYPINQLITTEYNSSAK----IGSLGERISYLKTW 334
           ++Y+Y+   ++   +Q   +F+ KLP P    I   YN + K    + SLG RI+YL   
Sbjct: 596 KEYFYKAAYSDEEREQILDIFYTKLPDPWGMSILEAYNLNEKGRITLDSLGSRITYLFES 655

Query: 335 YNSYCNNKTQNKLISYKMK 391
             S C     NK+    MK
Sbjct: 656 ITSRCEQDRMNKIAKKTMK 674


>gb|AAA79871.1| ORF I [Cassava vein mosaic virus]
          Length = 1372

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
 Frame = +2

Query: 17   LKKFEKLIKREFGNLKADSSQIEQEKTNAI--NKLKGMKLYSMCPEHIERYICDFRKYYY 190
            L   E  ++ EFG L  +S   + EK  +I  +K+  +++ SM  +++  Y+C+F++YYY
Sbjct: 543  LTHMELGLRAEFGKLGIESDVEKHEKKTSIARHKILQLQICSMDHQNLNAYLCEFQEYYY 602

Query: 191  QTKITETW---VKQLFFDKLPYPINQLITTEYNSSAK----IGSLGERISYLKTWYNSYC 349
                TE     +  +F+ KLP P  Q +   Y S  K    + S+G R++YL+ + +  C
Sbjct: 603  SANYTEAESENILNMFYSKLPEPWGQQVLNGYLSEIKGKNLLDSIGARMTYLQEFISDKC 662

Query: 350  -NNKTQNKLISYKM-KDIDWCCPEYLPPTYG-KTIR 448
              N TQ +    ++ K++D  C  Y    YG K IR
Sbjct: 663  KENWTQKQARKIQLSKNLD--CSYYEVGKYGCKQIR 696


>ref|NP_056846.1| coat protein/movement protein [Cassava vein mosaic virus]
            gi|82020339|sp|Q66283.1|CP_CSVMV RecName: Full=Putative
            Polyprotein CP; Contains: RecName: Full=Capsid protein;
            AltName: Full=Coat protein; Short=CP; Contains: RecName:
            Full=Movement protein; Short=Mov; AltName:
            Full=Cell-to-cell transport protein
            gi|1399882|gb|AAB03325.1| ORF 1 [Cassava vein mosaic
            virus]
          Length = 1372

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
 Frame = +2

Query: 17   LKKFEKLIKREFGNLKADSSQIEQEKTNAI--NKLKGMKLYSMCPEHIERYICDFRKYYY 190
            L   E  ++ EFG L  +S   + EK  +I  +K+  +++ SM  +++  Y+C+F++YYY
Sbjct: 543  LTHMELGLRAEFGKLGIESDVEKHEKKTSIARHKILQLQICSMDHQNLNAYLCEFQEYYY 602

Query: 191  QTKITETW---VKQLFFDKLPYPINQLITTEYNSSAK----IGSLGERISYLKTWYNSYC 349
                TE     +  +F+ KLP P  Q +   Y S  K    + S+G R++YL+ + +  C
Sbjct: 603  SANYTEAESENILNMFYSKLPEPWGQQVLNGYLSEIKGKNLLDSIGARMTYLQEFISDKC 662

Query: 350  -NNKTQNKLISYKM-KDIDWCCPEYLPPTYG-KTIR 448
              N TQ +    ++ K++D  C  Y    YG K IR
Sbjct: 663  KENWTQKQARKIQLSKNLD--CSYYEVGKYGCKQIR 696


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