BLASTX nr result

ID: Achyranthes22_contig00058143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00058143
         (245 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    63   4e-08
emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]    63   4e-08
ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, par...    62   6e-08
dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]                      59   9e-07
ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana] g...    59   9e-07
gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protei...    59   9e-07
ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding...    58   1e-06
gb|EMJ15547.1| hypothetical protein PRUPE_ppa000116mg [Prunus pe...    57   3e-06
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...    57   3e-06
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...    57   3e-06
ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding...    56   4e-06
gb|EOY32820.1| Chromatin remodeling complex subunit isoform 2 [T...    55   1e-05
gb|EOY32819.1| Chromatin remodeling complex subunit isoform 1 [T...    55   1e-05

>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = +3

Query: 9   VNRVHNSID---IDLNSSENDFEMKIDDHYQSDGEPDTNRLPNEVAINGGADMEPSTSHT 179
           ++RVH+S+    +D  SSE DFE K+D  YQSDG+ +   L NE A      +  S    
Sbjct: 26  IDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDTNDAGLQNEAAAADDIGLRISNLQP 85

Query: 180 YKRKSVGSAAKWGSVFWKGSQP 245
             R++   A KWGS FWK  QP
Sbjct: 86  SGRRT-AMAGKWGSTFWKDCQP 106


>emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]
          Length = 626

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = +3

Query: 9   VNRVHNSID---IDLNSSENDFEMKIDDHYQSDGEPDTNRLPNEVAINGGADMEPSTSHT 179
           ++RVH+S+    +D  SSE DFE K+D  YQSDG+ +   L NE A      +  S    
Sbjct: 67  IDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDTNDAGLQNEAAAADDIGLRISNLQP 126

Query: 180 YKRKSVGSAAKWGSVFWKGSQP 245
             R++   A KWGS FWK  QP
Sbjct: 127 SGRRT-AMAGKWGSTFWKDCQP 147


>ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, partial [Citrus
           clementina] gi|557548857|gb|ESR59486.1| hypothetical
           protein CICLE_v100140192mg, partial [Citrus clementina]
          Length = 572

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
 Frame = +3

Query: 9   VNRVHNSIDIDLNSSENDFEMKIDDHYQSDGEP-DTNRLPNEVAI--NGGA---DMEPST 170
           ++ V N  D+D    E DF++ +D  YQSDGEP D NRL NE A   +GG    +M+PS 
Sbjct: 29  ISSVGNEEDVDGTYGERDFDINMDVQYQSDGEPDDANRLQNEAAAVDHGGVRDLNMQPSG 88

Query: 171 SHTYKRKSVGSAAKWGSVFWKGSQP 245
             T        A +WGS FWK  QP
Sbjct: 89  RRT------ALAGRWGSTFWKDCQP 107


>dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
          Length = 1221

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +3

Query: 33  DIDLNSSENDFEMKIDDHYQSDGEPDTN-RLPNEVAINGGADMEPSTSH-TYKRKSVGSA 206
           D+D   SE  F+M +D  YQSD EP  + R PNE A++  AD  P  SH     K +G  
Sbjct: 37  DVDGTYSERGFDMNMDVQYQSDPEPGCSIRQPNETAVDNVAD--PVDSHYQSSTKRLGVT 94

Query: 207 AKWGSVFWKGSQP 245
            +WGS FWK  QP
Sbjct: 95  GRWGSTFWKDCQP 107


>ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
           gi|330251136|gb|AEC06230.1| chromatin remodeling 5
           [Arabidopsis thaliana]
          Length = 1724

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +3

Query: 33  DIDLNSSENDFEMKIDDHYQSDGEPDTN-RLPNEVAINGGADMEPSTSH-TYKRKSVGSA 206
           D+D   SE  F+M +D  YQSD EP  + R PNE A++  AD  P  SH     K +G  
Sbjct: 37  DVDGTYSERGFDMNMDVQYQSDPEPGCSIRQPNETAVDNVAD--PVDSHYQSSTKRLGVT 94

Query: 207 AKWGSVFWKGSQP 245
            +WGS FWK  QP
Sbjct: 95  GRWGSTFWKDCQP 107


>gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
           thaliana]
          Length = 1738

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +3

Query: 33  DIDLNSSENDFEMKIDDHYQSDGEPDTN-RLPNEVAINGGADMEPSTSH-TYKRKSVGSA 206
           D+D   SE  F+M +D  YQSD EP  + R PNE A++  AD  P  SH     K +G  
Sbjct: 37  DVDGTYSERGFDMNMDVQYQSDPEPGCSIRQPNETAVDNVAD--PVDSHYQSSTKRLGVT 94

Query: 207 AKWGSVFWKGSQP 245
            +WGS FWK  QP
Sbjct: 95  GRWGSTFWKDCQP 107


>ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
           X1 [Citrus sinensis] gi|568833055|ref|XP_006470733.1|
           PREDICTED: chromodomain-helicase-DNA-binding protein
           1-like isoform X2 [Citrus sinensis]
          Length = 1777

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
 Frame = +3

Query: 9   VNRVHNSIDIDLNSSENDFEMKIDDHYQSDGE-PDTNRLPNEVAI--NGG---ADMEPST 170
           ++ V N  D+D    E DF++ +D  YQSDGE  D NRL NE A   +GG    +++PS 
Sbjct: 29  ISSVGNEEDVDGTYGERDFDINMDVQYQSDGELDDANRLQNEAAAVDHGGMRDLNLQPSG 88

Query: 171 SHTYKRKSVGSAAKWGSVFWKGSQP 245
             T        A +WGS FWK  QP
Sbjct: 89  RRT------ALAGRWGSTFWKDCQP 107


>gb|EMJ15547.1| hypothetical protein PRUPE_ppa000116mg [Prunus persica]
          Length = 1761

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
 Frame = +3

Query: 6   TVNRVHNSI---DIDLNSSENDFEMKIDDHYQSDGE-PDTNRLPNEVAINGGADMEPSTS 173
           +V R+H+S    D+D+ S E +F+M +   YQS+GE  D +RL NE   + G     S  
Sbjct: 25  SVERIHSSTGNEDVDVISCEKEFDMNMHVQYQSEGEQDDASRLQNEAENDEGIGTRASNL 84

Query: 174 HTYKRKSVGSAAKWGSVFWKGSQP 245
            +  R+ +  A KWGS FWK  QP
Sbjct: 85  PSSGRR-MAVAGKWGSTFWKDCQP 107


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
           X1 [Glycine max] gi|571506899|ref|XP_006595768.1|
           PREDICTED: chromodomain-helicase-DNA-binding protein
           1-like isoform X2 [Glycine max]
          Length = 1764

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
 Frame = +3

Query: 12  NRVHNSID---IDLNSSENDFEMKIDDHYQSDGEPD-TNRLPNEVAINGGADMEPSTSHT 179
           NRVH S+     D  SSE +F+M ++  Y+SDGEPD ++RL  E   + G  ++ S   T
Sbjct: 27  NRVHRSVGNDCTDATSSEKEFDMNMEAQYESDGEPDGSSRLQTEATADDGDAVKESNLQT 86

Query: 180 YKRKSVGSAAKWGSVFWK 233
              K+     +WGS FWK
Sbjct: 87  TGSKT-AMVGRWGSTFWK 103


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223529287|gb|EEF31257.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 1718

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   HTVNRVHNSIDIDLNSSENDFEMKIDDHYQSDGEPDTNRLPNEVA-INGGADMEPSTSHT 179
           H + R+  S DI++ +SE +F+M +D  Y+S+GE D  R   + A  NGG  +  S    
Sbjct: 24  HRIGRMVGSEDIEVIASEREFDMNVDAQYESEGE-DAGRTEGDAAPDNGGVSVSNSYLQP 82

Query: 180 YKRKSVGSAAKWGSVFWKGSQP 245
             R++   A KWGS FWK  QP
Sbjct: 83  PGRRN--EAGKWGSSFWKDCQP 102


>ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Glycine max]
          Length = 1766

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
 Frame = +3

Query: 12  NRVHNSID---IDLNSSENDFEMKIDDHYQSDGEPD-TNRLPNEVAINGGADMEPSTSHT 179
           NRVH S+     D  SSE +F+M ++  Y SDGEPD ++RL  E   + G  ++ S   T
Sbjct: 27  NRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGEPDGSSRLQTEATADDGDAVKESNLQT 86

Query: 180 YKRKSVGSAAKWGSVFWK 233
              K+     +WGS FWK
Sbjct: 87  TGSKT-AMVGRWGSTFWK 103


>gb|EOY32820.1| Chromatin remodeling complex subunit isoform 2 [Theobroma cacao]
          Length = 1810

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = +3

Query: 9   VNRVHNSI---DIDLNSSENDFEMKIDDHYQSDGEP-DTNRLPNEVAINGGADMEPSTSH 176
           + R+H+++   D+D  + E +F++ +D  YQSDGEP D  RL NEV  +  A +  S   
Sbjct: 26  IGRIHSTVGNEDVD-GTYEREFDINMDAQYQSDGEPDDAVRLHNEVPADNVAGVSNSNFQ 84

Query: 177 TYKRKSVGSAAKWGSVFWKGSQP 245
              R+   +  KWGS FWK  QP
Sbjct: 85  PAGRRI--APGKWGSTFWKDCQP 105


>gb|EOY32819.1| Chromatin remodeling complex subunit isoform 1 [Theobroma cacao]
           gi|508785565|gb|EOY32821.1| Chromatin remodeling complex
           subunit isoform 1 [Theobroma cacao]
          Length = 1768

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = +3

Query: 9   VNRVHNSI---DIDLNSSENDFEMKIDDHYQSDGEP-DTNRLPNEVAINGGADMEPSTSH 176
           + R+H+++   D+D  + E +F++ +D  YQSDGEP D  RL NEV  +  A +  S   
Sbjct: 26  IGRIHSTVGNEDVD-GTYEREFDINMDAQYQSDGEPDDAVRLHNEVPADNVAGVSNSNFQ 84

Query: 177 TYKRKSVGSAAKWGSVFWKGSQP 245
              R+   +  KWGS FWK  QP
Sbjct: 85  PAGRRI--APGKWGSTFWKDCQP 105


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