BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00058080
         (1200 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP25222.1| RNA polymerase C2 [Phaulothamnus spinescens]           121   2e-36
gb|AEP25223.1| RNA polymerase C2 [Phytolacca americana]               121   2e-36
sp|Q33C48.1|RPOC2_NICTO RecName: Full=DNA-directed RNA polymeras...   120   5e-36
ref|YP_004891590.1| rpoC2 gene product (chloroplast) [Nicotiana ...   120   5e-36
ref|YP_398849.2| RNA polymerase beta'' subunit [Nicotiana toment...   120   5e-36
gb|AGW04277.1| RNA polymerase beta chain [Secamone afzelii]           120   5e-36
sp|P11704.1|RPOC2_SPIOL RecName: Full=DNA-directed RNA polymeras...   120   5e-36
ref|NP_054922.2| RNA polymerase beta'' subunit [Spinacia oleracea]    120   5e-36
gb|AEP25217.1| RNA polymerase C2 [Mirabilis jalapa]                   120   7e-36
ref|YP_008593101.1| DNA-directed RNA polymerase beta'' subunit (...   120   9e-36
ref|YP_008592923.1| DNA-directed RNA polymerase beta'' subunit (...   120   9e-36
ref|YP_007317238.1| RNA polymerase beta'' subunit (chloroplast) ...   120   9e-36
ref|YP_008520129.1| DNA-directed RNA polymerase beta'' subunit (...   120   9e-36
ref|YP_008963296.1| RNA polymerase beta' subunit [Camellia oleif...   120   9e-36
gb|AFK81289.1| RNA polymerase beta' subunit [Camellia sinensis v...   120   9e-36
gb|AFK81463.1| RNA polymerase beta' subunit [Camellia taliensis]      120   9e-36
ref|YP_008592836.1| DNA-directed RNA polymerase beta'' subunit (...   120   9e-36
gb|ABV65725.1| RNA polymerase beta'' subunit (chloroplast) [Corn...   120   1e-35
gb|AGJ51247.1| RNA polymerase beta'' subunit (chloroplast) [Sola...   120   1e-35
ref|YP_635629.1| RNA polymerase beta'' subunit [Solanum tuberosu...   120   1e-35

>gb|AEP25222.1| RNA polymerase C2 [Phaulothamnus spinescens]
          Length = 1133

 Score =  121 bits (304), Expect(2) = 2e-36
 Identities = 66/88 (75%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I YSTSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYSTSEYLRQEMNPNFRM 125



 Score = 58.9 bits (141), Expect(2) = 2e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>gb|AEP25223.1| RNA polymerase C2 [Phytolacca americana]
          Length = 1123

 Score =  121 bits (304), Expect(2) = 2e-36
 Identities = 66/88 (75%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I YSTSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYSTSEYLRQEMNPNFRM 125



 Score = 58.9 bits (141), Expect(2) = 2e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>sp|Q33C48.1|RPOC2_NICTO RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            gi|80750911|dbj|BAE47987.1| RNA polymerase beta'' subunit
            [Nicotiana tomentosiformis]
          Length = 1392

 Score =  120 bits (301), Expect(2) = 5e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.9 bits (141), Expect(2) = 5e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>ref|YP_004891590.1| rpoC2 gene product (chloroplast) [Nicotiana undulata]
            gi|347453891|gb|AEO95549.1| RNA polymerase beta'' subunit
            (chloroplast) [Nicotiana undulata]
            gi|347454002|gb|AEO95659.1| RNA polymerase beta'' subunit
            [synthetic construct]
          Length = 1392

 Score =  120 bits (301), Expect(2) = 5e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.9 bits (141), Expect(2) = 5e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>ref|YP_398849.2| RNA polymerase beta'' subunit [Nicotiana tomentosiformis]
          Length = 1388

 Score =  120 bits (301), Expect(2) = 5e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 34   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 93

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 94   VEKLRQSIEIWYATSEYLRQEMNPNFRM 121



 Score = 58.9 bits (141), Expect(2) = 5e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 2   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 37


>gb|AGW04277.1| RNA polymerase beta chain [Secamone afzelii]
          Length = 1380

 Score =  120 bits (301), Expect(2) = 5e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.9 bits (141), Expect(2) = 5e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>sp|P11704.1|RPOC2_SPIOL RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            gi|7636095|emb|CAB88715.1| RNA polymerase beta'' subunit
            [Spinacia oleracea]
          Length = 1361

 Score =  120 bits (301), Expect(2) = 5e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQ+KTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQLKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I YSTSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYSTSEYLRQEMNPNFRM 125



 Score = 58.9 bits (141), Expect(2) = 5e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>ref|NP_054922.2| RNA polymerase beta'' subunit [Spinacia oleracea]
          Length = 1357

 Score =  120 bits (301), Expect(2) = 5e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQ+KTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 34   YTSHILDQLKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 93

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I YSTSEYLRQEM+PNFRM
Sbjct: 94   VEKLRQSIEIWYSTSEYLRQEMNPNFRM 121



 Score = 58.9 bits (141), Expect(2) = 5e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 2   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 37


>gb|AEP25217.1| RNA polymerase C2 [Mirabilis jalapa]
          Length = 844

 Score =  120 bits (300), Expect(2) = 7e-36
 Identities = 65/88 (73%), Positives = 68/88 (77%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQS  LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I YSTSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYSTSEYLRQEMNPNFRM 125



 Score = 58.9 bits (141), Expect(2) = 7e-36
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>ref|YP_008593101.1| DNA-directed RNA polymerase beta'' subunit (chloroplast) [Camellia
            yunnanensis] gi|537362853|gb|AGU44656.1| DNA-directed RNA
            polymerase beta'' subunit (chloroplast) [Camellia
            yunnanensis]
          Length = 1378

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 41


>ref|YP_008592923.1| DNA-directed RNA polymerase beta'' subunit (chloroplast) [Camellia
            impressinervis] gi|537362583|gb|AGU44389.1| DNA-directed
            RNA polymerase beta'' subunit (chloroplast) [Camellia
            impressinervis]
          Length = 1378

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 41


>ref|YP_007317238.1| RNA polymerase beta'' subunit (chloroplast) [Camellia sinensis]
            gi|430728262|gb|AGA55586.1| RNA polymerase beta'' subunit
            (chloroplast) [Camellia sinensis]
          Length = 1378

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 41


>ref|YP_008520129.1| DNA-directed RNA polymerase beta'' subunit (chloroplast) [Camellia
            taliensis] gi|537362673|gb|AGU44478.1| DNA-directed RNA
            polymerase beta'' subunit (chloroplast) [Camellia
            taliensis] gi|537362943|gb|AGU44745.1| DNA-directed RNA
            polymerase beta'' subunit (chloroplast) [Camellia
            taliensis]
          Length = 1376

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 41


>ref|YP_008963296.1| RNA polymerase beta' subunit [Camellia oleifera]
            gi|388893285|gb|AFK81376.1| RNA polymerase beta' subunit
            [Camellia oleifera]
          Length = 1374

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 34   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 93

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 94   VEKLRQSIEIWYATSEYLRQEMNPNFRM 121



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 2   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 37


>gb|AFK81289.1| RNA polymerase beta' subunit [Camellia sinensis var. assamica]
          Length = 1374

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 34   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 93

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 94   VEKLRQSIEIWYATSEYLRQEMNPNFRM 121



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 2   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 37


>gb|AFK81463.1| RNA polymerase beta' subunit [Camellia taliensis]
          Length = 1372

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 34   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 93

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 94   VEKLRQSIEIWYATSEYLRQEMNPNFRM 121



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 2   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 37


>ref|YP_008592836.1| DNA-directed RNA polymerase beta'' subunit (chloroplast) [Camellia
            danzaiensis] gi|552546182|ref|YP_008593012.1|
            DNA-directed RNA polymerase beta'' subunit (chloroplast)
            [Camellia pitardii] gi|537362495|gb|AGU44302.1|
            DNA-directed RNA polymerase beta'' subunit (chloroplast)
            [Camellia danzaiensis] gi|537362763|gb|AGU44567.1|
            DNA-directed RNA polymerase beta'' subunit (chloroplast)
            [Camellia pitardii]
          Length = 1372

 Score =  120 bits (301), Expect(2) = 9e-36
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 58.2 bits (139), Expect(2) = 9e-36
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTSL---ISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT++   ISRLIDHFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRFISRLIDHFGMAYTSH 41


>gb|ABV65725.1| RNA polymerase beta'' subunit (chloroplast) [Cornus florida]
          Length = 1391

 Score =  120 bits (301), Expect(2) = 1e-35
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 57.8 bits (138), Expect(2) = 1e-35
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLV+HNKAIDGT+   LISRLIDHFGMAY +H
Sbjct: 6   AERANLVYHNKAIDGTAMKRLISRLIDHFGMAYTSH 41


>gb|AGJ51247.1| RNA polymerase beta'' subunit (chloroplast) [Solanum carolinense]
          Length = 1395

 Score =  120 bits (301), Expect(2) = 1e-35
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 57.4 bits (137), Expect(2) = 1e-35
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLI+HFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIEHFGMAYTSH 41


>ref|YP_635629.1| RNA polymerase beta'' subunit [Solanum tuberosum]
            gi|88656794|gb|ABD47047.1| RNA polymerase beta' subunit
            [Solanum tuberosum]
          Length = 1392

 Score =  120 bits (301), Expect(2) = 1e-35
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 14/88 (15%)
 Frame = +3

Query: 975  HTSHILDQVKTLGFQQAIATSISLRIDDLLTIPSKG*LVQDADQQSLTLEKHHHY----- 1139
            +TSHILDQVKTLGFQQA ATSISL IDDLLTIPSKG LVQDA+QQSL LEKHHHY     
Sbjct: 38   YTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHA 97

Query: 1140 ---------IRYSTSEYLRQEMDPNFRM 1196
                     I Y+TSEYLRQEM+PNFRM
Sbjct: 98   VEKLRQSIEIWYATSEYLRQEMNPNFRM 125



 Score = 57.4 bits (137), Expect(2) = 1e-35
 Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 3/36 (8%)
 Frame = +2

Query: 890 SERANLVFHNKAIDGTS---LISRLIDHFGMAYITH 988
           +ERANLVFHNKAIDGT+   LISRLI+HFGMAY +H
Sbjct: 6   AERANLVFHNKAIDGTAMKRLISRLIEHFGMAYTSH 41