BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00057995
         (363 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   134   2e-39
ref|XP_004252454.1| PREDICTED: uncharacterized protein LOC101254...   129   5e-37
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  110   6e-31
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              109   1e-30
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              109   1e-30
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              109   1e-30
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     107   1e-30
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              108   2e-30
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   103   3e-29
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   103   7e-29
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             105   7e-29
gb|AFB73912.1| polyprotein [Citrus sinensis]                          105   1e-28
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     100   4e-28
gb|ABG22123.1| polyprotein [Prunus avium]                             104   5e-28
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   100   6e-28
gb|ABG22121.1| polyprotein [Solanum melongena]                        104   6e-28
gb|AFB73911.1| polyprotein [Citrus sinensis]                          101   8e-28
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   100   8e-28
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         101   1e-27
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        101   2e-27

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  134 bits (336), Expect(2) = 2e-39
 Identities = 63/90 (70%), Positives = 76/90 (84%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A+KILGMEI RDR+++K FLSQ+SYIQK+L RFGMS++KP++TPS  N+HL+
Sbjct: 1014 FEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLT 1073

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
               AP S EEK YM +VPYASAVGSLMYAM
Sbjct: 1074 AMFAPQSEEEKEYMSRVPYASAVGSLMYAM 1103



 Score = 54.7 bits (130), Expect(2) = 2e-39
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AVSVVSRFM  PG+EHWQAVKRIFRYLR
Sbjct: 1113 AVSVVSRFMGQPGREHWQAVKRIFRYLR 1140


>ref|XP_004252454.1| PREDICTED: uncharacterized protein LOC101254576, partial [Solanum
           lycopersicum]
          Length = 538

 Score =  129 bits (325), Expect(2) = 5e-37
 Identities = 62/90 (68%), Positives = 76/90 (84%)
 Frame = -2

Query: 362 FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
           F+MKDLG A+K LGMEI RDR+++K FLSQ+SYIQK+L RFGMS++KP++TPS VN+HL+
Sbjct: 24  FDMKDLGAARKFLGMEIVRDRERRKIFLSQRSYIQKVLARFGMSSSKPVDTPSAVNIHLT 83

Query: 182 LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              AP S EEK YM +V YASAVGSLMYAM
Sbjct: 84  TMFAPQSEEEKEYMSRVFYASAVGSLMYAM 113



 Score = 50.4 bits (119), Expect(2) = 5e-37
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 85  AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
           AVSVVSRFM  PG+E WQAVKRIFRYLR
Sbjct: 123 AVSVVSRFMGQPGRELWQAVKRIFRYLR 150


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  110 bits (275), Expect(2) = 6e-31
 Identities = 54/90 (60%), Positives = 68/90 (75%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKDLG A KILGM+I+RDR  +K +LSQK+Y+QK+L RF M    P++TP  VN  LS
Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLS 1069

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
             S+ P S  E++ M +VPYASAVGSLMYAM
Sbjct: 1070 SSMIPSSEAERMEMSRVPYASAVGSLMYAM 1099



 Score = 49.3 bits (116), Expect(2) = 6e-31
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV  VSRFM +PGKEHW AVKRI RY+R
Sbjct: 1109 AVGTVSRFMADPGKEHWNAVKRILRYIR 1136


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  109 bits (272), Expect(2) = 1e-30
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKDLG A KILGM+I+RDR  +K +LSQK+Y++K+L RF M   KP++TP  VN  LS
Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLS 1069

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              ++P +  E++ M +VPYASAVGSLMYAM
Sbjct: 1070 SGMSPSNEAERMEMSRVPYASAVGSLMYAM 1099



 Score = 49.7 bits (117), Expect(2) = 1e-30
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSRFM +PGKEHW AVKRI RY++
Sbjct: 1109 AVGVVSRFMADPGKEHWNAVKRIMRYIK 1136


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  109 bits (272), Expect(2) = 1e-30
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKDLG A KILGM+I+RDR  +K +LSQK+Y++K+L RF M   KP++TP  VN  LS
Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLS 1069

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              ++P +  E++ M +VPYASAVGSLMYAM
Sbjct: 1070 SGMSPSNEAERMEMSRVPYASAVGSLMYAM 1099



 Score = 49.7 bits (117), Expect(2) = 1e-30
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSRFM +PGKEHW AVKRI RY++
Sbjct: 1109 AVGVVSRFMADPGKEHWNAVKRIMRYIK 1136


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  109 bits (272), Expect(2) = 1e-30
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKDLG A KILGM+I+RDR  +K +LSQK+Y++K+L RF M   KP++TP  VN  LS
Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLS 1069

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              ++P +  E++ M +VPYASAVGSLMYAM
Sbjct: 1070 SGMSPSNEAERMEMSRVPYASAVGSLMYAM 1099



 Score = 49.7 bits (117), Expect(2) = 1e-30
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSRFM +PGKEHW AVKRI RY++
Sbjct: 1109 AVGVVSRFMADPGKEHWNAVKRIMRYIK 1136


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  107 bits (268), Expect(2) = 1e-30
 Identities = 53/93 (56%), Positives = 65/93 (69%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A+KILGMEI R+R   K +LSQK YI+K+L RF M   KP++TP   +  LS
Sbjct: 1010 FEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLS 1069

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAMQTC 84
              L P+S  +  YM +VPY+SAVGSLMYAM  C
Sbjct: 1070 SDLCPLSDYDIEYMSRVPYSSAVGSLMYAMVCC 1102



 Score = 50.8 bits (120), Expect(2) = 1e-30
 Identities = 23/35 (65%), Positives = 29/35 (82%), Gaps = 4/35 (11%)
 Frame = -3

Query: 94   CKP----AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            C+P    A+SVV+R+M NPGKEHW+AV+ IFRYLR
Sbjct: 1102 CRPDLSHALSVVNRYMANPGKEHWKAVQWIFRYLR 1136


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  108 bits (269), Expect(2) = 2e-30
 Identities = 52/90 (57%), Positives = 68/90 (75%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKDLG A KILGM+I+RDR   K +LSQK+Y++K+L RF M   KP++TP  VN  LS
Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLS 1069

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              ++P +  E++ M +VPYASAVGSLMYAM
Sbjct: 1070 SGMSPSNEAERMEMSRVPYASAVGSLMYAM 1099



 Score = 49.7 bits (117), Expect(2) = 2e-30
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSRFM +PGKEHW AVKRI RY++
Sbjct: 1109 AVGVVSRFMADPGKEHWNAVKRIMRYIK 1136


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  103 bits (256), Expect(2) = 3e-29
 Identities = 52/90 (57%), Positives = 62/90 (68%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A+KILGMEI R R   K +LSQK YI+K+L RF M   KP++TP   +  LS
Sbjct: 1245 FEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLS 1304

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              L P S  +  YM +VPY+SAVGSLMYAM
Sbjct: 1305 SDLCPQSDYDIEYMSRVPYSSAVGSLMYAM 1334



 Score = 50.8 bits (120), Expect(2) = 3e-29
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            A+SVVSR+M NPGKEHW+AV+ IFRYLR
Sbjct: 1344 ALSVVSRYMANPGKEHWKAVQWIFRYLR 1371


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  103 bits (257), Expect(2) = 7e-29
 Identities = 50/90 (55%), Positives = 67/90 (74%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKDLG AQ+ILGM+I R+R  +K +LSQ+ YI+++L RF M   KP++TP   ++ LS
Sbjct: 1033 FDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLS 1092

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              + P + EEK  M KVPY+SAVGSLMYAM
Sbjct: 1093 KKMCPTTVEEKGNMAKVPYSSAVGSLMYAM 1122



 Score = 49.3 bits (116), Expect(2) = 7e-29
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSRF+ NPGKEHW+AVK I RYLR
Sbjct: 1132 AVGVVSRFLENPGKEHWEAVKWILRYLR 1159


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  105 bits (261), Expect(2) = 7e-29
 Identities = 50/90 (55%), Positives = 69/90 (76%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A KILGM+I+RDR  +K +LSQK+Y++KIL RF M   K ++TP  +N+ +S
Sbjct: 1003 FEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVS 1062

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
             S++P + E ++ M +VPYASAVGSLM+AM
Sbjct: 1063 SSMSPSNEEGRMEMSRVPYASAVGSLMFAM 1092



 Score = 47.8 bits (112), Expect(2) = 7e-29
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSR+M NPG+EHW  VKRI RY++
Sbjct: 1102 AVGVVSRYMANPGREHWNCVKRILRYIK 1129


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  105 bits (263), Expect(2) = 1e-28
 Identities = 52/90 (57%), Positives = 67/90 (74%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A KILGM+I+RDR+ +K +LSQK+Y++KIL RF M   K ++TP  VN  LS
Sbjct: 1014 FEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPLPVNFKLS 1073

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
             S+ P +  E+  M +VPYASAVGSLM+AM
Sbjct: 1074 SSMCPSNEAERKEMSRVPYASAVGSLMFAM 1103



 Score = 46.2 bits (108), Expect(2) = 1e-28
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV  VSR+M NPG EHW AVKRI RY+R
Sbjct: 1113 AVGAVSRYMANPGGEHWIAVKRILRYIR 1140


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 99.8 bits (247), Expect(2) = 4e-28
 Identities = 51/90 (56%), Positives = 62/90 (68%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A+KILGMEI R+R   K +LSQK YI+K+LHRF M   K ++T    +  LS
Sbjct: 947  FEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAHFRLS 1006

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              L P SA +  YM +VPY+SAV SLMYAM
Sbjct: 1007 SDLCPQSAYDIEYMSRVPYSSAVSSLMYAM 1036



 Score = 50.8 bits (120), Expect(2) = 4e-28
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            A+SVVSR+M NPGKEHW+AV+ IFRYLR
Sbjct: 1046 ALSVVSRYMANPGKEHWKAVQWIFRYLR 1073


>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score =  104 bits (259), Expect(2) = 5e-28
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -2

Query: 362 FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMS-TTKPLNTPSTVNVHL 186
           F MKDLG A+KILGMEI RDR K K  L QK Y++K+L RFGM+  +KP++TP   +  L
Sbjct: 26  FEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQRFGMNENSKPVSTPLAPHFKL 85

Query: 185 SLSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
           S S++P + EE  YM ++PYASAVGSLMYAM
Sbjct: 86  SASMSPNTDEESHYMAQIPYASAVGSLMYAM 116



 Score = 45.8 bits (107), Expect(2) = 5e-28
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = -3

Query: 85  AVSVVSRFMVNPGKEHWQAVKRIFRYL 5
           AVS+VSR+M NPGK HWQAVK I RY+
Sbjct: 126 AVSIVSRYMHNPGKGHWQAVKWILRYI 152


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  100 bits (248), Expect(2) = 6e-28
 Identities = 51/90 (56%), Positives = 64/90 (71%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKDLG A+KILGMEI RDR+    FLSQ+SYI+K+L RF M   KP++TP   +  LS
Sbjct: 1028 FDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLS 1087

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
                  + E+  YM +VPY+SAVGSLMYAM
Sbjct: 1088 ALQCASTDEDVEYMSRVPYSSAVGSLMYAM 1117



 Score = 49.7 bits (117), Expect(2) = 6e-28
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            A+S+VSR+M NPGKEHW+AV+ IFRYLR
Sbjct: 1127 AMSLVSRYMANPGKEHWKAVQWIFRYLR 1154


>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score =  104 bits (260), Expect(2) = 6e-28
 Identities = 53/91 (58%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
 Frame = -2

Query: 362 FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMS-TTKPLNTPSTVNVHL 186
           F MKDLG A+KILGMEI RDR + K  L+QK Y++K+L RFG++  +KP++TP   ++ L
Sbjct: 111 FEMKDLGEAKKILGMEISRDRQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPHLKL 170

Query: 185 SLSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
           S  L+P + EE+ YM KVPYA+AVGSLMYAM
Sbjct: 171 SSQLSPKTDEEREYMAKVPYANAVGSLMYAM 201



 Score = 45.1 bits (105), Expect(2) = 6e-28
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -3

Query: 85  AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
           AVSVVSR+M +PGK HWQAVK I RY++
Sbjct: 211 AVSVVSRYMHDPGKGHWQAVKWILRYIK 238


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  101 bits (252), Expect(2) = 8e-28
 Identities = 51/90 (56%), Positives = 65/90 (72%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A KILGM+I+RDR+  K +LSQK+Y++KIL RF M   K ++T   VN  LS
Sbjct: 1014 FEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKKILRRFNMQDCKSISTSLPVNFKLS 1073

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
             S+ P +  E+  M +VPYASAVGSLM+AM
Sbjct: 1074 SSMCPSNEAERKEMSRVPYASAVGSLMFAM 1103



 Score = 47.8 bits (112), Expect(2) = 8e-28
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSR+M NPG EHW AVKRI RY+R
Sbjct: 1113 AVGVVSRYMANPGGEHWIAVKRILRYIR 1140


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score =  100 bits (249), Expect(2) = 8e-28
 Identities = 49/90 (54%), Positives = 62/90 (68%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A+KILG+EI ++R   K +LSQK YI+K+L RF M   KP++TP   +  LS
Sbjct: 844  FEMKDLGAAKKILGIEITKERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLS 903

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              L P S  +  YM +VPY+S VGSLMYAM
Sbjct: 904  SDLCPQSDYDIEYMSRVPYSSVVGSLMYAM 933



 Score = 48.9 bits (115), Expect(2) = 8e-28
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYL 5
            A+SVVSR+M NPGKEHW+AV+ IFRYL
Sbjct: 943  ALSVVSRYMANPGKEHWKAVQWIFRYL 969


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  101 bits (251), Expect(2) = 1e-27
 Identities = 49/90 (54%), Positives = 67/90 (74%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F+MKD+G A++ILGM+I RDR  KK +LSQ+ YI+K+L RF M+  KP++TP  ++  L 
Sbjct: 1031 FSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLC 1090

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
                P S +EK  M++VPY+SAVGSLMYAM
Sbjct: 1091 KKQCPSSEKEKEEMQRVPYSSAVGSLMYAM 1120



 Score = 47.4 bits (111), Expect(2) = 1e-27
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYLR 2
            AV VVSRF+ NPG+EHW AVK I RYLR
Sbjct: 1130 AVGVVSRFLSNPGREHWDAVKWILRYLR 1157


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  101 bits (252), Expect(2) = 2e-27
 Identities = 51/90 (56%), Positives = 61/90 (67%)
 Frame = -2

Query: 362  FNMKDLGGAQKILGMEIYRDRDKKKFFLSQKSYIQKILHRFGMSTTKPLNTPSTVNVHLS 183
            F MKDLG A+KILGMEI R+R   K +LSQK YI+K+  RF M   KP++TP   +  LS
Sbjct: 887  FEMKDLGVAKKILGMEITRERHSDKLYLSQKGYIEKVFRRFNMHDAKPVSTPLAAHFRLS 946

Query: 182  LSLAPMSAEEKVYMEKVPYASAVGSLMYAM 93
              L P S     YM +VPY+SAVGSLMYAM
Sbjct: 947  SDLCPQSDYNIEYMSRVPYSSAVGSLMYAM 976



 Score = 46.6 bits (109), Expect(2) = 2e-27
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = -3

Query: 85   AVSVVSRFMVNPGKEHWQAVKRIFRYL 5
            A+SVVSR+M NPGKEHW+ V+ IFRYL
Sbjct: 986  ALSVVSRYMANPGKEHWKDVQWIFRYL 1012