BLASTX nr result
ID: Achyranthes22_contig00057841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00057841
(325 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 67 6e-20
gb|ADB27477.1| gag-pol polyprotein [Nassella trichotoma] 64 2e-19
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 67 2e-19
gb|AAX14648.1| gag-pol polyprotein [Cenchrus compressus] 66 7e-19
gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Ja... 64 9e-19
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc... 64 9e-19
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap... 64 9e-19
ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759... 64 9e-19
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 66 1e-18
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 64 1e-18
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 65 1e-18
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 65 1e-18
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 64 1e-18
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 64 1e-18
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 64 1e-18
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 64 2e-18
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 64 3e-18
gb|ABC49720.1| gag-pol polyprotein [Fargesia robusta] 63 3e-18
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 63 4e-18
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 63 4e-18
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 67.0 bits (162), Expect(2) = 6e-20
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + DVF E+P+ LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 689 QEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 732
Score = 55.8 bits (133), Expect(2) = 6e-20
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP +LVPKKD TWRM
Sbjct: 738 QRQVQELLDKGYVRESLSPCAVPVILVPKKDGTWRM 773
>gb|ADB27477.1| gag-pol polyprotein [Nassella trichotoma]
Length = 223
Score = 64.3 bits (155), Expect(2) = 2e-19
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPKG 222
Q F DVF ++P LP +RGIE+QIDLIP ASLPN+ PYR NP+G
Sbjct: 135 QEFADVFPPDVPPGLPPVRGIEHQIDLIPSASLPNRAPYRTNPEG 179
Score = 57.0 bits (136), Expect(2) = 2e-19
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP +LVPKKDE+WRM
Sbjct: 184 QRQVQELLDKGYVRESLSPCAVPVILVPKKDESWRM 219
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 67.4 bits (163), Expect(2) = 2e-19
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + DVF E+P LPL+RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 780 QEYSDVFPKEVPPGLPLVRGIEHQIDLIPGASLPNRAPYRTNPE 823
Score = 53.5 bits (127), Expect(2) = 2e-19
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR + EL+ G VRES SPCAVP +LVPKKD +WRM
Sbjct: 829 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRM 864
>gb|AAX14648.1| gag-pol polyprotein [Cenchrus compressus]
Length = 207
Score = 65.9 bits (159), Expect(2) = 7e-19
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + DVF E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 119 QEYSDVFPSEIPAGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 162
Score = 53.5 bits (127), Expect(2) = 7e-19
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP +LVPKKD WRM
Sbjct: 168 QRQVQELLDKGYVRESLSPCAVPVILVPKKDGXWRM 203
>gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1450
Score = 63.9 bits (154), Expect(2) = 9e-19
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 621 QEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 664
Score = 55.1 bits (131), Expect(2) = 9e-19
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP LLVPKKD +WRM
Sbjct: 670 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRM 705
>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1392
Score = 63.9 bits (154), Expect(2) = 9e-19
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 563 QEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 606
Score = 55.1 bits (131), Expect(2) = 9e-19
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP LLVPKKD +WRM
Sbjct: 612 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRM 647
>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
Length = 1357
Score = 63.9 bits (154), Expect(2) = 9e-19
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 528 QEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 571
Score = 55.1 bits (131), Expect(2) = 9e-19
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP LLVPKKD +WRM
Sbjct: 577 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRM 612
>ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759439 [Setaria italica]
Length = 696
Score = 63.9 bits (154), Expect(2) = 9e-19
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F +E+P LP RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 321 QEYADIFPNEVPPGLPPTRGIEHQIDLIPGASLPNRAPYRTNPE 364
Score = 55.1 bits (131), Expect(2) = 9e-19
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP LLVPKKD +WRM
Sbjct: 370 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRM 405
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 65.9 bits (159), Expect(2) = 1e-18
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q++EDVF +ELP LP LRGIE+QID IPGA+LPNK YR +PK
Sbjct: 572 QSYEDVFPNELPSGLPPLRGIEHQIDFIPGATLPNKAAYRSDPK 615
Score = 52.8 bits (125), Expect(2) = 1e-18
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
Q+ I EL+ G VRES SPC+VPALLVPKKD +WRM
Sbjct: 621 QQQIGELVSKGFVRESLSPCSVPALLVPKKDGSWRM 656
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 63.5 bits (153), Expect(2) = 1e-18
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +1
Query: 94 FEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
+ D+F+ E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 494 YADIFSKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 535
Score = 55.1 bits (131), Expect(2) = 1e-18
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP LLVPKKD +WRM
Sbjct: 541 QRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRM 576
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 64.7 bits (156), Expect(2) = 1e-18
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + DVF E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 686 QEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPE 729
Score = 53.5 bits (127), Expect(2) = 1e-18
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR + EL+ G VRES SPCAVP +LVPKKD +WRM
Sbjct: 735 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRM 770
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 64.7 bits (156), Expect(2) = 1e-18
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + DVF E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 665 QEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPE 708
Score = 53.5 bits (127), Expect(2) = 1e-18
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR + EL+ G VRES SPCAVP +LVPKKD +WRM
Sbjct: 714 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRM 749
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 64.3 bits (155), Expect(2) = 1e-18
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 610 QEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 653
Score = 53.9 bits (128), Expect(2) = 1e-18
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPC+VP LLVPKKD +WRM
Sbjct: 659 QRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRM 694
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 64.3 bits (155), Expect(2) = 1e-18
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 714 QEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 757
Score = 53.9 bits (128), Expect(2) = 1e-18
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPC+VP LLVPKKD +WRM
Sbjct: 763 QRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRM 798
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 64.3 bits (155), Expect(2) = 1e-18
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 714 QEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 757
Score = 53.9 bits (128), Expect(2) = 1e-18
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPC+VP LLVPKKD +WRM
Sbjct: 763 QRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRM 798
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 64.3 bits (155), Expect(2) = 2e-18
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 714 QEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 757
Score = 53.5 bits (127), Expect(2) = 2e-18
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPC++P LLVPKKD +WRM
Sbjct: 763 QRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRM 798
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 64.3 bits (155), Expect(2) = 3e-18
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + D+F E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 347 QEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPE 390
Score = 53.1 bits (126), Expect(2) = 3e-18
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPC+VP LLVPKKD +WRM
Sbjct: 396 QRQMQELLDKGYVRESLSPCSVPVLLVPKKDGSWRM 431
>gb|ABC49720.1| gag-pol polyprotein [Fargesia robusta]
Length = 222
Score = 62.8 bits (151), Expect(2) = 3e-18
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 88 QAFEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
Q + DVF ++P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 136 QEYMDVFPKDVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPE 179
Score = 54.3 bits (129), Expect(2) = 3e-18
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR ++EL+ G VRES SPCAVP +LVPKKD +WRM
Sbjct: 185 QRQVQELLDKGYVRESLSPCAVPVILVPKKDGSWRM 220
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 63.2 bits (152), Expect(2) = 4e-18
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +1
Query: 94 FEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
+ DVF E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 1030 YSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPE 1071
Score = 53.5 bits (127), Expect(2) = 4e-18
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR + EL+ G VRES SPCAVP +LVPKKD +WRM
Sbjct: 1077 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRM 1112
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 63.2 bits (152), Expect(2) = 4e-18
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +1
Query: 94 FEDVFTDELPQRLPLLRGIEYQIDLIPGASLPNKPPYRCNPK 219
+ DVF E+P LP +RGIE+QIDLIPGASLPN+ PYR NP+
Sbjct: 1021 YSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPE 1062
Score = 53.5 bits (127), Expect(2) = 4e-18
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 216 QRLIEELMKIGVVRESKSPCAVPALLVPKKDETWRM 323
QR + EL+ G VRES SPCAVP +LVPKKD +WRM
Sbjct: 1068 QRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRM 1103