BLASTX nr result

ID: Achyranthes22_contig00057423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00057423
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521871.1| brg-1 associated factor, putative [Ricinus c...    56   6e-06
ref|XP_002298619.1| SWIB complex BAF60b domain-containing family...    56   6e-06
ref|XP_006447079.1| hypothetical protein CICLE_v10014820mg [Citr...    55   1e-05
ref|XP_004489606.1| PREDICTED: SWI/SNF complex component SNF12 h...    55   1e-05

>ref|XP_002521871.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223538909|gb|EEF40507.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 572

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/85 (49%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = -2

Query: 269 SAIRKIHEHRRMD-LFLSFSR*HMEFINALIK*-FHFLKIR*SEQGNIH*KIMWNSFFDS 96
           SAIRKIHEHRR    FL FS+  +EFINALI+     LK+   E      K     FF+ 
Sbjct: 488 SAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVAGEGSRSAEKERRADFFNQ 547

Query: 95  --VEDVVIRYLTCKPPSAPDGPRST 27
             VED VIRYL  KP +  D P ST
Sbjct: 548 PWVEDAVIRYLNRKPTAGSDAPGST 572


>ref|XP_002298619.1| SWIB complex BAF60b domain-containing family protein [Populus
           trichocarpa] gi|222845877|gb|EEE83424.1| SWIB complex
           BAF60b domain-containing family protein [Populus
           trichocarpa]
          Length = 555

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -2

Query: 269 SAIRKIHEHRRMD-LFLSFSR*HMEFINALIK*-FHFLKIR*SEQGNIH*KIMWNSFFDS 96
           +AIRKIHEHRR    FL FS+  +EF+NALI+     LK+   E      K   + FF+ 
Sbjct: 471 TAIRKIHEHRRRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQ 530

Query: 95  --VEDVVIRYLTCKPPSAPDGPRS 30
             VED VIRYL  KP +  D PRS
Sbjct: 531 PWVEDAVIRYLNRKPAAGSDAPRS 554


>ref|XP_006447079.1| hypothetical protein CICLE_v10014820mg [Citrus clementina]
           gi|568831605|ref|XP_006470052.1| PREDICTED: SWI/SNF
           complex component SNF12 homolog isoform X1 [Citrus
           sinensis] gi|568831607|ref|XP_006470053.1| PREDICTED:
           SWI/SNF complex component SNF12 homolog isoform X2
           [Citrus sinensis] gi|557549690|gb|ESR60319.1|
           hypothetical protein CICLE_v10014820mg [Citrus
           clementina]
          Length = 545

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/85 (48%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = -2

Query: 269 SAIRKIHEHRRMD-LFLSFSR*HMEFINALIK*-FHFLKIR*SEQGNIH*KIMWNSFFDS 96
           SAIRKIHEHRR    FL FS+  +EFIN LI+     LK+   E      K   + FF+ 
Sbjct: 461 SAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQSKDLKLVAGEGSRSAEKERRSDFFNQ 520

Query: 95  --VEDVVIRYLTCKPPSAPDGPRST 27
             VED VIRYL  KP +  D P ST
Sbjct: 521 PWVEDAVIRYLNRKPAAGSDAPGST 545


>ref|XP_004489606.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1
           [Cicer arietinum] gi|502091676|ref|XP_004489607.1|
           PREDICTED: SWI/SNF complex component SNF12 homolog
           isoform X2 [Cicer arietinum]
           gi|502091680|ref|XP_004489608.1| PREDICTED: SWI/SNF
           complex component SNF12 homolog isoform X3 [Cicer
           arietinum]
          Length = 550

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 40/83 (48%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -2

Query: 263 IRKIHEHRRMD-LFLSFSR*HMEFINALIK*-FHFLKIR*SEQGNIH*KIMWNSFFDS-- 96
           IRKIHEHRR    FL FS+  +EFINALI+     LK+   E      K   + FF+   
Sbjct: 468 IRKIHEHRRRRAFFLGFSQSPVEFINALIESQSKDLKVAAGEPSRNAEKERGSEFFNQPW 527

Query: 95  VEDVVIRYLTCKPPSAPDGPRST 27
           VED VIRYL  KP +  D P ST
Sbjct: 528 VEDAVIRYLNRKPAAGSDAPGST 550


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