BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00055761
         (793 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22283.3| unnamed protein product [Vitis vinifera]              360   4e-97
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi...   360   4e-97
gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, put...   351   2e-94
ref|XP_006482700.1| PREDICTED: pentatricopeptide repeat-containi...   346   6e-93
ref|XP_006431232.1| hypothetical protein CICLE_v10011344mg [Citr...   344   2e-92
ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Popu...   334   2e-89
gb|EMJ16149.1| hypothetical protein PRUPE_ppa003127mg [Prunus pe...   334   2e-89
gb|EXB77627.1| hypothetical protein L484_018143 [Morus notabilis]     328   1e-87
ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containi...   320   3e-85
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi...   320   5e-85
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi...   319   8e-85
ref|XP_006395288.1| hypothetical protein EUTSA_v10003982mg [Eutr...   310   3e-82
ref|NP_189575.2| pentatricopeptide repeat-containing protein EMB...   310   3e-82
dbj|BAB03125.1| unnamed protein product [Arabidopsis thaliana]        310   3e-82
ref|XP_002875507.1| hypothetical protein ARALYDRAFT_484700 [Arab...   307   3e-81
ref|XP_006293002.1| hypothetical protein CARUB_v10019279mg [Caps...   298   2e-78
ref|XP_006338389.1| PREDICTED: pentatricopeptide repeat-containi...   291   2e-76
ref|XP_004232179.1| PREDICTED: pentatricopeptide repeat-containi...   290   4e-76
ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containi...   276   5e-72
ref|XP_006837037.1| hypothetical protein AMTR_s00110p00040270 [A...   276   8e-72

>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  360 bits (923), Expect = 4e-97
 Identities = 179/261 (68%), Positives = 218/261 (83%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            L+PG DAM AIIGA +KE KW LA +VFQ+ML+ GLKPNLIACNALINS+G++G +K AF
Sbjct: 354  LKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAF 413

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            +VY  +K L HTPD YTWNALLGA YRANQ+A+ALH F++I +E S + NL LYN+ALM 
Sbjct: 414  RVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESI-REQSSQVNLHLYNTALMS 472

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG W++ALQ+LW ME S +SVS ASYN+VIGACEVARKP+IALQVYEHM+ +QCTPD
Sbjct: 473  CQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPD 532

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FTHLSLIRSCIWG LW +V+ IL +  T +VSLYNAAIQGMCL+G+ ES K+LY+RMR 
Sbjct: 533  TFTHLSLIRSCIWGSLWAEVKEILNRAGT-DVSLYNAAIQGMCLRGKIESAKKLYMRMRK 591

Query: 722  MGLIPDGKTRALMLQFMHQNS 784
             GL PDGKTRALMLQ + +++
Sbjct: 592  SGLKPDGKTRALMLQNLQKDA 612



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K      +++TM   GL+P+  ACN+L++ L R   L +A +V++ +K  E T   
Sbjct: 192 SRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESMKANEST-TG 250

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQL--YNSALMCCQRLGFWDKALQI 400
           ++++ +L A      Y +AL  F  ++ E  VK +  +  Y + +  C ++  W +  +I
Sbjct: 251 HSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERI 310

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
              M+ + +  +I +Y +++       + ++A+  Y  M+     P      ++I +C  
Sbjct: 311 WRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAK 370

Query: 581 GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
              WD      +++L   L PN+   NA I  +   G  +   R+Y  M+ +G  PD  T
Sbjct: 371 EGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSLGHTPDVYT 430

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 431 WNALLGALYR 440


>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            [Vitis vinifera]
          Length = 546

 Score =  360 bits (923), Expect = 4e-97
 Identities = 179/261 (68%), Positives = 218/261 (83%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            L+PG DAM AIIGA +KE KW LA +VFQ+ML+ GLKPNLIACNALINS+G++G +K AF
Sbjct: 274  LKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAF 333

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            +VY  +K L HTPD YTWNALLGA YRANQ+A+ALH F++I +E S + NL LYN+ALM 
Sbjct: 334  RVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESI-REQSSQVNLHLYNTALMS 392

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG W++ALQ+LW ME S +SVS ASYN+VIGACEVARKP+IALQVYEHM+ +QCTPD
Sbjct: 393  CQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPD 452

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FTHLSLIRSCIWG LW +V+ IL +  T +VSLYNAAIQGMCL+G+ ES K+LY+RMR 
Sbjct: 453  TFTHLSLIRSCIWGSLWAEVKEILNRAGT-DVSLYNAAIQGMCLRGKIESAKKLYMRMRK 511

Query: 722  MGLIPDGKTRALMLQFMHQNS 784
             GL PDGKTRALMLQ + +++
Sbjct: 512  SGLKPDGKTRALMLQNLQKDA 532



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K      +++TM   GL+P+  ACN+L++ L R   L +A +V++ +K  E T   
Sbjct: 112 SRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESMKANEST-TG 170

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQL--YNSALMCCQRLGFWDKALQI 400
           ++++ +L A      Y +AL  F  ++ E  VK +  +  Y + +  C ++  W +  +I
Sbjct: 171 HSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERI 230

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
              M+ + +  +I +Y +++       + ++A+  Y  M+     P      ++I +C  
Sbjct: 231 WRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAK 290

Query: 581 GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
              WD      +++L   L PN+   NA I  +   G  +   R+Y  M+ +G  PD  T
Sbjct: 291 EGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSLGHTPDVYT 350

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 351 WNALLGALYR 360


>gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
            [Theobroma cacao] gi|508711704|gb|EOY03601.1|
            Pentatricopeptide repeat superfamily protein, putative
            isoform 1 [Theobroma cacao]
          Length = 619

 Score =  351 bits (900), Expect = 2e-94
 Identities = 169/260 (65%), Positives = 211/260 (81%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            LEP  D MHA+I A +KEEKW LA ++FQ +L+ GLKPN +ACNALINSLG+AG+++ AF
Sbjct: 350  LEPRDDTMHAVISACTKEEKWDLALSIFQKILNDGLKPNPVACNALINSLGKAGEVRLAF 409

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            K+Y  +K L HTPD++TWN+LLGA YRANQYA+ALH F+ I+K+ S+  N+ LYN+ALM 
Sbjct: 410  KIYDIMKSLGHTPDAFTWNSLLGALYRANQYADALHLFERIRKQSSLA-NVHLYNTALMS 468

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG WD+ALQ+LW ME S + VS ASYN+VI ACE ARKPK+ALQVY+HM+H++C PD
Sbjct: 469  CQKLGLWDRALQLLWQMEASGLLVSTASYNLVISACETARKPKVALQVYDHMIHQKCVPD 528

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FTHLSLIRSCIWG LW +VE IL + +  NVSLYNA I GMCLKG+ ES K+LY+RMR 
Sbjct: 529  TFTHLSLIRSCIWGSLWAEVEEILNR-VPENVSLYNAVIHGMCLKGKVESAKKLYMRMRK 587

Query: 722  MGLIPDGKTRALMLQFMHQN 781
             GL PDGKTRALMLQ + ++
Sbjct: 588  NGLKPDGKTRALMLQNLRKD 607



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 8/242 (3%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  + ++M   GL+P+  ACN+L++ L R G + +A + ++ +K  E     
Sbjct: 188 SRSNKVRSALELCRSMKLSGLQPSAHACNSLLSCLLRNGLVDDALRTFEFMKANELIT-G 246

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQL--YNSALMCCQRLGFWDKALQI 400
           +T++ +L A         AL  F  +++++  K    +  YN+AL  C R   W +  ++
Sbjct: 247 HTYSLILKAIADTQGCDAALDMFAELERDYEQKKGFDVIVYNTALSICGRWNNWVETERV 306

Query: 401 LW--IMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSC 574
            W  I+EN      + +Y++++       + ++AL  Y+ M+     P + T  ++I +C
Sbjct: 307 -WRRILENGYSGTQV-TYSLLVSIFVRCNQNELALDAYDEMIRNGLEPRDDTMHAVISAC 364

Query: 575 IWGDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDG 742
              + WD      + IL   L PN    NA I  +   G      ++Y  M+ +G  PD 
Sbjct: 365 TKEEKWDLALSIFQKILNDGLKPNPVACNALINSLGKAGEVRLAFKIYDIMKSLGHTPDA 424

Query: 743 KT 748
            T
Sbjct: 425 FT 426


>ref|XP_006482700.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            [Citrus sinensis]
          Length = 592

 Score =  346 bits (887), Expect = 6e-93
 Identities = 167/255 (65%), Positives = 207/255 (81%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            LEPG D   A+IG+ ++E KW LA N+F+ ML+  LKPNLI+CNALINSLG+AG++K AF
Sbjct: 334  LEPGDDVTQAVIGSCTREGKWDLALNLFENMLNGRLKPNLISCNALINSLGKAGEVKLAF 393

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            KV+  IK L HTPD YTWN LL A Y+ANQ+A+AL  F++I+ E S + N+ LYN+ALM 
Sbjct: 394  KVHGIIKILGHTPDVYTWNGLLTALYKANQHADALQLFESIKTEQSSELNVHLYNTALMA 453

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG W+K+LQ+LW ME SE+ VS +SYNIVI ACE+ARKPKIALQVYEHM+H++CTPD
Sbjct: 454  CQKLGLWEKSLQLLWQMETSELPVSTSSYNIVIHACEIARKPKIALQVYEHMVHRKCTPD 513

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
              T+LSLIR CIWG LW +VE IL  E+ P+VSLYNA IQGMCL+G+ ES K+LY RMR+
Sbjct: 514  TLTYLSLIRGCIWGSLWAEVEEIL--EVAPDVSLYNAVIQGMCLRGKFESAKKLYTRMRE 571

Query: 722  MGLIPDGKTRALMLQ 766
            +GL PDGKTRALMLQ
Sbjct: 572  IGLKPDGKTRALMLQ 586



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 57/237 (24%), Positives = 112/237 (47%), Gaps = 6/237 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  ++++M   GL+PN+ ACN+L++ L R G L  A +V++ ++  E T   
Sbjct: 172 SRSNKVRSALELYESMKCSGLQPNVHACNSLLSCLIRNGLLDYALRVFEFMRTNEITM-G 230

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQ--LYNSALMCCQRLGFWDKALQI 400
           ++++ +L A   A  + +AL  F         K +    +YN+ +  C R+  W +  ++
Sbjct: 231 HSYSLILKAVEHAQGFDSALDMFVGFGGYSRQKKDFDVIVYNTMISVCGRVNNWIETEKL 290

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
              M+   +  +  +Y++++       + ++AL  Y  M+     P +    ++I SC  
Sbjct: 291 WRSMKEDGLIGTRVTYSLLVCIFARCSQNELALDAYNEMIQNGLEPGDDVTQAVIGSCTR 350

Query: 581 GDLWDDV----ENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPD 739
              WD      EN+L   L PN+   NA I  +   G  +   +++  ++ +G  PD
Sbjct: 351 EGKWDLALNLFENMLNGRLKPNLISCNALINSLGKAGEVKLAFKVHGIIKILGHTPD 407


>ref|XP_006431232.1| hypothetical protein CICLE_v10011344mg [Citrus clementina]
            gi|557533289|gb|ESR44472.1| hypothetical protein
            CICLE_v10011344mg [Citrus clementina]
          Length = 591

 Score =  344 bits (882), Expect = 2e-92
 Identities = 166/255 (65%), Positives = 206/255 (80%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            LEPG D   A+IG+ ++E KW LA N+F+ ML+  LKPNLI+CNALINSLG+AG++K AF
Sbjct: 333  LEPGDDVTQAVIGSCTREGKWDLALNLFENMLNGRLKPNLISCNALINSLGKAGEVKLAF 392

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            KV+  IK L HTPD YTWN LL A Y+ANQ+A+AL  F++I+ E S + N+ LYN+ALM 
Sbjct: 393  KVHGIIKILGHTPDVYTWNGLLTALYKANQHADALQLFESIKTEQSSELNVHLYNTALMA 452

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG W+K+LQ+LW ME SE+ VS +SYNIVI ACE+ARKPKIALQVYEHM+H++CTPD
Sbjct: 453  CQKLGLWEKSLQLLWQMETSELPVSTSSYNIVIHACEIARKPKIALQVYEHMVHRKCTPD 512

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
              T+LSLIR CIWG LW +VE IL  E+ P+VSLYNA IQGMCL+G+ ES K++Y RMR+
Sbjct: 513  TLTYLSLIRGCIWGSLWAEVEEIL--EVAPDVSLYNAVIQGMCLRGKFESAKKVYTRMRE 570

Query: 722  MGLIPDGKTRALMLQ 766
             GL PDGKTRALMLQ
Sbjct: 571  SGLKPDGKTRALMLQ 585



 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 57/237 (24%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  ++++M   GL+PN+ ACN+L++ L R G L  A +V++ ++  E T   
Sbjct: 171 SRSNKVRSALELYESMKCSGLQPNVHACNSLLSCLIRNGLLDYALRVFEFMRTNEIT-TG 229

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQ--LYNSALMCCQRLGFWDKALQI 400
           ++++ +L A   A  + +AL  F         K +    +YN+ +  C R+  W + +++
Sbjct: 230 HSYSLILKAVEHAQGFDSALDMFVGFGGYSRQKKDFDVIVYNTMISVCGRVNNWIETVKL 289

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
              M+   +  +  +Y++++       + ++AL  Y  M+     P +    ++I SC  
Sbjct: 290 WRSMKEDGLIGTRVTYSLLVCIFARCSQNELALDAYNEMIQNGLEPGDDVTQAVIGSCTR 349

Query: 581 GDLWDDV----ENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPD 739
              WD      EN+L   L PN+   NA I  +   G  +   +++  ++ +G  PD
Sbjct: 350 EGKWDLALNLFENMLNGRLKPNLISCNALINSLGKAGEVKLAFKVHGIIKILGHTPD 406


>ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Populus trichocarpa]
            gi|550320141|gb|EEF04021.2| hypothetical protein
            POPTR_0017s12620g [Populus trichocarpa]
          Length = 716

 Score =  334 bits (857), Expect = 2e-89
 Identities = 161/262 (61%), Positives = 205/262 (78%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            L+P  D +HA+IGA SK+  W LA N+FQ ML  GLKPNLIACNALIN LG+AG++K AF
Sbjct: 449  LKPREDTLHAVIGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEIKLAF 508

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            KV+K +K L HTPD YTWNALL   YRANQ+ +AL  F+ +++E +   N  LYN+ALM 
Sbjct: 509  KVFKILKSLGHTPDEYTWNALLSGLYRANQHVDALQLFERLKREQNSLLNEHLYNTALMS 568

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG WD+ALQ++W  E S +SVS ASYN+ IGACEVARKP++AL+VYEHM+H++C PD
Sbjct: 569  CQKLGLWDRALQLVWQAEASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQKCPPD 628

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FT+LSLIRSCIW  LWD+VE IL+ ++ P+VSLYNA I GMCL+G++ES K+LY++M  
Sbjct: 629  TFTYLSLIRSCIWASLWDEVEEILD-QVAPDVSLYNAVIHGMCLRGKTESAKKLYMKMGK 687

Query: 722  MGLIPDGKTRALMLQFMHQNST 787
             GL PDG   ALMLQ + +NST
Sbjct: 688  SGLKPDG---ALMLQNLRKNST 706



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 56/250 (22%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47   SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
            S+  K   A  + ++M   GL+PN  ACN+L++ L R    ++A +V++++K  E T   
Sbjct: 287  SRSNKIRSALQLLRSMEFSGLQPNRHACNSLLSCLIRHELHEDALRVFEYMKKNEIT-TG 345

Query: 227  YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQ--LYNSALMCCQRLGFWDKALQI 400
            + ++ +L A        +AL  F  ++     K +    +YN+ +  C +   W +  +I
Sbjct: 346  HAYSLILKAVASTKGCDSALDMFTELEAFSREKKDFDVIVYNTMISVCGKEKNWVETERI 405

Query: 401  LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
               M+ ++   +  +Y++++       + ++AL+ Y  M+     P   T  ++I +C  
Sbjct: 406  WRSMKENDYHGTQVTYSLLVSIFVRCGRNELALEAYSEMVQNGLKPREDTLHAVIGACSK 465

Query: 581  GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
               WD      +N+L+  L PN+   NA I  +   G  +   +++  ++ +G  PD  T
Sbjct: 466  KGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEIKLAFKVFKILKSLGHTPDEYT 525

Query: 749  RALMLQFMHQ 778
               +L  +++
Sbjct: 526  WNALLSGLYR 535


>gb|EMJ16149.1| hypothetical protein PRUPE_ppa003127mg [Prunus persica]
          Length = 601

 Score =  334 bits (857), Expect = 2e-89
 Identities = 160/254 (62%), Positives = 201/254 (79%)
 Frame = +2

Query: 5    EPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFK 184
            EPG D MHAIIGA SK+ KW LA N+FQ+ML  GLKPN +A NALINSLG+AG+++ AF+
Sbjct: 325  EPGNDTMHAIIGACSKDGKWDLALNIFQSMLDSGLKPNAVALNALINSLGKAGEVELAFR 384

Query: 185  VYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCC 364
            VY  +K L H+PD+YTWNALLGA YRAN++ +AL  +++I+     + N  LYN ALM C
Sbjct: 385  VYNIMKSLGHSPDAYTWNALLGALYRANRHDDALRLYESIKTSQGSQLNSHLYNMALMSC 444

Query: 365  QRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDN 544
             +LG WDKAL++LW +E S  SVS ASYN+V+ ACE ARKPK+ALQVYEHM+H++CTPD 
Sbjct: 445  SKLGLWDKALKLLWQLEASGQSVSTASYNLVVSACEKARKPKVALQVYEHMVHQKCTPDI 504

Query: 545  FTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDM 724
            FT+LSLIR CIWG LWD+VE IL     P++SLYNAAIQGMCL+G+ E  K++Y +MR+ 
Sbjct: 505  FTYLSLIRGCIWGSLWDEVEEIL-NWAAPDMSLYNAAIQGMCLRGKIELAKKIYTKMREN 563

Query: 725  GLIPDGKTRALMLQ 766
            GL PDGKTRA+MLQ
Sbjct: 564  GLQPDGKTRAMMLQ 577



 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  +F +M   GL PNL ACN+L++ L R   L +  +V++ +K  +     
Sbjct: 162 SRTNKTRSALELFTSMELSGLLPNLHACNSLLSCLLRNELLDDGLRVFEFMKR-KKLATG 220

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQ--LYNSALMCCQRLGFWDKALQI 400
           +T++ +L A   A   ++A+  F  +++E  V+ +    +YN+ +  C ++  W +  ++
Sbjct: 221 HTYSLILKAVSVAEGCSSAIEMFVAMEEESEVRDSFDTIVYNTMISICGKVNNWRETERL 280

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
              ++ + ++ +  +Y +++       + ++AL  Y  M+  +  P N T  ++I +C  
Sbjct: 281 WRHIKENGLTGTRVTYCLLVSIFVRCSQHELALDAYNEMIQNKFEPGNDTMHAIIGACSK 340

Query: 581 GDLWDDVENI----LEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
              WD   NI    L+  L PN    NA I  +   G  E   R+Y  M+ +G  PD  T
Sbjct: 341 DGKWDLALNIFQSMLDSGLKPNAVALNALINSLGKAGEVELAFRVYNIMKSLGHSPDAYT 400

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 401 WNALLGALYR 410


>gb|EXB77627.1| hypothetical protein L484_018143 [Morus notabilis]
          Length = 550

 Score =  328 bits (842), Expect = 1e-87
 Identities = 155/260 (59%), Positives = 203/260 (78%)
 Frame = +2

Query: 5    EPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFK 184
            EPG D M AIIGA +KE KW  A ++FQ+ML  GLKPN IACNA+INSLG+AG++K AF+
Sbjct: 270  EPGKDTMQAIIGACAKEGKWDFALSIFQSMLKKGLKPNAIACNAVINSLGKAGEIKLAFR 329

Query: 185  VYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCC 364
            V+  +K L H PD+YTWNALLGA YRAN + +AL  F+ I+++   + NL LYN AL+ C
Sbjct: 330  VFDVMKSLGHLPDTYTWNALLGALYRANLHDDALRLFERIKQDQDSELNLHLYNIALISC 389

Query: 365  QRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDN 544
             +LG W++A+Q+LW ME + +S+S ASYN+VI ACE ARKP +A+QVYEHM+H +C PD 
Sbjct: 390  SKLGLWERAVQLLWQMEANGMSISAASYNLVINACETARKPDVAVQVYEHMVHLKCIPDT 449

Query: 545  FTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDM 724
            FTHLSLIR CIWG LW++VE IL  +  P+ SLYNAAIQGMCL+G+ ++ K+LY +MR+ 
Sbjct: 450  FTHLSLIRVCIWGSLWNEVEEIL-NQAAPDASLYNAAIQGMCLRGKIDTAKKLYAKMRNC 508

Query: 725  GLIPDGKTRALMLQFMHQNS 784
            GL PDGKTRA+MLQ + ++S
Sbjct: 509  GLQPDGKTRAMMLQNLRKDS 528



 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 8/252 (3%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  + ++M   GL+P+L ACN+L++ L R   + +  +V++ +K  E     
Sbjct: 107 SRTNKVRSALELLRSMELSGLRPDLHACNSLLSCLLRNELVDDGLRVFEFMK-TEKITTG 165

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQ--LYNSALMCCQRLGFWDKALQI 400
           +T++ +L A   A     AL  F  +++E  VK      +YN+ +  C R+  W + L+ 
Sbjct: 166 HTYSLVLKAVTDAKGCDAALRMFSEMERECGVKNGFDAVVYNTMISVCGRVNNWLETLR- 224

Query: 401 LW--IMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSC 574
           LW  + EN  I   I +Y +++       +  +AL  Y  M+  +  P   T  ++I +C
Sbjct: 225 LWRSMKENCRIGTRI-TYCLLVSIFVRCGQNDLALDAYGEMVQSKFEPGKDTMQAIIGAC 283

Query: 575 IWGDLWDDV----ENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDG 742
                WD      +++L+K L PN    NA I  +   G  +   R++  M+ +G +PD 
Sbjct: 284 AKEGKWDFALSIFQSMLKKGLKPNAIACNAVINSLGKAGEIKLAFRVFDVMKSLGHLPDT 343

Query: 743 KTRALMLQFMHQ 778
            T   +L  +++
Sbjct: 344 YTWNALLGALYR 355


>ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            [Fragaria vesca subsp. vesca]
          Length = 588

 Score =  320 bits (821), Expect = 3e-85
 Identities = 152/254 (59%), Positives = 194/254 (76%)
 Frame = +2

Query: 5    EPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFK 184
            EPG D M A++GA SKE  W LA N+FQ ML  GLKPN IA NALINSLG+A +++ AF+
Sbjct: 310  EPGIDTMQAMVGACSKEGNWDLALNIFQDMLDSGLKPNAIAFNALINSLGKAAEVELAFR 369

Query: 185  VYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCC 364
            VY  +K + H+PD YTW ALL A YRAN++ +A+  F++I++    + N  LYN ALM C
Sbjct: 370  VYNIMKSMGHSPDPYTWKALLNALYRANRHDDAIKLFESIKRSQRSQLNSHLYNMALMSC 429

Query: 365  QRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDN 544
             +LG WDK+LQ+LW +E SE+SVS ASYN+VI ACE+ARKP++ALQVY HM+H++CTPD 
Sbjct: 430  SKLGLWDKSLQLLWQLEASELSVSTASYNLVISACEMARKPEVALQVYGHMVHQKCTPDT 489

Query: 545  FTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDM 724
            FTHLSLIRSC+WG  W++VE IL     P+ SLYNAAIQGM  +G++E  K+LY  MR+ 
Sbjct: 490  FTHLSLIRSCVWGSFWEEVEEIL-NHAAPDASLYNAAIQGMSFQGKTELAKKLYTNMREN 548

Query: 725  GLIPDGKTRALMLQ 766
            GL PDGKTRA+MLQ
Sbjct: 549  GLQPDGKTRAVMLQ 562



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K+  A  +F +M   GL  +L ACN+L++ L R G L    +V++ +K  + T   
Sbjct: 147 SRTNKFRSALELFTSMELSGLVSSLHACNSLLSCLLRNGFLDNGLRVFEFMKRKKLTT-G 205

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQ--LYNSALMCCQRLGFWDKALQI 400
           ++++ +L A   A+   +A+  F  ++KE  VK      +YN+ +  C ++  W +  + 
Sbjct: 206 HSYSLILKAVSDAHGCDSAIEMFREMEKESGVKDGFDTIVYNTMISVCGKVNNW-RETER 264

Query: 401 LW--IMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSC 574
           LW  I EN      + +Y +++       + ++AL  Y  M+  +  P   T  +++ +C
Sbjct: 265 LWRDIKENGHTGTRV-TYCLLVSIFVRCGEHELALDAYNEMIENKFEPGIDTMQAMVGAC 323

Query: 575 IWGDLWDDVENI----LEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDG 742
                WD   NI    L+  L PN   +NA I  +      E   R+Y  M+ MG  PD 
Sbjct: 324 SKEGNWDLALNIFQDMLDSGLKPNAIAFNALINSLGKAAEVELAFRVYNIMKSMGHSPDP 383

Query: 743 KTRALMLQFMHQ 778
            T   +L  +++
Sbjct: 384 YTWKALLNALYR 395


>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            [Cucumis sativus]
          Length = 600

 Score =  320 bits (819), Expect = 5e-85
 Identities = 151/254 (59%), Positives = 199/254 (78%)
 Frame = +2

Query: 5    EPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFK 184
            +PG D M AIIGA SKE KW  A  VFQ ML CGL+PN ++ NALIN+LG+A ++  AF 
Sbjct: 322  KPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFS 381

Query: 185  VYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCC 364
            VY  +K + H+PD YTWNALLGA Y+AN+Y++A+H F+ +++E  V+ N+ +YN+ LM C
Sbjct: 382  VYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKRE-KVQLNIHIYNTILMSC 440

Query: 365  QRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDN 544
             +LG W++A+QILW ME S +S+S +SYNIV+ ACE+ARKP+IALQVYE M+H++ TPD 
Sbjct: 441  SKLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDT 500

Query: 545  FTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDM 724
            FTHLSLIR CIWG LWD+VE +L K   P+VS+YN  IQGMCL+G+S+  K+LY +MR+ 
Sbjct: 501  FTHLSLIRCCIWGSLWDEVELLLNKS-APDVSVYNVVIQGMCLRGKSDLAKKLYTKMREN 559

Query: 725  GLIPDGKTRALMLQ 766
            G+ PDGKTRALMLQ
Sbjct: 560  GIQPDGKTRALMLQ 573


>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            [Cucumis sativus]
          Length = 600

 Score =  319 bits (817), Expect = 8e-85
 Identities = 151/254 (59%), Positives = 199/254 (78%)
 Frame = +2

Query: 5    EPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFK 184
            +PG D M AIIGA SKE KW  A  VFQ ML CGL+PN ++ NALIN+LG+A ++  AF 
Sbjct: 322  KPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFS 381

Query: 185  VYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCC 364
            VY  +K + H+PD YTWNALLGA Y+AN+Y++A+H F+ +++E  V+ N+ +YN+ LM C
Sbjct: 382  VYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKRE-KVQLNIHIYNTILMSC 440

Query: 365  QRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDN 544
             +LG W++A+QILW ME S +S+S +SYNIV+ ACE+ARKP+IALQVYE M+H++ TPD 
Sbjct: 441  SKLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDT 500

Query: 545  FTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDM 724
            FTHLSLIR CIWG LWD+VE +L K   P+VS+YN  IQGMCL+G+S+  K+LY +MR+ 
Sbjct: 501  FTHLSLIRCCIWGSLWDEVELLLNKS-APDVSVYNVVIQGMCLRGKSDLAKKLYTKMREN 559

Query: 725  GLIPDGKTRALMLQ 766
            G+ PDGKTRALMLQ
Sbjct: 560  GIQPDGKTRALMLQ 573


>ref|XP_006395288.1| hypothetical protein EUTSA_v10003982mg [Eutrema salsugineum]
            gi|557091927|gb|ESQ32574.1| hypothetical protein
            EUTSA_v10003982mg [Eutrema salsugineum]
          Length = 528

 Score =  310 bits (795), Expect = 3e-82
 Identities = 151/255 (59%), Positives = 193/255 (75%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            + P  DAM+A+I A +KEEKW LA  +FQ+ML  G+KPNL+ACN LINSLG+AGK+   F
Sbjct: 269  ISPREDAMYALINACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVF 328

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            KVY   K L H PD YTWNALL A Y+AN+Y + L  FD I+ E     N  LYN+A+M 
Sbjct: 329  KVYSVAKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMMS 388

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG W+KA+++L+ ME S ++VS +SYN+VI ACE +R+ KIAL+VYEHM  + C PD
Sbjct: 389  CQKLGSWEKAVKLLYEMEGSGLTVSTSSYNLVISACERSRQSKIALRVYEHMAQRDCKPD 448

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FT+LSL+RSCIWG LWD+V++IL K++ P+VSLYNAAI GMCL+   +  K LYV MR+
Sbjct: 449  TFTYLSLVRSCIWGSLWDEVKDIL-KKVEPDVSLYNAAIHGMCLRREFKIAKELYVEMRE 507

Query: 722  MGLIPDGKTRALMLQ 766
            MGL PDGKTRA+MLQ
Sbjct: 508  MGLEPDGKTRAMMLQ 522



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 60/250 (24%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  +F +M + GL+PN  ACN+L++ L R G L++ F V++ ++  E+    
Sbjct: 107 SRLNKVRSAMELFDSMRTLGLQPNAHACNSLLSCLLRNGNLQKVFIVFEFMRTKENV-TG 165

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQ--LYNSALMCCQRLGFWDKALQI 400
           +T++  L A        +AL  F  ++K+   K N    LYN+ +  C R+    +  +I
Sbjct: 166 HTYSLFLKAVAEVKGCDSALRMFRELEKDPKHKSNFDVILYNTVISLCGRINNVYETERI 225

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
             +M++     +  +Y++++       + ++AL  Y+ M++ + +P      +LI +C  
Sbjct: 226 WRVMKSDGQIGTEVTYSLLVSIFVRCGRSELALDAYDEMIYNKISPREDAMYALINACTK 285

Query: 581 GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
            + WD      +++L+K + PN+   N  I  +   G+     ++Y   + +G  PD  T
Sbjct: 286 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVAKSLGHKPDEYT 345

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 346 WNALLTALYK 355


>ref|NP_189575.2| pentatricopeptide repeat-containing protein EMB2076 [Arabidopsis
            thaliana] gi|75146586|sp|Q84J46.1|PP262_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g29290; AltName: Full=Protein EMBRYO DEFECTIVE 2076
            gi|28393331|gb|AAO42091.1| unknown protein [Arabidopsis
            thaliana] gi|28827658|gb|AAO50673.1| unknown protein
            [Arabidopsis thaliana] gi|332644042|gb|AEE77563.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 540

 Score =  310 bits (795), Expect = 3e-82
 Identities = 149/250 (59%), Positives = 193/250 (77%)
 Frame = +2

Query: 17   DAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKH 196
            DAM+A+I A +KEEKW LA  +FQ+ML  G+KPNL+ACN LINSLG+AGK+   FKVY  
Sbjct: 285  DAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 344

Query: 197  IKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCCQRLG 376
            +K L H PD YTWNALL A Y+AN+Y + L  FD I+ E     N  LYN+A++ CQ+LG
Sbjct: 345  LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLG 404

Query: 377  FWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHL 556
            +W+KA+++L+ ME S ++VS +SYN+VI ACE +RK K+AL VYEHM  + C P+ FT+L
Sbjct: 405  YWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYL 464

Query: 557  SLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIP 736
            SL+RSCIWG LWD+VE+IL K++ P+VSLYNAAI GMCL+   +  K LYV+MR+MGL P
Sbjct: 465  SLVRSCIWGSLWDEVEDIL-KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEP 523

Query: 737  DGKTRALMLQ 766
            DGKTRA+MLQ
Sbjct: 524  DGKTRAMMLQ 533



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 57/250 (22%), Positives = 126/250 (50%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+ +K   A  +F +M   GL+PN  ACN+ ++ L R G +++AF V++ ++  E+    
Sbjct: 118 SRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENV-TG 176

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKP--NLQLYNSALMCCQRLGFWDKALQI 400
           +T++ +L A        +AL  F  +++E   +   ++ LYN+A+  C R+    +  +I
Sbjct: 177 HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERI 236

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
             +M+      +  +Y++++       + ++AL VY+ M++ + +       ++I +C  
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTK 296

Query: 581 GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
            + WD      +++L+K + PN+   N  I  +   G+     ++Y  ++ +G  PD  T
Sbjct: 297 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 357 WNALLTALYK 366


>dbj|BAB03125.1| unnamed protein product [Arabidopsis thaliana]
          Length = 498

 Score =  310 bits (795), Expect = 3e-82
 Identities = 149/250 (59%), Positives = 193/250 (77%)
 Frame = +2

Query: 17  DAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKH 196
           DAM+A+I A +KEEKW LA  +FQ+ML  G+KPNL+ACN LINSLG+AGK+   FKVY  
Sbjct: 243 DAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 302

Query: 197 IKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCCQRLG 376
           +K L H PD YTWNALL A Y+AN+Y + L  FD I+ E     N  LYN+A++ CQ+LG
Sbjct: 303 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLG 362

Query: 377 FWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHL 556
           +W+KA+++L+ ME S ++VS +SYN+VI ACE +RK K+AL VYEHM  + C P+ FT+L
Sbjct: 363 YWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYL 422

Query: 557 SLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIP 736
           SL+RSCIWG LWD+VE+IL K++ P+VSLYNAAI GMCL+   +  K LYV+MR+MGL P
Sbjct: 423 SLVRSCIWGSLWDEVEDIL-KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEP 481

Query: 737 DGKTRALMLQ 766
           DGKTRA+MLQ
Sbjct: 482 DGKTRAMMLQ 491



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 57/250 (22%), Positives = 126/250 (50%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+ +K   A  +F +M   GL+PN  ACN+ ++ L R G +++AF V++ ++  E+    
Sbjct: 76  SRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENV-TG 134

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKP--NLQLYNSALMCCQRLGFWDKALQI 400
           +T++ +L A        +AL  F  +++E   +   ++ LYN+A+  C R+    +  +I
Sbjct: 135 HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERI 194

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
             +M+      +  +Y++++       + ++AL VY+ M++ + +       ++I +C  
Sbjct: 195 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTK 254

Query: 581 GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
            + WD      +++L+K + PN+   N  I  +   G+     ++Y  ++ +G  PD  T
Sbjct: 255 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 314

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 315 WNALLTALYK 324


>ref|XP_002875507.1| hypothetical protein ARALYDRAFT_484700 [Arabidopsis lyrata subsp.
           lyrata] gi|297321345|gb|EFH51766.1| hypothetical protein
           ARALYDRAFT_484700 [Arabidopsis lyrata subsp. lyrata]
          Length = 498

 Score =  307 bits (786), Expect = 3e-81
 Identities = 148/255 (58%), Positives = 193/255 (75%)
 Frame = +2

Query: 2   LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
           + P  DAM+A+I A +KEEKW LA  +FQ+ML  G+KPNL+ACN LINSLG+AGK+   F
Sbjct: 238 ISPREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVF 297

Query: 182 KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
           KVY   K L H PD YTWNALL A Y+AN+Y + L  FD I+ E     N  LYN+A++ 
Sbjct: 298 KVYSVAKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVS 357

Query: 362 CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
           CQ+LG+W+KA+++L+ ME S ++VS +SYN+VI ACE +RK K+AL VY HM  + C P+
Sbjct: 358 CQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYGHMAQRDCRPN 417

Query: 542 NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
            FT+LSL+RSCIWG LWD+V++IL K++ P+VSLYNAAI GMCL+   +  K LYV+MR+
Sbjct: 418 TFTYLSLVRSCIWGSLWDEVKDIL-KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMRE 476

Query: 722 MGLIPDGKTRALMLQ 766
           MGL PDGKTRA+MLQ
Sbjct: 477 MGLEPDGKTRAMMLQ 491



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 57/250 (22%), Positives = 125/250 (50%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+ +K   A  +F +M   GL+PN  ACN+ ++ L R G +++AF V++ ++  E+    
Sbjct: 76  SRLDKVRSALELFDSMRFLGLQPNAYACNSFLSCLLRNGDVQKAFTVFEFMRKKENV-TG 134

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKP--NLQLYNSALMCCQRLGFWDKALQI 400
           +T++ +L A        +AL  F  +++E   +   ++ LYN+A+  C R+    +  +I
Sbjct: 135 HTYSLMLKAIAEVKGCDSALRMFRELEREPKYRSYFDVVLYNTAISLCGRINNVYETERI 194

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
             +M+      +  +Y++++       + ++AL  Y+ M++ + +P      ++I +C  
Sbjct: 195 WRVMKGDGQIGTEITYSLLVSIFVRCGRSELALDAYDEMVNYKISPREDAMYAMISACTK 254

Query: 581 GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
            + WD      +++L+K + PN+   N  I  +   G+     ++Y   + +G  PD  T
Sbjct: 255 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVAKSLGHKPDEYT 314

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 315 WNALLTALYK 324


>ref|XP_006293002.1| hypothetical protein CARUB_v10019279mg [Capsella rubella]
            gi|482561709|gb|EOA25900.1| hypothetical protein
            CARUB_v10019279mg [Capsella rubella]
          Length = 560

 Score =  298 bits (762), Expect = 2e-78
 Identities = 144/255 (56%), Positives = 189/255 (74%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            + P  DAM A+I A +KEE W LA  +FQ+ML   +KPNL+ACN LINSLG+AGK+   F
Sbjct: 300  ISPREDAMCAMISACTKEENWDLALKIFQSMLKKRMKPNLVACNTLINSLGKAGKVGLVF 359

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            +VY   K L H  D YTWN+LL A Y+AN+Y + L  FD ++ E     N  LYN+A++ 
Sbjct: 360  RVYSVAKSLGHKADEYTWNSLLTALYKANRYEDVLQLFDMVRSENLCCLNEYLYNTAMVS 419

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            CQ+LG+W+KA+++L+ ME S ++VS +SYN+VI ACE +RK K+AL VYEHM    C P+
Sbjct: 420  CQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMTQMNCKPN 479

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FT+LSL+RSCIWG LWD+VE+ILEK + P+VSLYNAAI GMCL+   +  K LY++MR+
Sbjct: 480  TFTYLSLVRSCIWGSLWDEVEDILEK-VEPDVSLYNAAIHGMCLRREFKIAKELYLKMRE 538

Query: 722  MGLIPDGKTRALMLQ 766
            MGL PDGKTRA+MLQ
Sbjct: 539  MGLEPDGKTRAMMLQ 553



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 57/250 (22%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+ +K   A  +F +M   GL+P+  +CN+ ++ L R G +++AF V++ ++  E+    
Sbjct: 138 SRLDKVRSALELFDSMRFMGLQPSAHSCNSFLSCLLRNGDIQKAFTVFEFMRKKENVT-G 196

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKP--NLQLYNSALMCCQRLGFWDKALQI 400
           +T++ +L A        +AL  F  ++++   K   ++ LYN+A+  C R+    +A +I
Sbjct: 197 HTYSLMLKALAEVKGCDSALRMFRELERDPKHKSCFDVILYNTAISLCGRINNVYEAERI 256

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
             +M+      +  +Y++++       + ++AL  YE M++   +P      ++I +C  
Sbjct: 257 WRVMKGDGQIGTEITYSLLVSIFVRCGRSELALDAYEEMVNSNISPREDAMCAMISACTK 316

Query: 581 GDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
            + WD      +++L+K + PN+   N  I  +   G+     R+Y   + +G   D  T
Sbjct: 317 EENWDLALKIFQSMLKKRMKPNLVACNTLINSLGKAGKVGLVFRVYSVAKSLGHKADEYT 376

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 377 WNSLLTALYK 386


>ref|XP_006338389.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            isoform X1 [Solanum tuberosum]
            gi|565342514|ref|XP_006338390.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At3g29290-like isoform X2 [Solanum tuberosum]
            gi|565342516|ref|XP_006338391.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At3g29290-like isoform X3 [Solanum tuberosum]
          Length = 589

 Score =  291 bits (744), Expect = 2e-76
 Identities = 149/261 (57%), Positives = 186/261 (71%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            L P  D MHAIIGAYS+E K+  A N+ Q ML   LKPN  ACN +INSLG+AGK+K AF
Sbjct: 324  LSPESDTMHAIIGAYSREGKYDSALNILQCMLDSELKPNARACNIVINSLGKAGKVKLAF 383

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            ++Y  +K L H PD YTWN+LL A  RAN+Y +A+  F+ I+   SV  N  +YN+ L  
Sbjct: 384  EIYDLMKSLGHAPDVYTWNSLLNALNRANRYCDAIQLFERIRNIQSVILNEHIYNTVLTS 443

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            C RLG W+KA+Q+LW ME SE+ VS ASYN VIGACEVAR+PK+ALQVY  M+ +  +PD
Sbjct: 444  CHRLGLWEKAVQVLWQMEASELPVSTASYNQVIGACEVARRPKVALQVYYRMVRQNHSPD 503

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FT LSL+R CIWG L+++   IL K   PN SLYNAAIQGMCL GR +  K+LY  MR+
Sbjct: 504  IFTLLSLMRVCIWGSLYNEAVEIL-KFSEPNGSLYNAAIQGMCLTGRFDLAKKLYTEMRE 562

Query: 722  MGLIPDGKTRALMLQFMHQNS 784
              L PDGKTRA+MLQ + ++S
Sbjct: 563  RSLQPDGKTRAMMLQNLPKDS 583



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 65/251 (25%), Positives = 127/251 (50%), Gaps = 7/251 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  ++++M+  GLKP+L ACN+L++SL R G L  A KV+  +K  E T   
Sbjct: 162 SRLNKHKSALVIYKSMIFSGLKPDLHACNSLLSSLLRNGMLDNALKVFNSMKASELT-TG 220

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQL--YNSALMCCQRLGFWDKALQI 400
           ++++ +L A   A  Y  A++ F  +    +++  + +  YN+ +    +   WD+A +I
Sbjct: 221 HSYSLILKAVADARGYDTAINMFRELISSRNLREQIDIIVYNTMISIFAKANNWDQAQKI 280

Query: 401 LWIME-NSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCI 577
             I++ N ++  ++ +Y ++I       + ++A+  Y  M+H   +P++ T  ++I +  
Sbjct: 281 WKILQYNGQVGTTV-TYRLLICTFVRCGQNELAIDAYSEMIHNGLSPESDTMHAIIGAYS 339

Query: 578 WGDLWDDVENI----LEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGK 745
               +D   NI    L+ EL PN    N  I  +   G+ +    +Y  M+ +G  PD  
Sbjct: 340 REGKYDSALNILQCMLDSELKPNARACNIVINSLGKAGKVKLAFEIYDLMKSLGHAPDVY 399

Query: 746 TRALMLQFMHQ 778
           T   +L  +++
Sbjct: 400 TWNSLLNALNR 410



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 53/243 (21%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
 Frame = +2

Query: 26  HAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKY 205
           + +I  ++K   W  A  +++ +   G     +    LI +  R G+ + A   Y  + +
Sbjct: 262 NTMISIFAKANNWDQAQKIWKILQYNGQVGTTVTYRLLICTFVRCGQNELAIDAYSEMIH 321

Query: 206 LEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCCQRLGFWD 385
              +P+S T +A++GA+ R  +Y +AL+    +  +  +KPN +  N  +    + G   
Sbjct: 322 NGLSPESDTMHAIIGAYSREGKYDSALNILQCM-LDSELKPNARACNIVINSLGKAGKVK 380

Query: 386 KALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDN-FTHLSL 562
            A +I  +M++   +  + ++N ++ A   A +   A+Q++E + + Q    N   + ++
Sbjct: 381 LAFEIYDLMKSLGHAPDVYTWNSLLNALNRANRYCDAIQLFERIRNIQSVILNEHIYNTV 440

Query: 563 IRSCIWGDLWDDVENIL----EKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGL 730
           + SC    LW+    +L      EL  + + YN  I    +  R +   ++Y RM     
Sbjct: 441 LTSCHRLGLWEKAVQVLWQMEASELPVSTASYNQVIGACEVARRPKVALQVYYRMVRQNH 500

Query: 731 IPD 739
            PD
Sbjct: 501 SPD 503


>ref|XP_004232179.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            [Solanum lycopersicum]
          Length = 585

 Score =  290 bits (742), Expect = 4e-76
 Identities = 148/261 (56%), Positives = 186/261 (71%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            L P  D MHAIIGAYS+E K+  A N+ Q ML   LKPN  ACN +INSLG+AGK+K AF
Sbjct: 320  LSPESDTMHAIIGAYSREGKYDSALNILQCMLDSELKPNARACNIVINSLGKAGKVKLAF 379

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            ++Y  +K L H PD YTWN+LL A  RAN+Y +A+  F+ ++   SV  N  +YN+ L  
Sbjct: 380  EIYDLMKSLGHAPDVYTWNSLLNALNRANRYCDAIQLFERVRNIRSVILNEHIYNTVLTS 439

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            C RLG W+KA+Q+LW ME SE+ VS ASYN VIGACEVAR+PK+ALQVY  M+ +  +PD
Sbjct: 440  CHRLGLWEKAVQVLWHMEASELPVSTASYNQVIGACEVARRPKVALQVYYRMVRQNRSPD 499

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FT LSL+R CIWG L+++   IL K   PN SLYNAAIQGMCL GR +  K+LY  MR+
Sbjct: 500  IFTLLSLMRVCIWGSLYNEAVEIL-KFSEPNGSLYNAAIQGMCLTGRLDLAKKLYTEMRE 558

Query: 722  MGLIPDGKTRALMLQFMHQNS 784
              L PDGKTRA+MLQ + ++S
Sbjct: 559  RSLQPDGKTRAMMLQNLPKDS 579



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 64/250 (25%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           S+  K   A  ++++M+  GLKP+L ACN+L++SL R G L  A KV+  +K    T   
Sbjct: 158 SRLNKHKSALVIYKSMIFSGLKPDLHACNSLLSSLLRNGMLDNALKVFNSMKASGLT-TG 216

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQL--YNSALMCCQRLGFWDKALQI 400
           +T++ +L A   A  Y  A++ F  +    +++  + +  YN+ +    +   WD+A +I
Sbjct: 217 HTYSLILKAVADARGYDRAINMFRELISSRNLREQIDIIVYNTMISIFAKANNWDQAQKI 276

Query: 401 LWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSCIW 580
             I++      +  +Y ++I       + ++A+  Y  M+H   +P++ T  ++I +   
Sbjct: 277 WKILQYDGQVGTTVTYRLLICTFVRCGQYELAIDAYSEMIHNGLSPESDTMHAIIGAYSR 336

Query: 581 GDLWDDVENI----LEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDGKT 748
              +D   NI    L+ EL PN    N  I  +   G+ +    +Y  M+ +G  PD  T
Sbjct: 337 EGKYDSALNILQCMLDSELKPNARACNIVINSLGKAGKVKLAFEIYDLMKSLGHAPDVYT 396

Query: 749 RALMLQFMHQ 778
              +L  +++
Sbjct: 397 WNSLLNALNR 406



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 51/243 (20%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
 Frame = +2

Query: 26  HAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKY 205
           + +I  ++K   W  A  +++ +   G     +    LI +  R G+ + A   Y  + +
Sbjct: 258 NTMISIFAKANNWDQAQKIWKILQYDGQVGTTVTYRLLICTFVRCGQYELAIDAYSEMIH 317

Query: 206 LEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCCQRLGFWD 385
              +P+S T +A++GA+ R  +Y +AL+    +  +  +KPN +  N  +    + G   
Sbjct: 318 NGLSPESDTMHAIIGAYSREGKYDSALNILQCM-LDSELKPNARACNIVINSLGKAGKVK 376

Query: 386 KALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLH-KQCTPDNFTHLSL 562
            A +I  +M++   +  + ++N ++ A   A +   A+Q++E + + +    +   + ++
Sbjct: 377 LAFEIYDLMKSLGHAPDVYTWNSLLNALNRANRYCDAIQLFERVRNIRSVILNEHIYNTV 436

Query: 563 IRSCIWGDLWDDVENIL----EKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGL 730
           + SC    LW+    +L      EL  + + YN  I    +  R +   ++Y RM     
Sbjct: 437 LTSCHRLGLWEKAVQVLWHMEASELPVSTASYNQVIGACEVARRPKVALQVYYRMVRQNR 496

Query: 731 IPD 739
            PD
Sbjct: 497 SPD 499


>ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
            isoform 1 [Brachypodium distachyon]
            gi|357113449|ref|XP_003558515.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At3g29290-like isoform 2 [Brachypodium distachyon]
            gi|357113451|ref|XP_003558516.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At3g29290-like isoform 3 [Brachypodium distachyon]
          Length = 574

 Score =  276 bits (707), Expect = 5e-72
 Identities = 132/255 (51%), Positives = 183/255 (71%)
 Frame = +2

Query: 2    LEPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAF 181
            L P  D M AII + +KE +W  A   F+ MLS G+KPN+I  N++INSLG+AG+ + AF
Sbjct: 315  LNPSEDIMKAIIASCTKEGRWEFALATFRRMLSAGMKPNIIVFNSIINSLGKAGEDELAF 374

Query: 182  KVYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMC 361
            ++Y  +      PD YTW+ALL A YR+ +  +AL  F  I+ + S   N  LYN ALM 
Sbjct: 375  RMYHLLTSSGLEPDQYTWSALLSALYRSGRCWDALELFQGIKSKHSSVLNSHLYNIALMS 434

Query: 362  CQRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            C+RLG W+ ALQ+LW+ME +E+ +S+ SYN VI ACEVA +PK+AL+VY+ M H++C+PD
Sbjct: 435  CERLGQWEHALQLLWMMEKNELQISVVSYNHVIRACEVACEPKVALKVYQRMTHERCSPD 494

Query: 542  NFTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRD 721
             FTHLS+IR+CIWG LW+ VE+ILE E+ P+ S+YN  IQG+CL+G+    +++Y +MR 
Sbjct: 495  TFTHLSVIRACIWGSLWNKVEDILE-EVEPDSSIYNTVIQGLCLRGKIRLARKVYTKMRS 553

Query: 722  MGLIPDGKTRALMLQ 766
            +GL PDGKTR+ MLQ
Sbjct: 554  IGLKPDGKTRSFMLQ 568



 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 67/253 (26%), Positives = 124/253 (49%), Gaps = 8/253 (3%)
 Frame = +2

Query: 47  SKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFKVYKHIKYLEHTPDS 226
           SK  K   A  +F +M + GL+PN  ACN+L+ S  R G   +A K+++ +K  +     
Sbjct: 153 SKSNKVRSATELFDSMRASGLQPNAHACNSLLASFVRRGYSTDAMKMFEFMKG-KGLATG 211

Query: 227 YTWNALLGAFYRANQYANALHFFDTIQ--KEWSVKPNLQLYNSALMCCQRLGFWDKALQI 400
           +T+  +L A      Y +AL  F  I+  KE     ++ +YN+ +  C R   W + ++ 
Sbjct: 212 HTYTLILKAVASTEGYVSALQIFSEIEEGKESRGTLDVIVYNTMISACGRAKDW-RQVEK 270

Query: 401 LW--IMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDNFTHLSLIRSC 574
           LW  ++ENS IS ++ +Y++++       + ++A+  Y+ ML     P      ++I SC
Sbjct: 271 LWRRLVENS-ISGTLMTYDLLVSTFVQCGQSELAIAAYQEMLLNGLNPSEDIMKAIIASC 329

Query: 575 IWGDLWD----DVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDMGLIPDG 742
                W+        +L   + PN+ ++N+ I  +   G  E   R+Y  +   GL PD 
Sbjct: 330 TKEGRWEFALATFRRMLSAGMKPNIIVFNSIINSLGKAGEDELAFRMYHLLTSSGLEPDQ 389

Query: 743 KTRALMLQFMHQN 781
            T + +L  ++++
Sbjct: 390 YTWSALLSALYRS 402


>ref|XP_006837037.1| hypothetical protein AMTR_s00110p00040270 [Amborella trichopoda]
            gi|548839630|gb|ERM99890.1| hypothetical protein
            AMTR_s00110p00040270 [Amborella trichopoda]
          Length = 622

 Score =  276 bits (705), Expect = 8e-72
 Identities = 139/260 (53%), Positives = 182/260 (70%)
 Frame = +2

Query: 5    EPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFK 184
            +P  D + A++ A ++E +W LA ++F+ ML  GL PN IA N LIN LG+ G++K A K
Sbjct: 335  KPREDVLKAMVSACAQEGQWALALSIFRQMLKDGLHPNAIAYNTLINCLGKVGEVKLAIK 394

Query: 185  VYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCC 364
            +Y H+K  E+ PD+YTWNALL A Y A QY +AL  F+ I    S + N+ +YN ALM C
Sbjct: 395  IYNHMKASENKPDTYTWNALLSALYIAGQYDDALLLFERID---SSQLNIHIYNLALMSC 451

Query: 365  QRLGFWDKALQILWIMENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPDN 544
            +RLG W ++LQ+LW ME +E   S  SYN VIGACEVARKPK+ALQVYEHML  +CTPD 
Sbjct: 452  KRLGLWKQSLQLLWKMEANETMPSTLSYNHVIGACEVARKPKVALQVYEHMLMTKCTPDT 511

Query: 545  FTHLSLIRSCIWGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYVRMRDM 724
            FT++ LIR+C+ G LWD+V  IL + + PN SLYNA I  +C +G+  S K +Y RMR  
Sbjct: 512  FTYVLLIRACVVGALWDEVMEILNR-IQPNASLYNALIYDLCSQGKITSAKMMYSRMRAY 570

Query: 725  GLIPDGKTRALMLQFMHQNS 784
            GL PDG+TRALMLQ +  +S
Sbjct: 571  GLNPDGRTRALMLQHLPSDS 590



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 56/262 (21%), Positives = 118/262 (45%), Gaps = 5/262 (1%)
 Frame = +2

Query: 5   EPGYDAMHAIIGAYSKEEKWYLAFNVFQTMLSCGLKPNLIACNALINSLGRAGKLKEAFK 184
           E   +++   I   S+  K   A  ++ +M    L+PNL +CN+LI+ L R  +L +A K
Sbjct: 163 ETNEESLSKRILVLSRSNKINSALELYMSMEMSSLQPNLHSCNSLISCLLRNNRLDDALK 222

Query: 185 VYKHIKYLEHTPDSYTWNALLGAFYRANQYANALHFFDTIQKEWSVKPNLQLYNSALMCC 364
           ++  +K  +     +T++ +  A      +  AL  F+ ++       ++ +YN+ +  C
Sbjct: 223 MFDTMK-KKRVVSGHTYSLIFKAISFCQGWERALKMFNELKTN---DFDIVVYNTLISIC 278

Query: 365 QRLGFWDKALQILWI-MENSEISVSIASYNIVIGACEVARKPKIALQVYEHMLHKQCTPD 541
            +   WD+ +Q+LW  ++      ++ +Y++++       +P++A+  Y  M+   C P 
Sbjct: 279 GKENQWDQ-VQLLWRGLKQDGHKGTMVTYSLLVSIFVRNGRPELAIDAYHEMIENGCKPR 337

Query: 542 NFTHLSLIRSCI----WGDLWDDVENILEKELTPNVSLYNAAIQGMCLKGRSESGKRLYV 709
                +++ +C     W         +L+  L PN   YN  I  +   G  +   ++Y 
Sbjct: 338 EDVLKAMVSACAQEGQWALALSIFRQMLKDGLHPNAIAYNTLINCLGKVGEVKLAIKIYN 397

Query: 710 RMRDMGLIPDGKTRALMLQFMH 775
            M+     PD  T   +L  ++
Sbjct: 398 HMKASENKPDTYTWNALLSALY 419