BLASTX nr result

ID: Achyranthes22_contig00053831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00053831
         (457 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305791.2| hypothetical protein POPTR_0004s04450g [Popu...    47   2e-07
emb|CAC16734.1| arabinogalactan protein [Daucus carota]                49   4e-06

>ref|XP_002305791.2| hypothetical protein POPTR_0004s04450g [Populus trichocarpa]
           gi|118481929|gb|ABK92898.1| unknown [Populus
           trichocarpa] gi|550340312|gb|EEE86302.2| hypothetical
           protein POPTR_0004s04450g [Populus trichocarpa]
          Length = 234

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
 Frame = +2

Query: 257 LGIGVQIIHQITMIPLS-STSTDKNGYFLLPAP----KFGLERCRVIVYFVAKDSPCHKI 421
           LG  V++    TM P    T+TDKNGYFL+ AP     +G+ +C+V +   A  + C KI
Sbjct: 133 LGATVKLQCNNTMKPQDVKTTTDKNGYFLIKAPGTITNYGVHKCKVWL-VSAPSTACSKI 191

Query: 422 TNLNYGEDGAIV 457
           TNL+ G  GA++
Sbjct: 192 TNLHGGLTGAML 203



 Score = 33.9 bits (76), Expect(2) = 2e-07
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +1

Query: 136 VNPPLPFHVIMQRKKPVVEGFVYCKSCN 219
           + PP+P H    RK   V+G VYCKSCN
Sbjct: 94  IPPPVPTH--FPRKLVAVQGVVYCKSCN 119


>emb|CAC16734.1| arabinogalactan protein [Daucus carota]
          Length = 242

 Score = 48.5 bits (114), Expect(2) = 4e-06
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
 Frame = +2

Query: 257 LGIGVQIIHQITMIPLS-STSTDKNGYFLLPAPK----FGLERCRVIVYFVAKDSPCHKI 421
           LG  V++    T  PL     TDKNGYF L APK    +G+ +CRV V   + +  C K 
Sbjct: 136 LGAVVKLQCNNTKYPLVVQGKTDKNGYFSLNAPKTITTYGVHKCRVFV-VSSPEKKCDKP 194

Query: 422 TNLNYGEDGAIV 457
           TNL YG  GAI+
Sbjct: 195 TNLRYGVKGAIL 206



 Score = 27.7 bits (60), Expect(2) = 4e-06
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = +1

Query: 136 VNPPL--PFHV---IMQRKKPVVEGFVYCKSCN 219
           V PP+  P H    +  RK   V+G VYCK CN
Sbjct: 90  VKPPVKAPSHAPTPLPARKLVAVQGVVYCKPCN 122


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