BLASTX nr result
ID: Achyranthes22_contig00053831
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Achyranthes22_contig00053831 (457 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305791.2| hypothetical protein POPTR_0004s04450g [Popu... 47 2e-07 emb|CAC16734.1| arabinogalactan protein [Daucus carota] 49 4e-06 >ref|XP_002305791.2| hypothetical protein POPTR_0004s04450g [Populus trichocarpa] gi|118481929|gb|ABK92898.1| unknown [Populus trichocarpa] gi|550340312|gb|EEE86302.2| hypothetical protein POPTR_0004s04450g [Populus trichocarpa] Length = 234 Score = 47.0 bits (110), Expect(2) = 2e-07 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 5/72 (6%) Frame = +2 Query: 257 LGIGVQIIHQITMIPLS-STSTDKNGYFLLPAP----KFGLERCRVIVYFVAKDSPCHKI 421 LG V++ TM P T+TDKNGYFL+ AP +G+ +C+V + A + C KI Sbjct: 133 LGATVKLQCNNTMKPQDVKTTTDKNGYFLIKAPGTITNYGVHKCKVWL-VSAPSTACSKI 191 Query: 422 TNLNYGEDGAIV 457 TNL+ G GA++ Sbjct: 192 TNLHGGLTGAML 203 Score = 33.9 bits (76), Expect(2) = 2e-07 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +1 Query: 136 VNPPLPFHVIMQRKKPVVEGFVYCKSCN 219 + PP+P H RK V+G VYCKSCN Sbjct: 94 IPPPVPTH--FPRKLVAVQGVVYCKSCN 119 >emb|CAC16734.1| arabinogalactan protein [Daucus carota] Length = 242 Score = 48.5 bits (114), Expect(2) = 4e-06 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 5/72 (6%) Frame = +2 Query: 257 LGIGVQIIHQITMIPLS-STSTDKNGYFLLPAPK----FGLERCRVIVYFVAKDSPCHKI 421 LG V++ T PL TDKNGYF L APK +G+ +CRV V + + C K Sbjct: 136 LGAVVKLQCNNTKYPLVVQGKTDKNGYFSLNAPKTITTYGVHKCRVFV-VSSPEKKCDKP 194 Query: 422 TNLNYGEDGAIV 457 TNL YG GAI+ Sbjct: 195 TNLRYGVKGAIL 206 Score = 27.7 bits (60), Expect(2) = 4e-06 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%) Frame = +1 Query: 136 VNPPL--PFHV---IMQRKKPVVEGFVYCKSCN 219 V PP+ P H + RK V+G VYCK CN Sbjct: 90 VKPPVKAPSHAPTPLPARKLVAVQGVVYCKPCN 122