BLASTX nr result

ID: Achyranthes22_contig00053792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00053792
         (294 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                    88   1e-15
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                 85   1e-14
emb|CAA73042.1| polyprotein [Ananas comosus]                           61   1e-07
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...    57   3e-06
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ...    56   6e-06
emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]                 55   8e-06

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/95 (41%), Positives = 61/95 (64%)
 Frame = -3

Query: 292  TKHSLNAIMIVPKEICEELKKMGIEVVQHGESQVRLNALSVDPELYSELRLKQQGDTKLE 113
            + HSLN +++  K +CEE  ++ IEVV  GE +  L+AL+++P    E+R  Q GD KLE
Sbjct: 1004 SSHSLNTLVVADK-LCEEFSRLQIEVVHEGEVERLLSALTIEPNFLEEIRASQPGDVKLE 1062

Query: 112  AIRKAMDNRRAGDFHIEADGSLKFRGRWCVPEDVE 8
             ++  +   +A  F I  DGS++++GRWCVP+  E
Sbjct: 1063 RVKAKLKEGKAEGFAIHEDGSIRYKGRWCVPQKCE 1097


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/92 (41%), Positives = 63/92 (68%)
 Frame = -3

Query: 292  TKHSLNAIMIVPKEICEELKKMGIEVVQHGESQVRLNALSVDPELYSELRLKQQGDTKLE 113
            + HSL+ + IVP+E+C ++K++ +E++  GES+ RL+ LS+   ++ E+   Q GD  L+
Sbjct: 972  SSHSLSTL-IVPEELCRDMKRLNLEILNPGESEARLSNLSLGVSIFDEIIEGQVGDEHLD 1030

Query: 112  AIRKAMDNRRAGDFHIEADGSLKFRGRWCVPE 17
             I++ M   +  DF I  DGSL+F+GRWCVP+
Sbjct: 1031 KIKEKMKQGKEIDFKIHEDGSLRFKGRWCVPQ 1062


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/89 (33%), Positives = 53/89 (59%)
 Frame = -3

Query: 268 MIVPKEICEELKKMGIEVVQHGESQVRLNALSVDPELYSELRLKQQGDTKLEAIRKAMDN 89
           ++    + E++K++ +E+V   ++ +RL  L V P L   ++ KQ  D +L+ I+  M +
Sbjct: 437 VVTQPRLIEQMKRLELEIVTP-DTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVD 495

Query: 88  RRAGDFHIEADGSLKFRGRWCVPEDVELK 2
              GDF ++ DG ++FRGR CVP D  +K
Sbjct: 496 GCTGDFTLDGDGLMRFRGRICVPADSGIK 524


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/84 (39%), Positives = 47/84 (55%)
 Frame = -3

Query: 253 EICEELKKMGIEVVQHGESQVRLNALSVDPELYSELRLKQQGDTKLEAIRKAMDNRRAGD 74
           E+ EELK + +E+V  G     +NAL V P L S++R KQ  D  ++ I+K M   +A  
Sbjct: 549 ELYEELKHLNLEIVNQG----CVNALEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPG 604

Query: 73  FHIEADGSLKFRGRWCVPEDVELK 2
           F  +  G++ F  R CVP   ELK
Sbjct: 605 FSEDEQGTVWFGNRICVPNQQELK 628


>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 482

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/93 (29%), Positives = 50/93 (53%)
 Frame = -3

Query: 280 LNAIMIVPKEICEELKKMGIEVVQHGESQVRLNALSVDPELYSELRLKQQGDTKLEAIRK 101
           ++A+M+   E+ E+ + + + V +     V+L  L +D E    ++  Q+ D K   +  
Sbjct: 184 MSALMVREFELLEQFRDLSL-VCEWSPQSVKLGMLKIDSEFLKSIKEAQKVDVKFVDLLV 242

Query: 100 AMDNRRAGDFHIEADGSLKFRGRWCVPEDVELK 2
           A +     DF ++  G L+FRGR C+P+D E+K
Sbjct: 243 ASNQTEDSDFKVDDHGVLRFRGRICIPDDAEMK 275


>emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]
          Length = 1421

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
 Frame = -3

Query: 256  KEICEELKK----MGIEVVQHGESQVRLNALSVDPELYSELRLKQQGDTKLEAIRKAMDN 89
            + +CEEL++    + + +V+HG     + AL   P L  ++R  Q  D+++  ++K M  
Sbjct: 982  ESMCEELRQEFEHLNVGIVEHGF----VAALEAQPTLVDQVRAAQVNDSEIAELKKNMRV 1037

Query: 88   RRAGDFHIEADGSLKFRGRWCVPEDVELK 2
            R+A DFH +  G++    R CVP+D ELK
Sbjct: 1038 RKARDFHEDEHGTIWLGERLCVPDDKELK 1066


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