BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00052623
         (1177 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers...   491   e-136
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]   454   e-125
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha...   446   e-122
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]   444   e-122
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]   442   e-121
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]   433   e-119
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]   432   e-118
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]              422   e-115
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]                419   e-115
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]      419   e-115
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]   398   e-108
ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292...   396   e-108
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304...   390   e-106
gb|AFP55573.1| retrotransposon protein [Rosa rugosa]                  378   e-102
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]   374   e-101
gb|AAL68851.1|AF466199_10 putative copia polyprotein [Sorghum bi...   371   e-100
gb|ABF96131.1| retrotransposon protein, putative, Ty1-copia subc...   356   1e-95
emb|CAN77860.1| hypothetical protein VITISV_005456 [Vitis vinifera]   352   1e-94
ref|XP_004237326.1| PREDICTED: uncharacterized protein LOC101252...   351   4e-94
gb|ABF67931.1| Elote1 putative polyprotein [Zea mays]                 348   2e-93

>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
          Length = 779

 Score =  491 bits (1263), Expect = e-136
 Identities = 238/399 (59%), Positives = 299/399 (74%), Gaps = 8/399 (2%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            ILHA TL+R+RPT+YH+FSPLQL  G+EPNISHL+ FGCAVYVPIAPPQRTKMGPQRRLG
Sbjct: 92   ILHAATLVRIRPTNYHEFSPLQLTFGQEPNISHLRVFGCAVYVPIAPPQRTKMGPQRRLG 151

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            IYVG+E PSIIKYLEPMTGDLF  RF DCHF+E+ +PTLGG+    ++   EI WN++ L
Sbjct: 152  IYVGYESPSIIKYLEPMTGDLFKVRFADCHFDESVYPTLGGE---HKSLGKEIDWNSSSL 208

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
            + LDPRTN CEQEV++I++LQ+IANQLPDAFT++ ++TKS+IPA NAP R++IPT   V 
Sbjct: 209  SHLDPRTNQCEQEVQRIIYLQNIANQLPDAFTNLPRITKSYIPAVNAPVRVDIPTGQIVK 268

Query: 635  ERESIARRKRGRPLGSKDLKPRKLKR---QDG-----ITKDASDVLPTNNILXXXXXXXX 480
              ES    KRGRP+GSKD  PRK K    QD      I++D + V+              
Sbjct: 269  ANESRPHLKRGRPIGSKDKNPRKRKGINDQDDHGLKEISQDETQVIT------------- 315

Query: 479  XXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDENDM 300
                      DE   +   N+EIS+NY ST+K WNR +++ID +F+Y++AIE++  + D 
Sbjct: 316  ---------HDEEEVRTSQNNEISMNYVSTRKFWNRNNVVIDNIFAYNVAIEIMQQDEDS 366

Query: 299  EPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNEK 120
            EP+++ ECR+R+DWPKWK+ IQAEL SLEKRE FG +  TP  +KP+GY+W+FVRKRNEK
Sbjct: 367  EPKSVHECRQRNDWPKWKDAIQAELASLEKRESFGPIIRTPEGIKPVGYKWIFVRKRNEK 426

Query: 119  NEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
             E++RYKARLVAQGFSQ PGIDY ETYSPVVDA T R+L
Sbjct: 427  GEVMRYKARLVAQGFSQRPGIDYMETYSPVVDAITFRYL 465


>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
          Length = 1306

 Score =  454 bits (1167), Expect = e-125
 Identities = 220/391 (56%), Positives = 281/391 (71%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            I+H   L+R+RPT+YH++SP QLV GK+PNI HL+ FGCAVYVPIAP Q TKMGPQRRLG
Sbjct: 563  IMHXAALVRIRPTTYHEYSPSQLVLGKQPNIXHLRIFGCAVYVPIAPTQXTKMGPQRRLG 622

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            +YVGF+ PSII YLEP+ GD+FTARF DCHFNE+ FP+LG +K+    +  EI+W  + +
Sbjct: 623  VYVGFDSPSIIXYLEPLXGDVFTARFADCHFNESVFPSLGREKSIPEERR-EISWKTSTM 681

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
              LDPRTN CE EV++I+HLQ++ NQLPDAF D KKVTKSHIPA N PARI++P     N
Sbjct: 682  THLDPRTNQCELEVQRIIHLQNLXNQLPDAFIDTKKVTKSHIPAANTPARIDVPVGQLTN 741

Query: 635  ERESIARRKRGRPLGSKDLKPRKLKRQDGITKDASDVLPTNNILXXXXXXXXXXXXXXXX 456
              ES  R KRGRP+GSKD+   +   ++   +  +   P                     
Sbjct: 742  --ESKIRLKRGRPVGSKDVHIEQEAPEEAHIEQETPEDP------------------HIE 781

Query: 455  NKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDENDMEPRTIDEC 276
             +     +   N EIS++Y  T ++W+R +I+I+ +F++ +A ++I ++ D EPR ++EC
Sbjct: 782  REAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEEC 841

Query: 275  RKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNEKNEIVRYKA 96
            R R+DWPKWKE IQAEL SL KREVFG + +TP DVKP+GY+WVFVRKRNE NEI+RYKA
Sbjct: 842  RHRNDWPKWKEXIQAELNSLTKREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKA 901

Query: 95   RLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            RLVAQGFSQ PGIDYEETYSPV+DA T RFL
Sbjct: 902  RLVAQGFSQRPGIDYEETYSPVMDAITFRFL 932


>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
          Length = 1123

 Score =  446 bits (1146), Expect = e-122
 Identities = 228/400 (57%), Positives = 284/400 (71%), Gaps = 9/400 (2%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            +LHA  LIR+RP+S HK+SP QL+ G EP+ISHL+TFGCAVYVPIAPPQRTKMGPQRR+G
Sbjct: 325  VLHASELIRIRPSSEHKYSPSQLLIGHEPDISHLRTFGCAVYVPIAPPQRTKMGPQRRMG 384

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEI-EITWNATQ 819
            IYVGF+ P+IIKYLEP TGDLF AR+ DCHF+E+ FP LGG+  ++  KEI EI WN T 
Sbjct: 385  IYVGFDSPTIIKYLEPTTGDLFKARYADCHFSESEFPALGGE-TNKLGKEIKEIAWNQTS 443

Query: 818  LAMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKV 639
            L   DPRT  C+ EV KI+HLQ +AN+LPD+F D K+V KS+IPA NAP RI+I     V
Sbjct: 444  LNWQDPRTLMCDSEVHKIIHLQKLANELPDSFADSKRVVKSYIPACNAPVRIDIQKGINV 503

Query: 638  NERESIARRKRGRPLGSKDLKPRKLKRQDGITK--------DASDVLPTNNILXXXXXXX 483
               ES  ++K GRP+GSKD  PRK K+    T+         AS   P N I        
Sbjct: 504  IATESNPQKKHGRPVGSKDKNPRKTKKGVMGTEVKETIDMAAASPKEPPNEI-------- 555

Query: 482  XXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDEND 303
                     + + H  +GI N EIS+NY  +  +WNRK++ +DE F+Y +A E+  D   
Sbjct: 556  --------RDAEAHGPEGIDNDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEISEDH-- 605

Query: 302  MEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNE 123
             EP +I EC +R DW KWKE I  EL SL++R+VFG +  TP+++KP+G++WVFVRKRNE
Sbjct: 606  -EPTSIIECTQRSDWLKWKEAIDVELGSLKRRDVFGPILRTPSNIKPVGHKWVFVRKRNE 664

Query: 122  KNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            KNEIVR+KARLVAQGFSQ PG+DYEETYSPVVDATT R+L
Sbjct: 665  KNEIVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYL 704


>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
          Length = 1141

 Score =  444 bits (1142), Expect = e-122
 Identities = 228/400 (57%), Positives = 285/400 (71%), Gaps = 9/400 (2%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            +LHA  LIR+RP+S HK+SP QL++G EP+ISHL+TFGCAVYVPIAPPQRTKMGPQRR+G
Sbjct: 325  VLHASELIRIRPSSEHKYSPSQLLTGHEPDISHLRTFGCAVYVPIAPPQRTKMGPQRRMG 384

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEI-EITWNATQ 819
            IYVGF+ P+IIKYLEP TGDLF AR+ DCHF+E+ FP LGG+  ++  KEI EI WN T 
Sbjct: 385  IYVGFDSPTIIKYLEPTTGDLFKARYADCHFSESEFPALGGE-TNKLGKEIKEIAWNQTS 443

Query: 818  LAMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKV 639
            L   DP+T  C+ EV KI+HLQ +AN+LPD+F D K+V KS+IPA NA  RI+I     V
Sbjct: 444  LNWQDPQTLMCDSEVHKIIHLQKLANELPDSFADPKRVVKSYIPACNAQVRIDIQKGINV 503

Query: 638  NERESIARRKRGRPLGSKDLKPRKLKRQDGITK--------DASDVLPTNNILXXXXXXX 483
               ES  ++KRGRP+GSKD  PRK K+    T+         AS   P N I        
Sbjct: 504  IATESNPQKKRGRPVGSKDKIPRKTKKGAMGTEVKETIDMAAASPKEPPNEI-------- 555

Query: 482  XXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDEND 303
                     + + H  +GI N EIS+NY  +  +WNRK++ +DE F+Y +A E+     D
Sbjct: 556  --------RDAEAHGPEGIDNDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEI---NED 604

Query: 302  MEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNE 123
             EP +I EC +R DW KWKE I  EL SL+KR+VFG +  TP+++KP+G++WVFVRKRNE
Sbjct: 605  HEPTSIIECTQRSDWLKWKEAIDVELGSLKKRDVFGPILRTPSNIKPVGHKWVFVRKRNE 664

Query: 122  KNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            KNEIVR+KARLVAQGFSQ PG+DYEETYSPVVDATT R+L
Sbjct: 665  KNEIVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYL 704


>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
          Length = 1496

 Score =  442 bits (1136), Expect = e-121
 Identities = 218/391 (55%), Positives = 277/391 (70%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            I+HA  L+R+RPT+YH++SP QLV GK+PNISHL+ FGCAVYVPIAP QRTKMGPQRRLG
Sbjct: 662  IMHAAALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLG 721

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            +YVGF+ PSII+YLEP+T D+FTARF DCHFNE+ FP+LG +K+    +  EI+W  + +
Sbjct: 722  VYVGFDSPSIIRYLEPLTDDVFTARFADCHFNESVFPSLGREKSIPEERR-EISWKTSTM 780

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
              LDPRTN CE EV++I+HLQ++ANQLPDAF D KKVTKSHIP  N PARI++P     N
Sbjct: 781  THLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKVTKSHIPXANTPARIDVPVGQLTN 840

Query: 635  ERESIARRKRGRPLGSKDLKPRKLKRQDGITKDASDVLPTNNILXXXXXXXXXXXXXXXX 456
              ES  R KRGRP+GSKD+ PRK + Q+ +      +  T+                   
Sbjct: 841  --ESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEEAIKMTDQFKIDKSIALEEAQIMQKA 898

Query: 455  NKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDENDMEPRTIDEC 276
             K+ H ++  +  E  +   + +     +    +     ++A ++I ++ D EPR ++EC
Sbjct: 899  PKEVHIEQE-APEEXHIEQETPEDPHIERXAPEEAQVPENLASDIIRNDEDPEPRNVEEC 957

Query: 275  RKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNEKNEIVRYKA 96
            R R+DWPKWKE IQAEL SL KREVFG + +TP DVKP+GY+WVFVRKRNE NEI+RYKA
Sbjct: 958  RHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKA 1017

Query: 95   RLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            RLVAQG SQ PGIDYEETYSPV+DA T RFL
Sbjct: 1018 RLVAQGXSQRPGIDYEETYSPVMDAITFRFL 1048


>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
          Length = 1146

 Score =  433 bits (1113), Expect = e-119
 Identities = 222/408 (54%), Positives = 279/408 (68%), Gaps = 17/408 (4%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            I+HA  L+R+RPT+YH++SP QLV GK+PNISHL+ FGCAVYVPIAP QRTKMGP RRLG
Sbjct: 329  IMHAAALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPXRRLG 388

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
             YVGF+ PSII+YLEP+TGD+FTARF DCHFNE+ FP+LG +K+    +  EI+W  + +
Sbjct: 389  XYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVFPSLGXEKSIPEERR-EISWKTSTM 447

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
              LDPRTN CE EV++I+HLQ++ANQLPDAF D KKVTKSHIPA N PARI++P     N
Sbjct: 448  THLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKVTKSHIPAANTPARIDVPVGQLTN 507

Query: 635  ERESIARRKRGRPLGSKD---LKPRKLKRQDGITKDASDVLPTNNIL--XXXXXXXXXXX 471
              ES  R KRGRP  +++        +K  D    D S  L    I+             
Sbjct: 508  --ESKIRLKRGRPRRTQEKLGTLEEAIKMTDQFKIDKSIALEEAQIMQKAPEEAHIEQEA 565

Query: 470  XXXXXNKDEHNDKGISNSE----ISLN--------YASTKKQWNRKDIIIDEVFSYSIAI 327
                    +   + I N +      LN        Y  T ++W+R +I+I+ +F++ +A 
Sbjct: 566  LKRYILNKKPPKRHILNKKPLKIXILNEKPLKRHXYVQTGEKWDRNNIVINNIFAFQVAS 625

Query: 326  EMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRW 147
            ++I ++ D EPR  +ECR R+D PKWKE IQAEL SL KREVFG + +TP DVKP+GY+W
Sbjct: 626  DIIRNDEDPEPRNXEECRHRNDXPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKW 685

Query: 146  VFVRKRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            VFVRKRNE NEI+RYKARLVAQGFS  PGIDYE TYSPV+DA T RFL
Sbjct: 686  VFVRKRNENNEIIRYKARLVAQGFSXRPGIDYEXTYSPVMDAITFRFL 733


>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
          Length = 1501

 Score =  432 bits (1110), Expect = e-118
 Identities = 215/397 (54%), Positives = 274/397 (69%), Gaps = 27/397 (6%)
 Frame = -3

Query: 1172 LHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLGI 993
            +HA  L+R+RPT+YH++SP QLV GK+PNISHL+ FGCAVYVPIAP QRTKMGPQRRLG+
Sbjct: 661  MHAAALVRVRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLGV 720

Query: 992  YVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQLA 813
            YVGF+ PSII+YLEP+TGD+FTARF DCHFNE+ FP+LG +K+    +  EI+W  + + 
Sbjct: 721  YVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVFPSLGREKSIPEERR-EISWKTSAMT 779

Query: 812  MLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVNE 633
             LDPRTN CE EV++I+HLQ++ANQLPDAF D KKVTKSHIPA N PARI++P     N 
Sbjct: 780  HLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKVTKSHIPAANTPARIDVPVGQLTN- 838

Query: 632  RESIARRKRGRPLGSKDLKPRK-------------LKRQDGITKDASDVLPTNNIL---- 504
             ES  R KRGRP+GSKD+ PRK             +K  D    D S  L    I+    
Sbjct: 839  -ESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEETIKMTDQFKIDKSIALDEAQIMQKAP 897

Query: 503  ---XXXXXXXXXXXXXXXXNKDEHNDKGI-------SNSEISLNYASTKKQWNRKDIIID 354
                                +D H ++          N EIS++Y    ++W+R +I+I+
Sbjct: 898  EEVHIEQEAPEEAHIEQETPEDPHIEREAPEEAQVPENCEISVSYVQKGEKWDRNNIVIN 957

Query: 353  EVFSYSIAIEMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPN 174
             +F++ +A ++I ++ D EPR ++ECR R+DWPKWKE IQAEL SL KREVFG + +TP 
Sbjct: 958  NIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPE 1017

Query: 173  DVKPIGYRWVFVRKRNEKNEIVRYKARLVAQGFSQIP 63
            DVKP+GY+WVFVRKRNE NEI+RYK RLVAQGFSQ P
Sbjct: 1018 DVKPVGYKWVFVRKRNENNEIIRYKXRLVAQGFSQRP 1054


>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1508

 Score =  422 bits (1085), Expect = e-115
 Identities = 213/413 (51%), Positives = 283/413 (68%), Gaps = 22/413 (5%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            ILHA  LIRLRPT+   FS  Q+V+G EPN+SHL+ FGCAVYVPIAPPQRTKMGPQRRLG
Sbjct: 633  ILHASVLIRLRPTATQPFSASQMVTGYEPNVSHLRIFGCAVYVPIAPPQRTKMGPQRRLG 692

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDK-ADQRNKEIEITWNATQ 819
            +YVG++ P+II+Y+EP+ GDLFTARF DCHF+ET FP+LGGDK  + + +  E++W+   
Sbjct: 693  VYVGYDSPTIIRYIEPLIGDLFTARFADCHFDETVFPSLGGDKNINVQQERPELSWSVPT 752

Query: 818  LAMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIP----- 654
            L+ LDPRT   E EV++I+ LQ++A  +PDAF+DI KVT+SHIPA N PARI++P     
Sbjct: 753  LSHLDPRTAQSEIEVRRILDLQNVAESMPDAFSDIAKVTRSHIPAANVPARIDVPKSRGH 812

Query: 653  ----------------TESKVNERESIARRKRGRPLGSKDLKPRKLKRQDGITKDASDVL 522
                             +  V  R +   RKRGRP+GS+D +PRK   +  + ++   ++
Sbjct: 813  DANSRMHEHGANVPSLNDGDVMARPTAPARKRGRPIGSRDSRPRK---KASLAQNNPLII 869

Query: 521  PTNNILXXXXXXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFS 342
              NN                       ++    N EIS+NY S  +  +R  + ID+ F+
Sbjct: 870  DINN-PSHENIPDYGYVQETSLGDAPMSEPTPENREISINYTSVHEMMDRNSMAIDDAFA 928

Query: 341  YSIAIEMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKP 162
            Y IA + I + +D+EPR+++EC++R DWPKWK+ IQ EL SL KR+VFG + +TP  VKP
Sbjct: 929  YHIA-KGIIEYDDIEPRSVEECQRRADWPKWKDAIQVELDSLTKRQVFGPVTQTPPSVKP 987

Query: 161  IGYRWVFVRKRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            +G++WVFVRKRNEKNE+VRYK+RLVAQGFSQ PGIDYEETYSPV+D  T R+L
Sbjct: 988  VGHKWVFVRKRNEKNEVVRYKSRLVAQGFSQRPGIDYEETYSPVMDVITFRYL 1040


>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score =  419 bits (1078), Expect = e-115
 Identities = 212/397 (53%), Positives = 275/397 (69%), Gaps = 6/397 (1%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            +LHA  LI++RPT+YH +SPLQL+ G EPNI HL+ FGCAVY PI P  RT MGPQR+LG
Sbjct: 345  VLHAAALIQIRPTAYHDYSPLQLLRGVEPNIFHLRVFGCAVYTPIPPTNRTSMGPQRKLG 404

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            IYVG+E PSIIKYLEPMTGD FTAR+ DC F+E  FP LGGDK+    K  EI+W+   L
Sbjct: 405  IYVGYESPSIIKYLEPMTGDQFTARYADCIFDEDHFPALGGDKSPYLTKCREISWDEKDL 464

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
              LDPRT+  E EV+KI++LQ++AN LPDAFTD + VT+SHIPA NAP+R+E+P  S ++
Sbjct: 465  QYLDPRTSQTELEVQKIINLQNLANNLPDAFTDNRGVTRSHIPAVNAPSRVEVPKGSGMH 524

Query: 635  ERESIARRKRGRPLGSKDLKPRKL---KRQDGITKDAS---DVLPTNNILXXXXXXXXXX 474
              ++  R+KRGRP+G+KDL PRK    K    + K+ S   D  P+ +            
Sbjct: 525  -TDTPHRQKRGRPVGAKDLNPRKTRIGKISQSLPKNFSRPEDGEPSESARALNKLNTGNA 583

Query: 473  XXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDENDMEP 294
                       ND    N E ++N+  T + +NR  I++D+ F+Y++A  +  +  D EP
Sbjct: 584  EHPDQNILGNDNDLVDINIETAINFVDTGETYNRDLIVVDDTFAYAVAHNIPHNNLDPEP 643

Query: 293  RTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNEKNE 114
            ++I EC+KR DW KWKE I+AEL SL KR+VFG    TP DV P+G +WVFVRKRNE NE
Sbjct: 644  KSITECQKRPDWLKWKEAIEAELNSLNKRKVFGPTVLTPKDVIPVGSKWVFVRKRNENNE 703

Query: 113  IVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            +VRYKARLVAQGF+Q PGID+E+TYSPV+D  + R+L
Sbjct: 704  VVRYKARLVAQGFTQRPGIDFEQTYSPVIDGISFRYL 740


>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
          Length = 1190

 Score =  419 bits (1078), Expect = e-115
 Identities = 212/397 (53%), Positives = 275/397 (69%), Gaps = 6/397 (1%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            +LHA  LI++RPT+YH +SPLQL+ G EPNI HL+ FGCAVY PI P  RT MGPQR+LG
Sbjct: 345  VLHAAALIQIRPTAYHDYSPLQLLRGVEPNIFHLRVFGCAVYTPIPPTNRTSMGPQRKLG 404

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            IYVG+E PSIIKYLEPMTGD FTAR+ DC F+E  FP LGGDK+    K  EI+W+   L
Sbjct: 405  IYVGYESPSIIKYLEPMTGDQFTARYADCIFDEDHFPALGGDKSPYLTKCREISWDEKDL 464

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
              LDPRT+  E EV+KI++LQ++AN LPDAFTD + VT+SHIPA NAP+R+E+P  S ++
Sbjct: 465  QYLDPRTSQTELEVQKIINLQNLANNLPDAFTDNRGVTRSHIPAVNAPSRVEVPKGSGMH 524

Query: 635  ERESIARRKRGRPLGSKDLKPRKL---KRQDGITKDAS---DVLPTNNILXXXXXXXXXX 474
              ++  R+KRGRP+G+KDL PRK    K    + K+ S   D  P+ +            
Sbjct: 525  -TDTPHRQKRGRPVGAKDLNPRKTRIGKISQSLPKNFSRPEDGEPSESARALNKLNTGNA 583

Query: 473  XXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDENDMEP 294
                       ND    N E ++N+  T + +NR  I++D+ F+Y++A  +  +  D EP
Sbjct: 584  EHPDQNILGNDNDLVDINIETAINFVDTGETYNRDLIVVDDTFAYAVAHNIPHNNLDPEP 643

Query: 293  RTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNEKNE 114
            ++I EC+KR DW KWKE I+AEL SL KR+VFG    TP DV P+G +WVFVRKRNE NE
Sbjct: 644  KSITECQKRPDWLKWKEAIEAELNSLNKRKVFGPTVLTPKDVIPVGSKWVFVRKRNENNE 703

Query: 113  IVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            +VRYKARLVAQGF+Q PGID+E+TYSPV+D  + R+L
Sbjct: 704  VVRYKARLVAQGFTQRPGIDFEQTYSPVIDGISFRYL 740


>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
          Length = 1383

 Score =  398 bits (1023), Expect = e-108
 Identities = 199/398 (50%), Positives = 263/398 (66%), Gaps = 7/398 (1%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            I+HA  L+R+RPT+YH++SP QLV GK+PNISHL+ FGCAVYVPIAP QRTK GPQRRL 
Sbjct: 612  IMHATALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKTGPQRRLE 671

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            +YVGF+ PSII+YLEP+T D+FTARF DCHFNE+ FP+LG +K+    +  EI W A+ +
Sbjct: 672  VYVGFDSPSIIRYLEPLTSDVFTARFADCHFNESVFPSLGKEKSIPEERR-EIIWKASTM 730

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
              LDPRTN CE EV++I+HLQ++ NQLPDAF DIKKVTKSHIP  N  ARI++P     N
Sbjct: 731  THLDPRTNQCELEVQRIIHLQNLTNQLPDAFIDIKKVTKSHIPTANTSARIDVPVGQLTN 790

Query: 635  ERESIARRKRGRPLGSKDLKPRKLKRQDGITKDASDVLPTNNILXXXXXXXXXXXXXXXX 456
              ES  R KRGRP+GSKD+ PRK + Q+ +      +  T+ +                 
Sbjct: 791  --ESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEDTIKMTDQVKIDKSIALEEAQIMQKT 848

Query: 455  NKDEHNDKGI-------SNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDENDME 297
             ++ H ++          N EIS++Y  T ++W+R +I+I+ +F++ +  ++I ++ D E
Sbjct: 849  LEEAHIEQEAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVTSDIIRNDEDPE 908

Query: 296  PRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNEKN 117
            PR ++E                               +TP DVKP+GY+WVFVRKRNE N
Sbjct: 909  PRNVEE------------------------------FQTPEDVKPVGYKWVFVRKRNENN 938

Query: 116  EIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            +I+RYKARLV QGFSQ PGIDYEETYSPV++A T RFL
Sbjct: 939  KIIRYKARLVVQGFSQRPGIDYEETYSPVMNAITFRFL 976


>ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292366 [Fragaria vesca
            subsp. vesca]
          Length = 611

 Score =  396 bits (1018), Expect = e-108
 Identities = 212/416 (50%), Positives = 278/416 (66%), Gaps = 25/416 (6%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            ILHA  LIR RPT+   FS  QLV+G EP+ISHL+ FGC+VYVPI PP R+KMG QRRLG
Sbjct: 14   ILHAALLIRFRPTAKQPFSAYQLVTGYEPDISHLRIFGCSVYVPITPPLRSKMGHQRRLG 73

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEI-----EITW 831
            IYVG+E P+II+YLEP+TGDLFTARFVDCHF+ET FP+LGGD    RNK +     E++W
Sbjct: 74   IYVGYESPTIIRYLEPLTGDLFTARFVDCHFDETLFPSLGGD----RNKRVHVERHELSW 129

Query: 830  NATQLAMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPT 651
                L+  DPRT+  E+EVK+I+ LQ +A+ +PD+F++I KVT+S IPA N PAR+E+P 
Sbjct: 130  FVPTLSHYDPRTSQSEREVKRILELQKVADTMPDSFSEITKVTRSDIPAANVPARLEVPK 189

Query: 650  ESKV---------------NERESIA-RRKRGRPLGSKDLKPRKLK----RQDGITKDAS 531
            +                     E++A +RKR RP GS D++ RK +    R + +  D  
Sbjct: 190  KGTAIPGLGTAAVGGAAHGGGMEAVALQRKRWRPPGSVDMRSRKKQTDKARVNSLIIDVE 249

Query: 530  DVLPTNNILXXXXXXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDE 351
            +  P++ I+                     +     N EIS+ Y +T +  NR    +D+
Sbjct: 250  N--PSHEIISDYSYVHELILESMGDASGSMSTS--ENIEISMCYDNTYELMNRSSTHVDD 305

Query: 350  VFSYSIAIEMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPND 171
            +F+YS A E+I + ND+EPR++ EC+ R DWPKWK  IQAEL SL KR+VFG +  TP  
Sbjct: 306  IFAYSAAHEII-EHNDIEPRSVAECQNRADWPKWKVAIQAELDSLTKRQVFGPVVLTPPS 364

Query: 170  VKPIGYRWVFVRKRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            VKP+G++WVFVRK NEKNE++RYKARLVAQGFSQ PGI+YEETYSPV+D  T R+L
Sbjct: 365  VKPVGHKWVFVRKHNEKNEVLRYKARLVAQGFSQRPGINYEETYSPVMDVITFRYL 420


>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
            vesca subsp. vesca]
          Length = 521

 Score =  390 bits (1002), Expect = e-106
 Identities = 209/409 (51%), Positives = 274/409 (66%), Gaps = 20/409 (4%)
 Frame = -3

Query: 1169 HAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLGIY 990
            HA  LIR RPT+   FS  QLV+G EP+ISHL+ FGC+VYVPI PP R+KMGP RRLGIY
Sbjct: 4    HAALLIRFRPTAKQPFSAYQLVTGYEPDISHLRIFGCSVYVPITPPLRSKMGPHRRLGIY 63

Query: 989  VGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGD--KADQRNKEIEITWNATQL 816
            VG+E  +II+YLEP+TGDLFTARF DCHF+ET FP+LGGD  K D   ++ E++W    L
Sbjct: 64   VGYESLTIIRYLEPLTGDLFTARFADCHFDETLFPSLGGDTNKRDHVERQ-ELSWFVPTL 122

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKV- 639
            +  DP T+  E+EVK I+ LQ +A+ +PD+F++I KVT+S IPA N PAR+E+P +    
Sbjct: 123  SHYDPHTSQSEREVKCILELQKVADTMPDSFSEIAKVTRSDIPAANVPARLEVPRKGTAI 182

Query: 638  --------------NERESIA-RRKRGRPLGSKDLKPRK-LKRQDGITKDASDVL-PTNN 510
                             E++A +RKRGRP GS D++PRK L  +  +     DV  P++ 
Sbjct: 183  PGLGTAAVDGAAHGGGMEAVAPQRKRGRPPGSVDMRPRKKLTDKAQVNPLIIDVENPSHE 242

Query: 509  ILXXXXXXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIA 330
            I+                     +     N EIS+ Y +T +  NR    +D++F+YS+A
Sbjct: 243  IISDYSYVHELILESMGYASGSMSTS--ENIEISMCYDNTYELMNRSSTHVDDIFAYSVA 300

Query: 329  IEMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYR 150
             E+I + +D+EPR++ EC+ R DWPKWK  IQAEL SL KR+VFG +  TP  VKP+G++
Sbjct: 301  HEII-EHDDIEPRSVAECQNRADWPKWKVAIQAELDSLTKRQVFGPVMLTPPSVKPVGHK 359

Query: 149  WVFVRKRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            WVFVRKRNEKNE++ YKARLVAQGFSQ PGIDYEETYSPV+D  T R+L
Sbjct: 360  WVFVRKRNEKNEVLLYKARLVAQGFSQRPGIDYEETYSPVMDVITFRYL 408


>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
          Length = 2242

 Score =  378 bits (970), Expect = e-102
 Identities = 203/413 (49%), Positives = 262/413 (63%), Gaps = 22/413 (5%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            ILHA  LI LRPT+   FS  Q+V+G EPN+SHL+ FGCAVYVPIAPPQRTKMGPQRRLG
Sbjct: 690  ILHAAVLICLRPTATQPFSASQMVTGYEPNVSHLRIFGCAVYVPIAPPQRTKMGPQRRLG 749

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDK-ADQRNKEIEITWNATQ 819
            IYVG++ P+II+Y+EP+TGDLFTARF DCHF+ET FP+LGGDK  + + +  E++W+   
Sbjct: 750  IYVGYDSPTIIRYIEPLTGDLFTARFADCHFDETVFPSLGGDKNINVQQERQELSWSVPT 809

Query: 818  LAMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTE--- 648
            L+ LDPRT   E EV++I+ LQ++A  +PDAF+DI KVT+SHIPA N PARIE+P     
Sbjct: 810  LSHLDPRTAQSEIEVRRILDLQNVAESMPDAFSDIAKVTRSHIPAANVPARIEVPKSRGH 869

Query: 647  -------------SKVNERESIAR-----RKRGRPLGSKDLKPRKLKRQDGITKDASDVL 522
                           +N+ +++AR     RKRGRP+ +                DA    
Sbjct: 870  DANSRMHEHGANVPSLNDGDAMARPTAPARKRGRPIETS-------------LGDAPMSE 916

Query: 521  PTNNILXXXXXXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFS 342
            PT                               N EIS+NY S  +  +R  + ID+ F+
Sbjct: 917  PTP-----------------------------ENREISINYTSVHEMMDRNSMAIDDAFA 947

Query: 341  YSIAIEMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKP 162
            Y IA + I + +D+EPR+++EC++R DWPKWK+ IQ                 TP  VKP
Sbjct: 948  YHIA-KGIIEYDDIEPRSVEECQRRADWPKWKDAIQ-----------------TPPSVKP 989

Query: 161  IGYRWVFVRKRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            +G++WVFVRKRNEKNE+VRYKARLVAQGFSQ PGIDY+ETYSPV+D  T R+L
Sbjct: 990  VGHKWVFVRKRNEKNEVVRYKARLVAQGFSQRPGIDYDETYSPVMDVITFRYL 1042


>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
          Length = 1360

 Score =  374 bits (959), Expect = e-101
 Identities = 190/361 (52%), Positives = 243/361 (67%)
 Frame = -3

Query: 1085 ISHLKTFGCAVYVPIAPPQRTKMGPQRRLGIYVGFECPSIIKYLEPMTGDLFTARFVDCH 906
            I H   F   +YVPIAP QRTKMGPQRRLG+YVGF+ PSII+YLEP+TGD+FTARF DCH
Sbjct: 559  IMHAAAF---IYVPIAPTQRTKMGPQRRLGVYVGFDSPSIIRYLEPLTGDVFTARFXDCH 615

Query: 905  FNETTFPTLGGDKADQRNKEIEITWNATQLAMLDPRTNSCEQEVKKIVHLQSIANQLPDA 726
            FNE+ FP+LG +K+    +  EI+W  + +  LDPRTN CE EV++I+HLQ++ANQLPDA
Sbjct: 616  FNESVFPSLGREKSIPEERR-EISWKTSTMTHLDPRTNQCELEVQRIIHLQNLANQLPDA 674

Query: 725  FTDIKKVTKSHIPAENAPARIEIPTESKVNERESIARRKRGRPLGSKDLKPRKLKRQDGI 546
            F D KKVTKSHIPA N PA I++P     N  ES  R KRGRP+GSKD+ PRK + Q+ +
Sbjct: 675  FIDTKKVTKSHIPAANTPAXIDVPXGXLTN--ESKIRLKRGRPVGSKDVTPRKRRTQEKL 732

Query: 545  TKDASDVLPTNNILXXXXXXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKD 366
                  +  T+                    ++ H ++  +  E  +   + +     ++
Sbjct: 733  XTLEEAIKMTDQFKIDKSIALEEAQIMQKAPEEVHIEQE-APEEAHIEQETPEDPHIERE 791

Query: 365  IIIDEVFSYSIAIEMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMC 186
               +     ++A ++I ++ D EPR  +ECR R+DWPKWK  I  EL SL KREVFG + 
Sbjct: 792  APEEAQVPENLASDIIRNDEDPEPRNXEECRHRNDWPKWKXAIXXELNSLTKREVFGPVV 851

Query: 185  ETPNDVKPIGYRWVFVRKRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRF 6
            +TP DVKP+GY+WVFV KRNE NEI+RYKARLVAQGFSQ PGIDYEETYSPV+DA T RF
Sbjct: 852  QTPEDVKPVGYKWVFVXKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRF 911

Query: 5    L 3
            L
Sbjct: 912  L 912


>gb|AAL68851.1|AF466199_10 putative copia polyprotein [Sorghum bicolor]
          Length = 1082

 Score =  371 bits (953), Expect = e-100
 Identities = 198/404 (49%), Positives = 260/404 (64%), Gaps = 13/404 (3%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            +LH   LI+LRPT+YH  SPLQLV G  P+ISHL+ FGCA YVPI+PP+RT MGP R+LG
Sbjct: 294  VLHTAELIQLRPTAYHATSPLQLVHGNPPSISHLRKFGCATYVPISPPKRTTMGPYRKLG 353

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            IYVG++ PSIIKYLEP TGDLFTAR+ DC FNE  FP LGGD    +  + +I W+A  +
Sbjct: 354  IYVGYKSPSIIKYLEPTTGDLFTARYTDCIFNEDHFPALGGDLPHHKQCQ-KINWDAPNI 412

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
               DP T+  E +V+KI++LQ IAN +PDAFTD K VTKS+ PA N P R+E+P  +K  
Sbjct: 413  PNSDPHTSESELQVQKIINLQHIANNVPDAFTDYKGVTKSYNPARNVPERVEVP--NKTT 470

Query: 635  ERESIARRKRGR------PLGSKDLKPRKLKRQDGIT-------KDASDVLPTNNILXXX 495
            +  S    KRGR         S   + RK K  D +        K   +V P++      
Sbjct: 471  QLPS----KRGRSTAISTDTASSKQRKRKTKSSDPVNAAQPHVEKHPMEVQPSHPTSTVH 526

Query: 494  XXXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMIS 315
                             +ND      EIS+NYA T + ++RK  I+D  FS ++ +E++ 
Sbjct: 527  SITDAGTSEYPDATILGNNDASKRVHEISINYAETGESFDRKTTIVDSYFS-AMIVEIL- 584

Query: 314  DENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVR 135
             END +P+T+ EC+ R DW +WK+ IQAE+ SL KR+VF ++  TP  V P+G++WVFVR
Sbjct: 585  -ENDPDPKTMAECKTRSDWNQWKDAIQAEISSLTKRQVFSQVIPTPPQVFPVGFKWVFVR 643

Query: 134  KRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            KRNE NE+VR+KARLVAQGF+Q PGID+ ETYSPV+   T R+L
Sbjct: 644  KRNENNEVVRHKARLVAQGFTQRPGIDFNETYSPVMGGITFRYL 687


>gb|ABF96131.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1275

 Score =  356 bits (913), Expect = 1e-95
 Identities = 190/403 (47%), Positives = 259/403 (64%), Gaps = 12/403 (2%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            +LHA  L++LRPT+YH+ SP+QLV G  P+ISHL+ FGCAVY+PI+PPQRT MGP R++G
Sbjct: 620  VLHAADLVQLRPTAYHETSPMQLVRGNPPSISHLRKFGCAVYIPISPPQRTAMGPHRKVG 679

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            IYVGF+ PSIIKYLEP+TGDLFT RF D  F+E  FP LGG+    +  + EI W+A  +
Sbjct: 680  IYVGFKSPSIIKYLEPLTGDLFTTRFADSIFDEEHFPALGGEFKYHKECQ-EIDWDAQGI 738

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTE---- 648
               +PRT     +V+KI+HLQ +AN LPD FT+ K VTKS IPA+NAP R+E+  +    
Sbjct: 739  PASNPRTTETGLQVQKIIHLQRLANNLPDKFTNYKGVTKSFIPAQNAPERVEVQNKTTQL 798

Query: 647  --------SKVNERESIARRKRGRPLGSKDLKPRKLKRQDGITKDASDVLPTNNILXXXX 492
                    S   +RE+IA ++R     ++ L      + D I +   D L  ++++    
Sbjct: 799  PLTKKRGRSMATQRETIANKQRKTVNANQPLV--GTHQIDTIYQADRDSLQPSSVV--HN 854

Query: 491  XXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISD 312
                           +HN+  I   EI++NY+ T + ++R+  I+D  FS  IA  +   
Sbjct: 855  AETRNSEDHRHIVSGDHNE-SIRVDEIAINYSETGESFDRRATIVDTNFSEQIAECL--- 910

Query: 311  ENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRK 132
            + D EPR+I EC+K  DW KWK+ I AEL SL KR+VF  +  T   + P+GY+WVFVRK
Sbjct: 911  QVDPEPRSIKECQKCSDWNKWKDAIDAELASLYKRDVFSGVMPTHRGIFPVGYKWVFVRK 970

Query: 131  RNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            RNE NE+VRYKARL+AQGF+Q PG+D+ ETYSPV+   T R+L
Sbjct: 971  RNENNEVVRYKARLIAQGFTQKPGVDFNETYSPVMSGITFRYL 1013


>emb|CAN77860.1| hypothetical protein VITISV_005456 [Vitis vinifera]
          Length = 721

 Score =  352 bits (904), Expect = 1e-94
 Identities = 184/392 (46%), Positives = 249/392 (63%), Gaps = 2/392 (0%)
 Frame = -3

Query: 1172 LHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLGI 993
            +HA TL+R+RPT+YH++S  QLV GK+PNI HL+ FGCAVYV IAP QR KMGPQRRLGI
Sbjct: 1    MHAVTLVRIRPTTYHEYSHSQLVLGKQPNIFHLQIFGCAVYVSIAPTQRIKMGPQRRLGI 60

Query: 992  YVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQLA 813
            YVGF+  SII+YL+P+T ++FTARF DCHFNE+ FP+LG +K+    +  E++W  + + 
Sbjct: 61   YVGFDSSSIIRYLKPLTDNVFTARFADCHFNESVFPSLGREKSIPEERR-EVSWKTSTMT 119

Query: 812  MLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVNE 633
             LD  T   E +V++I+HLQ++ANQLPDAF D KK+TKSHIPA N P RI++P     NE
Sbjct: 120  HLDLLTKQRELQVQRIIHLQNLANQLPDAFIDTKKMTKSHIPATNTPTRIDVPIGQLTNE 179

Query: 632  RESIARRKRGRPLGSKDLKPRKLKRQD--GITKDASDVLPTNNILXXXXXXXXXXXXXXX 459
             + +   K GRP+GSKD+ PRK + Q   G  ++A  +                      
Sbjct: 180  SKILL--KCGRPIGSKDVTPRKRRTQKKLGTLEEAQIMQKAPEEAHIEQKAHEKPHIERE 237

Query: 458  XNKDEHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDENDMEPRTIDE 279
              +     K   N EIS++Y  T ++W+R +I+I+ +F++ +A  +I ++ D EPRT++E
Sbjct: 238  ALEKAQVPK---NCEISVSYVHTGEKWDRNNIVINNIFAFQVASNIIRNDEDPEPRTVEE 294

Query: 278  CRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVRKRNEKNEIVRYK 99
                                           +TP +VKP+GY+ VFVR RNEKNEI+RYK
Sbjct: 295  ------------------------------FQTPENVKPVGYKLVFVRNRNEKNEIIRYK 324

Query: 98   ARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
             RLVAQGFSQ P IDYEETYSP++D  T  FL
Sbjct: 325  VRLVAQGFSQRPRIDYEETYSPIMDVITFHFL 356


>ref|XP_004237326.1| PREDICTED: uncharacterized protein LOC101252478 [Solanum
            lycopersicum]
          Length = 753

 Score =  351 bits (900), Expect = 4e-94
 Identities = 183/348 (52%), Positives = 237/348 (68%), Gaps = 3/348 (0%)
 Frame = -3

Query: 1037 PPQRTKMGPQRRLGIYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQ 858
            PPQRTKMGPQRRLGIYVGFE PSII+YLE +TGDLFTA F DC F+ET FP  GG+K   
Sbjct: 162  PPQRTKMGPQRRLGIYVGFESPSIIRYLESLTGDLFTAIFADCRFDETNFPQFGGEKNKH 221

Query: 857  RNKEIEITWNATQLAMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAEN 678
            ++   EI    + L+  DPR+  CEQEV+KI+HLQ+IANQ+PD FTD K++TKSHIPA N
Sbjct: 222  KS---EIACKVSSLSHFDPRSPVCEQEVQKIIHLQNIANQMPDTFTDSKRITKSHIPAVN 278

Query: 677  APARIEIP--TESKVNERESIARRKRGRPLGSKDLKPRKLKRQDGITKDASDVLPTNNIL 504
             P RI++P    +     ES  R K GRP GSKD  PRK   ++  TK+  +   T +++
Sbjct: 279  VPIRIDVPKGPSTSAIASESQIRLKLGRPFGSKDKNPRKRSIKNDTTKEFHE--KTQDMI 336

Query: 503  XXXXXXXXXXXXXXXXNKDEHNDKGISNSEISLNYASTKK-QWNRKDIIIDEVFSYSIAI 327
                             ++    +   N E+SL+ ++ +    +R  I +D VF+Y I++
Sbjct: 337  ------------NPDIPEEISEPETQVNEELSLSSSTGEGISLDRSKITVDNVFAYDISL 384

Query: 326  EMISDENDMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRW 147
             ++    D+EP +++ECR+R D PKW+E IQ+EL SL KREV G + +TP+DVKPIGY+W
Sbjct: 385  NIMQGNEDLEPLSVEECRQRCDLPKWEEVIQSELNSLAKREVLGPVVQTPSDVKPIGYKW 444

Query: 146  VFVRKRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
            VFVRKRNEKNEIVRYKA LV QGFSQ PG+DYEETY PV+DA T R+L
Sbjct: 445  VFVRKRNEKNEIVRYKACLVEQGFSQRPGVDYEETYLPVMDAITFRYL 492


>gb|ABF67931.1| Elote1 putative polyprotein [Zea mays]
          Length = 1185

 Score =  348 bits (894), Expect = 2e-93
 Identities = 192/405 (47%), Positives = 252/405 (62%), Gaps = 14/405 (3%)
 Frame = -3

Query: 1175 ILHAETLIRLRPTSYHKFSPLQLVSGKEPNISHLKTFGCAVYVPIAPPQRTKMGPQRRLG 996
            +LHA  LI+ RP++YH  SP QL  G++P +SHL+ F CAVYVPI+PPQRT MGP R+LG
Sbjct: 343  VLHAAALIQYRPSAYHSASPHQLTRGQQPVVSHLRKFSCAVYVPISPPQRTSMGPHRKLG 402

Query: 995  IYVGFECPSIIKYLEPMTGDLFTARFVDCHFNETTFPTLGGDKADQRNKEIEITWNATQL 816
            IYVG+E  SIIKYLEP TGDLFTAR+ D  F+E  FPTLGG       +  EI W+A+ +
Sbjct: 403  IYVGYESLSIIKYLEPRTGDLFTARYADSIFDEEHFPTLGGGLYLNNKECREIEWSASSI 462

Query: 815  AMLDPRTNSCEQEVKKIVHLQSIANQLPDAFTDIKKVTKSHIPAENAPARIEIPTESKVN 636
              LDPRT   E EV++I+HLQ++AN LPDAFTDI  V+KSHIPA NAP R+EIP +   +
Sbjct: 463  QSLDPRTRETELEVQRIIHLQNLANNLPDAFTDIIGVSKSHIPAANAPERVEIPLQGMDS 522

Query: 635  ERESIARRKRGRPLGSKDLKPRKLKRQ---DGITKDASDVLPTNNILXXXXXXXXXXXXX 465
             R    R++  +P  S   K  +L +Q   +  T+  SDV    ++              
Sbjct: 523  TRTPHPRKRGRKPDDSVSAKRGRLHQQVTEENATRFISDVPAATHLEGERPSANVRINKS 582

Query: 464  XXXNKD-------EHNDKGISNSEISLNYASTKKQWNRKDIIIDEVFSYSIAIEMISDEN 306
               ++         HN    S  EI++NY  T + +NRK  ++D  F   IA+ +  D  
Sbjct: 583  TRTSEQPVSNNLGNHNKPDDSVEEIAINYVETGELYNRKTTVVDTDFVSMIAVVIAEDP- 641

Query: 305  DMEPRTIDECRKRHDWPKWKETIQAELKSLEKREVFGRMCETPNDVKPIGYRWVFVR--- 135
              EP+++ EC+KR DW KWKE I+ EL SL KR+VFG +  TP    P   + + VR   
Sbjct: 642  --EPKSMAECQKRSDWVKWKEAIETELLSLSKRQVFGPVAHTPPQCYPSRVQ-MGVRPKE 698

Query: 134  -KRNEKNEIVRYKARLVAQGFSQIPGIDYEETYSPVVDATTLRFL 3
             KR+  NE+VRYKARLVAQGF+Q P IDY+ETYSPV+  TT R+L
Sbjct: 699  GKRDANNEVVRYKARLVAQGFTQRPDIDYDETYSPVMSGTTFRYL 743