BLASTX nr result

ID: Achyranthes22_contig00048742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00048742
         (327 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284586.1| PREDICTED: psbP domain-containing protein 5,...    70   3e-10
ref|XP_002309586.2| hypothetical protein POPTR_0006s26270g [Popu...    57   2e-06

>ref|XP_002284586.1| PREDICTED: psbP domain-containing protein 5, chloroplastic [Vitis
           vinifera] gi|296081930|emb|CBI20935.3| unnamed protein
           product [Vitis vinifera]
          Length = 284

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = +3

Query: 123 NLFCFRNQINFPVFRSKCKSKPKIIAFSCNPQTPTSEIGYCKRDLLLFSLSTSVALIFPP 302
           NL  FRN     V + KC    KII+ SC P  P S+IG+ +RDL+LF  S+S ALIFPP
Sbjct: 8   NLLIFRNHTRTMVNQKKCGLPEKIISCSCVPSRPNSKIGFYRRDLILFGFSSSAALIFPP 67

Query: 303 YGTGANEE 326
            G G  EE
Sbjct: 68  SGYGTEEE 75


>ref|XP_002309586.2| hypothetical protein POPTR_0006s26270g [Populus trichocarpa]
           gi|550337123|gb|EEE93109.2| hypothetical protein
           POPTR_0006s26270g [Populus trichocarpa]
          Length = 295

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
 Frame = +3

Query: 60  MATVFLSSSPHFFNSLTQSPVNLFCFRNQINFPVFRSKCKSKPKIIAFSC--NPQTPTSE 233
           MA   L S  HF    T    N F FRNQ    + + KCK K KI+A SC  +   P+ +
Sbjct: 1   MAMALLCSPSHF----TTHHHNPF-FRNQSRILLSQKKCKLKEKIMACSCACSSSDPSLQ 55

Query: 234 IGYCKRDLLLFSLSTSVALIFPPYGTGANEE 326
            G+C+RDL+LF LS+S+++ FP     A E+
Sbjct: 56  NGFCRRDLVLFGLSSSLSIAFPSSEILAEED 86


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