BLASTX nr result
ID: Achyranthes22_contig00048131
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Achyranthes22_contig00048131 (312 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citr... 50 4e-06 ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267... 54 4e-06 emb|CBI34155.3| unnamed protein product [Vitis vinifera] 54 4e-06 gb|EOY11072.1| Mediator of RNA polymerase II transcription subun... 56 6e-06 >ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citrus clementina] gi|568835227|ref|XP_006471680.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14-like [Citrus sinensis] gi|557535047|gb|ESR46165.1| hypothetical protein CICLE_v10000014mg [Citrus clementina] Length = 1820 Score = 50.4 bits (119), Expect(2) = 4e-06 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77 +L+EKSK+ + SD + INLLK+IVK+QQ L LN + K CQQ Sbjct: 28 ELVEKSKTGEESDTDKKINLLKYIVKTQQRMLRLNVLAKWCQQ 70 Score = 25.4 bits (54), Expect(2) = 4e-06 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%) Frame = -1 Query: 273 GSWGQETVALS---SRATKDAFISLK 205 G GQ+TV S SRA +D+F SLK Sbjct: 2 GELGQQTVPFSTLVSRAAEDSFASLK 27 >ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera] Length = 1758 Score = 54.3 bits (129), Expect(2) = 4e-06 Identities = 29/43 (67%), Positives = 32/43 (74%) Frame = -3 Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77 DLME SKSSD SD E I+LLKFIVK+QQ L LN + K CQQ Sbjct: 28 DLMEISKSSDQSDSEKKISLLKFIVKTQQRMLRLNVLAKWCQQ 70 Score = 21.6 bits (44), Expect(2) = 4e-06 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 3/23 (13%) Frame = -1 Query: 264 GQETVALS---SRATKDAFISLK 205 G +TV S SRA +++F+SLK Sbjct: 5 GHQTVEFSTLVSRAAEESFLSLK 27 >emb|CBI34155.3| unnamed protein product [Vitis vinifera] Length = 1724 Score = 54.3 bits (129), Expect(2) = 4e-06 Identities = 29/43 (67%), Positives = 32/43 (74%) Frame = -3 Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77 DLME SKSSD SD E I+LLKFIVK+QQ L LN + K CQQ Sbjct: 28 DLMEISKSSDQSDSEKKISLLKFIVKTQQRMLRLNVLAKWCQQ 70 Score = 21.6 bits (44), Expect(2) = 4e-06 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 3/23 (13%) Frame = -1 Query: 264 GQETVALS---SRATKDAFISLK 205 G +TV S SRA +++F+SLK Sbjct: 5 GHQTVEFSTLVSRAAEESFLSLK 27 >gb|EOY11072.1| Mediator of RNA polymerase II transcription subunit 14 [Theobroma cacao] Length = 1813 Score = 55.8 bits (133), Expect = 6e-06 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = -3 Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77 +L+EKSKSSD SD E INLLK+IVK+QQ L LN + K CQQ Sbjct: 28 ELVEKSKSSDQSDTEKKINLLKYIVKTQQRMLRLNVLAKWCQQ 70