BLASTX nr result

ID: Achyranthes22_contig00048131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00048131
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citr...    50   4e-06
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...    54   4e-06
emb|CBI34155.3| unnamed protein product [Vitis vinifera]               54   4e-06
gb|EOY11072.1| Mediator of RNA polymerase II transcription subun...    56   6e-06

>ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citrus clementina]
           gi|568835227|ref|XP_006471680.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 14-like [Citrus
           sinensis] gi|557535047|gb|ESR46165.1| hypothetical
           protein CICLE_v10000014mg [Citrus clementina]
          Length = 1820

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = -3

Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77
           +L+EKSK+ + SD +  INLLK+IVK+QQ  L LN + K CQQ
Sbjct: 28  ELVEKSKTGEESDTDKKINLLKYIVKTQQRMLRLNVLAKWCQQ 70



 Score = 25.4 bits (54), Expect(2) = 4e-06
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -1

Query: 273 GSWGQETVALS---SRATKDAFISLK 205
           G  GQ+TV  S   SRA +D+F SLK
Sbjct: 2   GELGQQTVPFSTLVSRAAEDSFASLK 27


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score = 54.3 bits (129), Expect(2) = 4e-06
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = -3

Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77
           DLME SKSSD SD E  I+LLKFIVK+QQ  L LN + K CQQ
Sbjct: 28  DLMEISKSSDQSDSEKKISLLKFIVKTQQRMLRLNVLAKWCQQ 70



 Score = 21.6 bits (44), Expect(2) = 4e-06
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
 Frame = -1

Query: 264 GQETVALS---SRATKDAFISLK 205
           G +TV  S   SRA +++F+SLK
Sbjct: 5   GHQTVEFSTLVSRAAEESFLSLK 27


>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score = 54.3 bits (129), Expect(2) = 4e-06
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = -3

Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77
           DLME SKSSD SD E  I+LLKFIVK+QQ  L LN + K CQQ
Sbjct: 28  DLMEISKSSDQSDSEKKISLLKFIVKTQQRMLRLNVLAKWCQQ 70



 Score = 21.6 bits (44), Expect(2) = 4e-06
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
 Frame = -1

Query: 264 GQETVALS---SRATKDAFISLK 205
           G +TV  S   SRA +++F+SLK
Sbjct: 5   GHQTVEFSTLVSRAAEESFLSLK 27


>gb|EOY11072.1| Mediator of RNA polymerase II transcription subunit 14 [Theobroma
           cacao]
          Length = 1813

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -3

Query: 205 DLMEKSKSSDFSDVENNINLLKFIVKSQQHRLLLNFIDKRCQQ 77
           +L+EKSKSSD SD E  INLLK+IVK+QQ  L LN + K CQQ
Sbjct: 28  ELVEKSKSSDQSDTEKKINLLKYIVKTQQRMLRLNVLAKWCQQ 70


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