BLASTX nr result
ID: Achyranthes22_contig00048095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00048095
(445 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc... 100 3e-19
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap... 100 3e-19
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 97 2e-18
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 97 2e-18
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 96 4e-18
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc... 96 5e-18
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 96 6e-18
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 95 8e-18
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 95 1e-17
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 94 1e-17
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 90 3e-16
dbj|BAA22288.1| polyprotein [Oryza australiensis] 89 6e-16
gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group] 88 1e-15
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776... 85 1e-14
gb|EXB30189.1| hypothetical protein L484_000636 [Morus notabilis] 84 2e-14
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-... 84 2e-14
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group] 84 2e-14
gb|EXB95627.1| hypothetical protein L484_003312 [Morus notabilis] 82 1e-13
gb|EXB94191.1| Serine/threonine-protein kinase ATM [Morus notabi... 82 1e-13
gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii] 81 1e-13
>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 649
Score = 100 bits (248), Expect = 3e-19
Identities = 48/79 (60%), Positives = 57/79 (72%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL T ILLL+++EP TY+ AM PDSEKWLEAMKSE++ M NQ
Sbjct: 169 RSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEAMKSEIEFMHVNQ 228
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKW+
Sbjct: 229 VWNLVDPPDGVKAIECKWV 247
>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
Length = 637
Score = 100 bits (248), Expect = 3e-19
Identities = 48/79 (60%), Positives = 57/79 (72%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL T ILLL+++EP TY+ AM PDSEKWLEAMKSE++ M NQ
Sbjct: 169 RSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEAMKSEIEFMHVNQ 228
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKW+
Sbjct: 229 VWNLVDPPDGVKAIECKWV 247
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/79 (59%), Positives = 57/79 (72%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL + ILLL+++EP TY+ AM PD+EKWL AMKSE++SM NQ
Sbjct: 715 RSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIESMHVNQ 774
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKWI
Sbjct: 775 VWNLVDPPDGVKAIECKWI 793
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/79 (59%), Positives = 57/79 (72%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL + ILLL+++EP TY+ AM PD+EKWL AMKSE++SM NQ
Sbjct: 628 RSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIESMHVNQ 687
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKWI
Sbjct: 688 VWNLVDPPDGVKAIECKWI 706
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL T ILLL++++P TY+ AM PDS+KWL AMKSE++SM NQ
Sbjct: 447 RSERIWRTPARYALLTTGQRDILLLDNDKPTTYEEAMVGPDSKKWLGAMKSEIESMHVNQ 506
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKW+
Sbjct: 507 VWNLVDPPDGVKGIECKWV 525
>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 810
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL T ILLL+++EP Y+ AM PDSEKWL AMKS+++SM NQ
Sbjct: 472 RSKRIRRTPARYALLTTGQRDILLLDNDEPTIYEEAMVGPDSEKWLGAMKSKIESMHVNQ 531
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKW+
Sbjct: 532 VWNLVDPPDGVKAIKCKWV 550
>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/79 (58%), Positives = 54/79 (68%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R P RY LL ILLL+++EP TY+ M PDSEKWL AMKSE++SM NQ
Sbjct: 649 RSERTRRTPARYALLTIRQRDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQ 708
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKW+
Sbjct: 709 VWNLVDPPDGVKAIECKWV 727
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/79 (54%), Positives = 60/79 (75%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R P+R+ V +++ + ++ES+EP +Y+ A+ PDS+KWLEA KSEM+SMS+N+
Sbjct: 413 RSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESMSQNK 472
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VW LV+L DGVKPI CKWI
Sbjct: 473 VWTLVDLPDGVKPIECKWI 491
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/79 (58%), Positives = 55/79 (69%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL ILLL+++EP TY+ AM PDSEKW AMKSE++SM NQ
Sbjct: 1252 RSERIRRTPARYALLTIGQRDILLLDNDEPTTYEEAMVGPDSEKWPGAMKSEIESMHVNQ 1311
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ DGVK I CKW+
Sbjct: 1312 VWNLVDPPDGVKAIECKWV 1330
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 94.4 bits (233), Expect = 1e-17
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = -2
Query: 246 PHRSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSE 67
P RS R +P RY + ILLL ++EP TYK AM PDSEKWL AMKSE+DSM +
Sbjct: 766 PRRSKRPCQMPIRYA------HDILLLNNDEPNTYKEAMMDPDSEKWLGAMKSEIDSMRD 819
Query: 66 NQVWNLVNLSDGVKPI*CKWI 4
NQVWNLV+ DGVK I CKWI
Sbjct: 820 NQVWNLVDPLDGVKTIECKWI 840
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/79 (56%), Positives = 54/79 (68%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL T ILLL ++EP TY+ AM P SEKWL AMKS+++SM NQ
Sbjct: 320 RSERIRRTPARYALLTTGQCDILLLGNDEPTTYEEAMVGPGSEKWLGAMKSKIESMHVNQ 379
Query: 60 VWNLVNLSDGVKPI*CKWI 4
VWNLV+ D VK I CKW+
Sbjct: 380 VWNLVDPLDSVKAIECKWV 398
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/81 (55%), Positives = 55/81 (67%)
Frame = -2
Query: 246 PHRSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSE 67
P RS R P+RY E ILLL+++EP TY+ AM DS KWL AMKSE++SM +
Sbjct: 766 PRRSERSRRAPDRYT--GAEQRDILLLDNDEPKTYEEAMVGHDSNKWLGAMKSEIESMYD 823
Query: 66 NQVWNLVNLSDGVKPI*CKWI 4
NQVWNLV+ DGVK I CKW+
Sbjct: 824 NQVWNLVDPPDGVKTIECKWL 844
>gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 478
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/80 (53%), Positives = 56/80 (70%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
RS R+ P RY LL T ILLL++++P TY+ AM PDSEKWL AM SE++SM N+
Sbjct: 386 RSERIRRTPARYALLTTGQRDILLLDNDDPTTYEEAMVGPDSEKWLGAMISEIESMHVNE 445
Query: 60 VWNLVNLSDGVKPI*CKWIS 1
VW+LV+ DGVK I CK ++
Sbjct: 446 VWSLVDPPDGVKAIECKCVT 465
>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
italica]
Length = 1686
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = -2
Query: 210 RYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQVWNLVNLSDG 31
R + + E +ILLL+++EP TY AM PDS+KW AM+SE++SM +NQVWNLV+ DG
Sbjct: 187 RRSARLREMREILLLDNDEPVTYAEAMMDPDSDKWQSAMQSEIESMGDNQVWNLVDPPDG 246
Query: 30 VKPI*CKWI 4
VK I CKWI
Sbjct: 247 VKAIECKWI 255
>gb|EXB30189.1| hypothetical protein L484_000636 [Morus notabilis]
Length = 86
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = -2
Query: 246 PHRSGRVISLPERYNLLVTENNQILLLE--SNEPATYKAAMASPDSEKWLEAMKSEMDSM 73
P RSGRV LP+RY T QI+ + + +P+T+K AM D E+W AMK EM+SM
Sbjct: 3 PRRSGRVSRLPDRY----TGEAQIVTADDGNEDPSTFKDAMDDSDKEEWQAAMKLEMESM 58
Query: 72 SENQVWNLVNLSDGVKPI*CKWI 4
N VW LV+LS+GVKPI CKWI
Sbjct: 59 YSNSVWQLVDLSEGVKPIGCKWI 81
>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550176|gb|ABA92973.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 591
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = -2
Query: 186 NNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQVWNLVNLSDGVKPI*CKW 7
+ ILLL+++EP TY+ M PDSEKWL AMKSE++SM NQ+WNLV+ DGVK I CKW
Sbjct: 417 HRDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQIWNLVDPPDGVKAIECKW 476
Query: 6 I 4
+
Sbjct: 477 V 477
>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
Length = 746
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = -2
Query: 240 RSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSENQ 61
R R+ P RY LL T + ILLL+++EP TY+ M PDSEKWL AMKSE++SM NQ
Sbjct: 406 RFERIRRTPARYALLTTGQHDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQ 465
Query: 60 VWNLVNLSDGVKPI 19
VWNLV+ DG + I
Sbjct: 466 VWNLVDPPDGFRQI 479
>gb|EXB95627.1| hypothetical protein L484_003312 [Morus notabilis]
Length = 95
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = -2
Query: 246 PHRSGRVISLPERYNLLVTENNQILLLESN--EPATYKAAMASPDSEKWLEAMKSEMDSM 73
P RSGRV LP+RY TE QI+ + +P T+KA M D EKW AMK E++SM
Sbjct: 12 PRRSGRVSKLPDRY----TEETQIVTGDDGKEDPLTFKATMDDFDKEKWQAAMKLEIESM 67
Query: 72 SENQVWNLVNLSDGVKPI*CKWI 4
N VW L++L +G+KPI CKWI
Sbjct: 68 YSNLVWQLIDLPEGIKPIGCKWI 90
>gb|EXB94191.1| Serine/threonine-protein kinase ATM [Morus notabilis]
Length = 1438
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/82 (53%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = -2
Query: 243 HRSGRVISLPERYNLLVTENNQILLLESN--EPATYKAAMASPDSEKWLEAMKSEMDSMS 70
HRSGRV LP RY T QI+ ++ +P T+KAAM D EKW AMK E++SM
Sbjct: 1350 HRSGRVSKLPNRY----TGEAQIVTVDDGKEDPLTFKAAMDDFDKEKWQAAMKLEIESMY 1405
Query: 69 ENQVWNLVNLSDGVKPI*CKWI 4
N VW LV+L GVKPI CKWI
Sbjct: 1406 SNSVWQLVDLPKGVKPIGCKWI 1427
>gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii]
Length = 898
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = -2
Query: 246 PHRSGRVISLPERYNLLVTENNQILLLESNEPATYKAAMASPDSEKWLEAMKSEMDSMSE 67
P RS R+ S PE Y V E ++L++ +EP Y+ AM S DS KWLEAMKSEM SM E
Sbjct: 725 PRRSTRLRSAPEWYGNPVLE---VMLIDHDEPTNYEEAMVSLDSAKWLEAMKSEMGSMYE 781
Query: 66 NQVWNLVNLSDGVKPI*CKWI 4
N+VW LV+L DG + I KWI
Sbjct: 782 NKVWTLVDLPDGRQAIENKWI 802