BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00047397
         (669 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB74287.1| DNA-directed RNA polymerase subunit alpha, partia...   412   e-113
gb|AFB74291.1| DNA-directed RNA polymerase subunit alpha, partia...   408   e-112
gb|AFB74285.1| DNA-directed RNA polymerase subunit alpha, partia...   408   e-112
gb|AFB74293.1| DNA-directed RNA polymerase subunit alpha, partia...   405   e-111
gb|AFB74286.1| DNA-directed RNA polymerase subunit alpha, partia...   404   e-110
ref|YP_008999966.1| RNA polymerase alpha subunit (chloroplast) [...   403   e-110
ref|NP_054966.1| RNA polymerase alpha subunit [Spinacia oleracea...   402   e-110
gb|AFB74290.1| DNA-directed RNA polymerase subunit alpha, partia...   400   e-109
emb|CAA27214.1| unnamed protein product [Spinacia oleracea]           400   e-109
gb|AFB74294.1| DNA-directed RNA polymerase subunit alpha, partia...   400   e-109
ref|YP_009000128.1| RNA polymerase alpha subunit (chloroplast) [...   397   e-108
gb|AFB74288.1| DNA-directed RNA polymerase subunit alpha, partia...   397   e-108
gb|AFB74289.1| DNA-directed RNA polymerase subunit alpha, partia...   397   e-108
gb|AFB74295.1| DNA-directed RNA polymerase subunit alpha, partia...   397   e-108
gb|AFB74292.1| DNA-directed RNA polymerase subunit alpha, partia...   395   e-108
gb|ADM14340.1| RNA polymerase alpha subunit [Punica granatum]         395   e-108
gb|ADM92734.1| RNA polymerase alpha subunit protein [Davidia inv...   394   e-107
gb|ADM14339.1| RNA polymerase alpha subunit [Punica granatum]         392   e-107
gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta]    391   e-107
gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidops...   391   e-106

>gb|AFB74287.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Didierea madagascariensis]
          Length = 333

 Score =  412 bits (1060), Expect = e-113
 Identities = 202/222 (90%), Positives = 209/222 (94%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY+IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYRIKTPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K K K
Sbjct: 225 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKIK 266


>gb|AFB74291.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Portulacaria afra]
          Length = 333

 Score =  408 bits (1049), Expect = e-112
 Identities = 200/222 (90%), Positives = 208/222 (93%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGP+ VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY+IK PNN
Sbjct: 105 EASICVRGPKCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYRIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K K K
Sbjct: 225 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKIK 266


>gb|AFB74285.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Anredera baselloides]
          Length = 335

 Score =  408 bits (1048), Expect = e-112
 Identities = 199/222 (89%), Positives = 208/222 (93%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEI+LRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIILRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L +PID CIGLQLERNRGY+IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTDPIDLCIGLQLERNRGYRIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K K K
Sbjct: 225 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKIK 266


>gb|AFB74293.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Portulaca oleracea]
          Length = 339

 Score =  405 bits (1040), Expect = e-111
 Identities = 199/222 (89%), Positives = 206/222 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY  C
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGIC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY+IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYRIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFT HNRL E+ K K K
Sbjct: 225 LFIPFLHAEEENLHLEDNQHKVSLPLFTLHNRLTELSKNKIK 266


>gb|AFB74286.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Blossfeldia liliputana]
          Length = 329

 Score =  404 bits (1038), Expect = e-110
 Identities = 201/222 (90%), Positives = 208/222 (93%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY+IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYRIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSY  GNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSY--GNEKQEILFLEIWTNGSLTPKEALYEASRNLID 222

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEENFHLEDNQ+KVSLPLFTFHNRL E+ KKK K
Sbjct: 223 LFIPFLHAEEENFHLEDNQHKVSLPLFTFHNRLTELSKKKIK 264


>ref|YP_008999966.1| RNA polymerase alpha subunit (chloroplast) [Agrostemma githago]
           gi|555944053|gb|AGZ17957.1| RNA polymerase alpha subunit
           (chloroplast) [Agrostemma githago]
          Length = 341

 Score =  403 bits (1036), Expect = e-110
 Identities = 196/222 (88%), Positives = 207/222 (93%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGE+EGTCITRAK EKIPHEYST+VGIQESVH+IL NLKEI+LRSNLY TC
Sbjct: 45  IGIAMRRALLGEMEGTCITRAKSEKIPHEYSTLVGIQESVHDILMNLKEIILRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPIDFCIGLQLERNRGY IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDFCIGLQLERNRGYHIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           L IPFLHAEEENFHL DNQ KVSLPL TFH+RL ++RKKK K
Sbjct: 225 LLIPFLHAEEENFHLADNQPKVSLPLLTFHDRLTQLRKKKTK 266


>ref|NP_054966.1| RNA polymerase alpha subunit [Spinacia oleracea]
           gi|12644101|sp|P06505.2|RPOA_SPIOL RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|7636139|emb|CAB88759.1| RNA polymerase alpha subunit
           [Spinacia oleracea]
          Length = 335

 Score =  402 bits (1034), Expect = e-110
 Identities = 200/222 (90%), Positives = 208/222 (93%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTI+GIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTILGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY IK PNN
Sbjct: 105 EASICVRGPRGVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYHIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGS+PIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSFPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           L IPFLHA EEN +LEDNQ+KVSLPLFTFHNRLAEIRK KKK
Sbjct: 225 LLIPFLHA-EENVNLEDNQHKVSLPLFTFHNRLAEIRKNKKK 265


>gb|AFB74290.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Opuntia decumbens]
          Length = 323

 Score =  400 bits (1029), Expect = e-109
 Identities = 198/222 (89%), Positives = 206/222 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IG+A+RRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGVAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY+IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYRIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSY  GNE QEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSY--GNENQEILFLEIWTNGSLTPKEALYEASRNLID 222

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K K K
Sbjct: 223 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKIK 264


>emb|CAA27214.1| unnamed protein product [Spinacia oleracea]
          Length = 335

 Score =  400 bits (1029), Expect = e-109
 Identities = 199/222 (89%), Positives = 207/222 (93%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTI+GIQESVHEIL NLKEIVLRSNLY  C
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTILGIQESVHEILMNLKEIVLRSNLYGAC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY IK PNN
Sbjct: 105 EASICVRGPRGVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYHIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGS+PIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSFPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           L IPFLHA EEN +LEDNQ+KVSLPLFTFHNRLAEIRK KKK
Sbjct: 225 LLIPFLHA-EENVNLEDNQHKVSLPLFTFHNRLAEIRKNKKK 265


>gb|AFB74294.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Pereskia sacharosa]
          Length = 320

 Score =  400 bits (1027), Expect = e-109
 Identities = 199/222 (89%), Positives = 206/222 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY+IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYRIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSY  GNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSY--GNEKQEILFLEIWTNGSLTPKEALYEASRNLID 222

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K K K
Sbjct: 223 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKIK 264


>ref|YP_009000128.1| RNA polymerase alpha subunit (chloroplast) [Silene chalcedonica]
           gi|555944217|gb|AGZ18119.1| RNA polymerase alpha subunit
           (chloroplast) [Silene chalcedonica]
          Length = 326

 Score =  397 bits (1021), Expect = e-108
 Identities = 193/221 (87%), Positives = 205/221 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGE+EGTCITRAK EKIPHEYSTIVGIQESVH+IL NLKEI+LRSNLY  C
Sbjct: 45  IGIAMRRALLGEMEGTCITRAKSEKIPHEYSTIVGIQESVHDILMNLKEIILRSNLYGIC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY IKEPNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYHIKEPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLI+
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIN 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKK 664
           L IPFLHAEEEN HL DNQ KVSLPL TFH+RL ++RKKK+
Sbjct: 225 LLIPFLHAEEENLHLADNQQKVSLPLLTFHDRLTQLRKKKR 265


>gb|AFB74288.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Maihuenia poeppigii]
          Length = 331

 Score =  397 bits (1021), Expect = e-108
 Identities = 197/222 (88%), Positives = 205/222 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYST+VGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTVVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYHIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSY  GNEK+EILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSY--GNEKKEILFLEIWTNGSLTPKEALYEASRNLID 222

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K K K
Sbjct: 223 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKIK 264


>gb|AFB74289.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Mollugo verticillata]
          Length = 333

 Score =  397 bits (1020), Expect = e-108
 Identities = 196/222 (88%), Positives = 204/222 (91%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA I VRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY IK PNN
Sbjct: 105 EASISVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYHIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           L IPFLHAEEE  HL+DNQ+KVSLPLF FHNRL E+ + KKK
Sbjct: 225 LLIPFLHAEEETSHLDDNQHKVSLPLFYFHNRLIELSQNKKK 266


>gb|AFB74295.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Weingartia kargliana]
          Length = 329

 Score =  397 bits (1019), Expect = e-108
 Identities = 197/222 (88%), Positives = 205/222 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IG A+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGFAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY+IK  NN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYRIKAANN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSY  GNEKQEILFLEIWTNGSLTPKEALYEAS+NLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSY--GNEKQEILFLEIWTNGSLTPKEALYEASQNLID 222

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K KKK
Sbjct: 223 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKKK 264


>gb|AFB74292.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Pereskiopsis diguetii]
          Length = 325

 Score =  395 bits (1015), Expect = e-108
 Identities = 196/222 (88%), Positives = 204/222 (91%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IG+A+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGVAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           EA ICVRGPR VTAQD+ILPPYVEI+DNTQHIA+L EPID CIGLQLERNRGY IK PNN
Sbjct: 105 EASICVRGPRCVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYHIKAPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRNVNHSIHSY  G+E QEILFLEIWTNGSLTPKEALYEASRNLID
Sbjct: 165 FQDGSYPIDALFMPVRNVNHSIHSY--GSENQEILFLEIWTNGSLTPKEALYEASRNLID 222

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+KVSLPLFTFHNRL E+ K K K
Sbjct: 223 LFIPFLHAEEENLHLEDNQHKVSLPLFTFHNRLTELSKNKIK 264


>gb|ADM14340.1| RNA polymerase alpha subunit [Punica granatum]
          Length = 337

 Score =  395 bits (1015), Expect = e-108
 Identities = 193/221 (87%), Positives = 205/221 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
            A ICV+GP  VTAQD+ILPP VEIIDNTQHIA+LMEPI+ CIGLQ+ERNRGY IK PNN
Sbjct: 105 NASICVKGPGCVTAQDIILPPSVEIIDNTQHIASLMEPINLCIGLQIERNRGYHIKTPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+EASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKK 664
           L IPFLHAEEEN HLE+NQYKV+LPLFTFH+RL ++RK KK
Sbjct: 225 LLIPFLHAEEENLHLENNQYKVTLPLFTFHDRLTKLRKTKK 265


>gb|ADM92734.1| RNA polymerase alpha subunit protein [Davidia involucrata]
          Length = 328

 Score =  394 bits (1012), Expect = e-107
 Identities = 189/222 (85%), Positives = 207/222 (93%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAKFE+IPHEYSTIVG QESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKFERIPHEYSTIVGTQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           +A ICV+GP +VTAQD+I PPYVEI+D+TQ+IA+L EPID CIGLQ+ERNRGY+IK PNN
Sbjct: 105 DASICVKGPGYVTAQDIISPPYVEIVDSTQYIASLTEPIDLCIGLQIERNRGYRIKMPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+EASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLH EEEN HLEDNQ+KV+LPLFTFH +LA++RK KKK
Sbjct: 225 LFIPFLHTEEENLHLEDNQHKVTLPLFTFHEKLAKLRKNKKK 266


>gb|ADM14339.1| RNA polymerase alpha subunit [Punica granatum]
          Length = 337

 Score =  392 bits (1008), Expect = e-107
 Identities = 192/222 (86%), Positives = 205/222 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEIL NLKEIVLRS LY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSYLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
            A ICV+GP  VTAQD+ILPP VEIIDNTQHIA+LMEPI+ CIGLQ+ERNRGY IK PNN
Sbjct: 105 NASICVKGPGCVTAQDIILPPSVEIIDNTQHIASLMEPINLCIGLQIERNRGYHIKTPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+EASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           L IPFLHAEEEN HLE+NQYKV+LPLFTFH+RL ++RK KK+
Sbjct: 225 LLIPFLHAEEENLHLENNQYKVTLPLFTFHDRLTKLRKTKKE 266


>gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta]
          Length = 337

 Score =  391 bits (1005), Expect = e-107
 Identities = 189/222 (85%), Positives = 203/222 (91%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           +A ICVRGP +VT QD+ILPPYVEI+DNTQHIA+L EPID CIGLQ+ERNRGY IK PNN
Sbjct: 105 DASICVRGPGYVTTQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLIKTPNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRN NHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYRNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLH EEEN HLEDNQ+ + LP F FH++LA++RK KKK
Sbjct: 225 LFIPFLHMEEENLHLEDNQHTIPLPPFNFHDKLAKLRKNKKK 266


>gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidopsis corallina]
          Length = 337

 Score =  391 bits (1004), Expect = e-106
 Identities = 190/222 (85%), Positives = 205/222 (92%)
 Frame = +2

Query: 2   IGIAIRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILTNLKEIVLRSNLYATC 181
           IGIA+RRALLGEIEGTCITRAK EKIPHEYSTIVGIQESVHEIL NLKEIVLRSNLY TC
Sbjct: 45  IGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTC 104

Query: 182 EAYICVRGPRHVTAQDLILPPYVEIIDNTQHIATLMEPIDFCIGLQLERNRGYQIKEPNN 361
           +A ICVRGP +VTAQD+I PP VEI+DNTQHIA+L EPID CIGLQ+ERNRGY+IK  NN
Sbjct: 105 DASICVRGPGYVTAQDIISPPSVEIVDNTQHIASLTEPIDLCIGLQIERNRGYRIKTLNN 164

Query: 362 FQDGSYPIDARFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID 541
           FQDGSYPIDA FMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+EASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 542 LFIPFLHAEEENFHLEDNQYKVSLPLFTFHNRLAEIRKKKKK 667
           LFIPFLHAEEEN HLEDNQ+K + PLFTFH+RLA++RK KK+
Sbjct: 225 LFIPFLHAEEENLHLEDNQHKATFPLFTFHDRLAKLRKNKKE 266