BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00047337
         (262 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]          86   7e-15
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    83   4e-14
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      83   4e-14
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    82   1e-13
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...    82   1e-13
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]      82   1e-13
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    79   8e-13
gb|AAD17357.1| contains similarity to retrovirus-related polypro...    77   2e-12
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      77   2e-12
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...    72   8e-11
ref|XP_006369910.1| hypothetical protein POPTR_0001s34915g [Popu...    67   3e-09
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    65   1e-08
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]    57   3e-06

>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 38/75 (50%), Positives = 57/75 (76%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC ++QGL+RSR + +GE+D+RVG+  RV  ++VG  +L+LPSGLV++L+NCY +P+L  
Sbjct: 271 ICKSLQGLKRSRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGLVLELNNCYCIPALCK 330

Query: 81  NIISVSKLVK*GFSF 37
           N+IS S L   G+ F
Sbjct: 331 NVISASCLQAEGYGF 345


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/75 (49%), Positives = 55/75 (73%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC ++QGL+RSR + +G +D+RVG+  RV  ++VG   L+LPSGLV++L+NCY +P+L  
Sbjct: 404 ICKSLQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCK 463

Query: 81  NIISVSKLVK*GFSF 37
           N+IS S L   G+ F
Sbjct: 464 NVISASCLQAEGYGF 478


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/75 (49%), Positives = 55/75 (73%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC ++QGL+RSR + +G +D+RVG+  RV  ++VG   L+LPSGLV++L+NCY +P+L  
Sbjct: 404 ICKSLQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCK 463

Query: 81  NIISVSKLVK*GFSF 37
           N+IS S L   G+ F
Sbjct: 464 NVISASCLQAEGYGF 478


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/77 (49%), Positives = 56/77 (72%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC+++Q L ++RR+ +GE+DLRVG+  +V ALS     L LPSG +++L+NCY VP++S 
Sbjct: 400 ICNSMQSLTKNRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSR 459

Query: 81  NIISVSKLVK*GFSFFI 31
           NIIS S L+  G+ F I
Sbjct: 460 NIISASCLMTEGYKFII 476


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/75 (49%), Positives = 56/75 (74%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC ++QGL+RSR + +GE+D+RVG+  RV A++VG   L+LPSG+V++L+NCY + +L  
Sbjct: 364 ICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCK 423

Query: 81  NIISVSKLVK*GFSF 37
           N+IS S L   G+ F
Sbjct: 424 NVISASCLQAEGYGF 438


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/75 (49%), Positives = 56/75 (74%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC ++QGL+RSR + +GE+D+RVG+  RV A++VG   L+LPSG+V++L+NCY + +L  
Sbjct: 291 ICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCK 350

Query: 81  NIISVSKLVK*GFSF 37
           N+IS S L   G+ F
Sbjct: 351 NVISASCLQAEGYGF 365


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/75 (49%), Positives = 55/75 (73%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC ++QGL+RSR + +GE+D+RVG+  RV A++VG   L+LPS LV++L+N Y +P+L  
Sbjct: 288 ICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLELNNYYCIPALCK 347

Query: 81  NIISVSKLVK*GFSF 37
           N+IS S L   G+ F
Sbjct: 348 NVISASCLQAEGYGF 362


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           IC N+ G+  S  M +G++DLR+ +  RV  L VG Y+L+ PSG+V++L NCY V +++ 
Sbjct: 69  ICVNMHGINNSITMEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINK 128

Query: 81  NIISVSKLVK*GFSFFI**QCLCVF 7
           NIISVS L   GF F I  +C C F
Sbjct: 129 NIISVSCLDMEGFHFLIKNKC-CSF 152


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/74 (48%), Positives = 53/74 (71%)
 Frame = -2

Query: 258 CSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLSTN 79
           C ++QG++RSR + +GE++LRVG+   V  ++VG   L LPSGLV++L+NCY VP+L  N
Sbjct: 313 CKSLQGMRRSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQN 372

Query: 78  IISVSKLVK*GFSF 37
           +IS S L   G+ F
Sbjct: 373 VISASCLQAEGYDF 386


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = -2

Query: 255 SNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLSTNI 76
           S  +GL+RSR + +GE+D+ VG+   V A++VG   L+LPSGLV++L+NCY + +L  N+
Sbjct: 199 SKTKGLKRSRNLARGEVDIHVGNGASVVAVAVGTMPLSLPSGLVLELNNCYCILALCKNV 258

Query: 75  ISVSKLVK*GFSF 37
           IS S L   G+ F
Sbjct: 259 ISASCLQAEGYGF 271


>ref|XP_006369910.1| hypothetical protein POPTR_0001s34915g [Populus trichocarpa]
           gi|550348894|gb|ERP66479.1| hypothetical protein
           POPTR_0001s34915g [Populus trichocarpa]
          Length = 120

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -2

Query: 240 LQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLSTNIISVSK 61
           L +SRR+ KGE+DL VG+ T+   L+V  Y LT   G++++L NCY V  LS NI+SVS 
Sbjct: 6   LTKSRRLCKGEVDLYVGNGTKAVTLTVETYYLTFQIGIILELDNCYFVSILSRNIVSVSF 65

Query: 60  LVK*GFSFFI**QCLCVF 7
           L   G  F +  +C C F
Sbjct: 66  LALNGLKFIMNGKC-CSF 82


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 49/74 (66%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           +C+++QG Q +R+++KGE+++ +GD T V  L+VG   L   +  ++ L N   VPS+  
Sbjct: 271 VCNSLQGFQETRQLSKGEVNIFLGDGTEVAVLAVGNIALNFKNNRILSLKNVLYVPSIRR 330

Query: 81  NIISVSKLVK*GFS 40
           N+ISVS L K G+S
Sbjct: 331 NLISVSSLSKNGYS 344


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/74 (35%), Positives = 47/74 (63%)
 Frame = -2

Query: 261 ICSNVQGLQRSRRMTKGEIDLRVGDDTRVPALSVGVYNLTLPSGLVIDLHNCYNVPSLST 82
           +C+++QG Q +R+++KGE+++ +G+ + V  L+VG   L   +   + L N   VPS+  
Sbjct: 623 VCNSLQGFQETRQLSKGEVNIFLGNGSEVAVLAVGNIALNFKNNRTLFLKNVLYVPSIRR 682

Query: 81  NIISVSKLVK*GFS 40
           N+I +S L K G+S
Sbjct: 683 NLIPISSLSKNGYS 696