BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00047193
         (1104 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531063.1| pentatricopeptide repeat-containing protein,...   372   e-100
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   369   2e-99
ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containi...   363   9e-98
ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Popu...   360   7e-97
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   355   1e-95
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   355   1e-95
gb|EOY00910.1| Pentatricopeptide repeat-containing protein, puta...   353   7e-95
ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containi...   353   9e-95
ref|XP_006448295.1| hypothetical protein CICLE_v10014876mg [Citr...   353   9e-95
gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsu...   348   2e-93
gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]     343   7e-92
ref|NP_177262.1| pentatricopeptide repeat-containing protein [Ar...   336   9e-90
ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containi...   336   1e-89
ref|XP_006390810.1| hypothetical protein EUTSA_v10018364mg [Eutr...   333   6e-89
ref|XP_002888819.1| pentatricopeptide repeat-containing protein ...   333   6e-89
ref|XP_006605955.1| PREDICTED: pentatricopeptide repeat-containi...   326   9e-87
ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Caps...   326   9e-87
ref|XP_003592540.1| Pentatricopeptide repeat-containing protein ...   323   1e-85
ref|XP_004238857.1| PREDICTED: pentatricopeptide repeat-containi...   320   5e-85
gb|ESW15022.1| hypothetical protein PHAVU_007G037500g [Phaseolus...   318   2e-84

>ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529358|gb|EEF31324.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  372 bits (956), Expect = e-100
 Identities = 199/342 (58%), Positives = 230/342 (67%)
 Frame = +1

Query: 79   SSQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEKICKLLSTTPKXXXXXXXXX 258
            S  L +  SIH  L          E N    T + I D+  IC+LLS  P          
Sbjct: 57   SPHLNFQRSIHADL----------EQNPEIFTDKIIEDTRNICRLLSKNPNSSIEKLLLG 106

Query: 259  XXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQFK 438
                 ++SP LVLEVLK+LSNAG LA+ FF+WAEKQKGF Y TESYNALIDSLGKIKQF 
Sbjct: 107  ASF--KVSPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFN 164

Query: 439  MIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFLD 618
            MIW LV+ MK KG+LTK TF L                TFE+M+KFGL  E +D NR LD
Sbjct: 165  MIWNLVNDMKRKGVLTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLD 224

Query: 619  TLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFEP 798
            TL KSRQV +AQ V              SYTILLEGWGQ++NLLKLDEVYREMKDEGFEP
Sbjct: 225  TLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEP 284

Query: 799  DVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILINGLGSDKKLSEALKFF 978
            DVV YGIL+NAYCK RK   A+ELF EME+K  +PS HIFC LINGLGS ++LSEAL+FF
Sbjct: 285  DVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFF 344

Query: 979  EMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
              SKA+G  PE PTYNA+VG+YCWSMR DDA+++VDEM + G
Sbjct: 345  RRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSG 386



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 2/249 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +GFE    +Y  LI++  K++++     L   M+ K    + + F             
Sbjct: 278  KDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRL 337

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  F R K  G   E    N  +   C S ++  A ++              +Y I+
Sbjct: 338  SEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDII 397

Query: 718  LEGWGQQQNLLKLDEVYREMK-DEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + +   +   V+ +M  +E  EP V  Y I++  +C   K   A++++  M+ KG
Sbjct: 398  LHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKG 457

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAF 1074
            V P  H+F ILIN L  + KL  A K+F+     G+ P A  ++ +  +     R D   
Sbjct: 458  VHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVV 517

Query: 1075 QIVDEMNRL 1101
             +  ++++L
Sbjct: 518  LLAQKIDKL 526


>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial [Vitis vinifera]
          Length = 531

 Score =  369 bits (946), Expect = 2e-99
 Identities = 190/341 (55%), Positives = 235/341 (68%)
 Frame = +1

Query: 82   SQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEKICKLLSTTPKXXXXXXXXXX 261
            S   +C SIHG  ++         + +  + H   +D+ K+CKLL T             
Sbjct: 50   SPFSFCRSIHGGSIRNQACT----ETTDATNHHIAQDTGKLCKLLCTHSNSSIESLLNGA 105

Query: 262  XGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQFKM 441
                ++SP LVLEVLKKLSN+GV+A+ FFRWAEKQKGF+Y+TE+YNALI++LGKIKQFKM
Sbjct: 106  S--VDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKM 163

Query: 442  IWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFLDT 621
            IW LV+ M+ KGLLT+ TF L                TFE+M+KFGL   LSD NR LD 
Sbjct: 164  IWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDA 223

Query: 622  LCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFEPD 801
            LCKSR V+ AQ+V              SYTILLEGWGQ+QNLL+LDEVYREMKDEGFEPD
Sbjct: 224  LCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPD 283

Query: 802  VVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILINGLGSDKKLSEALKFFE 981
             V YGIL+NA+CK+R+   AVELF +ME     P+ HI+C LINGLGS+++L+EAL+FFE
Sbjct: 284  AVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFE 343

Query: 982  MSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
             SKA+G  PEAPTYNA+VGSYC SMR DDA++IVDEM + G
Sbjct: 344  RSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCG 384



 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKI-KGLLTKYTFNLXXXXXXXXXXX 537
            K +GFE    +Y  LI++  K +++     L   M+  K + T + +             
Sbjct: 276  KDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRL 335

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FER K  G T E    N  + + C+S ++  A ++              +Y I+
Sbjct: 336  TEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDII 395

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + +   +   V++ M  E G EP V  Y I++  +C   +   A+ ++ EM+ KG
Sbjct: 396  LHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKG 455

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYN 1026
            V P  H+F  LIN L  + KL EA K+F      G+ P A  ++
Sbjct: 456  VLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFS 499



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 52/282 (18%), Positives = 105/282 (37%), Gaps = 37/282 (13%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKY-TFNLXXXXXXXXXXXXXX 546
            G +     +N L+D+L K +  +    + D MK +       ++ +              
Sbjct: 209  GLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRL 268

Query: 547  XXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEG 726
               +  MK  G   +       ++  CK+R+   A ++               Y  L+ G
Sbjct: 269  DEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLING 328

Query: 727  WGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGV--- 897
             G ++ L +  + +   K  GF P+   Y  ++ +YC+S +   A  +  EM   GV   
Sbjct: 329  LGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQ 388

Query: 898  ---------------------------------EPSQHIFCILINGLGSDKKLSEALKFF 978
                                             EPS   + I++    +++++  AL+ +
Sbjct: 389  TRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVW 448

Query: 979  EMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            +  KA GV+P    ++ ++ S C+  + D+A +   EM  +G
Sbjct: 449  DEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMG 490


>ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score =  363 bits (931), Expect = 9e-98
 Identities = 194/368 (52%), Positives = 244/368 (66%)
 Frame = +1

Query: 1    PLKIPNFTSLFSPNNLPLNQIYLGASSSQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQ 180
            P + P F    S   LP N          L +  +IHG+L KT V++         +TH 
Sbjct: 13   PSQNPFFRFSNSQTRLPTNL------DPSLSFYRTIHGTLYKTQVLD-------EANTHH 59

Query: 181  AIRDSEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAE 360
               ++EKI K+LST P               ++SP LV+EVLKKL+NAG LA+ FFRWA+
Sbjct: 60   ITFEAEKISKILST-PNSNSPIDSLLAGASVKVSPTLVVEVLKKLNNAGALALSFFRWAQ 118

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXX 540
            KQKGF++ TESYNALI++LGKIKQFK+IW LV+ M  +GLL+K TF L            
Sbjct: 119  KQKGFKHCTESYNALIEALGKIKQFKIIWDLVNEMNNEGLLSKDTFALISRRYARARRVS 178

Query: 541  XXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILL 720
                 FE+M+KFG+  E SD NR +DTL KSRQV+ AQ+V              SYTILL
Sbjct: 179  DAIKAFEKMEKFGIKLEGSDFNRLIDTLSKSRQVEKAQEVFDEMKQRRFKPDIKSYTILL 238

Query: 721  EGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVE 900
            EGWGQQQN L+LDEVYREMK EGF+PDVV YGIL+NA+CK++K  + + LF EME K V 
Sbjct: 239  EGWGQQQNFLRLDEVYREMKAEGFDPDVVTYGILINAHCKAKKYNEVIGLFREMEAKNVR 298

Query: 901  PSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQI 1080
            PS HIFC+LINGLGS+K+L+EAL+FFE  KA+G+  EAPTYNA+VG+YCWSMR  DAF++
Sbjct: 299  PSPHIFCMLINGLGSEKRLAEALEFFERFKASGLEAEAPTYNAVVGAYCWSMRMSDAFRV 358

Query: 1081 VDEMNRLG 1104
            VDEM + G
Sbjct: 359  VDEMRKCG 366



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 2/224 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +GF+    +Y  LI++  K K++  +  L   M+ K +  + + F +           
Sbjct: 258  KAEGFDPDVVTYGILINAHCKAKKYNEVIGLFREMEAKNVRPSPHIFCMLINGLGSEKRL 317

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FER K  GL  E    N  +   C S ++  A +V              +Y I+
Sbjct: 318  AEALEFFERFKASGLEAEAPTYNAVVGAYCWSMRMSDAFRVVDEMRKCGIGPNSRTYDII 377

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + +   +   V++ +  E G EP V  Y IL+  +C   +   A++++ +M+ KG
Sbjct: 378  LHHLVKHRRTEQAYSVFQRISREPGCEPTVSTYEILVRMFCNENRVDMALQVWDQMKTKG 437

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYN 1026
            V P  H+F  LIN L  + KL EA ++F+     G+ P    ++
Sbjct: 438  VLPRMHMFSTLINTLCHENKLDEACRYFQDMLDMGIRPPTQLFS 481


>ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Populus trichocarpa]
            gi|550329653|gb|EEF02066.2| hypothetical protein
            POPTR_0010s12490g [Populus trichocarpa]
          Length = 488

 Score =  360 bits (923), Expect = 7e-97
 Identities = 188/334 (56%), Positives = 225/334 (67%)
 Frame = +1

Query: 103  SIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEKICKLLSTTPKXXXXXXXXXXXGVEEIS 282
            S H  L +T V+  +          + + D+E ICKLLS  P               E+S
Sbjct: 11   STHTDLQQTVVLTDASNQTPQVLADKIVEDAENICKLLSKNPNSSVEALLNKAS--MEVS 68

Query: 283  PLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDS 462
            P LV E LKKLSNAG LA+ FFRWAEKQKGF+Y+TESY+ALI+SLGKIKQF +IW LV  
Sbjct: 69   PSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTD 128

Query: 463  MKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQV 642
            MK KGLL K TF L                 F +M+KFGL  E SD+NR LDTLCKSRQV
Sbjct: 129  MKQKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQV 188

Query: 643  KTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGIL 822
            + AQ V              SYTILLEGWGQ++NL +L EVY EMKDEGFEPDVV YGIL
Sbjct: 189  ERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGIL 248

Query: 823  MNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGV 1002
            +NA+CKSR+   A+ELF EME K  +PS HI+C LINGLG++K+LSEAL+FFE+SKA+G 
Sbjct: 249  INAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGF 308

Query: 1003 VPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            VPEAPTYNA+VG+YCWS R DD  + +DEM + G
Sbjct: 309  VPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGG 342



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 1/246 (0%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKY-TFNLXXXXXXXXXXXXXX 546
            G +  +   N L+D+L K +Q +   ++ D M  +G +    ++ +              
Sbjct: 167  GLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRL 226

Query: 547  XXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEG 726
               +  MK  G   ++      ++  CKSR+   A ++               Y  L+ G
Sbjct: 227  MEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLING 286

Query: 727  WGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPS 906
             G ++ L +  E +   K  GF P+   Y  ++ AYC S +         EM   GV PS
Sbjct: 287  LGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPS 346

Query: 907  QHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVD 1086
               + I+++ L    K   A   F+     G  P   TY  +V  +C   R D A ++ D
Sbjct: 347  ARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCEPSVSTYEIIVRMFCNEDRVDMAIKVWD 406

Query: 1087 EMNRLG 1104
            +M   G
Sbjct: 407  QMKAKG 412



 Score = 71.2 bits (173), Expect = 7e-10
 Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 1/223 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +GFE    +Y  LI++  K +++     L   M+ K    + + +             
Sbjct: 234  KDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRL 293

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FE  K  G   E    N  +   C S ++   Q+               +Y I+
Sbjct: 294  SEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDII 353

Query: 718  LEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGV 897
            L    +         V+++M  EG EP V  Y I++  +C   +   A++++ +M+ KG+
Sbjct: 354  LHHLIRAGKTKIAYSVFQKMSCEGCEPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGI 413

Query: 898  EPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYN 1026
             P  H+F  LIN L  + KL EA  +F+     G+ P A  ++
Sbjct: 414  LPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFS 456


>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  355 bits (912), Expect = 1e-95
 Identities = 182/330 (55%), Positives = 228/330 (69%), Gaps = 5/330 (1%)
 Frame = +1

Query: 130  HVIEISEED-----NSSKSTHQAIRDSEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLV 294
            H IE S++D      S   + +  +D+EK CKL+S  P               E+SP L+
Sbjct: 68   HRIEHSKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESLLDGAP--MELSPALI 125

Query: 295  LEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIK 474
            +EVLKKLSNAG LA+ FFRWAEKQKGF++TTESYN LI++LGKIKQF +IW LV  MK K
Sbjct: 126  VEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRK 185

Query: 475  GLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQ 654
            G+L++ TF L                +FE+M+KFG    +SD NR LDTLCKSR VK AQ
Sbjct: 186  GILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQ 245

Query: 655  QVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAY 834
            +V              SYTILLEGWGQ QNLLKL+EVYREM+DEGFEPDVV +GIL+NA+
Sbjct: 246  EVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAH 305

Query: 835  CKSRKPTKAVELFSEMENKGVEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEA 1014
            CK+RK  +A+ LF EME K ++PS H+FC LINGLGS+K+L EAL+FFE  K +G  PEA
Sbjct: 306  CKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEA 365

Query: 1015 PTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            PTYNA+VG+YCWSM+   A+++VDEM + G
Sbjct: 366  PTYNAVVGAYCWSMKMAYAYRMVDEMRKSG 395



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 2/249 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            + +GFE    ++  LI++  K +++     L   M+ K +  + + F             
Sbjct: 287  RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FE++K  G   E    N  +   C S ++  A ++              +Y I+
Sbjct: 347  KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDII 406

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + +   +   V++ M  E G EP +  Y I++  +C   +   A++++ EM+ KG
Sbjct: 407  LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKG 466

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAF 1074
            V P  H+F  LIN L  + KL +A  +F+     G+ P A  ++ +  +     R D A 
Sbjct: 467  VLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTAL 526

Query: 1075 QIVDEMNRL 1101
             + +++ +L
Sbjct: 527  LMAEKIXKL 535



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 60/284 (21%), Positives = 104/284 (36%), Gaps = 39/284 (13%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMK---IKGLLTKYTFNLXXXXXXXXXXXX 540
            GF+     +N L+D+L K +  K    + D MK    K  +  YT  L            
Sbjct: 220  GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKL 279

Query: 541  XXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILL 720
                 +  M+  G   ++      ++  CK+R+   A ++               +  L+
Sbjct: 280  NE--VYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLI 337

Query: 721  EGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVE 900
             G G ++ L +  E + ++K  GF P+   Y  ++ AYC S K   A  +  EM   GV 
Sbjct: 338  NGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVG 397

Query: 901  PSQHIFCILINGLGSDKKLSEALKFFEMS------------------------------- 987
            P+   + I+++ L   +K  EA   F+                                 
Sbjct: 398  PNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQ 457

Query: 988  -----KANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
                 KA GV+P    ++ ++ S C   + +DA     EM  +G
Sbjct: 458  IWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVG 501


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  355 bits (912), Expect = 1e-95
 Identities = 182/330 (55%), Positives = 228/330 (69%), Gaps = 5/330 (1%)
 Frame = +1

Query: 130  HVIEISEED-----NSSKSTHQAIRDSEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLV 294
            H IE S++D      S   + +  +D+EK CKL+S  P               E+SP L+
Sbjct: 68   HRIEHSKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESLLDGAP--MELSPALI 125

Query: 295  LEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIK 474
            +EVLKKLSNAG LA+ FFRWAEKQKGF++TTESYN LI++LGKIKQF +IW LV  MK K
Sbjct: 126  VEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRK 185

Query: 475  GLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQ 654
            G+L++ TF L                +FE+M+KFG    +SD NR LDTLCKSR VK AQ
Sbjct: 186  GILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQ 245

Query: 655  QVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAY 834
            +V              SYTILLEGWGQ QNLLKL+EVYREM+DEGFEPDVV +GIL+NA+
Sbjct: 246  EVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAH 305

Query: 835  CKSRKPTKAVELFSEMENKGVEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEA 1014
            CK+RK  +A+ LF EME K ++PS H+FC LINGLGS+K+L EAL+FFE  K +G  PEA
Sbjct: 306  CKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEA 365

Query: 1015 PTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            PTYNA+VG+YCWSM+   A+++VDEM + G
Sbjct: 366  PTYNAVVGAYCWSMKMAYAYRMVDEMRKSG 395



 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 2/249 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            + +GFE    ++  LI++  K +++     L   M+ K +  + + F             
Sbjct: 287  RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FE++K  G   E    N  +   C S ++  A ++              +Y I+
Sbjct: 347  KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDII 406

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + +   +   V++ M  E G EP +  Y I++  +C   +   A++++ EM+ KG
Sbjct: 407  LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKG 466

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAF 1074
            V P  H+F  LIN L  + KL +A  +F+     G+ P A  ++ +  +     R D A 
Sbjct: 467  VLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTAL 526

Query: 1075 QIVDEMNRL 1101
             + +++ +L
Sbjct: 527  LMAEKIKKL 535



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 60/284 (21%), Positives = 104/284 (36%), Gaps = 39/284 (13%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMK---IKGLLTKYTFNLXXXXXXXXXXXX 540
            GF+     +N L+D+L K +  K    + D MK    K  +  YT  L            
Sbjct: 220  GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKL 279

Query: 541  XXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILL 720
                 +  M+  G   ++      ++  CK+R+   A ++               +  L+
Sbjct: 280  NE--VYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLI 337

Query: 721  EGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVE 900
             G G ++ L +  E + ++K  GF P+   Y  ++ AYC S K   A  +  EM   GV 
Sbjct: 338  NGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVG 397

Query: 901  PSQHIFCILINGLGSDKKLSEALKFFEMS------------------------------- 987
            P+   + I+++ L   +K  EA   F+                                 
Sbjct: 398  PNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQ 457

Query: 988  -----KANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
                 KA GV+P    ++ ++ S C   + +DA     EM  +G
Sbjct: 458  IWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVG 501


>gb|EOY00910.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao] gi|508709014|gb|EOY00911.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 1 [Theobroma cacao]
          Length = 545

 Score =  353 bits (906), Expect = 7e-95
 Identities = 190/358 (53%), Positives = 239/358 (66%), Gaps = 2/358 (0%)
 Frame = +1

Query: 31   FSPNNLPLNQIYLGASSS-QLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIR-DSEKI 204
            F+ N+LP ++   G  S+  L+   SIH  LM     ++  E    K     +  D+ KI
Sbjct: 41   FNLNSLPDHKDSFGYPSNLHLMIYRSIHEDLMPK---KLPFEPYEKKPAEPKLEEDAAKI 97

Query: 205  CKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYT 384
            CKLLS+  +              E+SP LV EVLK+LSNAGV+A+ FF WAEKQKGF+Y 
Sbjct: 98   CKLLSS--RSDIHVDKLLENASIEVSPSLVAEVLKRLSNAGVIAMSFFTWAEKQKGFKYN 155

Query: 385  TESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFER 564
            TESYNALI++LGKIKQFK+IW L++ MK   LL+K TF L                 FER
Sbjct: 156  TESYNALIEALGKIKQFKLIWNLLNDMKSSKLLSKDTFALISRRYARARKVEEAIEAFER 215

Query: 565  MKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQN 744
            M++FG   + SD NR +DTL KSR V+ A +V              SYTILLEGWG++ N
Sbjct: 216  MEEFGFKLDTSDFNRLIDTLSKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHN 275

Query: 745  LLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCI 924
            LL+LDEVYREMKDEGFEPDVV YGIL+NAYCK++K  +AVELF EME K  +PS H+FC 
Sbjct: 276  LLRLDEVYREMKDEGFEPDVVTYGILINAYCKAKKYNRAVELFHEMEAKNCKPSPHVFCT 335

Query: 925  LINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNR 1098
            LINGLGS+K+LSEAL+FFE SK+ G  PEAPTYN++VG+YCWSM+ DDAF+++ EM R
Sbjct: 336  LINGLGSEKRLSEALEFFERSKSCGFAPEAPTYNSLVGAYCWSMQMDDAFRVIGEMRR 393



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 2/249 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +GFE    +Y  LI++  K K++     L   M+ K    + + F             
Sbjct: 287  KDEGFEPDVVTYGILINAYCKAKKYNRAVELFHEMEAKNCKPSPHVFCTLINGLGSEKRL 346

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FER K  G   E    N  +   C S Q+  A +V              +Y I+
Sbjct: 347  SEALEFFERSKSCGFAPEAPTYNSLVGAYCWSMQMDDAFRVIGEMRRNLVGPNSRTYDII 406

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + + + +   V+++M  E G  P V  Y I++  +C   +   A+ ++++M+ +G
Sbjct: 407  LHHLIKARRMKEAYLVFQKMTSEPGCVPTVSTYEIIVRMFCNEEQVDMAMLVWAQMKAEG 466

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAF 1074
            V P  H+F  LIN L  + KL +A K+F+     G+ P A  ++ +  +     + D A 
Sbjct: 467  VLPGMHMFSDLINSLCHNSKLDDACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKKDTAL 526

Query: 1075 QIVDEMNRL 1101
             +  ++++L
Sbjct: 527  NLARKIDKL 535


>ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Citrus sinensis]
          Length = 537

 Score =  353 bits (905), Expect = 9e-95
 Identities = 188/356 (52%), Positives = 239/356 (67%), Gaps = 1/356 (0%)
 Frame = +1

Query: 40   NNLPLNQIYLGASSSQLLYCSSIHGSLMKTHV-IEISEEDNSSKSTHQAIRDSEKICKLL 216
            N+ P ++I   +  + L    S+H +  +T V I+I ++D  +          E+ICK++
Sbjct: 42   NSTPSSKISPWSLRNHLNSYRSVHVTSDETQVSIDIEKKDPPNAQI-------ERICKIV 94

Query: 217  STTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESY 396
             T                 E+SP LVLEVLK+LSNAGVLA+ FFRWAEKQKGF+Y+TESY
Sbjct: 95   LTNTANVESSLDVASI---EVSPTLVLEVLKRLSNAGVLALSFFRWAEKQKGFKYSTESY 151

Query: 397  NALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKF 576
            NALI+SLGK+KQFK+IW LV  MK K LLT  TF L                 FE+M KF
Sbjct: 152  NALIESLGKVKQFKLIWDLVSEMKRKRLLTNDTFALISRRYARARRVNEAIDAFEKMDKF 211

Query: 577  GLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKL 756
            GL  EL D NR +DTLCKSR V+ AQ+V              SYTILLEGWGQQ+NLL +
Sbjct: 212  GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 271

Query: 757  DEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILING 936
            +EVYREMKD+GFEPDVV+YGI++NA+C +++  +AVELF EME    +PS HIFC LING
Sbjct: 272  NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 331

Query: 937  LGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            LGS+K+LSEAL+FF  SK  G  PEAPTYNA+VG+YCWSMR +DA++++DEM + G
Sbjct: 332  LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 387



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K  GFE    SY  +I++    K++     L   M+      + + F             
Sbjct: 279  KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 338

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  F + KK G   E    N  +   C S ++  A ++              +Y I+
Sbjct: 339  SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNSRTYDIV 398

Query: 718  LEGWGQQQNLLKLDEVYREM-KDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    +     +   V++ M +  G EP V  Y I++  +C + +   A+ ++ EM+ +G
Sbjct: 399  LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 458

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYN 1026
            V P  H++  LIN L  + KL +A K+F+     G+ P    ++
Sbjct: 459  VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 502


>ref|XP_006448295.1| hypothetical protein CICLE_v10014876mg [Citrus clementina]
            gi|557550906|gb|ESR61535.1| hypothetical protein
            CICLE_v10014876mg [Citrus clementina]
          Length = 531

 Score =  353 bits (905), Expect = 9e-95
 Identities = 188/356 (52%), Positives = 239/356 (67%), Gaps = 1/356 (0%)
 Frame = +1

Query: 40   NNLPLNQIYLGASSSQLLYCSSIHGSLMKTHV-IEISEEDNSSKSTHQAIRDSEKICKLL 216
            N+ P ++I   +  + L    S+H +  +T V I+I ++D  +          E+ICK++
Sbjct: 42   NSTPSSKISPWSLRNHLNSYRSVHVTSDETQVSIDIEKKDPPNAQI-------ERICKIV 94

Query: 217  STTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESY 396
             T                 E+SP LVLEVLK+LSNAGVLA+ FFRWAEKQKGF+Y+TESY
Sbjct: 95   LTNTANVESSLDVASI---EVSPTLVLEVLKRLSNAGVLALSFFRWAEKQKGFKYSTESY 151

Query: 397  NALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKF 576
            NALI+SLGK+KQFK+IW LV  MK K LLT  TF L                 FE+M KF
Sbjct: 152  NALIESLGKVKQFKLIWDLVSEMKRKRLLTNDTFALISRRYARARRVNEAIDAFEKMDKF 211

Query: 577  GLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKL 756
            GL  EL D NR +DTLCKSR V+ AQ+V              SYTILLEGWGQQ+NLL +
Sbjct: 212  GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 271

Query: 757  DEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILING 936
            +EVYREMKD+GFEPDVV+YGI++NA+C +++  +AVELF EME    +PS HIFC LING
Sbjct: 272  NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 331

Query: 937  LGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            LGS+K+LSEAL+FF  SK  G  PEAPTYNA+VG+YCWSMR +DA++++DEM + G
Sbjct: 332  LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 387



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K  GFE    SY  +I++    K++     L   M+      + + F             
Sbjct: 279  KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 338

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  F + KK G   E    N  +   C S ++  A ++              +Y I+
Sbjct: 339  SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNSRTYDIV 398

Query: 718  LEGWGQQQNLLKLDEVYREM-KDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    +     +   V++ M +  G EP V  Y I++  +C + +   A+ ++ EM+ +G
Sbjct: 399  LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 458

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYN 1026
            V P  H++  LIN L  + KL +A K+F+     G+ P    ++
Sbjct: 459  VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 502


>gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
            gi|227463006|gb|ACP39955.1| pentatricopeptide repeat
            protein [Gossypium hirsutum]
          Length = 547

 Score =  348 bits (893), Expect = 2e-93
 Identities = 186/359 (51%), Positives = 242/359 (67%), Gaps = 2/359 (0%)
 Frame = +1

Query: 28   LFSPNNLPLNQIYLGASSS--QLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEK 201
            +F+ N+LP ++   G SS+  +++Y  SIH  L   H+     E N +++  +  +D+ +
Sbjct: 41   IFNRNSLPGHETSFGYSSTLHRIIY-RSIHEDLTPKHLSVEHYEKNPAETKLE--QDAAR 97

Query: 202  ICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEY 381
            IC LLST                 ++SP LV+EVLK+LSNAGV+A+ FF WAEKQKGF+Y
Sbjct: 98   ICTLLST--HSGSHADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKY 155

Query: 382  TTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFE 561
             TESYNALI++LGKIKQFK+I  LV+ MK + LL K TF L                 FE
Sbjct: 156  NTESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAIEAFE 215

Query: 562  RMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQ 741
            RM++FG   E SD NR LDTLCKSR V+ A +V              SYTILLEGWG++ 
Sbjct: 216  RMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEH 275

Query: 742  NLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFC 921
            NLL+LDEVY EMK +GFEPDVV YGIL++AYCK++K   A+ELF EME K  +P+ H++C
Sbjct: 276  NLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYC 335

Query: 922  ILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNR 1098
             LINGLGS+K+LSEAL+FFE  K+ G  PEAPTYN++VG+YCWSMR DDAFQ++DEM +
Sbjct: 336  TLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRK 394



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 2/247 (0%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKY-TFNLXXXXXXXXXXXXXX 546
            GF+  T  +N L+D+L K +  +    + D MK +  +    ++ +              
Sbjct: 221  GFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRL 280

Query: 547  XXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEG 726
               +  MK  G   ++      +   CK+++   A ++               Y  L+ G
Sbjct: 281  DEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLING 340

Query: 727  WGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPS 906
             G ++ L +  E +   K  GF P+   Y  L+ AYC S +   A ++  EM      P+
Sbjct: 341  LGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPN 400

Query: 907  QHIFCILINGLGSDKKLSEA-LKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIV 1083
               + I+++ L   ++ +EA  +F +MS   G  P   TY  +V  +C   R D A Q+ 
Sbjct: 401  SRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVW 460

Query: 1084 DEMNRLG 1104
            D+M   G
Sbjct: 461  DQMKAKG 467



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 2/249 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K  GFE    +Y  LI +  K K++     L   M+ K    T + +             
Sbjct: 288  KYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRL 347

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FER K  G T E    N  +   C S ++  A QV              +Y I+
Sbjct: 348  SEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDII 407

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + +   +    +++M +E G EP V  Y I++  +C   +   A +++ +M+ KG
Sbjct: 408  LHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKG 467

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAF 1074
            V P  H++  LI  L    KL EA K+F+     G+ P A  ++ +  +     + D+A 
Sbjct: 468  VLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEAL 527

Query: 1075 QIVDEMNRL 1101
             +  ++N+L
Sbjct: 528  NLARKINKL 536


>gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]
          Length = 551

 Score =  343 bits (880), Expect = 7e-92
 Identities = 179/317 (56%), Positives = 215/317 (67%)
 Frame = +1

Query: 154  DNSSKSTHQAIRDSEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVL 333
            +N    T +  +D+E ICK L                 VE +S  LV+EVLKKLSN+GVL
Sbjct: 89   NNPDAKTDRTAQDAENICKTLYINSSNDSVESFLDNIHVE-MSATLVVEVLKKLSNSGVL 147

Query: 334  AIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXX 513
            A+ FFRWAEKQKGF++TTESY+ALI++LGKIKQFK IW LVD MK+K LLTK TF L   
Sbjct: 148  ALSFFRWAEKQKGFKHTTESYDALIEALGKIKQFKKIWNLVDEMKLKRLLTKNTFALISR 207

Query: 514  XXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXX 693
                         TF +M+KFGL  E+SD NR LDTLCKS+    AQQV           
Sbjct: 208  RYARAKKAKEAIETFRKMRKFGLKAEVSDFNRLLDTLCKSKFATIAQQVFDEMSEKRFKP 267

Query: 694  XXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELF 873
               SYTILLEGWGQ++NLLKL EVYREMKDEG EPDVV YGI++NA+CK+RK  +A  LF
Sbjct: 268  DIKSYTILLEGWGQEKNLLKLKEVYREMKDEGIEPDVVTYGIMINAHCKARKYDEAFALF 327

Query: 874  SEMENKGVEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWS 1053
             EME    +PS HIFC LI GLGS K+L+EAL+ F  SKA G  PE PTYNA+VG+YCWS
Sbjct: 328  DEMEANNCKPSPHIFCTLIIGLGSAKRLNEALEVFRRSKACGFEPEVPTYNALVGAYCWS 387

Query: 1054 MRFDDAFQIVDEMNRLG 1104
            M+ D+A+++VDEM   G
Sbjct: 388  MQLDNAYKVVDEMRECG 404



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +G E    +Y  +I++  K +++   + L D M+      + + F             
Sbjct: 296  KDEGIEPDVVTYGIMINAHCKARKYDEAFALFDEMEANNCKPSPHIFCTLIIGLGSAKRL 355

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  F R K  G   E+   N  +   C S Q+  A +V              +Y I+
Sbjct: 356  NEALEVFRRSKACGFEPEVPTYNALVGAYCWSMQLDNAYKVVDEMRECGVGPNSRTYDII 415

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + +   +   V++ M  E G EP V  Y I++  +C   +   A++++ +M+ KG
Sbjct: 416  LHHLIKDKRTEEAFSVFQRMSREPGCEPTVSTYEIMVRMFCNVERLDMAIQIWDQMKAKG 475

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYN 1026
            V P  H+F  LIN L  + KL +A K+F+     G+ P A  Y+
Sbjct: 476  VLPGMHMFSTLINSLCMEDKLDDACKYFQEMMDMGIRPPAQLYS 519



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 88/404 (21%), Positives = 150/404 (37%), Gaps = 56/404 (13%)
 Frame = +1

Query: 61   IYLGASSSQL-LYCSSIHGSLMKTHVIEISEE-DNSSKSTHQAIRDSEKICKLLSTTPKX 234
            +Y+ +S+  +  +  +IH  +  T V+E+ ++  NS        R +EK      TT   
Sbjct: 109  LYINSSNDSVESFLDNIHVEMSATLVVEVLKKLSNSGVLALSFFRWAEKQKGFKHTTESY 168

Query: 235  XXXXXXXXXXG-VEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQK-------------- 369
                         ++I  L+    LK+L      A+   R+A  +K              
Sbjct: 169  DALIEALGKIKQFKKIWNLVDEMKLKRLLTKNTFALISRRYARAKKAKEAIETFRKMRKF 228

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSM---KIKGLLTKYTFNLXXXXXXXXXXXX 540
            G +     +N L+D+L K K   +   + D M   + K  +  YT  L            
Sbjct: 229  GLKAEVSDFNRLLDTLCKSKFATIAQQVFDEMSEKRFKPDIKSYTILLEGWGQEKNLLKL 288

Query: 541  XXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILL 720
                 +  MK  G+  ++      ++  CK+R+   A  +               +  L+
Sbjct: 289  KE--VYREMKDEGIEPDVVTYGIMINAHCKARKYDEAFALFDEMEANNCKPSPHIFCTLI 346

Query: 721  EGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVE 900
             G G  + L +  EV+R  K  GFEP+V  Y  L+ AYC S +   A ++  EM   GV 
Sbjct: 347  IGLGSAKRLNEALEVFRRSKACGFEPEVPTYNALVGAYCWSMQLDNAYKVVDEMRECGVG 406

Query: 901  PSQHIFCILINGLGSDKKLSEALKFFE--------------------------------- 981
            P+   + I+++ L  DK+  EA   F+                                 
Sbjct: 407  PNSRTYDIILHHLIKDKRTEEAFSVFQRMSREPGCEPTVSTYEIMVRMFCNVERLDMAIQ 466

Query: 982  ---MSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
                 KA GV+P    ++ ++ S C   + DDA +   EM  +G
Sbjct: 467  IWDQMKAKGVLPGMHMFSTLINSLCMEDKLDDACKYFQEMMDMG 510


>ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g71060, mitochondrial; Flags: Precursor
            gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical
            protein; 31939-30407 [Arabidopsis thaliana]
            gi|332197036|gb|AEE35157.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 510

 Score =  336 bits (862), Expect = 9e-90
 Identities = 180/347 (51%), Positives = 230/347 (66%)
 Frame = +1

Query: 64   YLGASSSQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEKICKLLSTTPKXXXX 243
            ++  +S+  LY  S H S ++T V           S + A +D+E+ICK+L  T      
Sbjct: 35   WIHKASNFTLY-GSFHASSVETQV-----------SANDASQDAERICKIL--TKFTDSK 80

Query: 244  XXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYNALIDSLGK 423
                      ++SP L+ EVLKKLSNAGVLA+  F+WAE QKGF++TT +YNALI+SLGK
Sbjct: 81   VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGK 140

Query: 424  IKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFGLTTELSDL 603
            IKQFK+IW LVD MK K LL+K TF L                 F +M++FG   E SD 
Sbjct: 141  IKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDF 200

Query: 604  NRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLDEVYREMKD 783
            NR LDTL KSR V  AQ+V              SYTILLEGWGQ+ NLL++DEV REMKD
Sbjct: 201  NRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKD 260

Query: 784  EGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILINGLGSDKKLSE 963
            EGFEPDVVAYGI++NA+CK++K  +A+  F+EME +  +PS HIFC LINGLGS+KKL++
Sbjct: 261  EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLND 320

Query: 964  ALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            AL+FFE SK++G   EAPTYNA+VG+YCWS R +DA++ VDEM   G
Sbjct: 321  ALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 1/248 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +GFE    +Y  +I++  K K+++      + M+ +    + + F             
Sbjct: 259  KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FER K  G   E    N  +   C S++++ A +               +Y I+
Sbjct: 319  NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378

Query: 718  LEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGV 897
            L    + Q   +  EVY+ M     EP V  Y I++  +C   +   A++++ EM+ KGV
Sbjct: 379  LHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435

Query: 898  EPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQ 1077
             P  H+F  LI  L  + KL EA ++F      G+ P    ++ +  +     R D    
Sbjct: 436  LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTD 495

Query: 1078 IVDEMNRL 1101
            +V +M+RL
Sbjct: 496  LVVKMDRL 503


>ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Glycine max]
          Length = 507

 Score =  336 bits (861), Expect = 1e-89
 Identities = 167/305 (54%), Positives = 220/305 (72%)
 Frame = +1

Query: 190  DSEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQK 369
            D+E IC++LSTTP               + SP LVLEVL KLSNAGVLA+ FFRWAEKQ 
Sbjct: 57   DAEAICRILSTTPASTVDACLAAVPA--KPSPELVLEVLNKLSNAGVLALSFFRWAEKQS 114

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXX 549
             F++TTE+++ALI++LGKI+QFKMIW LV+ MK + LLT  TF+L               
Sbjct: 115  EFKHTTEAFHALIEALGKIRQFKMIWTLVNDMKQRKLLTSDTFSLVARRYARARKAKEAI 174

Query: 550  XTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGW 729
             TFE+M+ +GL   +SD N+ +D LCKS+ V+ A +V              SYTILLEGW
Sbjct: 175  KTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGW 234

Query: 730  GQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQ 909
             QQQNL+K++EV REM+D+GF+ DVVAYGI+MNA+CK++K  +A+ L+ EM+ +GV PS 
Sbjct: 235  SQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSP 294

Query: 910  HIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDE 1089
            H++C LINGLGSDK+L EAL+FFE+SKA+G VPEAPTYNA+VG+YCWS+R DDA+++V E
Sbjct: 295  HVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGE 354

Query: 1090 MNRLG 1104
            M + G
Sbjct: 355  MKKCG 359



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 3/227 (1%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            + KGF+    +Y  ++++  K K+F     L   MK +G+  + + +             
Sbjct: 251  EDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRL 310

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FE  K  G   E    N  +   C S ++  A ++              ++ I+
Sbjct: 311  DEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIV 370

Query: 718  LEGWGQQQNLLKLDEVYREMK--DEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENK 891
            L    + + + +   V+R M   + G EP V  Y I++  +C       AV ++ EM+ K
Sbjct: 371  LHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGK 430

Query: 892  GVEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAM 1032
            G+ P  H+F  L+  L  + KL EA K+F+     G+ P A  ++ +
Sbjct: 431  GILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTL 477



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 57/250 (22%), Positives = 93/250 (37%), Gaps = 5/250 (2%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGL---LTKYTFNLXXXXXXXXXXXX 540
            G +     +N L+D L K K  +    + D M+   L   +  YT  L            
Sbjct: 184  GLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKV 243

Query: 541  XXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILL 720
                    M+  G   ++      ++  CK+++   A  +               Y  L+
Sbjct: 244  NEVC--REMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLI 301

Query: 721  EGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVE 900
             G G  + L +  E +   K  GF P+   Y  ++ AYC S +   A  +  EM+  G+ 
Sbjct: 302  NGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIG 361

Query: 901  PSQHIFCILINGLGSDKKLSEALKFFEMSKAN--GVVPEAPTYNAMVGSYCWSMRFDDAF 1074
            P+   F I+++ L   +++ EA   F        G  P   TY  MV  +C     D A 
Sbjct: 362  PNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAV 421

Query: 1075 QIVDEMNRLG 1104
             + DEM   G
Sbjct: 422  AVWDEMKGKG 431


>ref|XP_006390810.1| hypothetical protein EUTSA_v10018364mg [Eutrema salsugineum]
            gi|557087244|gb|ESQ28096.1| hypothetical protein
            EUTSA_v10018364mg [Eutrema salsugineum]
          Length = 548

 Score =  333 bits (855), Expect = 6e-89
 Identities = 176/355 (49%), Positives = 232/355 (65%)
 Frame = +1

Query: 40   NNLPLNQIYLGASSSQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEKICKLLS 219
            N+  +  I     +S L +  SIH   ++T V  I+ +D    S     +D+E+ICK++S
Sbjct: 58   NSFGIESIPWIQKASNLNFYESIHAGSVETQVSTIAADDEIRVS-----QDAERICKIVS 112

Query: 220  TTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYN 399
                              ++SP L+ EVLKKLSNAGVLA+  F+WAE QKGF++TT SYN
Sbjct: 113  KISDSSVENLLDEAS--VKLSPALMEEVLKKLSNAGVLALSVFKWAENQKGFKHTTASYN 170

Query: 400  ALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFG 579
             LI+SLGKIKQFK++W LVD MK K LL+K TF L                TF +M+ +G
Sbjct: 171  TLIESLGKIKQFKLVWSLVDDMKQKKLLSKDTFALISRRYARARKVKEAITTFHKMEDYG 230

Query: 580  LTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLD 759
               E +D NR LDTL KSR V  AQ+V              SYTILLEGWGQ+ NLL+++
Sbjct: 231  FKMEPTDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVN 290

Query: 760  EVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILINGL 939
            EVY EMKDEGFEPDVV YGI++NA+CK++K  +A+  F+EME +  +PS HIFC LINGL
Sbjct: 291  EVYGEMKDEGFEPDVVTYGIIINAHCKAKKHDEAIRFFNEMEQRNCKPSPHIFCSLINGL 350

Query: 940  GSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            GS+KKL++AL+FFE SK++G   EAPTYNA+VG+YCWS R +DAF++V++M   G
Sbjct: 351  GSEKKLTQALEFFERSKSSGFPLEAPTYNALVGAYCWSKRMEDAFKVVEQMRSKG 405



 Score = 75.1 bits (183), Expect = 5e-11
 Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 3/248 (1%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGL---LTKYTFNLXXXXXXXXXXXX 540
            GF+     +N ++D+L K +       + D MK K     +  YT  L            
Sbjct: 230  GFKMEPTDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRV 289

Query: 541  XXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILL 720
                 +  MK  G   ++      ++  CK+++   A +                +  L+
Sbjct: 290  NE--VYGEMKDEGFEPDVVTYGIIINAHCKAKKHDEAIRFFNEMEQRNCKPSPHIFCSLI 347

Query: 721  EGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVE 900
             G G ++ L +  E +   K  GF  +   Y  L+ AYC S++   A ++  +M +KGV 
Sbjct: 348  NGLGSEKKLTQALEFFERSKSSGFPLEAPTYNALVGAYCWSKRMEDAFKVVEQMRSKGVG 407

Query: 901  PSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQI 1080
            P+   + I+++ L   ++  EA + ++        P   TY  MV  +C   R D A +I
Sbjct: 408  PNARTYDIILHHLIRMQRTKEAYEVYQQMSCE---PTVSTYEIMVRMFCNKERLDMAIKI 464

Query: 1081 VDEMNRLG 1104
             DEM   G
Sbjct: 465  WDEMRGKG 472



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 47/182 (25%), Positives = 80/182 (43%)
 Frame = +1

Query: 556  FERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQ 735
            FER K  G   E    N  +   C S++++ A +V              +Y I+L    +
Sbjct: 363  FERSKSSGFPLEAPTYNALVGAYCWSKRMEDAFKVVEQMRSKGVGPNARTYDIILHHLIR 422

Query: 736  QQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHI 915
             Q   +  EVY++M     EP V  Y I++  +C   +   A++++ EM  KGV P  H+
Sbjct: 423  MQRTKEAYEVYQQMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMRGKGVLPGMHM 479

Query: 916  FCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMN 1095
            F  LI  +  + KL EA ++F      G+      ++ +  +     R D    +  +M+
Sbjct: 480  FSSLITAMCHENKLDEACEYFNEMLDVGIKAPGHMFSRLKQALLDEGRKDKVVDLAVKMD 539

Query: 1096 RL 1101
            RL
Sbjct: 540  RL 541


>ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297334660|gb|EFH65078.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 512

 Score =  333 bits (855), Expect = 6e-89
 Identities = 183/359 (50%), Positives = 230/359 (64%), Gaps = 2/359 (0%)
 Frame = +1

Query: 34   SPNNLPLNQIYLGASSSQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEKICKL 213
            S ++L L  I     +S      S H S ++T V           S +   +D++KICK+
Sbjct: 26   SSSSLSLESIPWIHKASNFTVYGSFHASSVETQV-----------SANDVSQDADKICKI 74

Query: 214  LS--TTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTT 387
            LS  T  K              ++SP L+ EVLKKLSNAGVLA+  F+WAE QKGF++TT
Sbjct: 75   LSKFTDSKVETLLNEASV----KLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTT 130

Query: 388  ESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERM 567
             +YNALI+SLGKIKQFK+IW LVD MK K LL+K TF L                 F +M
Sbjct: 131  SNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDTFALISRRYARARKVKEAITAFHKM 190

Query: 568  KKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNL 747
            + +G   E SD NR LD L KSR V  AQ+V              SYTILLEGWGQ+ NL
Sbjct: 191  EDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 250

Query: 748  LKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCIL 927
            L+++EVY EMKDEGFEPDVVAYGI++NAYCK++K  +AV  F+EME +  +PS HIFC L
Sbjct: 251  LRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSL 310

Query: 928  INGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
            INGLGS+KKL++AL+FFE SK++G   EAPTYNA+VG+YCWS R +DAF+ VDEM   G
Sbjct: 311  INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKG 369



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 1/248 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +GFE    +Y  +I++  K K++       + M+ +    + + F             
Sbjct: 261  KDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 320

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FER K  G   E    N  +   C S++++ A +               +Y I+
Sbjct: 321  NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDII 380

Query: 718  LEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGV 897
            L    + Q   +  EVY++M     EP V  Y I++  +C   +   A++++ EM+ KGV
Sbjct: 381  LHHLIRMQRTKEAYEVYQKMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 437

Query: 898  EPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQ 1077
             P  H+F  LI  L  + KL EA ++F      G+ P    ++ +  +     R D    
Sbjct: 438  LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVAD 497

Query: 1078 IVDEMNRL 1101
            +  +M+RL
Sbjct: 498  LAVKMDRL 505


>ref|XP_006605955.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Glycine max]
          Length = 512

 Score =  326 bits (836), Expect = 9e-87
 Identities = 165/305 (54%), Positives = 213/305 (69%)
 Frame = +1

Query: 190  DSEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQK 369
            D+E IC++LSTT                + SP LVLEVL +LSNAGVLA+ FFRWAEKQ 
Sbjct: 63   DAEAICRILSTTRGFTVDASLAAVSA--KPSPELVLEVLNRLSNAGVLALSFFRWAEKQS 120

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXX 549
             F+YTTE+++ALI+ LGKI+QFKMIW LV+ MK + LLT  TF L               
Sbjct: 121  EFKYTTEAFHALIEGLGKIRQFKMIWTLVNGMKQRKLLTSETFALVARRYARARKAKEAI 180

Query: 550  XTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGW 729
             TFE+M+++GL    SD NR +D LCKS+ V+ A +V              SYTILLEGW
Sbjct: 181  ETFEKMEQYGLKPHASDFNRLVDVLCKSKCVEEAHEVFDKMRHLRLDPDIKSYTILLEGW 240

Query: 730  GQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQ 909
             QQQNL+K++EV REM+D+GF+ DVVAYGI+MNAYCK++K   A+ L+ EM+ KG+ PS 
Sbjct: 241  SQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAYCKAKKFDDAIGLYHEMKAKGLRPSP 300

Query: 910  HIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDE 1089
            H++C LI GLGS K+L EAL+FFE+SKA+G  PEAPTYNA+VG+YCWS+R DDA+++V E
Sbjct: 301  HVYCTLIKGLGSHKRLDEALEFFEVSKASGFAPEAPTYNAVVGAYCWSLRMDDAYRMVGE 360

Query: 1090 MNRLG 1104
            M + G
Sbjct: 361  MKKCG 365



 Score = 70.9 bits (172), Expect = 9e-10
 Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 2/226 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            + KGF+    +Y  ++++  K K+F     L   MK KGL  + + +             
Sbjct: 257  EDKGFQLDVVAYGIIMNAYCKAKKFDDAIGLYHEMKAKGLRPSPHVYCTLIKGLGSHKRL 316

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FE  K  G   E    N  +   C S ++  A ++              ++ I+
Sbjct: 317  DEALEFFEVSKASGFAPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDII 376

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    + + + +   V++ M  E G +  V  Y I++   C   +   AV ++ EM+ KG
Sbjct: 377  LHHLIEGRRVEEACSVFQRMSGEFGCKASVTTYEIMVRMLCNEERLDMAVAVWDEMKGKG 436

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAM 1032
            + P  H+F  L+  L  + KL EA K+F+     G+ P A  ++ +
Sbjct: 437  ILPGMHLFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTL 482



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 4/252 (1%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGL---LTKYTFNLXXXXXXXXX 531
            +Q G +     +N L+D L K K  +    + D M+   L   +  YT  L         
Sbjct: 187  EQYGLKPHASDFNRLVDVLCKSKCVEEAHEVFDKMRHLRLDPDIKSYTILLEGWSQQQNL 246

Query: 532  XXXXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYT 711
                       M+  G   ++      ++  CK+++   A  +               Y 
Sbjct: 247  IKVNEVC--REMEDKGFQLDVVAYGIIMNAYCKAKKFDDAIGLYHEMKAKGLRPSPHVYC 304

Query: 712  ILLEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENK 891
             L++G G  + L +  E +   K  GF P+   Y  ++ AYC S +   A  +  EM+  
Sbjct: 305  TLIKGLGSHKRLDEALEFFEVSKASGFAPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKC 364

Query: 892  GVEPSQHIFCILINGLGSDKKLSEALKFFE-MSKANGVVPEAPTYNAMVGSYCWSMRFDD 1068
            G+ P+   F I+++ L   +++ EA   F+ MS   G      TY  MV   C   R D 
Sbjct: 365  GIGPNSRTFDIILHHLIEGRRVEEACSVFQRMSGEFGCKASVTTYEIMVRMLCNEERLDM 424

Query: 1069 AFQIVDEMNRLG 1104
            A  + DEM   G
Sbjct: 425  AVAVWDEMKGKG 436


>ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Capsella rubella]
            gi|482570283|gb|EOA34471.1| hypothetical protein
            CARUB_v10022011mg [Capsella rubella]
          Length = 512

 Score =  326 bits (836), Expect = 9e-87
 Identities = 181/361 (50%), Positives = 229/361 (63%)
 Frame = +1

Query: 22   TSLFSPNNLPLNQIYLGASSSQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEK 201
            TS  SP++  L  I     +S L    S H   ++T V           ST     D+E+
Sbjct: 23   TSSSSPSS-SLESIPWIHKASTLKVYKSFHAPSVETQV-----------STDDVSHDAER 70

Query: 202  ICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEY 381
            ICK+L  T                ++SP LV EVLKKLSNAG LA+  F+WAE QKGF++
Sbjct: 71   ICKVL--TKFTDSNVETLLNEASVKLSPALVEEVLKKLSNAGFLALSVFKWAENQKGFKH 128

Query: 382  TTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFE 561
            TT SYNALI+SLGKIKQFK+IW LVD MK K LL++ TF L                 F 
Sbjct: 129  TTASYNALIESLGKIKQFKLIWCLVDDMKQKKLLSRDTFALISRRYARARKVKEAITAFH 188

Query: 562  RMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQ 741
            +M+++G   E SD NR LDTL KSR V  AQ+V              SYTILLEGWGQ+ 
Sbjct: 189  KMEEYGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKIKKKRFEPDIKSYTILLEGWGQEL 248

Query: 742  NLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFC 921
            NLL+++EVY EMKDEGFEPDVV YGI++NA+CK++K  +AV  F+EME +  +PS HIFC
Sbjct: 249  NLLRVNEVYGEMKDEGFEPDVVTYGIIINAHCKAKKYDEAVRFFNEMEQRNCKPSPHIFC 308

Query: 922  ILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRL 1101
             LINGLGS++KL++AL+FFE SK++G   EAPTYNA+VG+YCWS R +DAF+ V+EM   
Sbjct: 309  SLINGLGSERKLNKALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVEEMRLK 368

Query: 1102 G 1104
            G
Sbjct: 369  G 369



 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 1/248 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            K +GFE    +Y  +I++  K K++       + M+ +    + + F             
Sbjct: 261  KDEGFEPDVVTYGIIINAHCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSERKL 320

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FER K  G   E    N  +   C S++++ A +               +Y I+
Sbjct: 321  NKALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVEEMRLKGVGPNARTYDII 380

Query: 718  LEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGV 897
            L    ++Q   +  EVY++M     EP V  Y I++  +C   +   A++++ EM+ KGV
Sbjct: 381  LHHLTRKQRTKEAYEVYKKMS---CEPTVGTYEIMVRMFCNEERLDMAIKIWDEMKGKGV 437

Query: 898  EPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQ 1077
             P  H+F  LI  L  + KL EA ++F      G+ P    ++ +  +     R D   +
Sbjct: 438  LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGQMFSRLKQTLLDEGRKDKVVE 497

Query: 1078 IVDEMNRL 1101
            +  +M+RL
Sbjct: 498  LAVKMDRL 505


>ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355481588|gb|AES62791.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 507

 Score =  323 bits (827), Expect = 1e-85
 Identities = 161/305 (52%), Positives = 212/305 (69%), Gaps = 1/305 (0%)
 Frame = +1

Query: 193  SEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKG 372
            +E IC++LSTTP+              E+SP LV+ VL KLSNAG+LA+ FFRWAEKQ+G
Sbjct: 58   AETICRILSTTPESPVDVSLRNFP--VEVSPELVVAVLNKLSNAGILALSFFRWAEKQQG 115

Query: 373  FEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXX 552
            F + TE ++ALI++LGKI+QFKMIW LVD MK + LL   TF+L                
Sbjct: 116  FNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALK 175

Query: 553  TFERMKKFGLTTELSDLNRFLDTLCKSR-QVKTAQQVXXXXXXXXXXXXXXSYTILLEGW 729
            TFERM+K+GL  ++SD N+ +D LCKS+  V+ AQ++              SYTIL+EGW
Sbjct: 176  TFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGW 235

Query: 730  GQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQ 909
             QQQNLLK+DEV REMKD+GF+PDVV YGI++NAYCK++K  +A+ ++ +M +K V PS 
Sbjct: 236  SQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSP 295

Query: 910  HIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDE 1089
            HI+C  I GLG+  ++ EA +FFE SKA+G  PEAPTYNA+V +YCWSMR DDA++IV E
Sbjct: 296  HIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGE 355

Query: 1090 MNRLG 1104
            M  LG
Sbjct: 356  MKELG 360



 Score = 68.2 bits (165), Expect = 6e-09
 Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 2/225 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQF-KMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXX 537
            K  GF+    +Y  +I++  K K++ + I +  D +      + + +             
Sbjct: 252  KDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRM 311

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FE+ K  G   E    N  +   C S ++  A ++              +Y I+
Sbjct: 312  DEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDII 371

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    +     +   V++ M  E G EP V  Y I++  +C   +   A+ +++EM++KG
Sbjct: 372  LVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKG 431

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNA 1029
            + P  H+F  LI  L  + KL +A ++F+     G+ P A  ++A
Sbjct: 432  ILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSA 476


>ref|XP_004238857.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Solanum lycopersicum]
          Length = 521

 Score =  320 bits (821), Expect = 5e-85
 Identities = 167/341 (48%), Positives = 224/341 (65%)
 Frame = +1

Query: 76   SSSQLLYCSSIHGSLMKTHVIEISEEDNSSKSTHQAIRDSEKICKLLSTTPKXXXXXXXX 255
            ++S LL  S  H S+  TH+       NS+    + I+++E+ICK+L             
Sbjct: 43   TTSLLLNRSIHHDSVKNTHL-------NSNPQNPEIIQEAERICKILLKNTNVADALSST 95

Query: 256  XXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQF 435
                   +SPLLV EV+KKLSN+G+LA+ FFRWAEKQ GF +T ESY+ LI++LGKIKQF
Sbjct: 96   SV----NVSPLLVNEVIKKLSNSGILALSFFRWAEKQNGFVHTAESYHGLIEALGKIKQF 151

Query: 436  KMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFL 615
            KM+W+LV+ +K KGLL +  F L                 FERM+K+GL  EL D NR L
Sbjct: 152  KMVWILVNELKTKGLLCREAFALVSRRFARARKVKEAIEAFERMEKYGLIHELQDFNRLL 211

Query: 616  DTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFE 795
            DTL KSR V  AQ+V              SYTILLEGWGQ++NLL+L+EVYREM  +G E
Sbjct: 212  DTLSKSRHVGNAQEVFDKWKNRKFKPNIKSYTILLEGWGQEKNLLRLNEVYREMMADGIE 271

Query: 796  PDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQHIFCILINGLGSDKKLSEALKF 975
            PDVV+YGI+++A+CK +K  +A+EL  EME K ++ + H++C LINGLGS+K+L  ALK+
Sbjct: 272  PDVVSYGIMIHAHCKVKKYDEAIELLHEMERKKIKVTPHVYCTLINGLGSEKRLVLALKY 331

Query: 976  FEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNR 1098
            F++ K +G   E  TYNAMVG+YCWS+  DDA+++VDEM R
Sbjct: 332  FKLYKGSGFDLEVFTYNAMVGAYCWSLCMDDAYRLVDEMRR 372



 Score = 71.2 bits (173), Expect = 7e-10
 Identities = 62/296 (20%), Positives = 117/296 (39%), Gaps = 39/296 (13%)
 Frame = +1

Query: 334  AIGFFRWAEKQKGFEYTTESYNALIDSLGKIKQFKMIWVLVD---SMKIKGLLTKYTFNL 504
            AI  F   EK  G  +  + +N L+D+L K +       + D   + K K  +  YT  L
Sbjct: 188  AIEAFERMEKY-GLIHELQDFNRLLDTLSKSRHVGNAQEVFDKWKNRKFKPNIKSYTILL 246

Query: 505  XXXXXXXXXXXXXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXX 684
                             +  M   G+  ++      +   CK ++   A ++        
Sbjct: 247  EGWGQEKNLLRLNE--VYREMMADGIEPDVVSYGIMIHAHCKVKKYDEAIELLHEMERKK 304

Query: 685  XXXXXXSYTILLEGWGQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYC--------- 837
                   Y  L+ G G ++ L+   + ++  K  GF+ +V  Y  ++ AYC         
Sbjct: 305  IKVTPHVYCTLINGLGSEKRLVLALKYFKLYKGSGFDLEVFTYNAMVGAYCWSLCMDDAY 364

Query: 838  --------------------------KSRKPTKAVELFSEMENK-GVEPSQHIFCILING 936
                                      K+R+ ++A  +F +M N  G EP+   + I++  
Sbjct: 365  RLVDEMRRCKIGPNTRTYDIILHHLIKARRMSEAYTVFQKMSNDPGCEPTVSTYEIMVRM 424

Query: 937  LGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDEMNRLG 1104
              ++++   ALK ++  KANGV+P   +++ ++ S+C   + DDA +   EM  +G
Sbjct: 425  FCNEERTDMALKVWDKMKANGVLPGMHSFSTLINSFCRESKLDDACRYFQEMLDMG 480



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 2/221 (0%)
 Frame = +1

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGL-LTKYTFNLXXXXXXXXXXXXXX 546
            G E    SY  +I +  K+K++     L+  M+ K + +T + +                
Sbjct: 269  GIEPDVVSYGIMIHAHCKVKKYDEAIELLHEMERKKIKVTPHVYCTLINGLGSEKRLVLA 328

Query: 547  XXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEG 726
               F+  K  G   E+   N  +   C S  +  A ++              +Y I+L  
Sbjct: 329  LKYFKLYKGSGFDLEVFTYNAMVGAYCWSLCMDDAYRLVDEMRRCKIGPNTRTYDIILHH 388

Query: 727  WGQQQNLLKLDEVYREMK-DEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEP 903
              + + + +   V+++M  D G EP V  Y I++  +C   +   A++++ +M+  GV P
Sbjct: 389  LIKARRMSEAYTVFQKMSNDPGCEPTVSTYEIMVRMFCNEERTDMALKVWDKMKANGVLP 448

Query: 904  SQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYN 1026
              H F  LIN    + KL +A ++F+     G+ P  P ++
Sbjct: 449  GMHSFSTLINSFCRESKLDDACRYFQEMLDMGMRPPIPLFD 489


>gb|ESW15022.1| hypothetical protein PHAVU_007G037500g [Phaseolus vulgaris]
          Length = 523

 Score =  318 bits (816), Expect = 2e-84
 Identities = 159/305 (52%), Positives = 213/305 (69%)
 Frame = +1

Query: 190  DSEKICKLLSTTPKXXXXXXXXXXXGVEEISPLLVLEVLKKLSNAGVLAIGFFRWAEKQK 369
            ++E IC++LS +              V   SP LVLEVL KLSNAG LA+ FFRWAE+Q 
Sbjct: 74   NAEAICRILSNSRDSTVDVSLAAV--VVNPSPELVLEVLNKLSNAGTLALSFFRWAERQS 131

Query: 370  GFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLLTKYTFNLXXXXXXXXXXXXXXX 549
             F++TTE+++ALI++LGKI+QFKMIW L+D MK + LLT  TF L               
Sbjct: 132  EFKHTTETFHALIEALGKIRQFKMIWTLIDDMKQRKLLTSDTFALVARRYARARKVKEAT 191

Query: 550  XTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTILLEGW 729
              FE+M+++GL   ++D NR +D LCKS+ V+ A +V              SYTILLEGW
Sbjct: 192  EIFEKMERYGLKPHVTDFNRLIDVLCKSKCVEKAHEVFDKMRRLGLDPDIKSYTILLEGW 251

Query: 730  GQQQNLLKLDEVYREMKDEGFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKGVEPSQ 909
             Q QNL KL+E+ REM+D+GF+ DVVAYGI++NAYCK++K  + + L+ EM+ KGV PS 
Sbjct: 252  SQLQNLTKLNELCREMEDKGFQIDVVAYGIIINAYCKAKKFDETIGLYHEMKAKGVRPSP 311

Query: 910  HIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAMVGSYCWSMRFDDAFQIVDE 1089
            H++C LINGLGSDK+L++AL+FFE+SKA+G  PEAPTYNA+VG+YCWSMR DDA+++V E
Sbjct: 312  HVYCTLINGLGSDKRLNQALEFFEVSKASGFAPEAPTYNAVVGAYCWSMRMDDAYRMVGE 371

Query: 1090 MNRLG 1104
            M + G
Sbjct: 372  MKKCG 376



 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 2/226 (0%)
 Frame = +1

Query: 361  KQKGFEYTTESYNALIDSLGKIKQFKMIWVLVDSMKIKGLL-TKYTFNLXXXXXXXXXXX 537
            + KGF+    +Y  +I++  K K+F     L   MK KG+  + + +             
Sbjct: 268  EDKGFQIDVVAYGIIINAYCKAKKFDETIGLYHEMKAKGVRPSPHVYCTLINGLGSDKRL 327

Query: 538  XXXXXTFERMKKFGLTTELSDLNRFLDTLCKSRQVKTAQQVXXXXXXXXXXXXXXSYTIL 717
                  FE  K  G   E    N  +   C S ++  A ++              ++ I+
Sbjct: 328  NQALEFFEVSKASGFAPEAPTYNAVVGAYCWSMRMDDAYRMVGEMKKCGIGPNSRTFDII 387

Query: 718  LEGWGQQQNLLKLDEVYREMKDE-GFEPDVVAYGILMNAYCKSRKPTKAVELFSEMENKG 894
            L    +   + +   V+R M  E G EP V  Y I++  +C   +   A+ ++ EM+ KG
Sbjct: 388  LHHLIKVGRIEEACTVFRRMNGEFGCEPSVSTYEIMVRMFCNEVRLDMAMAVWDEMKEKG 447

Query: 895  VEPSQHIFCILINGLGSDKKLSEALKFFEMSKANGVVPEAPTYNAM 1032
            + P  H+F  LI  L  + KL+EA K+F+     G+ P A  ++ +
Sbjct: 448  ILPGVHMFSTLICSLCHENKLNEACKYFQEMLDVGIRPPAKMFSTL 493