BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00046473
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...   164   9e-39
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37
ref|XP_004293847.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
gb|EMJ14013.1| hypothetical protein PRUPE_ppa003248mg [Prunus pe...   154   9e-36
ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [A...   143   3e-32
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus...   142   6e-32
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...   140   2e-31
gb|EOX92409.1| Pentatricopeptide repeat-containing protein, puta...   134   1e-29
gb|EOX92408.1| Pentatricopeptide repeat-containing protein, puta...   134   1e-29
gb|EOX92407.1| Pentatricopeptide repeat-containing protein, puta...   134   1e-29
ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-28
ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citr...   131   1e-28
gb|EXB51209.1| hypothetical protein L484_019200 [Morus notabilis]     125   8e-27
ref|XP_006408619.1| hypothetical protein EUTSA_v10001906mg [Eutr...   117   1e-24
ref|XP_003602250.1| Pentatricopeptide repeat-containing protein ...   117   1e-24
ref|XP_006293706.1| hypothetical protein CARUB_v10022664mg [Caps...   116   4e-24

>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score =  164 bits (416), Expect = 9e-39
 Identities = 87/167 (52%), Positives = 109/167 (65%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYC+ N M EA+ +  DMK+RG+ PDVIT+TVLLN C K  L  S+S  +    + + 
Sbjct: 642  INGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENM 701

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               SA+  E+ +M +KPDV+CYTVLIDKHCK NNIQDA  L +EMID GL PDTVTYTAL
Sbjct: 702  MDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTAL 761

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
            LSG C + N+     L D M     + D  T+S L   + ILK +KV
Sbjct: 762  LSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL---HCILKVRKV 805



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/172 (26%), Positives = 90/172 (52%), Gaps = 20/172 (11%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLL-NGCFKTSLEKS------------ 142
            +NGYC++N + +AF L   +  +G I    +F  LL N C +   EK+            
Sbjct: 537  VNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNI 596

Query: 143  NSDQNFFVREVSTKLESA-------VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
            N     + + +    ++        V   +++  L PDV+ YT++I+ +C+MN +++A+ 
Sbjct: 597  NPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWH 656

Query: 302  LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITL 457
            +L +M + G++PD +TYT LL+ C ++ ++  + + +D M + +N  D   L
Sbjct: 657  VLGDMKNRGIEPDVITYTVLLNNCSKI-DLRSSSSSLDAMKSKENMMDPSAL 707



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           I G+C+   + EA  +F DM+  GV P+  ++T  + G C         SD  F      
Sbjct: 226 IKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLH-----GRSDLGF------ 274

Query: 179 TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTA 358
                 V+ +V+  ++  DV  YTV+I   C    +++A  +L EM   G  PD   Y A
Sbjct: 275 -----KVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCA 329

Query: 359 LLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWG 475
           L+SG C + N+     L D M +   + + + LS++  G
Sbjct: 330 LISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQG 368



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           ++  CK   + EA +L  +MK + ++PD+I +T +++G F                 +  
Sbjct: 401 MDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYF-----------------LKG 443

Query: 182 KLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYT 355
           K+  A  +  E+ ++  KPD+V Y VL     +    Q+A  LL+ M   G++PDTVT+ 
Sbjct: 444 KVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHN 503

Query: 356 ALLSGCCRLKNVDGTQTLVD 415
            ++ G C    VD  Q   D
Sbjct: 504 MIIEGLCIGGKVDDAQAFFD 523



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/159 (25%), Positives = 73/159 (45%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           I+GYC    +L+A  L ++M S+GV  + +  + +L G  +  +    ++Q         
Sbjct: 331 ISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQ--------- 381

Query: 182 KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
                   E  +M +  D  CY V++D  CK+  +++A +LL EM    + PD + YT +
Sbjct: 382 ------FKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTV 435

Query: 362 LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
           +SG      V     +   M    ++ D +T + L  G+
Sbjct: 436 ISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGF 474


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial [Vitis vinifera]
          Length = 817

 Score =  160 bits (404), Expect = 2e-37
 Identities = 88/167 (52%), Positives = 108/167 (64%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYC+ NC+ EA  +FNDMK RG+ PDVIT+TV+L+G  K +L+ + S Q     E   
Sbjct: 650  INGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEK 709

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S    E+ EM +KPDVVCYTVLID HCK NN+QDA  L  EMI  GLQPD VTYTAL
Sbjct: 710  MDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTAL 769

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
            LS CC   ++D   TLV+ M+    + D   +S L  G  ILKA+KV
Sbjct: 770  LSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRG--ILKARKV 814



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/143 (25%), Positives = 77/143 (53%), Gaps = 20/143 (13%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGV-IPDVITFTVLLNGCFKTSLEKS----------NS 148
           ++GYCK+N   +A++LF+ +  +G+ +     F +L + C +   +K+          + 
Sbjct: 545 VDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDV 604

Query: 149 DQN---------FFVREVSTKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           + N          F R+   K    V   ++E  + PDV+ YT++I+ +C++N +++A  
Sbjct: 605 EPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARD 664

Query: 302 LLHEMIDNGLQPDTVTYTALLSG 370
           + ++M + G++PD +TYT +L G
Sbjct: 665 IFNDMKERGIKPDVITYTVVLDG 687



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLE-------KSNSDQNF 160
           I+ YCK+  +L+A  L NDM S G+  + +  + +L    +  +        K   D   
Sbjct: 339 IHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGI 398

Query: 161 FVREVST-----------KLESAV--IGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ EV             K+E AV  + E+   ++  DVV YT LI  +C    + DA  
Sbjct: 399 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 458

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCR 379
           +  EM + G++PD VTY  L+ G  R
Sbjct: 459 MFEEMKERGIEPDIVTYNILVGGFSR 484



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           I GYC    +++A  +F +MK RG+ PD++T+ +L+ G  +  L+K   +    +     
Sbjct: 444 IAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGL 503

Query: 182 KLESAVIGEVLEMQLKPDVV-------------C---YTVLIDKHCKMNNIQDAFKLLHE 313
           K  SA    ++E       V             C   Y+ ++D +CK N  + A++L   
Sbjct: 504 KPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSR 563

Query: 314 MIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSAL 466
           +   G+     +   LLS  C     D    L++ M A D + ++I    L
Sbjct: 564 LSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKL 614


>ref|XP_004293847.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 307

 Score =  154 bits (390), Expect = 9e-36
 Identities = 81/168 (48%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFV-REVS 178
           IN YC+ N + EA  LF+DMK RG+ PD+IT+TVLL+G  K ++ +  S  +    RE  
Sbjct: 138 INSYCRENSLREAHDLFHDMKKRGIQPDIITYTVLLDGFSKRNIRRVRSPLDARGNREEM 197

Query: 179 TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTA 358
               + +  E+ ++ ++PD +CYTVL+D+HCK +N++DA  L   MI+ GL+PDTVTYTA
Sbjct: 198 ADASTILWTEMKQLGIQPDAICYTVLVDRHCKADNLRDAIALFDVMIERGLKPDTVTYTA 257

Query: 359 LLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
           LLSGCC+  +VD   TLV+ M++   Q D  TLS L+ G  ILKAKKV
Sbjct: 258 LLSGCCKRGDVDRAVTLVNEMSSRGIQPDAYTLSVLQHG--ILKAKKV 303



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFK-TSLEKSNSDQNFFVREVS 178
           + GYC++N   +A++L + +   G I     F VL N C +  ++      Q  F   V 
Sbjct: 34  VRGYCEANKTRKAYELISKLAKHGTINKGACFKVLSNLCMEGDNVRAILLFQRMFALNVE 93

Query: 179 TK--LESAVI------GEV----------LEMQLKPDVVCYTVLIDKHCKMNNIQDAFKL 304
            K  + S +I      GEV          +E    PD V YTV+I+ +C+ N++++A  L
Sbjct: 94  PKTIMYSKLIASLCQAGEVQKARQFFYSSVERGFTPDAVDYTVMINSYCRENSLREAHDL 153

Query: 305 LHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITL 457
            H+M   G+QPD +TYT LL G  + +N+   ++ +D     +  AD  T+
Sbjct: 154 FHDMKKRGIQPDIITYTVLLDGFSK-RNIRRVRSPLDARGNREEMADASTI 203


>gb|EMJ14013.1| hypothetical protein PRUPE_ppa003248mg [Prunus persica]
          Length = 589

 Score =  154 bits (390), Expect = 9e-36
 Identities = 82/167 (49%), Positives = 109/167 (65%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           IN YC+ NC+ EA  LF DMK +G+ PD+IT+TVLL+   K +L + +S       +   
Sbjct: 421 INSYCRVNCLREAHDLFYDMKRKGIQPDIITYTVLLDSYSKRNLRRVHSPLGASGDKEER 480

Query: 182 KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
                +  E+ EM+++PDV+CYTVLID+ CK +N+QDA  L  EM + GL+PDTVTYTAL
Sbjct: 481 MNAFTLWTEMKEMEIRPDVICYTVLIDRQCKTDNLQDAIALFDEMTNRGLEPDTVTYTAL 540

Query: 362 LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
           LSGCC   +VD   TLV+ M++   Q D  TL  L+ G  ILKAKKV
Sbjct: 541 LSGCCNRGDVDKAVTLVNEMSSKGIQPDSHTLLVLQHG--ILKAKKV 585



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           I G+C      EA  +F DM+ RGV+PD  T+  ++ G C    L K+ +  N  V +  
Sbjct: 133 IRGFCDEMKFDEAESIFLDMEKRGVVPDSYTYGAIICGYCKNRFLLKALTLHNDMVSK-G 191

Query: 179 TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTA 358
            K    ++  +L+      ++ YT LI  +C   N+ +A  LL EM + GL+PD  TY  
Sbjct: 192 IKTNCVIVSFILQCMY---IMHYTTLIKGYCLQGNVVNAVNLLEEMKEKGLKPDITTYNV 248

Query: 359 LLSGCCRLKNVDGTQTLVDMMTAPDNQADEIT 454
           L +G  R         L+D M +   + D +T
Sbjct: 249 LAAGFSRNGLGAEALDLLDYMESQGFKPDSVT 280



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 22/143 (15%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRG-VIPDVITFTVLLNGC-----------FKTSLEKSN 145
           I+GYC++    +A++L   +   G ++   + F VL N C            ++ L  + 
Sbjct: 316 ISGYCEAKDTRKAYELLIRLAKGGTLVKKGVCFKVLSNLCVEGDNDRAILLLESMLALNV 375

Query: 146 SDQNFFVREVSTKLESAVIGEV----------LEMQLKPDVVCYTVLIDKHCKMNNIQDA 295
             +     +V   L  A  GEV          +E    PDV+ YT+LI+ +C++N +++A
Sbjct: 376 EPRKTMYNKVIASLCKA--GEVKKAHWFFDTLVERGFTPDVINYTMLINSYCRVNCLREA 433

Query: 296 FKLLHEMIDNGLQPDTVTYTALL 364
             L ++M   G+QPD +TYT LL
Sbjct: 434 HDLFYDMKRKGIQPDIITYTVLL 456


>ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Glycine max]
          Length = 801

 Score =  147 bits (370), Expect = 2e-33
 Identities = 78/167 (46%), Positives = 110/167 (65%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            IN YC+ NC+ EA  LF DMK RG+ PDVITFTVLL+G  K  L K  S      R+ ++
Sbjct: 635  INSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHG--KRKTTS 692

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S ++ ++ +M++ PDVVCYTVL+D H K +N Q A  L  +MI++GL+PDT+TYTAL
Sbjct: 693  LYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTAL 752

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
            +SG C   +V+   TL++ M++     D   +SAL+ G  I+KA+KV
Sbjct: 753  VSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRG--IIKARKV 797



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 24/189 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLN--GCFKTSLE-----KSNSDQNF 160
           I+GYCKS+ +L A  L ++M SRGV  + +  + +L+  G    +LE     K   +   
Sbjct: 324 IHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGM 383

Query: 161 FVREVST-----------KLESAV--IGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+  V+            K+E AV  + E+   +L  DV  YT LI+ +C   ++  AF 
Sbjct: 384 FLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFN 443

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTA----PDNQADEITLSALR 469
           +  EM + GL+PD VTY  L +G  R  +   T  L+D M +    P++   ++ +  L 
Sbjct: 444 MFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLC 503

Query: 470 WGYRILKAK 496
            G ++L+A+
Sbjct: 504 SGGKVLEAE 512



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRG-VIPDVITFTVLLNGCFKTSLEKSNS--DQNFFVRE 172
           +NGYC+++ + +++++F  + ++G +      F +L   C    +EK+    D+      
Sbjct: 530 VNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNV 589

Query: 173 VSTKLESAVIGEVL-----------------EMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
             +K+  + I   L                      PDVV YT++I+ +C+MN +Q+A  
Sbjct: 590 EPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHD 649

Query: 302 LLHEMIDNGLQPDTVTYTALLSG 370
           L  +M   G++PD +T+T LL G
Sbjct: 650 LFQDMKRRGIKPDVITFTVLLDG 672



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           INGYC    ++ AF +F +MK +G+ PD++T+ VL  G  +    +       F+     
Sbjct: 429 INGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGM 488

Query: 182 KLESAVI----------GEVLEMQL------KPDVVCYTVLIDKHCKMNNIQDAFKLLHE 313
           K  S             G+VLE ++        ++  Y+ +++ +C+ + ++ ++++  +
Sbjct: 489 KPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLK 548

Query: 314 MIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSAL 466
           +++ G      +   LLS  C   +++    L+D M   + +  +I  S +
Sbjct: 549 LLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKI 599


>ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [Amborella trichopoda]
            gi|548859411|gb|ERN17091.1| hypothetical protein
            AMTR_s00044p00087550 [Amborella trichopoda]
          Length = 872

 Score =  143 bits (360), Expect = 3e-32
 Identities = 77/167 (46%), Positives = 107/167 (64%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYC+ N + EA +LFNDMK +G  PDVITFT L +G FK  L++    +     +V+T
Sbjct: 705  INGYCRVNHLQEACKLFNDMKQKGPRPDVITFTALFDGYFKEILQEDLRYRGKRRVQVAT 764

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
            ++   ++ E+ EM LKPD++CYTVLID HCK+N + DAF+L  EM+  G+ PD V YT L
Sbjct: 765  EIFK-LLEEMKEMGLKPDLICYTVLIDGHCKINRLHDAFQLFQEMLGRGITPDIVAYTTL 823

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
            +SG C   NV     LV+ M     + D++T S L  G  +LKA+K+
Sbjct: 824  ISGYCNRGNVKKAANLVEEMLFRGLKPDKLTYSVLEHG--VLKARKL 868



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLE-------KSNSDQNF 160
           I GYC    +++A  L  DM S+GV    I    L+    K  L        +   +   
Sbjct: 390 ITGYCNVGNLVKALSLHEDMISKGVKTTCIILGYLIQSLRKNGLAIEAIELFERFRNSGL 449

Query: 161 FVREV-------------STKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ EV             +T++   ++ E+   +L PD + YT LID +C+  ++  A+K
Sbjct: 450 FLDEVLYGMVIDAYCKQGNTEVALQLMDEMKGRRLAPDSLHYTSLIDGYCRNGDLGHAYK 509

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWG 475
           +  +M++ GL+P+TVTY  L +G CR   V  T  L++ M       + +T S + +G
Sbjct: 510 VFKDMVETGLEPNTVTYNILANGFCRKGLVQETFDLLECMLDQGLVPNRVTYSTVIYG 567



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/159 (27%), Positives = 76/159 (47%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           I+ YCK      A QL ++MK R + PD + +T L++G  +      N D     +    
Sbjct: 460 IDAYCKQGNTEVALQLMDEMKGRRLAPDSLHYTSLIDGYCR------NGDLGHAYK---- 509

Query: 182 KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
                V  +++E  L+P+ V Y +L +  C+   +Q+ F LL  M+D GL P+ VTY+ +
Sbjct: 510 -----VFKDMVETGLEPNTVTYNILANGFCRKGLVQETFDLLECMLDQGLVPNRVTYSTV 564

Query: 362 LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
           + G C+   +   ++    +         +T SA+  GY
Sbjct: 565 IYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFSAMISGY 603



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 46/159 (28%), Positives = 76/159 (47%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I+GYC+     EA++LF  +  + V+P     + L++   K      + D+   V E+  
Sbjct: 600  ISGYCEQRHTKEAYELFKRLVKKRVLPSSTACSRLISNLCKDE----DLDKALMVHEMM- 654

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
             +   VI         PD + Y+ LI    ++ N+  A  L   ++  GL PD +TYTAL
Sbjct: 655  -VADGVI---------PDEITYSTLISAFAQLGNMTKARDLYENLMVRGLSPDVITYTAL 704

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
            ++G CR+ ++     L + M     + D IT +AL  GY
Sbjct: 705  INGYCRVNHLQEACKLFNDMKQKGPRPDVITFTALFDGY 743



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSD-------QNF 160
            I+GYC++  +  A+++F DM   G+ P+ +T+ +L NG  +  L +   D       Q  
Sbjct: 495  IDGYCRNGDLGHAYKVFKDMVETGLEPNTVTYNILANGFCRKGLVQETFDLLECMLDQGL 554

Query: 161  FVREVST-----------KLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
                V+            KL+ A      +++  L    V ++ +I  +C+  + ++A++
Sbjct: 555  VPNRVTYSTVIYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFSAMISGYCEQRHTKEAYE 614

Query: 302  LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSAL 466
            L   ++   + P +   + L+S  C+ +++D    + +MM A     DEIT S L
Sbjct: 615  LFKRLVKKRVLPSSTACSRLISNLCKDEDLDKALMVHEMMVADGVIPDEITYSTL 669



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           I G+C    + EA  + +DM+ +G+ PD+ ++  L+ G C   +L K+ S     + +  
Sbjct: 355 IRGFCGEMKLDEAELVLSDMEEQGIAPDMYSYKSLITGYCNVGNLVKALSLHEDMISK-G 413

Query: 179 TKLESAVIGEVLEMQLKP--------------------DVVCYTVLIDKHCKMNNIQDAF 298
            K    ++G +++   K                     D V Y ++ID +CK  N + A 
Sbjct: 414 VKTTCIILGYLIQSLRKNGLAIEAIELFERFRNSGLFLDEVLYGMVIDAYCKQGNTEVAL 473

Query: 299 KLLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
           +L+ EM    L PD++ YT+L+ G CR  ++     +   M     + + +T + L  G+
Sbjct: 474 QLMDEMKGRRLAPDSLHYTSLIDGYCRNGDLGHAYKVFKDMVETGLEPNTVTYNILANGF 533


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Cucumis sativus]
          Length = 795

 Score =  142 bits (359), Expect = 4e-32
 Identities = 73/142 (51%), Positives = 96/142 (67%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYCK N + EA++L  DM++RG  PD+  +TVLL+G FKTSL+K +S        V  
Sbjct: 639  INGYCKINYLREAYELLCDMRNRGREPDIFVYTVLLDGGFKTSLQKCSS--------VEI 690

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
             L S++  E+ +M++ PDVV YTVLID +CKMNN+ DAF L  EM+D G++ D VTYTAL
Sbjct: 691  ALTSSIFNEMKDMKITPDVVYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTAL 750

Query: 362  LSGCCRLKNVDGTQTLVDMMTA 427
            LS CCR    +  QTL   MT+
Sbjct: 751  LSSCCRNGYKEKAQTLCYEMTS 772



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           I G+C    + EA  +F DM++ GV+PD  T+ VL+NG C K +L+K+ S  +  + +  
Sbjct: 293 IRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLSK-G 351

Query: 179 TKLESAVIGEVLE----MQLKPDVV----------------CYTVLIDKHCKMNNIQDAF 298
            K    ++  +L+    MQ+  +VV                 Y +++   C++  +++A 
Sbjct: 352 IKSNCVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLDNVVYNIVVHALCELGKLEEAI 411

Query: 299 KLLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
           +LL EM    +Q D + YT ++ G      +     + + +     + D IT S L  G+
Sbjct: 412 ELLEEMTSRQIQMDVMHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGF 471



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I   C+   M  A  LF+ +   G+IPD+IT+T+++NG  K +          ++RE   
Sbjct: 604  IASLCRVKNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKIN----------YLREAYE 653

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLID-------KHCKMNNIQDAFKLLHEMIDNGLQPD 340
                 ++ ++     +PD+  YTVL+D       + C    I     + +EM D  + PD
Sbjct: 654  -----LLCDMRNRGREPDIFVYTVLLDGGFKTSLQKCSSVEIALTSSIFNEMKDMKITPD 708

Query: 341  TVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSAL 466
             V YT L+ G C++ N++    L + M     +AD +T +AL
Sbjct: 709  VVYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTAL 750



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGV------IPDVITFTVLLNGCFKT-SLEKSNSDQNF 160
           INGYC ++    A++LF ++   G+      +  +++   + N  F+   + K     N 
Sbjct: 534 INGYCAASDTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMKQLPVMNV 593

Query: 161 FVREV-------------STKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
             +E+             + K+   +   ++   L PD++ YT++I+ +CK+N +++A++
Sbjct: 594 EAKEIVYNKVIASLCRVKNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKINYLREAYE 653

Query: 302 LLHEMIDNGLQPDTVTYTALLSG 370
           LL +M + G +PD   YT LL G
Sbjct: 654 LLCDMRNRGREPDIFVYTVLLDG 676


>gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus vulgaris]
          Length = 803

 Score =  142 bits (357), Expect = 6e-32
 Identities = 76/167 (45%), Positives = 110/167 (65%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYC+ NC+  A+ L  DMK RG+ PDVIT+TVLL+G  K +L +  S +    R  S 
Sbjct: 638  INGYCRMNCLQVAYDLLQDMKRRGIKPDVITYTVLLDGNLKANLRRCVSPRGKGKRTSSV 697

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S+ + ++ +M++ PDVVCYTVLID H K N+ Q+A  L  +MID+GL+P+TVTYTAL
Sbjct: 698  ---SSTLRDMEQMEINPDVVCYTVLIDGHMKTNDFQEAISLFDKMIDSGLEPNTVTYTAL 754

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
            +SG C   +V+    L++ M++     D   +SAL+ G  I+KA++V
Sbjct: 755  VSGLCNKGHVEKAVILLNEMSSKGMTPDVHIISALKRG--IIKARRV 799



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIP-DVITFTVLLNGCFKTSLEKS------------ 142
           +NGYC++N + +++++F  + ++G +  D   F +L   C     EK+            
Sbjct: 533 VNGYCEANLVKKSYEIFLKLSNQGNLANDASCFKLLTKLCLTGDTEKAVMLLERMLLSNV 592

Query: 143 NSDQNFFVREVSTKLESAVIGEVLEM-------QLKPDVVCYTVLIDKHCKMNNIQDAFK 301
                 F + +S   ++  +   L +          PDV+ YT++I+ +C+MN +Q A+ 
Sbjct: 593 KPSIKMFSKVLSALCQAGDMESALSLFNSFVLRGFTPDVIMYTIMINGYCRMNCLQVAYD 652

Query: 302 LLHEMIDNGLQPDTVTYTALLSG 370
           LL +M   G++PD +TYT LL G
Sbjct: 653 LLQDMKRRGIKPDVITYTVLLDG 675



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           I+GYCK + +L+A  L ++M SRG+  + +  + +L    K  +     DQ   ++E   
Sbjct: 327 IHGYCKGHNLLKALDLHDEMISRGLKSNCVIVSYILRCLGKIGMPLEVVDQFKELKESGM 386

Query: 182 KLESAVIGEVLEMQLKP--------------------DVVCYTVLIDKHCKMNNIQDAFK 301
            L+  V   V +   K                     DV  YT LI+ +C   ++ + F+
Sbjct: 387 FLDGVVYNIVFDALCKLGKVEDAIVMSEDMKSKGVALDVKHYTTLINGYCLQGDLVNGFR 446

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTA----PDNQADEITLSALR 469
           +  EM D G +PD VTY  L +G  R  +      L+D M +    P+    ++ +  L 
Sbjct: 447 VFKEMSDKGFKPDIVTYNVLATGLSRNGHACEALKLLDYMESQGVKPNTTTHKLIIEGLC 506

Query: 470 WGYRILKAK 496
              ++L+A+
Sbjct: 507 SAGKVLEAR 515


>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Cucumis sativus]
          Length = 920

 Score =  140 bits (354), Expect = 1e-31
 Identities = 71/136 (52%), Positives = 93/136 (68%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYCK N + EA++L  DM++RG  PD+  +TVLL+G FKTSL+K +S        V  
Sbjct: 639  INGYCKINYLREAYELLCDMRNRGREPDIFVYTVLLDGGFKTSLQKCSS--------VEI 690

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
             L S++  E+ +M++ PDVV YTVLID +CKMNN+ DAF L  EM+D G++ D VTYTAL
Sbjct: 691  ALTSSIFNEMKDMKITPDVVYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTAL 750

Query: 362  LSGCCRLKNVDGTQTL 409
            LS CCR    +  QTL
Sbjct: 751  LSSCCRNGYKEKAQTL 766



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           I G+C    + EA  +F DM++ GV+PD  T+ VL+NG C K +L+K+ S  +  + +  
Sbjct: 293 IRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLSK-G 351

Query: 179 TKLESAVIGEVLE----MQLKPDVV----------------CYTVLIDKHCKMNNIQDAF 298
            K    ++  +L+    MQ+  +VV                 Y +++   C++  +++A 
Sbjct: 352 IKSNCVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLDNVVYNIVVHALCELGKLEEAI 411

Query: 299 KLLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
           +LL EM    +Q D + YT ++ G      +     + + +     + D IT S L  G+
Sbjct: 412 ELLEEMTSRQIQMDVMHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGF 471



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I   C+   M  A  LF+ +   G+IPD+IT+T+++NG  K +          ++RE   
Sbjct: 604  IASLCRVKNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKIN----------YLREAYE 653

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLID-------KHCKMNNIQDAFKLLHEMIDNGLQPD 340
                 ++ ++     +PD+  YTVL+D       + C    I     + +EM D  + PD
Sbjct: 654  -----LLCDMRNRGREPDIFVYTVLLDGGFKTSLQKCSSVEIALTSSIFNEMKDMKITPD 708

Query: 341  TVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSAL 466
             V YT L+ G C++ N++    L + M     +AD +T +AL
Sbjct: 709  VVYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTAL 750



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGV------IPDVITFTVLLNGCFKT-SLEKSNSDQNF 160
           INGYC ++    A++LF ++   G+      +  +++   + N  F+   + K     N 
Sbjct: 534 INGYCAASDTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMKQLPVMNV 593

Query: 161 FVREV-------------STKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
             +E+             + K+   +   ++   L PD++ YT++I+ +CK+N +++A++
Sbjct: 594 EAKEIVYNKVIASLCRVKNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKINYLREAYE 653

Query: 302 LLHEMIDNGLQPDTVTYTALLSG 370
           LL +M + G +PD   YT LL G
Sbjct: 654 LLCDMRNRGREPDIFVYTVLLDG 676


>ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 829

 Score =  140 bits (353), Expect = 2e-31
 Identities = 78/167 (46%), Positives = 102/167 (61%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            +NGYC+ N + EA  LF+DMK RG+ PDVIT+TV+L+G  K       S        V  
Sbjct: 648  LNGYCRVNRLQEAIYLFDDMKKRGISPDVITYTVMLDGHSKNLKRDRLSSDTSRNDRVRR 707

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S    E+  M+L  DV+CYTVLID HCK +NI DA  L  EMID GL+PD+VTYTAL
Sbjct: 708  DTGSVFWSEMNGMELTADVICYTVLIDSHCKSDNIDDAIHLFTEMIDRGLEPDSVTYTAL 767

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
            + G C+  +V+  + LV+ M     Q D  T++AL  G  I+KAKK+
Sbjct: 768  ICGYCKQGHVEMAKELVNDMWRKGIQPDSHTIAALHHG--IIKAKKL 812



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQ-------NF 160
           INGYC +  + +A    + M++RG+  + +  +++L    K    +   DQ         
Sbjct: 337 INGYCTTGNISKALAFHDKMETRGIKSNCVIVSLILQCLCKNGKARDAVDQFSSFKKKGI 396

Query: 161 FVREVST-----------KLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ EV+            + E A  ++ E+ + ++ PD+V YT LI+ +C    I DA  
Sbjct: 397 FLDEVAYNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDAMG 456

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMM 421
           L  EM + GL+PD +TY  L  G  R   V     L+D M
Sbjct: 457 LFDEMKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHM 496



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           I+  CK     EA +L ++MK + + PD++ +T L+NG C    +  +            
Sbjct: 407 IDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDA------------ 454

Query: 179 TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTA 358
                 +  E+ E  LKPD++ Y VL     +   +++A  LL  M    L P TVT+  
Sbjct: 455 ----MGLFDEMKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHMKGQKLMPTTVTHNV 510

Query: 359 LLSGCC 376
           ++ G C
Sbjct: 511 IIEGLC 516


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score =  140 bits (353), Expect = 2e-31
 Identities = 74/166 (44%), Positives = 105/166 (63%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I  YC+ NC+ EA  LF+DMK RG+ PD++TFTVLL+G  K  ++K  S  N        
Sbjct: 658  ITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDI 717

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
                A+  E+ + ++KPDV+ YTVLID +CK++++ DA  +  EMI+ GL+PD +TYTAL
Sbjct: 718  FDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTAL 777

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKK 499
            LSGCC+  +VD    L+D M+      D  T+SAL  G  ILK ++
Sbjct: 778  LSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHG--ILKTRQ 821



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
 Frame = +2

Query: 11  YCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQ-------NFFVR 169
           +CK+  +L+A+   N+M S+GV  + +    +L+   +  +     DQ         F+ 
Sbjct: 348 FCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLD 407

Query: 170 EVST-----------KLESAV--IGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLH 310
            VS            KLE A+  + E+   Q+  DV+ YT LI+ +C   N+ DAFK+  
Sbjct: 408 GVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFE 467

Query: 311 EMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTA----PDNQADEITLSALRWGY 478
           EM +NG++ D VTY  L+SG CR         L+D M      P++    + + +L  G 
Sbjct: 468 EMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGG 527

Query: 479 RILKAKKV 502
           ++ +A+ V
Sbjct: 528 KVKEAEAV 535



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGC-----------FKTSLEKSNS 148
           INGYCK+N    A +LF  +  +G +     + +L N C            +T L  +  
Sbjct: 551 INGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDNDGILMLLETMLNLNVE 610

Query: 149 DQNFFVREVSTKLESA-------VIGEVLEMQLK----PDVVCYTVLIDKHCKMNNIQDA 295
              F   ++ T L  A           V +M LK    PD++ YT++I  +C+MN +++A
Sbjct: 611 PSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEA 670

Query: 296 FKLLHEMIDNGLQPDTVTYTALLSG 370
             L H+M   G++PD VT+T LL G
Sbjct: 671 VDLFHDMKQRGIKPDLVTFTVLLDG 695



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/136 (23%), Positives = 66/136 (48%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           INGYC    +++AF++F +M+  G+  DV+T+ VL++G  +  L     +          
Sbjct: 450 INGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALN---------- 499

Query: 182 KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
                ++  +   +LKP+ + Y V+++  C    +++A  + + + D  L      Y A+
Sbjct: 500 -----LLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLD----NYFAM 550

Query: 362 LSGCCRLKNVDGTQTL 409
           ++G C+  +  G   L
Sbjct: 551 INGYCKANHTAGAAKL 566


>gb|EOX92409.1| Pentatricopeptide repeat-containing protein, putative isoform 3
            [Theobroma cacao]
          Length = 784

 Score =  134 bits (338), Expect = 1e-29
 Identities = 71/152 (46%), Positives = 96/152 (63%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYCK   + +A  LFN+MK RG+ PDVIT+TVLLN   K +L   ++         + 
Sbjct: 619  INGYCKVKLLQKALDLFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTI 678

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
             + S    E+  M ++PDVVCYTVLID+ CK NN+QDA ++  EMID GL+PDTVTYTAL
Sbjct: 679  MVASPFWSEMKHMGVEPDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTAL 738

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITL 457
            +SG  +   +D   TLV+ + +   Q D  T+
Sbjct: 739  ISGYFKGGYIDKAVTLVNELLSKGIQPDTHTM 770



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I  +C++  +  A  LFN M  +G+ PD++T+T+++NG  K  L +   D          
Sbjct: 584  IGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALD---------- 633

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMN---------------NIQDAFKLLHEM 316
                 +   + E  +KPDV+ YTVL++ H KMN                I  A     EM
Sbjct: 634  -----LFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTIMVASPFWSEM 688

Query: 317  IDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
               G++PD V YT L+   C+  N+     + D M     + D +T +AL  GY
Sbjct: 689  KHMGVEPDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTALISGY 742



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLE-------KSNSDQNF 160
           I GYCK   +L+A  + ++M S+G+  + +  T +L    +  L+       K   D   
Sbjct: 308 IRGYCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGI 367

Query: 161 FVREV-----------STKLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ EV             ++E A  ++ E+   Q+ PDV+ YT LI+ +C+   ++DA+ 
Sbjct: 368 FLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWN 427

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEI 451
           L  EM +NG +PD V Y+ L  G  R  +      L++ M A   + D +
Sbjct: 428 LFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTV 477



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG----------------CFKTSL 133
           I   CK   + EAF +F +M+   V P+   +T  + G                C K  +
Sbjct: 203 IKALCKKGSLEEAFNVFREMEEAEVRPNAFAYTTYIEGLCMHGRTELGYEVLKVCRKAKV 262

Query: 134 EKSNSDQNFFVREVSTKLESAVIGEVL----EMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
                  +  +R  S +++  V  +VL       + PDV  Y  LI  +CK  NI  A  
Sbjct: 263 PLDPFAYSVVIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCKCGNILKALD 322

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRL----KNVDGTQTLVDMMTAPDNQADEITLSALR 469
           + HEM+  G++ + V  T++L   C++    K V+  +   D+    D     +   AL 
Sbjct: 323 IHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALC 382

Query: 470 WGYRILKAKKV 502
            G ++ +AKK+
Sbjct: 383 KGGQVEEAKKL 393



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
 Frame = +2

Query: 14  CKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVSTKLES 193
           CK   + EA +L ++MK + + PDVI +T L+NG  +                   K+E 
Sbjct: 382 CKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQG-----------------KVED 424

Query: 194 A--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTALLS 367
           A  +  E+     KPD+V Y+VL     +  + Q A  LL+ M   GL+ DTV +  ++ 
Sbjct: 425 AWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTVIHNMIIK 484

Query: 368 GCCRLKNVDGTQTLVDMM 421
           G C    V   +  +D +
Sbjct: 485 GLCMGDKVKEAENFLDSL 502



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKS----------NS 148
           ++GY ++    EAF+LF  +  +G +    + + LL+  C K   +K+          N+
Sbjct: 514 VDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLLKIMFSLNA 573

Query: 149 DQN---------FFVREVSTKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           +            F +  +  +   +   +++  L PD+V YT++I+ +CK+  +Q A  
Sbjct: 574 EPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALD 633

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCR-----LKNVDGTQ 403
           L + M + G++PD +TYT LL+   +     L N D TQ
Sbjct: 634 LFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQ 672


>gb|EOX92408.1| Pentatricopeptide repeat-containing protein, putative isoform 2
            [Theobroma cacao]
          Length = 818

 Score =  134 bits (338), Expect = 1e-29
 Identities = 71/152 (46%), Positives = 96/152 (63%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYCK   + +A  LFN+MK RG+ PDVIT+TVLLN   K +L   ++         + 
Sbjct: 645  INGYCKVKLLQKALDLFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTI 704

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
             + S    E+  M ++PDVVCYTVLID+ CK NN+QDA ++  EMID GL+PDTVTYTAL
Sbjct: 705  MVASPFWSEMKHMGVEPDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTAL 764

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITL 457
            +SG  +   +D   TLV+ + +   Q D  T+
Sbjct: 765  ISGYFKGGYIDKAVTLVNELLSKGIQPDTHTM 796



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I  +C++  +  A  LFN M  +G+ PD++T+T+++NG  K  L +   D          
Sbjct: 610  IGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALD---------- 659

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMN---------------NIQDAFKLLHEM 316
                 +   + E  +KPDV+ YTVL++ H KMN                I  A     EM
Sbjct: 660  -----LFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTIMVASPFWSEM 714

Query: 317  IDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
               G++PD V YT L+   C+  N+     + D M     + D +T +AL  GY
Sbjct: 715  KHMGVEPDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTALISGY 768



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLE-------KSNSDQNF 160
           I GYCK   +L+A  + ++M S+G+  + +  T +L    +  L+       K   D   
Sbjct: 334 IRGYCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGI 393

Query: 161 FVREV-----------STKLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ EV             ++E A  ++ E+   Q+ PDV+ YT LI+ +C+   ++DA+ 
Sbjct: 394 FLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWN 453

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEI 451
           L  EM +NG +PD V Y+ L  G  R  +      L++ M A   + D +
Sbjct: 454 LFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTV 503



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG----------------CFKTSL 133
           I   CK   + EAF +F +M+   V P+   +T  + G                C K  +
Sbjct: 229 IKALCKKGSLEEAFNVFREMEEAEVRPNAFAYTTYIEGLCMHGRTELGYEVLKVCRKAKV 288

Query: 134 EKSNSDQNFFVREVSTKLESAVIGEVL----EMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
                  +  +R  S +++  V  +VL       + PDV  Y  LI  +CK  NI  A  
Sbjct: 289 PLDPFAYSVVIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCKCGNILKALD 348

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRL----KNVDGTQTLVDMMTAPDNQADEITLSALR 469
           + HEM+  G++ + V  T++L   C++    K V+  +   D+    D     +   AL 
Sbjct: 349 IHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALC 408

Query: 470 WGYRILKAKKV 502
            G ++ +AKK+
Sbjct: 409 KGGQVEEAKKL 419



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
 Frame = +2

Query: 14  CKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVSTKLES 193
           CK   + EA +L ++MK + + PDVI +T L+NG  +                   K+E 
Sbjct: 408 CKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQG-----------------KVED 450

Query: 194 A--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTALLS 367
           A  +  E+     KPD+V Y+VL     +  + Q A  LL+ M   GL+ DTV +  ++ 
Sbjct: 451 AWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTVIHNMIIK 510

Query: 368 GCCRLKNVDGTQTLVDMM 421
           G C    V   +  +D +
Sbjct: 511 GLCMGDKVKEAENFLDSL 528



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKS----------NS 148
            ++GY ++    EAF+LF  +  +G +    + + LL+  C K   +K+          N+
Sbjct: 540  VDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLLKIMFSLNA 599

Query: 149  DQN---------FFVREVSTKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
            +            F +  +  +   +   +++  L PD+V YT++I+ +CK+  +Q A  
Sbjct: 600  EPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALD 659

Query: 302  LLHEMIDNGLQPDTVTYTALLSGCCR-----LKNVDGTQ 403
            L + M + G++PD +TYT LL+   +     L N D TQ
Sbjct: 660  LFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQ 698


>gb|EOX92407.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao]
          Length = 792

 Score =  134 bits (338), Expect = 1e-29
 Identities = 71/152 (46%), Positives = 96/152 (63%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYCK   + +A  LFN+MK RG+ PDVIT+TVLLN   K +L   ++         + 
Sbjct: 619  INGYCKVKLLQKALDLFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTI 678

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
             + S    E+  M ++PDVVCYTVLID+ CK NN+QDA ++  EMID GL+PDTVTYTAL
Sbjct: 679  MVASPFWSEMKHMGVEPDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTAL 738

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITL 457
            +SG  +   +D   TLV+ + +   Q D  T+
Sbjct: 739  ISGYFKGGYIDKAVTLVNELLSKGIQPDTHTM 770



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I  +C++  +  A  LFN M  +G+ PD++T+T+++NG  K  L +   D          
Sbjct: 584  IGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALD---------- 633

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMN---------------NIQDAFKLLHEM 316
                 +   + E  +KPDV+ YTVL++ H KMN                I  A     EM
Sbjct: 634  -----LFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTIMVASPFWSEM 688

Query: 317  IDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
               G++PD V YT L+   C+  N+     + D M     + D +T +AL  GY
Sbjct: 689  KHMGVEPDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTALISGY 742



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLE-------KSNSDQNF 160
           I GYCK   +L+A  + ++M S+G+  + +  T +L    +  L+       K   D   
Sbjct: 308 IRGYCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGI 367

Query: 161 FVREV-----------STKLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ EV             ++E A  ++ E+   Q+ PDV+ YT LI+ +C+   ++DA+ 
Sbjct: 368 FLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWN 427

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEI 451
           L  EM +NG +PD V Y+ L  G  R  +      L++ M A   + D +
Sbjct: 428 LFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTV 477



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG----------------CFKTSL 133
           I   CK   + EAF +F +M+   V P+   +T  + G                C K  +
Sbjct: 203 IKALCKKGSLEEAFNVFREMEEAEVRPNAFAYTTYIEGLCMHGRTELGYEVLKVCRKAKV 262

Query: 134 EKSNSDQNFFVREVSTKLESAVIGEVL----EMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
                  +  +R  S +++  V  +VL       + PDV  Y  LI  +CK  NI  A  
Sbjct: 263 PLDPFAYSVVIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCKCGNILKALD 322

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRL----KNVDGTQTLVDMMTAPDNQADEITLSALR 469
           + HEM+  G++ + V  T++L   C++    K V+  +   D+    D     +   AL 
Sbjct: 323 IHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALC 382

Query: 470 WGYRILKAKKV 502
            G ++ +AKK+
Sbjct: 383 KGGQVEEAKKL 393



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
 Frame = +2

Query: 14  CKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVSTKLES 193
           CK   + EA +L ++MK + + PDVI +T L+NG  +                   K+E 
Sbjct: 382 CKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQG-----------------KVED 424

Query: 194 A--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTALLS 367
           A  +  E+     KPD+V Y+VL     +  + Q A  LL+ M   GL+ DTV +  ++ 
Sbjct: 425 AWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTVIHNMIIK 484

Query: 368 GCCRLKNVDGTQTLVDMM 421
           G C    V   +  +D +
Sbjct: 485 GLCMGDKVKEAENFLDSL 502



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKS----------NS 148
           ++GY ++    EAF+LF  +  +G +    + + LL+  C K   +K+          N+
Sbjct: 514 VDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLLKIMFSLNA 573

Query: 149 DQN---------FFVREVSTKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           +            F +  +  +   +   +++  L PD+V YT++I+ +CK+  +Q A  
Sbjct: 574 EPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALD 633

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCR-----LKNVDGTQ 403
           L + M + G++PD +TYT LL+   +     L N D TQ
Sbjct: 634 LFNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQ 672


>ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X1 [Citrus sinensis]
            gi|568854934|ref|XP_006481071.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X2 [Citrus sinensis]
            gi|568854936|ref|XP_006481072.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X3 [Citrus sinensis]
            gi|568854938|ref|XP_006481073.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X4 [Citrus sinensis]
            gi|568854940|ref|XP_006481074.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X5 [Citrus sinensis]
          Length = 831

 Score =  131 bits (329), Expect = 1e-28
 Identities = 69/158 (43%), Positives = 96/158 (60%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I+GYCK NC+ EA  +FNDMK RG+ PDV+T+TVL +   K +L+ S+S  +    +   
Sbjct: 663  IHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDV 722

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S    E+ EM ++PDV+ YTVLI K C   N++D   + +E+ D GL+PDTVTYTAL
Sbjct: 723  VDASVFWNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTAL 782

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWG 475
            L G     ++D    LVD M+    Q D+ T S+L  G
Sbjct: 783  LCGYLAKGDLDRAIALVDEMSVKGIQGDDYTKSSLERG 820



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I   C++  M +A  +F+ +  +G+ P +IT+T++++G  K +  +   D          
Sbjct: 628  IGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARD---------- 677

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMN---------------NIQDAFKLLHEM 316
                 V  ++ +  + PDVV YTVL D H K+N               ++ DA    +EM
Sbjct: 678  -----VFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDASVFWNEM 732

Query: 317  IDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
             + G++PD ++YT L++  C  +N++   T+ + ++    + D +T +AL  GY
Sbjct: 733  KEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTALLCGY 786



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTS-----------LEKSNS 148
           I G+C  N + +A  +   M+ +GV+PDV  ++ L++G  K             +     
Sbjct: 317 IRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKINKALPLHHEMTSKGI 376

Query: 149 DQNFFVREVSTK------LESAVIGEVLE---MQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
             N  V  V  K      + SA I + LE   M    D VCY +++D  CK+  ++ A  
Sbjct: 377 KTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDIIVDSLCKLGEVEKAMI 436

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSAL 466
           L  EM D  + PD V YT ++ G C    +     L   M    ++ D IT + L
Sbjct: 437 LFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFKEMKEMGHKPDTITYNIL 491



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           ++  CK   + +A  LF +MK R ++PDV+ +T ++ G CF+  L  +            
Sbjct: 422 VDSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD---------- 471

Query: 179 TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTA 358
                 +  E+ EM  KPD + Y +L     +   +Q AF LL+ M  +GL+P+ VT+  
Sbjct: 472 ------LFKEMKEMGHKPDTITYNILAGAFAQYGAVQKAFDLLNYMKRHGLEPNFVTHNM 525

Query: 359 LLSGCCRLKNVDGTQTLVD 415
           ++ G C    V+  +  +D
Sbjct: 526 IIEGLCMGGRVEEAEAFLD 544



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGC------------FKTSL---- 133
            INGYCK+    EAFQLF  + ++GV+    +   LL               FKT +    
Sbjct: 558  INGYCKTGHTKEAFQLFMRLSNQGVLVKKSSCNKLLTNLLILRDNNNALKLFKTMITLNA 617

Query: 134  --EKSNSDQNFFVREVSTKLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
               KS  D+       + ++E A  V   +++  L P ++ YT++I  +CK+N +++A  
Sbjct: 618  EPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARD 677

Query: 302  LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQAD 445
            + ++M   G+ PD VTYT L     ++ N+ G+ +  D +   ++  D
Sbjct: 678  VFNDMKQRGITPDVVTYTVLFDAHSKI-NLKGSSSSPDALQCKEDVVD 724



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSN-------SDQNF 160
           I+GYCK   + +A  L ++M S+G+  +    +V+L G  +  +  +         D  F
Sbjct: 352 ISGYCKFGKINKALPLHHEMTSKGIKTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGF 411

Query: 161 FVREVST-----------KLESAVI--GEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ +V             ++E A+I   E+ + Q+ PDVV YT +I  +C    + DA  
Sbjct: 412 FLDKVCYDIIVDSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD 471

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMM----TAPDNQADEITLSALR 469
           L  EM + G +PDT+TY  L     +   V     L++ M      P+     + +  L 
Sbjct: 472 LFKEMKEMGHKPDTITYNILAGAFAQYGAVQKAFDLLNYMKRHGLEPNFVTHNMIIEGLC 531

Query: 470 WGYRILKAK 496
            G R+ +A+
Sbjct: 532 MGGRVEEAE 540


>ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citrus clementina]
            gi|557531495|gb|ESR42678.1| hypothetical protein
            CICLE_v10011094mg [Citrus clementina]
          Length = 810

 Score =  131 bits (329), Expect = 1e-28
 Identities = 69/158 (43%), Positives = 96/158 (60%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I+GYCK NC+ EA  +FNDMK RG+ PDV+T+TVL +   K +L+ S+S  +    +   
Sbjct: 642  IHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDV 701

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S    E+ EM ++PDV+ YTVLI K C   N++D   + +E+ D GL+PDTVTYTAL
Sbjct: 702  VDASVFWNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTAL 761

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWG 475
            L G     ++D    LVD M+    Q D+ T S+L  G
Sbjct: 762  LCGYLAKGDLDRAIALVDEMSVKGIQGDDYTKSSLERG 799



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I   C++  M +A  +F+ +  +G+ P +IT+T++++G  K +  +   D          
Sbjct: 607  IGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARD---------- 656

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMN---------------NIQDAFKLLHEM 316
                 V  ++ +  + PDVV YTVL D H K+N               ++ DA    +EM
Sbjct: 657  -----VFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDASVFWNEM 711

Query: 317  IDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
             + G++PD ++YT L++  C  +N++   T+ + ++    + D +T +AL  GY
Sbjct: 712  KEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTALLCGY 765



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           ++  CK   + +A  LF +MK R ++PDV+ +T ++ G CF+  L  +            
Sbjct: 401 VDSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD---------- 450

Query: 179 TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTA 358
                 +  E+ EM  KPD++ Y +L     +   +Q AF LL+ M  +GL+P+ VT+  
Sbjct: 451 ------LFKEMKEMGHKPDIITYNILAGAFAQYGAVQKAFDLLNYMKRHGLEPNFVTHNM 504

Query: 359 LLSGCCRLKNVDGTQTLVD 415
           ++ G C    V+  +  +D
Sbjct: 505 IIEGLCMGGRVEEAEAFLD 523



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTS-----------LEKSNS 148
           I G+C  N + +A  +   M+ +GV+PDV  ++ L++G  K             +     
Sbjct: 296 IRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKINKALPLHHEMTSKGI 355

Query: 149 DQNFFVREVSTK------LESAVIGEVLE---MQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
             N  V  V  K      + SA I + LE   M    D VCY V++D  CK+  ++ A  
Sbjct: 356 KTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDVIVDSLCKLGEVEKAMI 415

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSAL 466
           L  EM D  + PD V YT ++ G C    +     L   M    ++ D IT + L
Sbjct: 416 LFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFKEMKEMGHKPDIITYNIL 470



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGC------------FKTSL---- 133
            INGYCK+    EAFQLF  + ++GV+    +   LL               FKT +    
Sbjct: 537  INGYCKTGHTKEAFQLFMRLSNQGVLVKKSSCNKLLTNLLILRDNNNALKLFKTMITLNA 596

Query: 134  --EKSNSDQNFFVREVSTKLESA--VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
               KS  D+       + ++E A  V   +++  L P ++ YT++I  +CK+N +++A  
Sbjct: 597  EPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARD 656

Query: 302  LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQAD 445
            + ++M   G+ PD VTYT L     ++ N+ G+ +  D +   ++  D
Sbjct: 657  VFNDMKQRGITPDVVTYTVLFDAHSKI-NLKGSSSSPDALQCKEDVVD 703



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSN-------SDQNF 160
           I+GYCK   + +A  L ++M S+G+  +    +V+L G  +  +  +         D  F
Sbjct: 331 ISGYCKFGKINKALPLHHEMTSKGIKTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGF 390

Query: 161 FVREVST-----------KLESAVI--GEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
           F+ +V             ++E A+I   E+ + Q+ PDVV YT +I  +C    + DA  
Sbjct: 391 FLDKVCYDVIVDSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD 450

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMM----TAPDNQADEITLSALR 469
           L  EM + G +PD +TY  L     +   V     L++ M      P+     + +  L 
Sbjct: 451 LFKEMKEMGHKPDIITYNILAGAFAQYGAVQKAFDLLNYMKRHGLEPNFVTHNMIIEGLC 510

Query: 470 WGYRILKAK 496
            G R+ +A+
Sbjct: 511 MGGRVEEAE 519



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
           I   CK   M EA ++F +M+  GV P+   ++  + G C    L+           E+ 
Sbjct: 226 IKALCKKGSMQEAVEVFLEMEKAGVTPNAFAYSTCIEGLCMNGMLDLGY--------ELL 277

Query: 179 TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTA 358
            K E A         +      YTV+I   C  N ++ A  +L  M   G+ PD   Y+A
Sbjct: 278 LKWEEA--------DIPLSAFAYTVVIRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSA 329

Query: 359 LLSGCCRLKNVDGTQTLVDMMTA 427
           L+SG C+   ++    L   MT+
Sbjct: 330 LISGYCKFGKINKALPLHHEMTS 352


>gb|EXB51209.1| hypothetical protein L484_019200 [Morus notabilis]
          Length = 798

 Score =  125 bits (313), Expect = 8e-27
 Identities = 68/166 (40%), Positives = 102/166 (61%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            INGYC+ NC+ EAF L   MKS+G+ PD++T+TVLL+  FK+     ++  N   ++ ++
Sbjct: 624  INGYCRENCLQEAFDLLRCMKSKGIEPDIVTYTVLLDALFKSD---HHAHLNATKQKETS 680

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S+V+ E+ EM++ PDV+  TVLID + K+   + A  L  EM+  G++PD V YTAL
Sbjct: 681  MHISSVLTEMQEMKITPDVILCTVLIDGYSKLEKFEVALALFKEMVRRGIEPDVVAYTAL 740

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKK 499
            LS C    +VDG  +L+D M++     D   L+AL    RIL  K+
Sbjct: 741  LSSCYDRGDVDGAASLIDEMSSKGIHPDACMLAALE--NRILNLKQ 784



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGC------------FKTSLEKSN 145
           I+GYCK+N   +A+ L   +  +G+     +F  LL               F+T L    
Sbjct: 519 ISGYCKANYTRKAYALLLRLLKQGIPVGETSFLKLLCKLCVEGQNDRAVFLFETMLAMKM 578

Query: 146 SDQNFFVREVSTKLESA--------VIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFK 301
                    + + L  A        +   ++E  L PDV+ Y  +I+ +C+ N +Q+AF 
Sbjct: 579 KPGKVMCNRLVSSLSRAGNVKKARQIFDSLVERGLTPDVIGYPTMINGYCRENCLQEAFD 638

Query: 302 LLHEMIDNGLQPDTVTYTALL 364
           LL  M   G++PD VTYT LL
Sbjct: 639 LLRCMKSKGIEPDIVTYTVLL 659



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
           I GYCK   +L A  L  DM SRG+  + I    +L    +  +     +Q   V+ +  
Sbjct: 313 IEGYCKGYNLLRALALHADMVSRGMRTNCIIINSILKCLCRMRMFDEAVNQFEEVKGMGI 372

Query: 182 KLESAVIGEVL-----------------EMQLKPDVVC---YTVLIDKHCKMNNIQDAFK 301
            L+      V                  EM++K  VV    YT LI  +C   NI DA  
Sbjct: 373 HLDGVSYNLVAHALCELGRVEQAVELLQEMKIKGMVVKVMHYTTLIKGYCLKGNIVDALD 432

Query: 302 LLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTA----PDNQADEITLSAL 466
           ++ EM + GL+PD VTY  L +G  R         L+D M A    P++   E+ +  L
Sbjct: 433 VVEEMNEKGLKPDIVTYNVLAAGFSRNGLASEAFGLLDYMNAQGVKPESSTYEVIIENL 491


>ref|XP_006408619.1| hypothetical protein EUTSA_v10001906mg [Eutrema salsugineum]
            gi|557109775|gb|ESQ50072.1| hypothetical protein
            EUTSA_v10001906mg [Eutrema salsugineum]
          Length = 827

 Score =  117 bits (294), Expect = 1e-24
 Identities = 64/158 (40%), Positives = 98/158 (62%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I+ YC+ N + +A  LF DMK RG+ PDV+ +TVLL+   K  L+  + +  +   EV  
Sbjct: 658  IHTYCRLNELQKAEFLFEDMKQRGIKPDVVIYTVLLDSHQK--LDPDHHETGYVRGEVQK 715

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
            +  S +  E+    ++PDVVCYTVLID+ CK+ N+++A +L  +MID+GL+PD VT TAL
Sbjct: 716  RKASEIWRELEAAGIEPDVVCYTVLIDRQCKIQNLKNATRLFDQMIDSGLKPDMVTCTAL 775

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWG 475
            +S  CR   +D    LV  ++  D  + E+ + A+R G
Sbjct: 776  ISSYCRKGYMDKAVRLVTQLSRKDISSAELLMLAVRRG 813



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVS 178
            I  +C+ N   EA  +F+ M SRG+IPD+ T+T++++  C    L+K+      F+ E  
Sbjct: 623  IGKFCELNNAREAQLVFDTMVSRGLIPDLFTYTIMIHTYCRLNELQKAE-----FLFE-- 675

Query: 179  TKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMN-------------NIQDAFKLLHEMI 319
                     ++ +  +KPDVV YTVL+D H K++               + A ++  E+ 
Sbjct: 676  ---------DMKQRGIKPDVVIYTVLLDSHQKLDPDHHETGYVRGEVQKRKASEIWRELE 726

Query: 320  DNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
              G++PD V YT L+   C+++N+     L D M     + D +T +AL   Y
Sbjct: 727  AAGIEPDVVCYTVLIDRQCKIQNLKNATRLFDQMIDSGLKPDMVTCTALISSY 779



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGV-IPDVITFTVL-----LNGCFKTSLE-KSNSDQNF 160
           I+ +CK+  + +A    + M  +G+ I  VI  ++L     +  CF+   + K   D   
Sbjct: 329 IDRHCKNMDLPKALGFVDAMLEKGLKINCVIVSSILQCYCKMGKCFEALQQFKEYKDMKI 388

Query: 161 FVREVSTKLESAV--IGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQ 334
              E+   L  A+    E  +M +  D VCY V  +   K++ +++A +LL EM++ G+ 
Sbjct: 389 NTNEL---LLGALQKFKEFKDMNIFLDKVCYNVAFEALSKLDRVEEAVELLQEMMNKGMV 445

Query: 335 PDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWG 475
           PD + YT L+ G C          L+D M A     D IT + L  G
Sbjct: 446 PDVINYTTLIDGYCLHGKFVDALDLIDKMRANGTAPDVITYNVLAGG 492



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = +2

Query: 35  EAFQLFNDMKSRGVIPDVITFTVLLNG-CFKTSLEKSNSDQNFFVREVSTKLESAVIGEV 211
           EA +L  +M ++G++PDVI +T L++G C              FV  +       +I ++
Sbjct: 431 EAVELLQEMMNKGMVPDVINYTTLIDGYCLHGK----------FVDALD------LIDKM 474

Query: 212 LEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTALLSGCCRLKNV 391
                 PDV+ Y VL     +  + ++AF++   M D GL+P+ VT+  ++ G C  + +
Sbjct: 475 RANGTAPDVITYNVLAGGLARNGHAKEAFEIYKCMKDEGLEPNAVTHNVIIEGLCFARKI 534

Query: 392 DGTQTLVDMM--TAPDNQA 442
           +  +   + +    PDN A
Sbjct: 535 EDAENFFESLEDKCPDNYA 553



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
 Frame = +2

Query: 11  YCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVS---- 178
           YCK     EA Q F + K       + T  +LL    K    K   D N F+ +V     
Sbjct: 367 YCKMGKCFEALQQFKEYKDM----KINTNELLLGALQKF---KEFKDMNIFLDKVCYNVA 419

Query: 179 -------TKLESAV--IGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGL 331
                   ++E AV  + E++   + PDV+ YT LID +C      DA  L+ +M  NG 
Sbjct: 420 FEALSKLDRVEEAVELLQEMMNKGMVPDVINYTTLIDGYCLHGKFVDALDLIDKMRANGT 479

Query: 332 QPDTVTYTALLSGCCR 379
            PD +TY  L  G  R
Sbjct: 480 APDVITYNVLAGGLAR 495


>ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491298|gb|AES72501.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  117 bits (294), Expect = 1e-24
 Identities = 67/167 (40%), Positives = 95/167 (56%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I  YC  NC+ EA  LF DMKSRG+ PDVIT+TVLL+G  K +  K +        + + 
Sbjct: 627  IKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAP 686

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S +  ++ + ++ PDVV YTVLID H K++N +DA +L +E++  GL+PD VTYTAL
Sbjct: 687  YDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTAL 746

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGYRILKAKKV 502
             SG     N +   TL + M++            L    RILK +K+
Sbjct: 747  FSGLLNSGNSEIAVTLYNEMSSKG------MTPPLHINQRILKVRKL 787



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRG----------VIPDVITFTVLLNGCFKTSLEKSNSD 151
           ++GYC+++ + ++++LF+++ +RG           +  V+   VL   C K +++++ S 
Sbjct: 548 VSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSL 607

Query: 152 QNFFVREVSTKLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGL 331
            +FF+    T                PDVV YT++I  +C MN +Q+A  L  +M   G+
Sbjct: 608 FDFFLGRGFT----------------PDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGI 651

Query: 332 QPDTVTYTALLSG 370
           +PD +TYT LL G
Sbjct: 652 KPDVITYTVLLDG 664



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFF-VREVS 178
           I GYCK++ +++A  L+ DM  +G+  + +  + +L+ CF    E S     F  V++  
Sbjct: 342 ICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILH-CFAEMGEDSRVVDTFKEVKQSG 400

Query: 179 TKLE--------------------SAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAF 298
             L+                    + ++ ++  M +  D+  YT  I  +C       A+
Sbjct: 401 VFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAY 460

Query: 299 KLLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEITLSALRWGY 478
            +  EM + G +PD V Y  L +G C  ++V     L++ M +   + +  T   +  G+
Sbjct: 461 IIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGF 520


>ref|XP_006293706.1| hypothetical protein CARUB_v10022664mg [Capsella rubella]
            gi|482562414|gb|EOA26604.1| hypothetical protein
            CARUB_v10022664mg [Capsella rubella]
          Length = 794

 Score =  116 bits (290), Expect = 4e-24
 Identities = 61/144 (42%), Positives = 89/144 (61%)
 Frame = +2

Query: 2    INGYCKSNCMLEAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVST 181
            I+ YC+ + + +A  LF DMK RG+ PDV+T+TVLL+   K  L+  + +  +   E   
Sbjct: 627  IHTYCRRSELQKADDLFEDMKQRGIKPDVVTYTVLLDRYLK--LDAEHHETGYVQEEKQR 684

Query: 182  KLESAVIGEVLEMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTAL 361
               S V+ +     ++ DVVCYTVLID+ CK++N+++A KL   MID+GL+PD V YT L
Sbjct: 685  SKASEVLRKFTAAGIELDVVCYTVLIDRQCKIDNLENAEKLFDRMIDSGLEPDMVAYTTL 744

Query: 362  LSGCCRLKNVDGTQTLVDMMTAPD 433
            LSG CR   +D   TLV  ++  D
Sbjct: 745  LSGYCRKGYIDKAVTLVTELSEKD 768



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
 Frame = +2

Query: 2   INGYCKSNCMLEAFQLFNDMKSRG------VIPDVITFTVLLNGCFKTSLEKSN--SDQN 157
           I+ YCK+  + E  +  + M  +G      ++  V+     ++ C + +LEK    SD N
Sbjct: 319 IDRYCKNLNLPEVLRFLDKMLGKGLRINCGIVSSVLQCYCQMDMCLE-ALEKFKEFSDMN 377

Query: 158 FFVREVSTKLESAVIG-------------EVLEMQLKPDVVCYTVLIDKHCKMNNIQDAF 298
            F+  V   +    +G             E+++  + PDV+ YT LI+ +C    + DA 
Sbjct: 378 IFLDRVCYNVAFDALGKLGRVEEAVELFREMMDKGMVPDVINYTTLINGYCLEGKVVDAL 437

Query: 299 KLLHEMIDNGLQPDTVTYTALLSGCCRLKNVDGTQTLVDMMTAPDNQADEIT 454
            L+ EM  NG+ PD +TY  L+SG  R  + +    + D M A   + D +T
Sbjct: 438 DLIDEMRGNGISPDLITYNVLVSGLARNGHEEEALEIYDRMKAEGLKPDAVT 489



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/148 (26%), Positives = 70/148 (47%)
 Frame = +2

Query: 35  EAFQLFNDMKSRGVIPDVITFTVLLNGCFKTSLEKSNSDQNFFVREVSTKLESAVIGEVL 214
           EA +LF +M  +G++PDVI +T L+NG               +  E        +I E+ 
Sbjct: 400 EAVELFREMMDKGMVPDVINYTTLING---------------YCLEGKVVDALDLIDEMR 444

Query: 215 EMQLKPDVVCYTVLIDKHCKMNNIQDAFKLLHEMIDNGLQPDTVTYTALLSGCCRLKNVD 394
              + PD++ Y VL+    +  + ++A ++   M   GL+PD VT+  ++ G C  + V 
Sbjct: 445 GNGISPDLITYNVLVSGLARNGHEEEALEIYDRMKAEGLKPDAVTHNVIIEGLCFARKVK 504

Query: 395 GTQTLVDMMTAPDNQADEITLSALRWGY 478
             +   D   + D++  E   S ++ GY
Sbjct: 505 EAE---DFWKSLDDKCHENDASLVK-GY 528