BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00043870
         (496 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     276   2e-72
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   276   3e-72
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...   271   9e-71
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc...   271   9e-71
gb|AAD17357.1| contains similarity to retrovirus-related polypro...   270   1e-70
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   270   1e-70
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]         269   3e-70
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   265   5e-69
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   263   2e-68
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776...   261   7e-68
gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposo...   248   5e-64
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   230   2e-58
gb|EMS67284.1| Spastin [Triticum urartu]                              226   3e-57
gb|ABF97003.1| retrotransposon protein, putative, Ty1-copia subc...   222   4e-56
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc...   221   8e-56
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   215   4e-54
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     215   4e-54
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   215   6e-54
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       210   2e-52
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     206   2e-51

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  276 bits (706), Expect = 2e-72
 Identities = 131/165 (79%), Positives = 146/165 (88%)
 Frame = -2

Query: 495  QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
            QN LGKTIK +RSDRGGEY+SQEF NHLK+ GIV QLTPPGTPQ NGVS+RRNRTLLDMV
Sbjct: 552  QNHLGKTIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMV 611

Query: 315  RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
            RSMMS+++LP SFWGYALETAA TLNR PS +VEKTPYEIWTG+ P  SF++IWGCEAYV
Sbjct: 612  RSMMSQSDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYV 671

Query: 135  KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
            K+L SDKL PKSDKC  VGYPK+TKGYYFY RE+ KVFVAR+GVF
Sbjct: 672  KRLQSDKLTPKSDKCFVVGYPKETKGYYFYNREQAKVFVARHGVF 716


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  276 bits (705), Expect = 3e-72
 Identities = 127/165 (76%), Positives = 144/165 (87%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QNQ GK+IKA+RSDRGGEYLSQ F +HL+E GIVSQLTPPGTPQ NGVS+RRNRTLLDMV
Sbjct: 196 QNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDMV 255

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS  +LP  FWGYALET+AF LNR PS +VEKTPYEIWTGKVP  SF++IWGCE+Y 
Sbjct: 256 RSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCESYA 315

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           K+L++DKL PKSDKC FVGYPK+TKGYYFY+  +NKVFV RNG F
Sbjct: 316 KRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNGAF 360


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  271 bits (692), Expect = 9e-71
 Identities = 131/167 (78%), Positives = 143/167 (85%), Gaps = 2/167 (1%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QN L KTIK +RSDRGGEY S EF NHLKE GIV QLTPPGTPQLNGVSKRRNRTLLDMV
Sbjct: 101 QNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMV 160

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS+ +LP SFWGYALETA FT+NR PS +++KTPYEIWTGK P  SF++IWGCE YV
Sbjct: 161 RSMMSQTDLPLSFWGYALETAVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYV 220

Query: 135 KKLVSDKLHP--KSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           K+L SDKL P  KSDKC FVGYPK+TKGYYFY REE KVFVAR+GVF
Sbjct: 221 KRLQSDKLTPKSKSDKCFFVGYPKETKGYYFYNREEGKVFVARHGVF 267


>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score =  271 bits (692), Expect = 9e-71
 Identities = 131/167 (78%), Positives = 143/167 (85%), Gaps = 2/167 (1%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QN L KTIK +RSDRGGEY S EF NHLKE GIV QLTPPGTPQLNGVSKRRNRTLLDMV
Sbjct: 101 QNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMV 160

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS+ +LP SFWGYALETA FT+NR PS +++KTPYEIWTGK P  SF++IWGCE YV
Sbjct: 161 RSMMSQTDLPLSFWGYALETAVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYV 220

Query: 135 KKLVSDKLHP--KSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           K+L SDKL P  KSDKC FVGYPK+TKGYYFY REE KVFVAR+GVF
Sbjct: 221 KRLQSDKLTPKSKSDKCFFVGYPKETKGYYFYNREEGKVFVARHGVF 267


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score =  270 bits (691), Expect = 1e-70
 Identities = 127/165 (76%), Positives = 145/165 (87%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           +N+LGK+IKA+RSDRGGEYLSQ F +HL+E GIVSQLTPPGTPQ NGVS+RRN+TLLDMV
Sbjct: 228 KNKLGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQGNGVSERRNQTLLDMV 287

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS  +LP SFWGYALET  F LNR PS +VEKTPYEIWTGKVP  SF++I GCEAYV
Sbjct: 288 RSMMSHTDLPSSFWGYALETYVFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKILGCEAYV 347

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           K+L++DKL PKSDKC FVGYPK+TKGYYFY+  +NKVFVARNG F
Sbjct: 348 KRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVARNGAF 392


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  270 bits (691), Expect = 1e-70
 Identities = 130/165 (78%), Positives = 141/165 (85%)
 Frame = -2

Query: 495  QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
            QN LGKTIK +RSDRGGEYLS EF NHLKE GIV QLTPPGTPQ NGVS+ RNRTLLDMV
Sbjct: 528  QNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSEWRNRTLLDMV 587

Query: 315  RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
            RSMMS+ NL  SFWGYALET AFTLN  PS +V+KTPYEIWTGK P  SF++IWGCE YV
Sbjct: 588  RSMMSQTNLLLSFWGYALETTAFTLNSVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYV 647

Query: 135  KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
            K+L SDKL PKSDKC FVGYPK+TKGYYFY +EE KVFVAR+GVF
Sbjct: 648  KRLQSDKLTPKSDKCFFVGYPKETKGYYFYNQEEGKVFVARHGVF 692


>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score =  269 bits (687), Expect = 3e-70
 Identities = 129/165 (78%), Positives = 141/165 (85%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QN LGKTIK +RSDRGGEYLS EF NHLKE GIV QLTPPGTPQ N VS+RRNRTLLDMV
Sbjct: 346 QNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNRVSERRNRTLLDMV 405

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           +SMMS+ +LP  FWGYALETAAFTLNR PS +V+KT YEIWTGK P  SF++IWGCE YV
Sbjct: 406 QSMMSQTDLPLCFWGYALETAAFTLNRVPSKSVDKTSYEIWTGKRPSLSFLKIWGCEVYV 465

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           K+L SDKL PKSDKC FVGYPK+TKGYYFY REE KVFVAR+ VF
Sbjct: 466 KRLQSDKLTPKSDKCFFVGYPKETKGYYFYNREEGKVFVARHSVF 510


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  265 bits (677), Expect = 5e-69
 Identities = 128/165 (77%), Positives = 140/165 (84%)
 Frame = -2

Query: 495  QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
            QN L KTIK +RSD GGEYLS EF NHLK  GIV QLTPPGTPQ NGVS+RRNRTLL+MV
Sbjct: 1028 QNHLRKTIKYLRSDHGGEYLSLEFGNHLKGCGIVPQLTPPGTPQWNGVSERRNRTLLNMV 1087

Query: 315  RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
            RSMMS+ NL  SFWGYALETAAFTLNR PS +V+KTPYEIWTGK P  SF++IWGCE YV
Sbjct: 1088 RSMMSQTNLLLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYV 1147

Query: 135  KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
            K+L SDKL PKS+KC FVGYPK+TKGYY Y REE KVFVAR+GVF
Sbjct: 1148 KRLQSDKLTPKSNKCFFVGYPKETKGYYLYNREEGKVFVARHGVF 1192


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  263 bits (671), Expect = 2e-68
 Identities = 125/159 (78%), Positives = 137/159 (86%)
 Frame = -2

Query: 477 TIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSK 298
           TIK +RSDRGGEYLS EF NHLKE GIV QLTPPGTPQ NGVS+RRNRTLLD+VRSMMS+
Sbjct: 354 TIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDIVRSMMSQ 413

Query: 297 ANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYVKKLVSD 118
            +LP SFW YALE AAFTLN+ PS +V KTPYEIWTGK P  SF++IWGCE YVK+L SD
Sbjct: 414 TDLPLSFWAYALEKAAFTLNKVPSKSVNKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSD 473

Query: 117 KLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           KL PKSDKC FVGYPK+TKGYYFY REE KVFVAR+GVF
Sbjct: 474 KLTPKSDKCFFVGYPKETKGYYFYNREEGKVFVARHGVF 512


>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
           italica]
          Length = 1686

 Score =  261 bits (667), Expect = 7e-68
 Identities = 122/158 (77%), Positives = 137/158 (86%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           +NQ GK IKA+RSDRGGEYLS EF NHLK  GIV QLTPPGTPQ NGVS+RRNRTLLDMV
Sbjct: 1   ENQRGKKIKALRSDRGGEYLSHEFSNHLKSCGIVPQLTPPGTPQRNGVSERRNRTLLDMV 60

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS+++LP SFWGYALETAAFTLNR PS +V KTPYEIWTGKVP  SF++IWGCE +V
Sbjct: 61  RSMMSQSDLPLSFWGYALETAAFTLNRVPSKSVVKTPYEIWTGKVPSLSFLKIWGCEVFV 120

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVF 22
           K+L SDK+ PKSDKC+FVGYPK+T GY+FY R E KVF
Sbjct: 121 KRLQSDKITPKSDKCIFVGYPKETLGYFFYNRSEGKVF 158


>gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Triticum
            urartu]
          Length = 1808

 Score =  248 bits (634), Expect = 5e-64
 Identities = 117/165 (70%), Positives = 135/165 (81%)
 Frame = -2

Query: 495  QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
            +N   K IK +RSDRGGEYLS EF  HLK+ GIVSQLTPPGTPQ NGVS+RRN TLLDMV
Sbjct: 1144 KNHRNKKIKFLRSDRGGEYLSYEFVLHLKQCGIVSQLTPPGTPQRNGVSERRNHTLLDMV 1203

Query: 315  RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
            RSMMS  +LP SFWGYALETAAFTLNRAPS +VE TPYE+W GK  K SF+++WGC+AYV
Sbjct: 1204 RSMMSLTDLPLSFWGYALETAAFTLNRAPSKSVETTPYELWFGKKHKLSFLKVWGCDAYV 1263

Query: 135  KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
            KKL  DKL P S+KC+F+GYPK+T GY FY+R E  +FVA+NG F
Sbjct: 1264 KKLQPDKLEPTSEKCVFIGYPKETVGYTFYHRSEGNIFVAKNGSF 1308


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  230 bits (586), Expect = 2e-58
 Identities = 116/165 (70%), Positives = 132/165 (80%), Gaps = 3/165 (1%)
 Frame = -2

Query: 486 LGKTIKAI---RSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           LGK  KA    +S+R  E L   + +   E GIV QLTPPGTPQ NGVS+RRNRTLLDMV
Sbjct: 226 LGKMTKAPFTGQSERASELLGLVYTD---ECGIVPQLTPPGTPQWNGVSERRNRTLLDMV 282

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS+ +LP SFWGYALETAAFTLNR PS +++KTPYEIWTGK P  SF++IWGCE YV
Sbjct: 283 RSMMSQTDLPLSFWGYALETAAFTLNRVPSKSLDKTPYEIWTGKRPSLSFLKIWGCEVYV 342

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           K+L SDKL PKSDK  FVGYPK+TKGYYFY REE+KVFVAR+ VF
Sbjct: 343 KRLQSDKLTPKSDKYFFVGYPKETKGYYFYNREEDKVFVARHDVF 387


>gb|EMS67284.1| Spastin [Triticum urartu]
          Length = 1541

 Score =  226 bits (575), Expect = 3e-57
 Identities = 106/149 (71%), Positives = 123/149 (82%)
 Frame = -2

Query: 447 GEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSKANLPKSFWGY 268
           GEYLS EF  +LK+ GIVS LTPPGTPQ NGVS+RRNRTLLDMVRSMMS  +LP SFWGY
Sbjct: 369 GEYLSYEFGLYLKQCGIVSHLTPPGTPQRNGVSERRNRTLLDMVRSMMSLTDLPLSFWGY 428

Query: 267 ALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYVKKLVSDKLHPKSDKCL 88
           ALETAAFTLNRAPS +VE TPYE W  K PK  F+++WGC+AYV+KL  DKL PKS+KC+
Sbjct: 429 ALETAAFTLNRAPSKSVETTPYEPWFSKKPKLPFLKVWGCDAYVQKLQPDKLKPKSEKCV 488

Query: 87  FVGYPKQTKGYYFYYREENKVFVARNGVF 1
           F+GYPK+T GY FY+R   K+FVA+NG F
Sbjct: 489 FIGYPKETIGYTFYHRSGGKIFVAKNGSF 517


>gb|ABF97003.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 404

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/164 (68%), Positives = 122/164 (74%)
 Frame = -2

Query: 492 NQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMVR 313
           N   KTIK +RSDRGGEYLS EF NHLKE GIV QLTPPGTPQ NGVS+RRN TLLDMVR
Sbjct: 211 NSKTKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNPTLLDMVR 270

Query: 312 SMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYVK 133
           SMMS+ +LP SFWGYA ET AFTLNR PS +V+KTPYEIWTGK P  SF++IWGCE    
Sbjct: 271 SMMSQTDLPLSFWGYAPETVAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEI--- 327

Query: 132 KLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
                            GYPK+TKGYYFY REE KVFVAR+GVF
Sbjct: 328 ------------NASLWGYPKETKGYYFYNREEGKVFVARHGVF 359


>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 810

 Score =  221 bits (563), Expect = 8e-56
 Identities = 110/165 (66%), Positives = 125/165 (75%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QN LGKTIK +RSDRGG+YLS EF NHLKE  IV QLT PGTPQ NGVS+RRNRTLLDM+
Sbjct: 261 QNHLGKTIKYLRSDRGGKYLSLEFGNHLKECRIVPQLTLPGTPQWNGVSERRNRTLLDML 320

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
             + S+               AFT+N+ PS +V+K PYEIWTGK P  SF++IWGCE YV
Sbjct: 321 LGLRSR-------------DTAFTINKVPSKSVDKIPYEIWTGKRPSLSFLKIWGCEVYV 367

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
           K+L SDKL PKSDKC FVGY K+TKGYYFY REE KVFVAR+GVF
Sbjct: 368 KRLQSDKLTPKSDKCFFVGYHKETKGYYFYNREEGKVFVARHGVF 412


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  215 bits (548), Expect = 4e-54
 Identities = 109/165 (66%), Positives = 121/165 (73%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QN LGKTIK +RSDRGGEYLS E+ NHLKE GIV QLTPPGTPQ N VS+RRNR LLDMV
Sbjct: 517 QNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAVSERRNRILLDMV 576

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS+ ++P SFWGYALETAAFTLNR PS +V+KTPYEIWTGK P  SF++IW CE   
Sbjct: 577 RSMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWCCE--- 633

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
                                 +TKGYYFY REE KVFVAR+GVF
Sbjct: 634 ----------------------ETKGYYFYNREEGKVFVARHGVF 656


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  215 bits (548), Expect = 4e-54
 Identities = 109/165 (66%), Positives = 121/165 (73%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QN LGKTIK +RSDRGGEYLS E+ NHLKE GIV QLTPPGTPQ N VS+RRNR LLDMV
Sbjct: 430 QNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAVSERRNRILLDMV 489

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS+ ++P SFWGYALETAAFTLNR PS +V+KTPYEIWTGK P  SF++IW CE   
Sbjct: 490 RSMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWCCE--- 546

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
                                 +TKGYYFY REE KVFVAR+GVF
Sbjct: 547 ----------------------ETKGYYFYNREEGKVFVARHGVF 569


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  215 bits (547), Expect = 6e-54
 Identities = 106/139 (76%), Positives = 114/139 (82%)
 Frame = -2

Query: 495  QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
            QN LGKTIK +RSDRGGEYLS EF NH KE GIV QLTPPGTPQ N VS+RRNRTLLDMV
Sbjct: 604  QNHLGKTIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAVSERRNRTLLDMV 663

Query: 315  RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
            RSMMS+ NLP SF GYALET AFTLN  PS +V+KTPYEIWTG  P  SF++IWG E YV
Sbjct: 664  RSMMSQTNLPLSFSGYALETTAFTLNWVPSKSVDKTPYEIWTGNRPSLSFLKIWGYEVYV 723

Query: 135  KKLVSDKLHPKSDKCLFVG 79
            K+L SDKL PKSDKC FVG
Sbjct: 724  KRLQSDKLTPKSDKCFFVG 742


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  210 bits (534), Expect = 2e-52
 Identities = 99/165 (60%), Positives = 123/165 (74%)
 Frame = -2

Query: 495  QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
            +N++GKTIK +RSDRGGEY+  +F+++L E GI SQL+ P TPQ NGVS+RRNRTLLDMV
Sbjct: 557  ENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQNGVSERRNRTLLDMV 616

Query: 315  RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
            RSMMS A LP SFWGYALETA   LN  PS +V +TPYE+W G+     + RIWGC A+V
Sbjct: 617  RSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGRKSSLRYFRIWGCPAHV 676

Query: 135  KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
                  KL P+S  CLFVGYPK+++G  FY+ +ENKVFV+ N  F
Sbjct: 677  LVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTNATF 721


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  206 bits (525), Expect = 2e-51
 Identities = 108/165 (65%), Positives = 117/165 (70%)
 Frame = -2

Query: 495 QNQLGKTIKAIRSDRGGEYLSQEFENHLKEHGIVSQLTPPGTPQLNGVSKRRNRTLLDMV 316
           QN LGKTIK +RSDRGGEYLS EF NH KE GIV QLTPPGTPQ N VS+RRNRTLLDMV
Sbjct: 531 QNHLGKTIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAVSERRNRTLLDMV 590

Query: 315 RSMMSKANLPKSFWGYALETAAFTLNRAPSNAVEKTPYEIWTGKVPKFSFMRIWGCEAYV 136
           RSMMS+ NLP SF GYALET AFTLN  PS +V+KTPYEIWTG  P  SF++IWG E   
Sbjct: 591 RSMMSQTNLPLSFSGYALETTAFTLNWVPSKSVDKTPYEIWTGNRPSLSFLKIWGYE--- 647

Query: 135 KKLVSDKLHPKSDKCLFVGYPKQTKGYYFYYREENKVFVARNGVF 1
                                 +TKGYYFY REE KVFVAR+GVF
Sbjct: 648 ----------------------ETKGYYFYNREEGKVFVARHGVF 670