BLASTX nr result

ID: Achyranthes22_contig00043249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00043249
         (409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat...    67   2e-09
gb|EMJ25653.1| hypothetical protein PRUPE_ppa022157mg [Prunus pe...    59   5e-07

>ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like isoform X1 [Solanum
           tuberosum] gi|565377884|ref|XP_006355397.1| PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like isoform X2 [Solanum
           tuberosum]
          Length = 709

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 50/119 (42%), Positives = 61/119 (51%), Gaps = 18/119 (15%)
 Frame = +2

Query: 107 MRGFSSITSRAS-PAFKNLAQNHPNQTKPLPQKIPCDLPSNTPQIAAQN-----LRGKSF 268
           MRGFSS+ SRAS PAF NL++ + N   P+  K     PSN   +A  +         S 
Sbjct: 1   MRGFSSVASRASSPAFTNLSKQNQNSLTPITPK-----PSNLHSVATTSNPITQQSSPSK 55

Query: 269 SNPHFS------------NSRLNSIDHETLSQILLRKDRNSLLHHELKAGRVILNQQFV 409
             P F+            N R + IDH+  SQIL RKD   LL+HE KA RV LNQQ V
Sbjct: 56  PKPSFNWNSNTSIAAKKVNFRASVIDHKYFSQILARKDWYLLLNHEYKAKRVTLNQQEV 114


>gb|EMJ25653.1| hypothetical protein PRUPE_ppa022157mg [Prunus persica]
          Length = 604

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 47/121 (38%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
 Frame = +2

Query: 104 EMRGFSSITSRASPAFKNLAQN--HPNQTKPLPQKIPCDLPSNT-----------PQIAA 244
           +MR  SS+ SRASPA +NL +     + +K  P+K+    PS+            P    
Sbjct: 4   DMRWLSSLASRASPALRNLPEQAQRESSSKNKPRKVLNQTPSDNVGAPLKGNSPKPNFEP 63

Query: 245 QNLRGKSFS-NP-----HFSNSRLNSIDHETLSQILLRKDRNSLLHHELKAGRVILNQQF 406
           QN    S S NP     H        IDH  ++QIL RKD   LL HELKA R+ LN QF
Sbjct: 64  QNPNLVSISTNPISAVNHKFRIDNKRIDHLYIAQILSRKDWFLLLDHELKAKRIFLNPQF 123

Query: 407 V 409
           V
Sbjct: 124 V 124


Top