BLASTX nr result
ID: Achyranthes22_contig00043217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00043217
(340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250... 109 6e-29
ref|XP_004959410.1| PREDICTED: uncharacterized protein LOC101774... 108 7e-29
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854... 107 1e-28
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 110 1e-28
ref|XP_004517047.1| PREDICTED: uncharacterized protein LOC101507... 108 4e-28
emb|CAH67115.1| H0502G05.6 [Oryza sativa Indica Group] 108 5e-28
emb|CAE03017.3| OSJNBa0091D06.2 [Oryza sativa Japonica Group] 108 5e-28
ref|XP_006365576.1| PREDICTED: uncharacterized protein LOC102595... 110 6e-28
gb|ABA94261.1| retrotransposon protein, putative, unclassified [... 101 1e-27
ref|XP_004489081.1| PREDICTED: uncharacterized protein LOC101488... 102 1e-27
ref|XP_004305746.1| PREDICTED: uncharacterized protein LOC101308... 101 2e-27
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [... 100 4e-27
gb|ABA98724.1| retrotransposon protein, putative, unclassified [... 105 5e-27
ref|NP_001059757.1| Os07g0510800 [Oryza sativa Japonica Group] g... 102 5e-27
dbj|BAG97774.1| unnamed protein product [Oryza sativa Japonica G... 100 5e-27
emb|CAE02919.3| OSJNBb0108J11.11 [Oryza sativa Japonica Group] 99 9e-27
gb|AAL68643.1|AF458767_1 polyprotein [Oryza sativa Japonica Group] 99 9e-27
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g... 99 1e-26
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 102 1e-26
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 102 2e-26
>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
Length = 1406
Score = 109 bits (273), Expect(2) = 6e-29
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = -1
Query: 259 LRN*EVFLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVL 80
L++ VFLG+TGYYR F+ YASI PLTDLL+K +F W+ + T AF+ LK A+++APVL
Sbjct: 159 LKHLRVFLGLTGYYRWFIHSYASIAAPLTDLLRKDAFNWTPEVTVAFDALKSAMVAAPVL 218
Query: 79 ALPDFEHIFEVETDVSKTGIGAVLMQ 2
LPDF F +ETD S GIGAVLMQ
Sbjct: 219 RLPDFNETFVIETDASNVGIGAVLMQ 244
Score = 43.5 bits (101), Expect(2) = 6e-29
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIST-----DSRKIKAVVKWPIPTSVKELRSFFG 234
+EYLGH +S D +K+ A++KWPIP ++K LR F G
Sbjct: 128 IEYLGHIVSAGGVRADPQKLDAMMKWPIPCTLKHLRVFLG 167
>ref|XP_004959410.1| PREDICTED: uncharacterized protein LOC101774267 [Setaria italica]
Length = 841
Score = 108 bits (269), Expect(2) = 7e-29
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLG+TGYYRKF++ Y I +PLT+LLKK F WSS A QAF++LK A+++APVL LPDF
Sbjct: 737 FLGLTGYYRKFIKNYGIIARPLTNLLKKKQFSWSSVAQQAFQQLKTAMLNAPVLGLPDFS 796
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
F VETD S G+GAVLMQ
Sbjct: 797 AQFVVETDASDFGVGAVLMQ 816
Score = 44.7 bits (104), Expect(2) = 7e-29
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
+EYLGH IS TD K +A+ KWP+P +V ELR F G
Sbjct: 700 LEYLGHIISHQGVATDPSKTEAMAKWPVPITVTELRGFLG 739
>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
Length = 2807
Score = 107 bits (268), Expect(2) = 1e-28
Identities = 49/80 (61%), Positives = 61/80 (76%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLG+TGYYR+F+ YASI PLTDLL+K +F W+ + T AF+ LK A+++APVL LPDF
Sbjct: 784 FLGLTGYYRRFIHGYASIAAPLTDLLRKDAFNWTPEVTVAFDALKSAMVAAPVLRLPDFN 843
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
F +ETD S GIGAVLMQ
Sbjct: 844 KTFVIETDASNVGIGAVLMQ 863
Score = 44.3 bits (103), Expect(2) = 1e-28
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIST-----DSRKIKAVVKWPIPTSVKELRSFFG 234
+EYLGH +S D +K+ A++KWPIP ++K LR F G
Sbjct: 747 IEYLGHIVSAGGVRADPQKLDAMMKWPIPRTLKHLRGFLG 786
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 110 bits (274), Expect(2) = 1e-28
Identities = 53/86 (61%), Positives = 68/86 (79%)
Frame = -1
Query: 259 LRN*EVFLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVL 80
LR FLG+TGYYRKFV YA I +PLT+ LKK +F+WS+ AT+AF++LK A++SAPVL
Sbjct: 918 LRELRGFLGLTGYYRKFVANYAHIARPLTEQLKKDNFKWSATATEAFKQLKSAMVSAPVL 977
Query: 79 ALPDFEHIFEVETDVSKTGIGAVLMQ 2
A+P+F+ F VETD S G+GAVLMQ
Sbjct: 978 AMPNFQLTFVVETDASGYGMGAVLMQ 1003
Score = 42.0 bits (97), Expect(2) = 1e-28
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIST-----DSRKIKAVVKWPIPTSVKELRSFFG 234
V YLGH IS D+ K+KAV++W +P +++ELR F G
Sbjct: 887 VAYLGHVISEGGVAMDTEKVKAVLEWEVPKNLRELRGFLG 926
>ref|XP_004517047.1| PREDICTED: uncharacterized protein LOC101507913, partial [Cicer
arietinum]
Length = 763
Score = 108 bits (271), Expect(2) = 4e-28
Identities = 50/80 (62%), Positives = 63/80 (78%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLG+TGYYR+FV+ Y I KPLTDLLKK +F W+ +AT AF+ LK+A++S P+LA+PDF
Sbjct: 538 FLGLTGYYRRFVQNYGRITKPLTDLLKKDNFVWNEEATTAFQTLKQAMVSLPLLAVPDFS 597
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
F VETD S G+GAVLMQ
Sbjct: 598 KTFIVETDASSKGLGAVLMQ 617
Score = 41.6 bits (96), Expect(2) = 4e-28
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
+EYLGH IS D K++AV WP+P +K LR F G
Sbjct: 501 LEYLGHVISEAGVAADQTKVEAVKSWPVPKDLKSLRGFLG 540
>emb|CAH67115.1| H0502G05.6 [Oryza sativa Indica Group]
Length = 898
Score = 108 bits (270), Expect(2) = 5e-28
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKG-SFEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+ GYYRKFV+ + I KPLT+LL+KG F W+S+ AF+ LK+AL+SAPVLALPDF
Sbjct: 795 FLGLAGYYRKFVKGFGVISKPLTNLLRKGVPFHWNSETESAFQHLKQALVSAPVLALPDF 854
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
+ +F VETD S+TGIGAVL Q
Sbjct: 855 QKVFTVETDASETGIGAVLSQ 875
Score = 41.6 bits (96), Expect(2) = 5e-28
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = -3
Query: 332 YLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
YLGH IS TD KI+ VV W +P SVK+LR F G
Sbjct: 760 YLGHTISAAGVHTDKNKIQEVVDWKVPISVKKLRGFLG 797
>emb|CAE03017.3| OSJNBa0091D06.2 [Oryza sativa Japonica Group]
Length = 877
Score = 108 bits (270), Expect(2) = 5e-28
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKG-SFEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+ GYYRKFV+ + I KPLT+LL+KG F W+S+ AF+ LK+AL+SAPVLALPDF
Sbjct: 774 FLGLAGYYRKFVKGFGVISKPLTNLLRKGVPFHWNSETESAFQHLKQALVSAPVLALPDF 833
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
+ +F VETD S+TGIGAVL Q
Sbjct: 834 QKVFTVETDASETGIGAVLSQ 854
Score = 41.6 bits (96), Expect(2) = 5e-28
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = -3
Query: 332 YLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
YLGH IS TD KI+ VV W +P SVK+LR F G
Sbjct: 739 YLGHTISAAGVHTDKNKIQEVVDWKVPISVKKLRGFLG 776
>ref|XP_006365576.1| PREDICTED: uncharacterized protein LOC102595311 [Solanum tuberosum]
Length = 1907
Score = 110 bits (276), Expect(2) = 6e-28
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLG+TGYYRKFVR Y I +PLT LLKK +F W+ +A AFE LKEA+++ PVLALP+F+
Sbjct: 849 FLGLTGYYRKFVRDYGKIARPLTQLLKKDAFHWNKEAQLAFESLKEAMVTLPVLALPNFK 908
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
+F VETD S GIGAVLMQ
Sbjct: 909 KVFVVETDASGLGIGAVLMQ 928
Score = 38.9 bits (89), Expect(2) = 6e-28
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIST-----DSRKIKAVVKWPIPTSVKELRSFFG 234
+EYLGH IS D KI +++ WP P VK LR F G
Sbjct: 812 LEYLGHIISASGVSADPAKITSMINWPNPKDVKGLRGFLG 851
>gb|ABA94261.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1369
Score = 101 bits (251), Expect(2) = 1e-27
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGS-FEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+ GYYRKFVR Y + KPLT+LLKKG + W+S QAF+ +K AL++APVLA+PDF
Sbjct: 772 FLGLAGYYRKFVRNYGILSKPLTNLLKKGQLYLWTSATDQAFQAIKHALVTAPVLAMPDF 831
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
F VETD S G+GAVLMQ
Sbjct: 832 SIPFVVETDASDKGMGAVLMQ 852
Score = 47.8 bits (112), Expect(2) = 1e-27
Identities = 24/38 (63%), Positives = 26/38 (68%), Gaps = 5/38 (13%)
Frame = -3
Query: 332 YLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
YLGH IS TDS KI V WP+P+SVKELRSF G
Sbjct: 737 YLGHIISPNGVSTDSDKIAVVQSWPVPSSVKELRSFLG 774
>ref|XP_004489081.1| PREDICTED: uncharacterized protein LOC101488814 [Cicer arietinum]
Length = 1248
Score = 102 bits (255), Expect(2) = 1e-27
Identities = 47/80 (58%), Positives = 63/80 (78%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLG+TGYYR+F++ YA I PLT+LLKK +F W+++A AFE+LK+A+ +APVLALP+F
Sbjct: 842 FLGLTGYYRRFIKAYAHIAAPLTELLKKDNFHWNTEAETAFEKLKQAMTNAPVLALPNFS 901
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
F +ETD S G+GAVL Q
Sbjct: 902 QSFILETDASGVGVGAVLGQ 921
Score = 45.8 bits (107), Expect(2) = 1e-27
Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
V+YLGH +S ++ K+KAV++WPIP++VK+LR F G
Sbjct: 805 VDYLGHTVSGKGVSMENTKVKAVLEWPIPSNVKQLRGFLG 844
>ref|XP_004305746.1| PREDICTED: uncharacterized protein LOC101308702 [Fragaria vesca
subsp. vesca]
Length = 1163
Score = 101 bits (252), Expect(2) = 2e-27
Identities = 51/80 (63%), Positives = 58/80 (72%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLG+ GYYRK+VR + I KPLTDLLKK +F+WS AT AFE LK AL AP+LA+PDF
Sbjct: 767 FLGLAGYYRKYVRGFGIIAKPLTDLLKKDAFKWSDVATVAFEALKNALTYAPMLAIPDFS 826
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
F VE D S GIGAVL Q
Sbjct: 827 KEFVVECDASDLGIGAVLSQ 846
Score = 46.6 bits (109), Expect(2) = 2e-27
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIST-----DSRKIKAVVKWPIPTSVKELRSFFG 234
VEYLGH +S D KI ++ KWPIPTS+K LR F G
Sbjct: 730 VEYLGHIVSAEGVAVDPAKISSIQKWPIPTSLKALRGFLG 769
>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 100 bits (250), Expect(2) = 4e-27
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLG TGYYR+FV+ Y I +PL D LKK SF+W+ AT AF+ LK A+ + PVL LPDF+
Sbjct: 948 FLGFTGYYRRFVKNYGQIARPLRDQLKKNSFDWNEAATSAFQALKAAVSALPVLVLPDFQ 1007
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
F VETD S GIGAVL Q
Sbjct: 1008 QEFTVETDASGMGIGAVLSQ 1027
Score = 46.2 bits (108), Expect(2) = 4e-27
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 5/41 (12%)
Frame = -3
Query: 338 VEYLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFGY 231
+ YLGH IS TD K++A+++WP+P SV ELR F G+
Sbjct: 911 ISYLGHIISEQGVATDPEKVEAMLQWPLPKSVTELRGFLGF 951
>gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1269
Score = 105 bits (262), Expect(2) = 5e-27
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGS-FEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+ GYYRKFV + I +PLTDLLKK F W+S+ +F+ LKEAL+SAPVLALPDF
Sbjct: 690 FLGLAGYYRKFVHSFGIISRPLTDLLKKNVVFVWTSEHQASFDALKEALVSAPVLALPDF 749
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
+FE+ETD S G+GAVLMQ
Sbjct: 750 SKVFEIETDASDKGVGAVLMQ 770
Score = 41.2 bits (95), Expect(2) = 5e-27
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Frame = -3
Query: 332 YLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
YLGH IS TDS+ I+AV W +P +VKE+R F G
Sbjct: 655 YLGHVISAEGVATDSKNIQAVHNWAVPCNVKEVRGFLG 692
>ref|NP_001059757.1| Os07g0510800 [Oryza sativa Japonica Group]
gi|113611293|dbj|BAF21671.1| Os07g0510800 [Oryza sativa
Japonica Group]
Length = 517
Score = 102 bits (253), Expect(2) = 5e-27
Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGS-FEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+ GYYRKFVR + I +PLTDLLKK F W+ QAFE LK AL SAPVLA+PDF
Sbjct: 211 FLGLAGYYRKFVRHFGVISRPLTDLLKKNVVFVWTISHQQAFEALKSALTSAPVLAIPDF 270
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
FE+ETD S G+GAVLMQ
Sbjct: 271 SKPFEIETDASDKGVGAVLMQ 291
Score = 44.7 bits (104), Expect(2) = 5e-27
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 5/38 (13%)
Frame = -3
Query: 332 YLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
YLGH IS TD + I AV +WP+PT+VKE+R F G
Sbjct: 176 YLGHVISHAGVSTDPKNILAVQRWPVPTNVKEVRGFLG 213
>dbj|BAG97774.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 268
Score = 100 bits (248), Expect(2) = 5e-27
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGS-FEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+ GYY+KFVR Y + KPLT+LL+KG + W+++ QAF+ LK ALI+APVL++PDF
Sbjct: 134 FLGLAGYYQKFVRHYGLLSKPLTNLLRKGQLYIWTAETEQAFQALKHALITAPVLSMPDF 193
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
F VETD S GIGAVLMQ
Sbjct: 194 NEPFIVETDASDKGIGAVLMQ 214
Score = 46.6 bits (109), Expect(2) = 5e-27
Identities = 23/38 (60%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Frame = -3
Query: 332 YLGHF-----ISTDSRKIKAVVKWPIPTSVKELRSFFG 234
YLGH +STD KI+AV WP PTSVKELR F G
Sbjct: 99 YLGHIMSPNGVSTDEDKIQAVSNWPTPTSVKELRGFLG 136
>emb|CAE02919.3| OSJNBb0108J11.11 [Oryza sativa Japonica Group]
Length = 815
Score = 99.4 bits (246), Expect(2) = 9e-27
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGS-FEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+TGYYRKFV Y + KPLT+LL+KG + W+S+ AF+ LK+ALI+APVLA+P+F
Sbjct: 389 FLGLTGYYRKFVCHYGILSKPLTNLLRKGQLYIWTSETEAAFQALKQALITAPVLAMPNF 448
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
F VETD S GIGAVLMQ
Sbjct: 449 SEPFIVETDASDKGIGAVLMQ 469
Score = 46.6 bits (109), Expect(2) = 9e-27
Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFI-----STDSRKIKAVVKWPIPTSVKELRSFFG 234
+ YLGH I STD KI+ V WP+P SVKELRSF G
Sbjct: 352 LSYLGHIITPNGVSTDDDKIRVVQNWPVPGSVKELRSFLG 391
>gb|AAL68643.1|AF458767_1 polyprotein [Oryza sativa Japonica Group]
Length = 775
Score = 99.4 bits (246), Expect(2) = 9e-27
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGS-FEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+TGYYRKFV Y + KPLT+LL+KG + W+S+ AF+ LK+ALI+APVLA+P+F
Sbjct: 389 FLGLTGYYRKFVCHYGILSKPLTNLLRKGQLYIWTSETEAAFQALKQALITAPVLAMPNF 448
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
F VETD S GIGAVLMQ
Sbjct: 449 SEPFIVETDASDKGIGAVLMQ 469
Score = 46.6 bits (109), Expect(2) = 9e-27
Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFI-----STDSRKIKAVVKWPIPTSVKELRSFFG 234
+ YLGH I STD KI+ V WP+P SVKELRSF G
Sbjct: 352 LSYLGHIITPNGVSTDDDKIRVVQNWPVPGSVKELRSFLG 391
>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
Japonica Group]
Length = 1629
Score = 99.0 bits (245), Expect(2) = 1e-26
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGS-FEWSSQATQAFEELKEALISAPVLALPDF 65
FLG++GYYRKFVR Y + KPLT+LL+KG + W+++ AF+ LK+ALI+A VLA+PDF
Sbjct: 912 FLGLSGYYRKFVRNYGILSKPLTNLLRKGQLYIWTAETEDAFQALKQALITALVLAMPDF 971
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
+ F VETD S GIGAVLMQ
Sbjct: 972 QTPFVVETDASDKGIGAVLMQ 992
Score = 46.6 bits (109), Expect(2) = 1e-26
Identities = 23/38 (60%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Frame = -3
Query: 332 YLGHFI-----STDSRKIKAVVKWPIPTSVKELRSFFG 234
YLGH I STD KI+ + WP PTSVKELRSF G
Sbjct: 877 YLGHIIQPNGVSTDPEKIQVIQHWPAPTSVKELRSFLG 914
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 102 bits (254), Expect(2) = 1e-26
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKG-SFEWSSQATQAFEELKEALISAPVLALPDF 65
FLG+ GYYRKFVR + I KPLT LLKKG F+W+ + AF++LK+AL++APVLALPDF
Sbjct: 872 FLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFKWTPEIESAFQQLKQALVAAPVLALPDF 931
Query: 64 EHIFEVETDVSKTGIGAVLMQ 2
F +ETD S GIGAVL Q
Sbjct: 932 SKHFTIETDASDVGIGAVLSQ 952
Score = 42.7 bits (99), Expect(2) = 1e-26
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFI-----STDSRKIKAVVKWPIPTSVKELRSFFG 234
+ YLGH I +TD KI+ VV WP PT++K+LR F G
Sbjct: 835 ISYLGHVIGAAGVATDPAKIQDVVSWPQPTTIKKLRGFLG 874
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 102 bits (253), Expect(2) = 2e-26
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = -1
Query: 241 FLGMTGYYRKFVRKYASICKPLTDLLKKGSFEWSSQATQAFEELKEALISAPVLALPDFE 62
FLGMTGYYR+F++ Y IC+PL D+LKK F+W + T+AF+ LK+ + S+PVL LPDF
Sbjct: 875 FLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQWGEKQTEAFKFLKQKMCSSPVLTLPDFS 934
Query: 61 HIFEVETDVSKTGIGAVLMQ 2
F +E D TGIGAVLMQ
Sbjct: 935 KEFTIEADACGTGIGAVLMQ 954
Score = 42.7 bits (99), Expect(2) = 2e-26
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = -3
Query: 338 VEYLGHFIS-----TDSRKIKAVVKWPIPTSVKELRSFFG 234
V YLGH IS TD K++ +V WPIP +V +LR F G
Sbjct: 838 VSYLGHIISQNGVATDPGKVEKIVSWPIPKNVTDLRKFLG 877