BLASTX nr result
ID: Achyranthes22_contig00041941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00041941
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 101 1e-19
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 100 2e-19
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 100 2e-19
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 97 2e-18
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 94 2e-17
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 93 3e-17
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 89 5e-16
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 89 5e-16
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 89 8e-16
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 87 3e-15
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 86 5e-15
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 86 7e-15
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 85 9e-15
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 85 9e-15
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 84 2e-14
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 83 4e-14
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 81 2e-13
gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana] 77 2e-12
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 77 2e-12
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 77 2e-12
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 101 bits (251), Expect = 1e-19
Identities = 53/104 (50%), Positives = 63/104 (60%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DR SR IG GE R+GVYYL V + A + L HQRLGHPS L L S
Sbjct: 52 DRFSRTLIGSGEERDGVYYLTDVATAKIHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTS 111
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ + +CDVCF+AKQTR VFP S N + E F+LIHCD+WGP
Sbjct: 112 SSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGP 155
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 100 bits (249), Expect = 2e-19
Identities = 51/104 (49%), Positives = 61/104 (58%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DR SR IG GE R+GVYYL + L HQRLGHPS L L
Sbjct: 474 DRFSRTLIGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSG 533
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ +CDVCF+AKQTR VFPDS+N +T+ F+LIHCD+WGP
Sbjct: 534 SSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGP 577
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 100 bits (249), Expect = 2e-19
Identities = 51/104 (49%), Positives = 61/104 (58%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DR SR IG GE R+GVYYL + L HQRLGHPS L L
Sbjct: 474 DRFSRTLIGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLPLFSG 533
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ +CDVCF+AKQTR VFPDS+N +T+ F+LIHCD+WGP
Sbjct: 534 SSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGP 577
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 97.4 bits (241), Expect = 2e-18
Identities = 51/104 (49%), Positives = 59/104 (56%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DR+S+ IG GE R GVYYL V + A L HQRLGHPS L L
Sbjct: 491 DRSSKTLIGSGEERGGVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSK 550
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+CDVCF+AKQTR VFP+S N E F+LIHCD+WGP
Sbjct: 551 TSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLIHCDVWGP 594
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATS--ADTTFLLHQRLGHPSSQNLFLLSN- 143
DR R IG GE R GVYY V+ + A+S A + L H+RLGHPS+ L L
Sbjct: 461 DRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPEC 520
Query: 142 SRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+RS++ + +D+CD CF++KQTR VFP SNN E F+LIH D+WGP
Sbjct: 521 NRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGP 567
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DRTSR PIG+G+ RNGVYY KP+ + ++ + L H+RLGHPS + L + + +
Sbjct: 350 DRTSRNPIGVGKLRNGVYYYKPLQGEKVNAVKVEEKYELWHRRLGHPSDRVLASIHSLGN 409
Query: 133 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
N +K D CD C + KQ R+ F SN A E+F LIH D+WGP
Sbjct: 410 NVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGP 454
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/104 (44%), Positives = 61/104 (58%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DRT+ M IG G NG+Y+ + V A + + ++ L HQRLGHPSS+ L LL S
Sbjct: 468 DRTTLMLIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLPFSDV 527
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
C++C +AKQTR FP S+N + F L+HCDLWGP
Sbjct: 528 TSSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGP 571
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 89.4 bits (220), Expect = 5e-16
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DR SRM IG+GE G+Y+LK V TS + L H+R+GHPSS+ + L+ S
Sbjct: 285 DRISRMLIGVGEQCEGLYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRVVDLIXEVDS 344
Query: 133 NKIKEFLDN--CDVCFKAKQTRSVFPDSNNNATELFALIHCDLWG 5
+ N CD+CF+A+QTR +F S+N A E F LIHCDLWG
Sbjct: 345 VGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECFDLIHCDLWG 389
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DRT+RM G+G+ NG + + + A H + L H+RLGH S + + LL
Sbjct: 253 DRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELL 312
Query: 133 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ KE L+N CD C +AKQTR FP S+N + + F LIHCD+WGP
Sbjct: 313 SSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGP 357
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DRT+RM G+G+ NG + + + A H + L H+RLGH S + + LL
Sbjct: 253 DRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELL 312
Query: 133 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ KE L+N CD C +AKQTR FP +N + + F LIHCD+WGP
Sbjct: 313 SSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLIHCDVWGP 357
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DR SRM IG G+ G+Y+LK V T + L H+R+GHPSS+ + L+ S
Sbjct: 214 DRNSRMLIGTGKQCEGLYFLKGVALICAYETTGIASYELWHRRMGHPSSRVVDLIYEVDS 273
Query: 133 NKIKEFLDN--CDVCFKAKQTRSVFPDSNNNATELFALIHCDLWG 5
+ + N CD+CF+A+QTR VF S+N E F LIHCDLWG
Sbjct: 274 VGGNDGVKNKFCDICFRAQQTREVFFSSDNKVKECFDLIHCDLWG 318
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 85.5 bits (210), Expect = 7e-15
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DRT+RM +G+ NG + + + A H + L H+RLGH S + + LL
Sbjct: 477 DRTTRMVTRIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELL 536
Query: 133 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ KE L+N CD C +AKQTR FP S+N + + F LIHCD+WGP
Sbjct: 537 SSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGP 581
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHA-TSADTTFLLHQRLGHPSSQNLFLLSN-S 140
DR +R IG GE R GVYY V+ ++ + + L H RLGHPS+ L +
Sbjct: 465 DRFTRTLIGAGEEREGVYYFTGVLAARVNKGFKESSSATLWHHRLGHPSTGVLLSFPEFA 524
Query: 139 RSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
S+ E + +CD+C++AKQ R VF S N T F LIHCD+WGP
Sbjct: 525 SSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCDVWGP 570
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 85.1 bits (209), Expect = 9e-15
Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLL----S 146
D SRM IG GE R G+Y+LK V TS + L ++R+GHPSS+ + L+ S
Sbjct: 378 DHNSRMLIGAGEQREGLYFLKGVTPIRAYKTTSIASYELWNRRMGHPSSKIVDLIYEVDS 437
Query: 145 NSRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWG 5
R++ +K CD+ F+A+QTR VF S+N A E F LIHCDLWG
Sbjct: 438 VGRNDGVKNKF--CDIFFRAQQTREVFFSSDNKAKECFDLIHCDLWG 482
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 84.0 bits (206), Expect = 2e-14
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLL-HQRLGHPSSQNLFLLSNSR 137
DR + IG G+ +NG+Y+ + + ++ T D++ L H RLGHPSS+ L LLS S
Sbjct: 433 DRITLTLIGAGKQQNGLYFFRGT--ETVASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSD 490
Query: 136 SNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
S C++C KAKQTR FP SNN + F ++HCDLWGP
Sbjct: 491 STGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWGP 535
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 82.8 bits (203), Expect = 4e-14
Identities = 47/104 (45%), Positives = 60/104 (57%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
D T+R IGLG+ NG+YYL AL++A + L HQRLGHPSS L +L+
Sbjct: 501 DATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHSD-LWHQRLGHPSSGPLQVLAKVNP 559
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ CD+C AKQTR FP S ++ F LIHCD+WGP
Sbjct: 560 KIYFDSKHVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGP 603
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 80.9 bits (198), Expect = 2e-13
Identities = 53/116 (45%), Positives = 68/116 (58%), Gaps = 12/116 (10%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTT------FLLHQRLGHPSSQNLFL 152
DRTS+M IG+G NGVY+L Q+A ATSA+ L H RLGHPSS+ L
Sbjct: 473 DRTSKMLIGVGTESNGVYHL----QRAEVVATSANVVKWKTNKALWHMRLGHPSSKVLSS 528
Query: 151 LS------NSRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ +S S+ +K CDVC +AKQTR+ F +S N A E F+ IH D+WGP
Sbjct: 529 VLPSLEDFDSCSSDLKTI---CDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGP 581
>gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana]
Length = 1158
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DR ++ IG GE NG+Y+ + + A + + H+RLGHPSS+ + +L S
Sbjct: 264 DRITKTLIGAGEQLNGLYFFRGLGVAAPVQHKDSTPIDVWHRRLGHPSSKAMEMLKFSDF 323
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWG 5
+ +C++C AKQTR FP S+N + F LIHCDLWG
Sbjct: 324 SSSGFDSKDCEICISAKQTRDSFPLSSNKTSFAFELIHCDLWG 366
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 77.0 bits (188), Expect = 2e-12
Identities = 45/104 (43%), Positives = 58/104 (55%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
D T+R GLG+ NG+YYL AL++A + L HQRLGHPSS L +L+
Sbjct: 93 DATTRKTXGLGKQHNGLYYLAQDQNPALAYAIHKHSD-LWHQRLGHPSSGPLQVLAKVNX 151
Query: 133 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ CD+ AKQTR FP S ++ F LIHCD+WGP
Sbjct: 152 EIYFDSKHVCDIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGP 195
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = -1
Query: 313 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 134
DRTSRM +G G G ++ + A L H R+GHP+++ + L+ S
Sbjct: 353 DRTSRMVMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPESSV 412
Query: 133 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELFALIHCDLWGP 2
+ L+ CDVC +AKQTR+ FP S N +F LI+CDLWGP
Sbjct: 413 SVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGP 457