BLASTX nr result

ID: Achyranthes22_contig00040903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00040903
         (231 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318500.2| TRANSPARENT TESTA GLABRA 1 family protein [P...    60   3e-07
gb|AAM95641.1| WD-repeat protein GhTTG1 [Gossypium hirsutum]           58   1e-06
ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communi...    58   1e-06
gb|ABQ18246.1| transcription factor WD-repeat protein 1 [Caragan...    58   1e-06
ref|XP_004502764.1| PREDICTED: protein TRANSPARENT TESTA GLABRA ...    57   3e-06
dbj|BAH28880.1| WD40 repeats protein LjTTG1 [Lotus japonicus]          56   4e-06
gb|AFD20561.1| transparent testa glabra 1, partial [Gossypium ar...    55   7e-06
ref|XP_003602392.1| Protein TRANSPARENT TESTA GLABRA [Medicago t...    55   7e-06

>ref|XP_002318500.2| TRANSPARENT TESTA GLABRA 1 family protein [Populus trichocarpa]
           gi|550326082|gb|EEE96720.2| TRANSPARENT TESTA GLABRA 1
           family protein [Populus trichocarpa]
          Length = 340

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/55 (60%), Positives = 35/55 (63%)
 Frame = +3

Query: 66  MENSTQESHHLSNNLVTYDSPYPLYAMXXXXXXXXXXXXXTDQLIAVGSFIEDYN 230
           MENSTQESH  S N VTY+SPYPLYAM               Q IA+GSFIEDYN
Sbjct: 1   MENSTQESHLRSENTVTYESPYPLYAMAISSTASRTNQY---QRIALGSFIEDYN 52


>gb|AAM95641.1| WD-repeat protein GhTTG1 [Gossypium hirsutum]
          Length = 343

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/54 (59%), Positives = 35/54 (64%)
 Frame = +3

Query: 66  MENSTQESHHLSNNLVTYDSPYPLYAMXXXXXXXXXXXXXTDQLIAVGSFIEDY 227
           MENSTQESH  S+N VTY+SPYPLYAM               Q IA+GSFIEDY
Sbjct: 1   MENSTQESHLRSDNAVTYESPYPLYAMALSSTPAVTHLNY--QRIALGSFIEDY 52


>ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communis]
           gi|223529537|gb|EEF31490.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 342

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/55 (58%), Positives = 34/55 (61%)
 Frame = +3

Query: 66  MENSTQESHHLSNNLVTYDSPYPLYAMXXXXXXXXXXXXXTDQLIAVGSFIEDYN 230
           MENSTQESH  S N +TYDSPYPLYAM                 IAVGSFIEDY+
Sbjct: 1   MENSTQESHLKSENSITYDSPYPLYAMAFSSSPSSSSTH--HHRIAVGSFIEDYS 53


>gb|ABQ18246.1| transcription factor WD-repeat protein 1 [Caragana jubata]
          Length = 337

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/54 (59%), Positives = 34/54 (62%)
 Frame = +3

Query: 66  MENSTQESHHLSNNLVTYDSPYPLYAMXXXXXXXXXXXXXTDQLIAVGSFIEDY 227
           M+NSTQESH  S N VTYDSPYPLYAM               Q IAVGSFIE+Y
Sbjct: 1   MDNSTQESHLRSENSVTYDSPYPLYAM---------SFSPNSQRIAVGSFIEEY 45


>ref|XP_004502764.1| PREDICTED: protein TRANSPARENT TESTA GLABRA 1-like isoform X1
           [Cicer arietinum] gi|502136639|ref|XP_004502765.1|
           PREDICTED: protein TRANSPARENT TESTA GLABRA 1-like
           isoform X2 [Cicer arietinum]
          Length = 342

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/54 (59%), Positives = 35/54 (64%)
 Frame = +3

Query: 66  MENSTQESHHLSNNLVTYDSPYPLYAMXXXXXXXXXXXXXTDQLIAVGSFIEDY 227
           MENSTQES+  S+N VTYDSPYPLYAM               Q IAVGSFIE+Y
Sbjct: 1   MENSTQESNLRSDNSVTYDSPYPLYAM----AFSSNPNSQQQQRIAVGSFIEEY 50


>dbj|BAH28880.1| WD40 repeats protein LjTTG1 [Lotus japonicus]
          Length = 349

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 66  MENSTQESHHLSNNLVTYDSPYPLYAM--XXXXXXXXXXXXXTDQLIAVGSFIEDY 227
           M+NSTQ+SH  S N VTYDSPYPLYAM               T Q +AVGSF+E+Y
Sbjct: 1   MDNSTQDSHLRSENSVTYDSPYPLYAMAFSPNNNNNSHSAATTTQRLAVGSFLEEY 56


>gb|AFD20561.1| transparent testa glabra 1, partial [Gossypium arboreum]
          Length = 343

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/54 (57%), Positives = 34/54 (62%)
 Frame = +3

Query: 66  MENSTQESHHLSNNLVTYDSPYPLYAMXXXXXXXXXXXXXTDQLIAVGSFIEDY 227
           MENSTQESH  S+N VTY+SPYPLYAM               Q IA+GSFIE Y
Sbjct: 1   MENSTQESHLRSDNAVTYESPYPLYAMALSSTPAVTHLNY--QRIALGSFIEGY 52


>ref|XP_003602392.1| Protein TRANSPARENT TESTA GLABRA [Medicago truncatula]
           gi|158024528|gb|ABW08112.1| WD40-1 protein [Medicago
           truncatula] gi|355491440|gb|AES72643.1| Protein
           TRANSPARENT TESTA GLABRA [Medicago truncatula]
          Length = 342

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/55 (60%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 66  MENSTQESHHLS-NNLVTYDSPYPLYAMXXXXXXXXXXXXXTDQLIAVGSFIEDY 227
           M+NSTQESH  S NN VTYDSPYPLYAM               Q IAVGSFIE+Y
Sbjct: 1   MDNSTQESHLRSDNNSVTYDSPYPLYAM-----SISPNTNSPQQRIAVGSFIEEY 50


Top