BLASTX nr result
ID: Achyranthes22_contig00040473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00040473
(1668 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 469 e-129
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 461 e-127
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 439 e-120
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 431 e-118
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 431 e-118
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 429 e-117
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 427 e-117
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 427 e-117
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 426 e-116
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 426 e-116
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 426 e-116
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 426 e-116
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 425 e-116
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 424 e-116
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 419 e-114
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 418 e-114
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 416 e-113
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 398 e-108
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 397 e-108
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 387 e-104
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 469 bits (1207), Expect = e-129
Identities = 219/350 (62%), Positives = 279/350 (79%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F G +LCVP P RNLLI+EVHS GLAGH G+ KT ++LQ FYWP ML V V+ RC
Sbjct: 1067 FFGNKLCVPRGPYRNLLIREVHSNGLAGHFGIQKTYDILQEQFYWPKMLGDVQDVIKRCA 1126
Query: 181 TCQRAKMVFHKGLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFVP 360
CQ++K F G Y PLPVP +PWED+SMDFI+ALPRTQRGKDSIMVVVDRFSKMAHF+
Sbjct: 1127 PCQQSKSYFQTGPYTPLPVPNQPWEDISMDFIVALPRTQRGKDSIMVVVDRFSKMAHFIA 1186
Query: 361 CHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHHP 540
C K +DA VA LYF E+V+LHG+P++IVSDRD+KF+SHFW++LW+L+ T+LLFSTSHHP
Sbjct: 1187 CKKTEDATSVAELYFKEVVKLHGIPKSIVSDRDSKFMSHFWRTLWKLLKTRLLFSTSHHP 1246
Query: 541 QTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVNP 720
QTDGQTEV N+ +G +LR V +S +DWDLKLA A+FA+NR PS TT SPFE+VYGVNP
Sbjct: 1247 QTDGQTEVTNKTLGRILRCTVARSLKDWDLKLAQAEFAFNRAPSTTTGKSPFEVVYGVNP 1306
Query: 721 YVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFEV 900
+P DL A K + +AK++ E M+++H++V++ IEKANE +K K +KG+KG + FE
Sbjct: 1307 MMPTDL-APIKRNTIDYDAKKRVEQMLHIHEQVKKQIEKANEAHKGK-SKGVKGTKSFEP 1364
Query: 901 GDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVWI+LRKERFP +RKNKLMPRA+GP++++ K NAYK++L G++GV
Sbjct: 1365 GDLVWIHLRKERFPEKRKNKLMPRADGPFEVLEKFGSNAYKINLPGEYGV 1414
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 461 bits (1186), Expect = e-127
Identities = 219/350 (62%), Positives = 278/350 (79%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+G +LCVP R+LLI+EVHSGG+ GH GV KT+E+LQ FYWP M+ V ++ RC
Sbjct: 1079 FQGNKLCVPRGSYRDLLIREVHSGGMGGHFGVQKTLEILQDQFYWPRMMGDVQIILRRCS 1138
Query: 181 TCQRAKMVFHKGLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFVP 360
CQ +K F G Y PLPVP +PWEDLSMDFI+ALPRTQRGKDS+MVVVDRFSKMAHFV
Sbjct: 1139 KCQLSKSSFQPGPYTPLPVPSKPWEDLSMDFIVALPRTQRGKDSVMVVVDRFSKMAHFVA 1198
Query: 361 CHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHHP 540
C K +DA VA L+ EIVRLHGVP+TIVSDRDTKF+ +FWK+LW+L+ TKLLFSTSHHP
Sbjct: 1199 CKKTEDAVSVAELFLKEIVRLHGVPKTIVSDRDTKFMGYFWKTLWKLLKTKLLFSTSHHP 1258
Query: 541 QTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVNP 720
QTDGQTEV NR +G +LR LV+KS +DWDLKLA A+FA+NR PS T +SPFE+VYGVNP
Sbjct: 1259 QTDGQTEVTNRTLGRILRCLVSKSLKDWDLKLAAAEFAFNRAPSTATGHSPFEVVYGVNP 1318
Query: 721 YVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFEV 900
+P+DL ++ K+ ++ +A ++AE ++ +H+ V+R IE+ NE Y +K K KG + FE
Sbjct: 1319 LMPLDLSSVPKEN-INLDAMKRAEQLLKLHETVKRQIERTNEQY-QKHLKVPKGKKEFEP 1376
Query: 901 GDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVWI+LRKERFP +RKNKLMPR++GP+++V K+ +AYK+DL GD+GV
Sbjct: 1377 GDLVWIHLRKERFPAKRKNKLMPRSDGPFEVVEKIGPSAYKIDLPGDYGV 1426
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 439 bits (1130), Expect = e-120
Identities = 207/351 (58%), Positives = 267/351 (76%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ +R LL+QE H GGL GH G KT ++L +HF+WP M V V+RC
Sbjct: 1180 FRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCA 1239
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK H GLY PLPVP PWED+SMDF++ LPRT+RG+DSI VVVDRFSKMAHF+
Sbjct: 1240 TCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFI 1299
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA +A L+F EIVRLHGVP TIVSDRDTKFLSHFW++LW +GTKLLFST+ H
Sbjct: 1300 PCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCH 1359
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ K+ + W+ L H +FAYNR+ TTK PF+IVYG+
Sbjct: 1360 PQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLL 1419
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + ++ +AK++AE M+ +H+ + NIE+ N YK +KG + + FE
Sbjct: 1420 PRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELT-FE 1478
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRKERFP RK+KLMPRA+GP+K++AK+NENAYK+DL D GV
Sbjct: 1479 PGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGV 1529
Score = 233 bits (593), Expect = 2e-58
Identities = 133/352 (37%), Positives = 201/352 (57%), Gaps = 7/352 (1%)
Frame = +1
Query: 13 RLCVPSC-PIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCGTCQ 189
R+CVP ++ L++QE H + H G K L+ ++W +M + V+ C CQ
Sbjct: 2004 RVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQ 2063
Query: 190 RAKMVFHK--GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFVPC 363
R K + GL +PL VPE W+++ MDFI LP+TQ G DSI VVVDR +K+A F+P
Sbjct: 2064 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPV 2123
Query: 364 HKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHHPQ 543
K+A LYF IV LHGVP+ IVSDR+++F SHFWK L +GT+L FST++HPQ
Sbjct: 2124 KTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQ 2183
Query: 544 TDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVNPY 723
TDGQTE +N+++ +L A V G+ WD L +A+F+YN + + + +P+E +YG
Sbjct: 2184 TDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCR 2243
Query: 724 VPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFEVG 903
P+ + + + + +AE V + + N++ A K A+ + + F V
Sbjct: 2244 TPLLWDQVGESQVFGTDILREAEAKV---RTIWDNLKVAQSRQKSYADNRRRNL-EFAVD 2299
Query: 904 DLVWIYLRKERFPG----RRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHG 1047
D ++YLR G + K KL PR GP++I+A+ E AY+++L G
Sbjct: 2300 D--FVYLRVTPLRGVHRFQTKGKLAPRFVGPFRIIARRGEVAYQLELPASLG 2349
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 431 bits (1107), Expect = e-118
Identities = 205/351 (58%), Positives = 264/351 (75%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ +R LL+QE H GGL GH GV KT ++L HF+WP M V V+RC
Sbjct: 1208 FRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCT 1267
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK+ + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 1268 TCQKAKLRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1327
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EIVRLHGVP TIVSDRDTKFLSHFW++LW +GTKLLFST+ H
Sbjct: 1328 PCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCH 1387
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ K+ + W+ L H +FAYNR+ TTK PFEIVYG+
Sbjct: 1388 PQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLL 1447
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + V+ +AK AE M+ +H+ + NIE+ N YK +KG K V FE
Sbjct: 1448 PRAPIDLLPLPTSERVNFDAKYHAELMLKLHETTKENIERMNIKYKLAGSKGKKHVA-FE 1506
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KL+PRA+GP+K++ K+N+N YK++L D GV
Sbjct: 1507 PGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNTYKLELPADFGV 1557
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 431 bits (1107), Expect = e-118
Identities = 203/351 (57%), Positives = 264/351 (75%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ +R LL+QE H GGL GH G KT ++L +HF+WP M V V+RC
Sbjct: 1159 FRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCA 1218
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK H GLY PLPVP PWED+SMDF++ LPRT+RG+DSI VVVDRFSKM HF+
Sbjct: 1219 TCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFI 1278
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA +A L+F EIVRLHGVP TIVSDRDTKFLSHFW++LW +GTKLLFST+ H
Sbjct: 1279 PCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCH 1338
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQ EVVNR + ++LRA++ K+ + W+ L H +FA NR+ TTK PF+IVY +
Sbjct: 1339 PQTDGQIEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFACNRSLHSTTKMCPFQIVYSLL 1398
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + ++ +AK++AE M+ +H+ + NIE+ N YK +KG + + +FE
Sbjct: 1399 PRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRREL-NFE 1457
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRKERFP RK+KLMPRA+GP+K++AK+NENAYK+DL D GV
Sbjct: 1458 PGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGV 1508
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 429 bits (1104), Expect = e-117
Identities = 205/351 (58%), Positives = 263/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ +R LL+QE H GGL GH GV KT ++L HF+WP M V V+RC
Sbjct: 521 FRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCT 580
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 581 TCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 640
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EIVRLHGVP TIVSDRDTKFLSHFW++LW +GTKLLFST+ H
Sbjct: 641 PCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCH 700
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ K+ + W+ L H +FAYN + TTK PFEIVYG+
Sbjct: 701 PQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNHSQHSTTKKCPFEIVYGLL 760
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + V+ +AK +AE M+ +H+ + NIE+ N YK +KG K V FE
Sbjct: 761 PRAPIDLLPLPTSERVNFDAKHRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVA-FE 819
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KL PRA+GP+K++ K+N+NAYK++L D GV
Sbjct: 820 PGDLVWLHLRKDRFPNLRKSKLQPRADGPFKVLQKINDNAYKLELPADFGV 870
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 427 bits (1098), Expect = e-117
Identities = 199/351 (56%), Positives = 265/351 (75%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ +R LL+QE H GGL GH G KT ++L HF+WP M V +V+RC
Sbjct: 1183 FRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRRDVVRLVARCT 1242
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK + GLY PLPVP PWED+SMDF++ LPRT++G+DS+ VVVDRFSKMAHF+
Sbjct: 1243 TCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFI 1302
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA +A L+F EIVRLHGVP TIVSDRD KFLSHFW++LW +GTKLLFST+ H
Sbjct: 1303 PCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCH 1362
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ K+ + W+ L H +FAYNR+ TTK PF+IVYG+
Sbjct: 1363 PQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLL 1422
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + ++ +A +AE M+ +H+ + NIE+ N YK ++KG K + +FE
Sbjct: 1423 PRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASDKGRKEI-NFE 1481
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRKERFP RK+KL+PRA+GP+K++ K+N+NAY++DL D GV
Sbjct: 1482 PGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLDLPADFGV 1532
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 427 bits (1098), Expect = e-117
Identities = 204/351 (58%), Positives = 263/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ +R LL+QE H GGL GH GV KT ++L HF+WP M V V+RC
Sbjct: 1208 FRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCT 1267
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 1268 TCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1327
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EIVRLHGVP TIVSDRDTKFLSHFW++LW +GTK LFST+ H
Sbjct: 1328 PCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKFLFSTTCH 1387
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ K+ + W+ L H +FAYNR+ TTK PFEIVYG+
Sbjct: 1388 PQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLL 1447
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ + V+ +AK +AE M+ +H+ + NIE+ N YK +KG K V FE
Sbjct: 1448 PRAPIDLLPHPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVA-FE 1506
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KL+PRA+GP+K++ K+N+NAYK++L D GV
Sbjct: 1507 PGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGV 1557
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 426 bits (1096), Expect = e-116
Identities = 199/351 (56%), Positives = 261/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LCVP C +R LL+QE H+GGL GH G KT ++L HFYWP M V +V RC
Sbjct: 1183 FRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCV 1242
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TC +AK + GLY PLPVP PWED+SMDF++ LPRT+RG+DSI VVVDRFSKMAHF+
Sbjct: 1243 TCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFI 1302
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA +A+L+F EIVRLHG+P+TIVSDRDTKFLS+FWK+LW +GT+LLFST+ H
Sbjct: 1303 PCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCH 1362
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + LLRAL+ K+ ++W+ L H +FAYNR TT PFE+VYG
Sbjct: 1363 PQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFK 1422
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + A ++A ++ +H++ + IEK ++ Y ANK K V FE
Sbjct: 1423 PLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVT-FE 1481
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP +RK+KLMPR +GP+++++K+N+NAYK++L D+GV
Sbjct: 1482 PGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGV 1532
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 426 bits (1096), Expect = e-116
Identities = 199/351 (56%), Positives = 260/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LCVP C +R LL+QE H+GGL GH G KT ++L HFYWP M V +V RC
Sbjct: 151 FRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCV 210
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TC +AK + GLY PLPVP PWED+SMDF++ LPRT+RG+DSI VVVDRFSKMAHF+
Sbjct: 211 TCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFI 270
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA +A+L+F EIVRLHG+P+TIVSDRDTKFLS+FWK+LW +GT+LLFST+ H
Sbjct: 271 PCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCH 330
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + LLRAL+ K+ ++W+ L H +FAYNR TT PFE+VYG
Sbjct: 331 PQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFK 390
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + A + A ++ +H++ + IEK ++ Y ANK K V FE
Sbjct: 391 PLAPIDLLPLPLQERSDMEASKHATYVKKIHEKTKEAIEKRSKYYAAWANKDRKKVT-FE 449
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP +RK+KLMPR +GP+++++K+N+NAYK++L D+GV
Sbjct: 450 PGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGV 500
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 426 bits (1096), Expect = e-116
Identities = 199/351 (56%), Positives = 261/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LCVP C +R LL+QE H+GGL GH G KT ++L HFYWP M V +V RC
Sbjct: 151 FRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCV 210
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TC +AK + GLY PLPVP PWED+SMDF++ LPRT+RG+DSI VVVDRFSKMAHF+
Sbjct: 211 TCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFI 270
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA +A+L+F EIVRLHG+P+TIVSDRDTKFLS+FWK+LW +GT+LLFST+ H
Sbjct: 271 PCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCH 330
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + LLRAL+ K+ ++W+ L H +FAYNR TT PFE+VYG
Sbjct: 331 PQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFK 390
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + A ++A ++ +H++ + IEK ++ Y ANK K V FE
Sbjct: 391 PLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVT-FE 449
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP +RK+KLMPR +GP+++++K+N+NAYK++L D+GV
Sbjct: 450 PGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGV 500
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 426 bits (1095), Expect = e-116
Identities = 203/351 (57%), Positives = 261/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ +R LL+QE H GGL GH GV KT ++L HF+WP M V V+RC
Sbjct: 1224 FRANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCT 1283
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQRAK + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 1284 TCQRAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1343
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EI+RLHGVP TIVSDRDTKFLSHFW+ LW +G KLLFST+ H
Sbjct: 1344 PCHKSDDAVNVADLFFREIIRLHGVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCH 1403
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ + + W+ L H +FAYNR+ TTK PFEIVYG
Sbjct: 1404 PQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFL 1463
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + V+ +AKE++E ++ +H+ + NIE+ N YK +KG K V F
Sbjct: 1464 PRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKGRKHV-VFA 1522
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KLMPRA+GP+K++ K+N+NAYK++L D GV
Sbjct: 1523 PGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGV 1573
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 425 bits (1092), Expect = e-116
Identities = 203/351 (57%), Positives = 262/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ + LL+QE H GGL GH GV K ++L HF+WP V V+RC
Sbjct: 1208 FRANKLCIPASSVHMLLLQEAHGGGLMGHFGVKKMEDILADHFFWPKKRRDVERFVARCT 1267
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 1268 TCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1327
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EIVRLHGVP TIVSDRDTKFLSHFW++LW +GTKLLFST+ H
Sbjct: 1328 PCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCH 1387
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ K+ + W+ L H +FAYNR+ TTK PFEIVYG+
Sbjct: 1388 PQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLL 1447
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + V+ +AK +AE M+ +H+ + NIE+ N YK +KG K V FE
Sbjct: 1448 PRAPIDLLPLPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVA-FE 1506
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KL+PRA+GP+K++ K+N+NAYK++L D GV
Sbjct: 1507 PGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGV 1557
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 424 bits (1089), Expect = e-116
Identities = 204/351 (58%), Positives = 262/351 (74%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ + LL+QE H GGL GH GV KT ++L H +WP M V V+RC
Sbjct: 1104 FRANKLCIPASSVHMLLLQEAHGGGLMGHFGVKKTEDILADHLFWPKMRRDVERFVARCT 1163
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 1164 TCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1223
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EIVRLHGVP TIVSDRDTKFLSHFW++LW +GTKLLFST+ H
Sbjct: 1224 PCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCH 1283
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR V ++LRA++ K+ + W+ L H +FAYNR+ TTK PFEIVYG+
Sbjct: 1284 PQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLL 1343
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ L + V+ +AK +AE M+ +H+ + NIE+ N YK +KG K V FE
Sbjct: 1344 PRAPIDLLPLPTLERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVA-FE 1402
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KL PRA+GP++++ K+N+NAYK++L D GV
Sbjct: 1403 PGDLVWLHLRKDRFPNLRKSKLPPRADGPFQVLQKINDNAYKLELPADFGV 1453
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 419 bits (1076), Expect = e-114
Identities = 201/351 (57%), Positives = 259/351 (73%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ IR LL+QE H GGL GH GV K ++L HF+WP M V V+RC
Sbjct: 1239 FRANKLCIPASSIRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMRRDVERFVARCT 1298
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 1299 TCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1358
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EI+RLHGVP TIVSDRD KFLSHFW+ LW +GTKLLFST+ H
Sbjct: 1359 PCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCH 1418
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ + + W+ L H +FAYNR+ TTK PFEIVYG
Sbjct: 1419 PQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFL 1478
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ + + V+ +AKE+AE ++ +H+ + NIE+ N YK +KG K V F
Sbjct: 1479 PRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKGRKHV-VFA 1537
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KLMPRA GP+K++ K+N+NAY+++L D GV
Sbjct: 1538 PGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFGV 1588
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 418 bits (1074), Expect = e-114
Identities = 201/351 (57%), Positives = 259/351 (73%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F+ +LC+P+ IR LL+QE H GGL GH GV K ++L HF+WP M V V+RC
Sbjct: 1236 FRANKLCIPASSIRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMRRDVERFVARCT 1295
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TCQ+AK + GLY PLPVP PWED+SMDF++ LPRT++G+DSI VVVDRFSKMAHF+
Sbjct: 1296 TCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1355
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA VA L+F EI+RLHGVP TIVSDRD KFLSHFW+ LW +GTKLLFST+ H
Sbjct: 1356 PCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCH 1415
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + ++LRA++ + + W+ L H +FAYNR+ TTK PFEIVYG
Sbjct: 1416 PQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFL 1475
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P PIDL+ + + V+ +AKE+AE ++ +H+ + NIE+ N YK +KG K V F
Sbjct: 1476 PRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKGRKHV-VFA 1534
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW++LRK+RFP RK+KLMPRA GP+K++ K+N+NAY+++L D GV
Sbjct: 1535 PGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPXDFGV 1585
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 416 bits (1069), Expect = e-113
Identities = 198/363 (54%), Positives = 263/363 (72%), Gaps = 8/363 (2%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
F RLC+P+ +R L I+E H GGL GH GV+KT++++Q HF+WP+M V + RC
Sbjct: 1371 FYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKRDVERICERCP 1430
Query: 181 TCQRAKMVFHK-GLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
TC++AK GLY PLP+P PW D+SMDF++ LPRT+ GKDSI VVVDRFSKMAHF+
Sbjct: 1431 TCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFI 1490
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PCHK DDA +A L+F E+VRLHG+P+TIVSDRDTKFLS+FWK+LW +GTKLLFST+ H
Sbjct: 1491 PCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCH 1550
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR + +LLRAL+ K+ + W+ L H +FAYN + +K+SPF+IVYG N
Sbjct: 1551 PQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSMHSASKFSPFQIVYGFN 1610
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P P+DL+ L + V + K++AE + +H++ ++NIE+ + Y + ANK K V F
Sbjct: 1611 PTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEEKTKQYAKHANKSRKEV-IFN 1669
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV-------DK 1056
GDLVWI+LRKERFP RK+KLM R +GP+K++ ++N NAY +DL G + V D
Sbjct: 1670 EGDLVWIHLRKERFPKERKSKLMSRIDGPFKVLKRINNNAYSLDLQGKYNVSNSFNVADL 1729
Query: 1057 FPF 1065
FPF
Sbjct: 1730 FPF 1732
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 398 bits (1022), Expect = e-108
Identities = 193/351 (54%), Positives = 249/351 (70%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
FK +LCVP+C +R L ++E H GGL GH GV KT+E+L HFYWP+M V V S C
Sbjct: 1133 FKENKLCVPNCSLRELFVREAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCL 1192
Query: 181 TCQRAKM-VFHKGLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
C++AK GLY PLPV PW D+SMDFI+ LPRT+ GKDSI VVVDRFSKMA F+
Sbjct: 1193 ECKQAKSRTLPHGLYTPLPVSNSPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFI 1252
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PC K +DA VA L+ E+V+LHG+PRTIVSDRD KFLSHFW+ LW +GTKLLFSTS H
Sbjct: 1253 PCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCH 1312
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR +G++LRA++ W+ L +FAYNRT +T +PFE+VYG N
Sbjct: 1313 PQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFN 1372
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P P+DL+ L + F + + K++A+ M +H++ R IEK N+ + NKG K V F+
Sbjct: 1373 PLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYV-IFK 1431
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW+++RKERFP +RK KL PR GPYK++ ++ +NAYK+DL G+ V
Sbjct: 1432 PGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQV 1482
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 397 bits (1020), Expect = e-108
Identities = 193/351 (54%), Positives = 249/351 (70%), Gaps = 1/351 (0%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
FK +LCVP+C +R L ++E H GGL GH GV KT+E+L HFYWP+M V V S C
Sbjct: 1133 FKENKLCVPNCSLRELFVREAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCL 1192
Query: 181 TCQRAKM-VFHKGLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFV 357
C++AK GLY PLPV PW D+SMDFI+ LPRT+ GKDSI VVVDRFSKMA F+
Sbjct: 1193 ECKQAKSRTLPHGLYTPLPVSNFPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFI 1252
Query: 358 PCHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHH 537
PC K +DA VA L+ E+V+LHG+PRTIVSDRD KFLSHFW+ LW +GTKLLFSTS H
Sbjct: 1253 PCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCH 1312
Query: 538 PQTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVN 717
PQTDGQTEVVNR +G++LRA++ W+ L +FAYNRT +T +PFE+VYG N
Sbjct: 1313 PQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFN 1372
Query: 718 PYVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFE 897
P P+DL+ L + F + + K++A+ M +H++ R IEK N+ + NKG K V F+
Sbjct: 1373 PLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYV-IFK 1431
Query: 898 VGDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW+++RKERFP +RK KL PR GPYK++ ++ +NAYK+DL G+ V
Sbjct: 1432 PGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQV 1482
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 387 bits (993), Expect = e-104
Identities = 189/350 (54%), Positives = 243/350 (69%)
Frame = +1
Query: 1 FKGTRLCVPSCPIRNLLIQEVHSGGLAGHVGVNKTMELLQAHFYWPNMLSHVFHVVSRCG 180
FK +LCVP+C +R L ++E H GGL GH GV KT+E+L HFYWP+M V SR
Sbjct: 651 FKENKLCVPNCSLRELFVREAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKAKSR-- 708
Query: 181 TCQRAKMVFHKGLYKPLPVPERPWEDLSMDFIMALPRTQRGKDSIMVVVDRFSKMAHFVP 360
GLY PLPV PW D+SMDFI+ LPRT+ GKDSI VVVDRFSKMA F+P
Sbjct: 709 -------TLPHGLYTPLPVSNSPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIP 761
Query: 361 CHKVDDAQKVAALYFGEIVRLHGVPRTIVSDRDTKFLSHFWKSLWRLMGTKLLFSTSHHP 540
C K +DA VA L+ E+V+LHG+PRTIVSDRD KFLSHFW+ LW +GTKLLFSTS HP
Sbjct: 762 CKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHP 821
Query: 541 QTDGQTEVVNRMVGSLLRALVNKSGRDWDLKLAHAKFAYNRTPSMTTKYSPFEIVYGVNP 720
QTDGQTEVVNR +G++LRA++ W+ L +FAYNRT +T +PFE+VYG NP
Sbjct: 822 QTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNP 881
Query: 721 YVPIDLIALTKDKFVHGNAKEQAEFMVNVHKEVRRNIEKANEIYKRKANKGIKGVRHFEV 900
P+DL+ L + F + + K++A+ M +H++ R IEK N+ + NKG K V F+
Sbjct: 882 LTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYV-IFKP 940
Query: 901 GDLVWIYLRKERFPGRRKNKLMPRAEGPYKIVAKVNENAYKVDLGGDHGV 1050
GDLVW+++RKERFP +RK KL PR GPYK++ ++ +NAYK+DL G+ V
Sbjct: 941 GDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQV 990