BLASTX nr result
ID: Achyranthes22_contig00039998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00039998
(1473 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V... 603 e-170
ref|XP_002520343.1| replication factor C / DNA polymerase III ga... 598 e-168
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li... 593 e-167
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr... 591 e-166
gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis] ... 589 e-165
ref|XP_002302226.1| replication factor C 36 kDA family protein [... 587 e-165
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li... 586 e-165
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li... 582 e-163
ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-li... 577 e-162
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li... 576 e-162
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li... 575 e-161
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc... 572 e-160
ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-li... 571 e-160
ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-li... 570 e-160
ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutr... 561 e-157
gb|EOY16353.1| Replication factor C / DNA polymerase III gamma-t... 558 e-156
ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-li... 558 e-156
gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus... 556 e-156
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g... 553 e-155
dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa... 548 e-153
>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
gi|302141794|emb|CBI18997.3| unnamed protein product
[Vitis vinifera]
Length = 360
Score = 603 bits (1556), Expect = e-170
Identities = 308/362 (85%), Positives = 337/362 (93%), Gaps = 2/362 (0%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVV--PGDGKSTLWVEKYRPQSLADVAAHRDII 249
MA+ ++ MD+D N L NKGK+VVV P D K+T WVEKYRPQSLADVAAHRDI+
Sbjct: 1 MAEAVTVMDIDEE--DNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIV 58
Query: 250 DTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVR 429
DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG QFHNMILELNASD+RGIDVVR
Sbjct: 59 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVR 118
Query: 430 QQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVN 609
QQIQDFASTQSFSFG+KS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+VN
Sbjct: 119 QQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 178
Query: 610 KVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNI 789
K+I ALQSRCTRFRFAPLD +HVTERLKHVI AE LDV+ESGLAALVRLS+GDMRKALNI
Sbjct: 179 KIIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNI 238
Query: 790 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVD 969
LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE+FA SF +ISE+K RKGLALVD
Sbjct: 239 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVD 298
Query: 970 IIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAA 1149
++REVTMFVFKI+MP+D+RVQLIND+ADIEYRLSFGC+DKLQLG+LIASFT+AR+ALVAA
Sbjct: 299 VVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAA 358
Query: 1150 AK 1155
AK
Sbjct: 359 AK 360
>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540562|gb|EEF42129.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 360
Score = 598 bits (1542), Expect = e-168
Identities = 306/362 (84%), Positives = 334/362 (92%), Gaps = 2/362 (0%)
Frame = +1
Query: 76 MADTMSPMDVDNTTAS--NPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDII 249
MAD ++ MD+D N PNKGKNV V D K+T WVEKYRPQSLADVAAHRDI+
Sbjct: 1 MADVVTIMDIDEDVKEKQNQLSKPNKGKNVFV--DTKATPWVEKYRPQSLADVAAHRDIV 58
Query: 250 DTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVR 429
DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVR
Sbjct: 59 DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVVR 118
Query: 430 QQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVN 609
QQIQDFASTQSFSF +KS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+VN
Sbjct: 119 QQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 178
Query: 610 KVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNI 789
K+I ALQSRCTRFRFAPLDPIHVT+RLKHVI+AEGLDV E GLAA+VRLS GDMRKALNI
Sbjct: 179 KIIPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALNI 238
Query: 790 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVD 969
LQSTHMASQQITEEAV+LCTGNPLPKDI+QISYWLLNE+FA SF +ISE+KT+KGLALVD
Sbjct: 239 LQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALVD 298
Query: 970 IIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAA 1149
I+REVTMFVFKI+MP+D+RVQLINDMADIEYRLSFGCSDKLQLG+L+ASFT ARSALVAA
Sbjct: 299 IVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFTWARSALVAA 358
Query: 1150 AK 1155
AK
Sbjct: 359 AK 360
>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
Length = 364
Score = 593 bits (1528), Expect = e-167
Identities = 302/363 (83%), Positives = 335/363 (92%), Gaps = 4/363 (1%)
Frame = +1
Query: 79 ADTMSPMDVDNTTASNPTLNP-NKGKNVVVPG---DGKSTLWVEKYRPQSLADVAAHRDI 246
A+T+S MD+D N L P + GKNV+V G D K++ WVEKYRPQSLADVAAHRDI
Sbjct: 4 AETVSLMDIDED--ENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61
Query: 247 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 426
+DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVV
Sbjct: 62 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121
Query: 427 RQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 606
RQQIQDFASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN V
Sbjct: 122 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181
Query: 607 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALN 786
NK+I ALQSRCTRFRFAPL+P+HVTERLKHVI+AEGLDVTE GLAALVRL GDMRKALN
Sbjct: 182 NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALN 241
Query: 787 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALV 966
ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE+FA SF +ISEMK RKGLALV
Sbjct: 242 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALV 301
Query: 967 DIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVA 1146
DI+REVTMFVFKI+MP+D+RV+L+ND+ADIEYRLSFGC+DKLQLG++I++FT+ARSA+VA
Sbjct: 302 DIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVA 361
Query: 1147 AAK 1155
AAK
Sbjct: 362 AAK 364
>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
gi|557536359|gb|ESR47477.1| hypothetical protein
CICLE_v10001597mg [Citrus clementina]
Length = 364
Score = 591 bits (1524), Expect = e-166
Identities = 302/363 (83%), Positives = 334/363 (92%), Gaps = 4/363 (1%)
Frame = +1
Query: 79 ADTMSPMDVDNTTASNPTLNP-NKGKNVVVPG---DGKSTLWVEKYRPQSLADVAAHRDI 246
A+T+S MD D N L P + GKNV+V G D K++ WVEKYRPQSLADVAAHRDI
Sbjct: 4 AETVSLMDFDED--ENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61
Query: 247 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 426
+DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVV
Sbjct: 62 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121
Query: 427 RQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 606
RQQIQDFASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN V
Sbjct: 122 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181
Query: 607 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALN 786
NK+I ALQSRCTRFRFAPL+P+HVTERLKHVI+AEGLDVTE GLAALVRL GDMRKALN
Sbjct: 182 NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALN 241
Query: 787 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALV 966
ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE+FA SF +ISEMK RKGLALV
Sbjct: 242 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALV 301
Query: 967 DIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVA 1146
DI+REVTMFVFKI+MP+D+RV+L+ND+ADIEYRLSFGC+DKLQLG++I++FT+ARSA+VA
Sbjct: 302 DIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVA 361
Query: 1147 AAK 1155
AAK
Sbjct: 362 AAK 364
>gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis]
gi|587990838|gb|EXC75062.1| Replication factor C subunit
5 [Morus notabilis]
Length = 365
Score = 589 bits (1518), Expect = e-165
Identities = 302/365 (82%), Positives = 332/365 (90%), Gaps = 5/365 (1%)
Frame = +1
Query: 76 MADTMSPMDVDNT-TASNPTLNP-NKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDII 249
M + +S MD+D+ A + + P NKGK+ P DGK+T WVEKYRPQSLADVAAHRDII
Sbjct: 1 MTEVVSLMDIDDDDNAGDRSAKPINKGKSGAAPSDGKATPWVEKYRPQSLADVAAHRDII 60
Query: 250 DTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVR 429
DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVR
Sbjct: 61 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 120
Query: 430 QQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVN 609
QQIQDFASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRF+LICNNVN
Sbjct: 121 QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICNNVN 180
Query: 610 KVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEG---LDVTESGLAALVRLSTGDMRKA 780
K+I ALQSRCTRFRFAPLDP+HV ERLKHVI+AEG LDV+ESGL A VRLS GDMRKA
Sbjct: 181 KIIPALQSRCTRFRFAPLDPVHVNERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMRKA 240
Query: 781 LNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLA 960
LNILQSTHMAS++ITEE VYLCTGNPLPKDIEQISYWLLNE+FA SF +IS MK RKGLA
Sbjct: 241 LNILQSTHMASKKITEEEVYLCTGNPLPKDIEQISYWLLNESFAESFKQISNMKGRKGLA 300
Query: 961 LVDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSAL 1140
LVDI+REVTMFVFKI+MP+D RVQLIND+ADIEYRLSFGC+DKLQLG+LIASFTKAR++L
Sbjct: 301 LVDIVREVTMFVFKIKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLIASFTKARASL 360
Query: 1141 VAAAK 1155
VAAAK
Sbjct: 361 VAAAK 365
>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
family protein [Populus trichocarpa]
Length = 363
Score = 587 bits (1512), Expect = e-165
Identities = 298/362 (82%), Positives = 330/362 (91%), Gaps = 3/362 (0%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD---GKSTLWVEKYRPQSLADVAAHRDI 246
MA+ ++ MD+D N PNKGK VVVP GK+T WVEKYRPQSLADVAAHRDI
Sbjct: 1 MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60
Query: 247 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 426
IDTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVV
Sbjct: 61 IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120
Query: 427 RQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 606
R+QIQDFASTQSFSFG+K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+V
Sbjct: 121 RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 607 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALN 786
NK+I ALQSRCTRFRFAPLDP+HV ERLKHVI+AEGLDV ESGL AL LS GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240
Query: 787 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALV 966
ILQSTHMASQQITEE VYLCTGNPLP+D++QI++WLLNE+FA S+ +ISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300
Query: 967 DIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVA 1146
DI+REVTMFVFKI+M +DIRV LIND+ADIEYRLSFGC+DKLQLG+LIASFT+ARSALVA
Sbjct: 301 DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA 360
Query: 1147 AA 1152
AA
Sbjct: 361 AA 362
>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 361
Score = 586 bits (1511), Expect = e-165
Identities = 300/363 (82%), Positives = 330/363 (90%), Gaps = 4/363 (1%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRD 243
MA T PMD+D+ T T +P+KGK+VV G+ GK+ WVEKYRPQSL DVAAHRD
Sbjct: 1 MAQTTHPMDIDDHTY---TASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRD 57
Query: 244 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 423
I+DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDV
Sbjct: 58 IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDV 117
Query: 424 VRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 603
VRQQIQDFASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+
Sbjct: 118 VRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 177
Query: 604 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKAL 783
VNK+I ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGLAA VRLS GDMRKAL
Sbjct: 178 VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKAL 237
Query: 784 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLAL 963
NILQSTHMASQQITEEAVYLCTGNPLPKDIE ISYWLLNE FA SF +I EMKTRKGLAL
Sbjct: 238 NILQSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLAL 297
Query: 964 VDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALV 1143
+DI+REVTMFVFKI+MP+ +RVQL+ND+ADIEYRLSFGC+DKLQLG++IASFT+ARSALV
Sbjct: 298 IDIVREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALV 357
Query: 1144 AAA 1152
AAA
Sbjct: 358 AAA 360
>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
arietinum]
Length = 363
Score = 582 bits (1500), Expect = e-163
Identities = 293/357 (82%), Positives = 327/357 (91%), Gaps = 4/357 (1%)
Frame = +1
Query: 94 PMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRDIIDTID 261
PMD+D T + + NP+KGK V+ + GKSTLWVEKYRPQSL DVAAHRDI+DTID
Sbjct: 8 PMDIDQTNSFSS--NPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTID 65
Query: 262 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQIQ 441
RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVRQQIQ
Sbjct: 66 RLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 125
Query: 442 DFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKVIS 621
DFASTQS SFG K VKL+LLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+VNK+I
Sbjct: 126 DFASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQ 185
Query: 622 ALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNILQST 801
ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGL+ALVRLS GDMRKALNILQST
Sbjct: 186 ALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQST 245
Query: 802 HMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVDIIRE 981
HMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE ++ S+ +I ++KTRKGLAL+DI+RE
Sbjct: 246 HMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVRE 305
Query: 982 VTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAAA 1152
VTMFVFKI+MP +RVQL+ND+ADIEYRLSFGC+DKLQLG++IASFT+ARSALVAAA
Sbjct: 306 VTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 362
>ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-like isoform X2 [Cicer
arietinum]
Length = 364
Score = 577 bits (1488), Expect = e-162
Identities = 293/358 (81%), Positives = 327/358 (91%), Gaps = 5/358 (1%)
Frame = +1
Query: 94 PMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRDIIDTID 261
PMD+D T + + NP+KGK V+ + GKSTLWVEKYRPQSL DVAAHRDI+DTID
Sbjct: 8 PMDIDQTNSFSS--NPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTID 65
Query: 262 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQIQ 441
RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVRQQIQ
Sbjct: 66 RLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 125
Query: 442 DFASTQSFSFGS-KSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKVI 618
DFASTQS SFG K VKL+LLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+VNK+I
Sbjct: 126 DFASTQSLSFGFVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 185
Query: 619 SALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNILQS 798
ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGL+ALVRLS GDMRKALNILQS
Sbjct: 186 QALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQS 245
Query: 799 THMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVDIIR 978
THMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE ++ S+ +I ++KTRKGLAL+DI+R
Sbjct: 246 THMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVR 305
Query: 979 EVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAAA 1152
EVTMFVFKI+MP +RVQL+ND+ADIEYRLSFGC+DKLQLG++IASFT+ARSALVAAA
Sbjct: 306 EVTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 363
>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 363
Score = 576 bits (1485), Expect = e-162
Identities = 296/363 (81%), Positives = 328/363 (90%), Gaps = 4/363 (1%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRD 243
MA+T MD+D+ + T P+K K+VVV + GK+ WVEKYRP SL DVAAHRD
Sbjct: 1 MAETNHHMDIDSDDHTY-TARPDKAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRD 59
Query: 244 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 423
I+DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDV
Sbjct: 60 IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDV 119
Query: 424 VRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 603
VRQQIQDFASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+
Sbjct: 120 VRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 179
Query: 604 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKAL 783
VNK+I ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGLAALVRLS GDMRKAL
Sbjct: 180 VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKAL 239
Query: 784 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLAL 963
NILQSTHMASQQITEE VYLCTGNPLPKDIEQISYWLLNE FA SF +I EMKTRKGLAL
Sbjct: 240 NILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLAL 299
Query: 964 VDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALV 1143
VDI+REVT+FVFKI+MP+ +RVQL+ND+ADIEYRLSFGC+DKLQLG++IASF++ARSALV
Sbjct: 300 VDIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALV 359
Query: 1144 AAA 1152
AAA
Sbjct: 360 AAA 362
>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
gi|449499057|ref|XP_004160708.1| PREDICTED: replication
factor C subunit 5-like [Cucumis sativus]
Length = 363
Score = 575 bits (1481), Expect = e-161
Identities = 289/363 (79%), Positives = 328/363 (90%), Gaps = 3/363 (0%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPG---DGKSTLWVEKYRPQSLADVAAHRDI 246
M++ +S MD+D+ +N KGKNV P +GK+ WVEK+RP+SLADVAAHRDI
Sbjct: 1 MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI 60
Query: 247 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 426
+DTID+LTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG +HNMILELNASD+RGIDVV
Sbjct: 61 VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120
Query: 427 RQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 606
RQQIQDFASTQSFSFG+K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+V
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 607 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALN 786
NK+I ALQSRCTRFRFAPLD HVTERL++VI+AE LDVTE GLAALVRL TGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALN 240
Query: 787 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALV 966
ILQSTHMASQ ITEEAVYLCTGNP+PKDIEQIS+WLLNE F+ SF +ISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300
Query: 967 DIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVA 1146
DI+REVT+FVFKI MP++IRVQLIND+ADIEYR++FGC+DKLQLG+LI+SFT ARSALV
Sbjct: 301 DIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVG 360
Query: 1147 AAK 1155
AA+
Sbjct: 361 AAQ 363
>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
gi|355491087|gb|AES72290.1| Replication factor C subunit
[Medicago truncatula]
Length = 355
Score = 572 bits (1473), Expect = e-160
Identities = 291/363 (80%), Positives = 324/363 (89%), Gaps = 4/363 (1%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRD 243
MA+ MD+D T +KGK V+ G+ GK++LWVEKYRPQSL DVAAHRD
Sbjct: 1 MAEETYAMDIDVT---------DKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRD 51
Query: 244 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 423
I+DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDV
Sbjct: 52 IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDV 111
Query: 424 VRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 603
VRQQIQDFASTQS SFG K VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+
Sbjct: 112 VRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 171
Query: 604 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKAL 783
VNK+I ALQSRCTRFRFAPLD +HVTERLKHVI AE LDV +SGL+ALVRLS GDMRKAL
Sbjct: 172 VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKAL 231
Query: 784 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLAL 963
NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE ++ SF +I +MKTRKGLAL
Sbjct: 232 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLAL 291
Query: 964 VDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALV 1143
+DI+REVTMFVFKI MP+ +RVQL+ND+ADIEYRLSFGC+DKLQLG+++ASFT+ARSA+V
Sbjct: 292 IDIVREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMV 351
Query: 1144 AAA 1152
AAA
Sbjct: 352 AAA 354
>ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-like [Solanum lycopersicum]
Length = 357
Score = 571 bits (1471), Expect = e-160
Identities = 287/360 (79%), Positives = 326/360 (90%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDIIDT 255
MA+T+S MD+D+ P+KGKN+V + KS WVEK+RPQSL+DVAAHRDI++T
Sbjct: 1 MAETISSMDIDDDKIDT---KPSKGKNIVSNTEPKSVPWVEKFRPQSLSDVAAHRDIVET 57
Query: 256 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQ 435
IDRL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q NM+LELNASD+RGIDVVRQQ
Sbjct: 58 IDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMQNMVLELNASDDRGIDVVRQQ 117
Query: 436 IQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKV 615
IQDFASTQS SFG+KS VKLVLLDEADAMTKDAQFALRRVIE+YT++TRFALICNNVNKV
Sbjct: 118 IQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIERYTRNTRFALICNNVNKV 177
Query: 616 ISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNILQ 795
I ALQSRCTRFRFAPLD +HV+ERLKHV++AE LDV E GL ALVRLS GDMRKALNILQ
Sbjct: 178 IPALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQ 237
Query: 796 STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVDII 975
STHMASQQI+E+AVYLCTGNPLPKDIEQISYWLLNE FA S +ISE+KTRKGLALVDI+
Sbjct: 238 STHMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIV 297
Query: 976 REVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAAAK 1155
REVTMFVFKI+MP ++RVQLIN+MADIEYRL+FGC+DKLQLG+LI++FT+ARSALVAAAK
Sbjct: 298 REVTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357
>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-like [Solanum tuberosum]
Length = 357
Score = 570 bits (1470), Expect = e-160
Identities = 286/360 (79%), Positives = 324/360 (90%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDIIDT 255
MA+T+S MD+D+ PN GKN+V + +S WVEK+RPQSL+DVAAHRDI++T
Sbjct: 1 MAETISLMDIDDDKIDT---KPNNGKNIVSNTEPRSVPWVEKFRPQSLSDVAAHRDIVET 57
Query: 256 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQ 435
IDRL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASD+RGIDVVRQQ
Sbjct: 58 IDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQ 117
Query: 436 IQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKV 615
IQDFASTQS SFG+KS VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFAL+CNNVNKV
Sbjct: 118 IQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFALVCNNVNKV 177
Query: 616 ISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNILQ 795
I ALQSRCTRFRFAPLD +HV+ERLKHV++AE LDV E GL ALVRLS GDMRKALNILQ
Sbjct: 178 IPALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQ 237
Query: 796 STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVDII 975
STHMASQQI+E+AVYLCTGNPLPKDIEQISYWLLNE F S +ISE+KTRKGLALVDI+
Sbjct: 238 STHMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFTISCKRISEIKTRKGLALVDIV 297
Query: 976 REVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAAAK 1155
REVTMFVFKI+MP +RVQLIN+MADIEYRL+FGC+DKLQLG+LI++FT+ARSALVAAAK
Sbjct: 298 REVTMFVFKIKMPATVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357
>ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutrema salsugineum]
gi|557086521|gb|ESQ27373.1| hypothetical protein
EUTSA_v10018756mg [Eutrema salsugineum]
Length = 361
Score = 561 bits (1447), Expect = e-157
Identities = 293/364 (80%), Positives = 325/364 (89%), Gaps = 4/364 (1%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNP-NKGKNVVV---PGDGKSTLWVEKYRPQSLADVAAHRD 243
M D S MD+D N + P NKGK++ P K+T WVEKYRPQSL DVAAHRD
Sbjct: 1 MTDITSAMDID--VDENHSRKPSNKGKDIAGFGGPPQSKATPWVEKYRPQSLDDVAAHRD 58
Query: 244 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 423
IIDTIDRLT+ENKLPHLLLYGPPGTGKTSTILAVARKLYG ++ NMILELNASD+RGIDV
Sbjct: 59 IIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDV 118
Query: 424 VRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 603
VRQQIQDFASTQSFS G KS VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALI N+
Sbjct: 119 VRQQIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNH 177
Query: 604 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKAL 783
VNK+I ALQSRCTRFRFAPLDP+HV++RLKHVI+AEGLDV+ESGLAALVRLS GDMRKA+
Sbjct: 178 VNKIIPALQSRCTRFRFAPLDPVHVSQRLKHVIEAEGLDVSESGLAALVRLSNGDMRKAM 237
Query: 784 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLAL 963
NILQST+MAS++ITEE VYLCTGNPLP DIEQIS+WLLNE FA S+ ISEMKTRKGLA+
Sbjct: 238 NILQSTNMASEKITEEEVYLCTGNPLPMDIEQISHWLLNEPFAESYKNISEMKTRKGLAI 297
Query: 964 VDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALV 1143
VDI+REVTMFVFKI MP+++RVQLIND+ADIEYRLSFGC+DKLQLGA+I++FT ARSALV
Sbjct: 298 VDIVREVTMFVFKISMPSNVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFTHARSALV 357
Query: 1144 AAAK 1155
AAAK
Sbjct: 358 AAAK 361
>gb|EOY16353.1| Replication factor C / DNA polymerase III gamma-tau subunit
[Theobroma cacao]
Length = 436
Score = 558 bits (1437), Expect = e-156
Identities = 305/436 (69%), Positives = 334/436 (76%), Gaps = 76/436 (17%)
Frame = +1
Query: 76 MADTMSPMDVD---NTTASNPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDI 246
MA+ +S MD+D N N + +KGKNVV D K+T WVEKYRPQSLADVAAHRDI
Sbjct: 1 MAEVVSLMDIDEDDNHQKENHSRKLSKGKNVVTTNDTKATPWVEKYRPQSLADVAAHRDI 60
Query: 247 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 426
+DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG +HNMILELNASDERGIDVV
Sbjct: 61 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDERGIDVV 120
Query: 427 RQQIQDFASTQSFSFG---------------------------------SKSHVKLVLLD 507
RQQIQDFASTQSFSFG +KS VKL+LLD
Sbjct: 121 RQQIQDFASTQSFSFGVAVQNLTLHKLVVVVISIWLLSSIAAENALGCLAKSSVKLILLD 180
Query: 508 EADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKVISALQSRCTRFRFAPLDPIHVTER 687
EADAMTKDAQFALRRVIEKYTK+TRFALICN+VNK+I ALQSRCTRFRFAPLDPIHVTER
Sbjct: 181 EADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPIHVTER 240
Query: 688 LKHVIQAEG-----------------LDVTESGLAALVRLSTGDMRKALNILQ------- 795
LK+VI+AE LDV + GLAALVRLS GDMRKALNILQ
Sbjct: 241 LKNVIEAERHVFCFLMSLFCAHSVDLLDVPDCGLAALVRLSNGDMRKALNILQSFCLAVR 300
Query: 796 ----------------STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSK 927
STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE+FA SF +
Sbjct: 301 IVTEKEGRVEMLNILLSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAESFKR 360
Query: 928 ISEMKTRKGLALVDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGAL 1107
ISE+KTRKGLALVDI+REVTMFVFKI+MP+D+RVQLIND+ADIEY LSFGC+DKLQLG+L
Sbjct: 361 ISEIKTRKGLALVDIVREVTMFVFKIKMPSDVRVQLINDLADIEYHLSFGCNDKLQLGSL 420
Query: 1108 IASFTKARSALVAAAK 1155
IA+FT+ARSALVAAAK
Sbjct: 421 IATFTRARSALVAAAK 436
>ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-like [Fragaria vesca subsp.
vesca]
Length = 363
Score = 558 bits (1437), Expect = e-156
Identities = 287/364 (78%), Positives = 322/364 (88%), Gaps = 4/364 (1%)
Frame = +1
Query: 76 MADTMSPMDVDNTTASNPTLNPN--KGKNVVVPGD--GKSTLWVEKYRPQSLADVAAHRD 243
MA+ ++PMD+D + +L PN KGKNV V G G++T WVEKYRPQSLADVAAHRD
Sbjct: 1 MAELITPMDIDGDDTNPSSLKPNNDKGKNVAVSGPIHGEATPWVEKYRPQSLADVAAHRD 60
Query: 244 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 423
I+DTIDRL SEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+ +ILELNASD+RGIDV
Sbjct: 61 IVDTIDRLASENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRKIILELNASDDRGIDV 120
Query: 424 VRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 603
VRQQIQ+FAS+Q K VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRF LICN+
Sbjct: 121 VRQQIQNFASSQGLET-EKVPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNH 179
Query: 604 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKAL 783
VNK+I ALQSRCTRFRFAPLD HV +RLKHVI AEGLDV E+GLAA+VRLS GDMRKAL
Sbjct: 180 VNKIIPALQSRCTRFRFAPLDSFHVKDRLKHVIDAEGLDVFENGLAAVVRLSNGDMRKAL 239
Query: 784 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLAL 963
NILQSTHMASQ+ITEEAVYLCTGNPLPKDIEQIS+WLLNE+F +F +IS+MKT KGLAL
Sbjct: 240 NILQSTHMASQKITEEAVYLCTGNPLPKDIEQISHWLLNESFTEAFKRISDMKTIKGLAL 299
Query: 964 VDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALV 1143
VDI+REVTMFVFKI+MP D+RV LIND+ADIEYRLSFGC+DKLQLG++IA+FTKARSALV
Sbjct: 300 VDIVREVTMFVFKIKMPPDVRVLLINDLADIEYRLSFGCNDKLQLGSIIATFTKARSALV 359
Query: 1144 AAAK 1155
AAAK
Sbjct: 360 AAAK 363
>gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
Length = 359
Score = 556 bits (1433), Expect = e-156
Identities = 284/360 (78%), Positives = 319/360 (88%), Gaps = 4/360 (1%)
Frame = +1
Query: 85 TMSPMDVDNTTASNPTLNPNKGKNVV----VPGDGKSTLWVEKYRPQSLADVAAHRDIID 252
T PM++D+ + + G+ V+ +P K+ WVEKYRPQSL DVAAHRDI+D
Sbjct: 2 TTHPMEIDSDGDDH---THSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVD 58
Query: 253 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQ 432
TID+LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG++F NMILELNASD+RGIDVVRQ
Sbjct: 59 TIDKLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQ 118
Query: 433 QIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNK 612
QIQDFASTQS SFG K VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+VNK
Sbjct: 119 QIQDFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 178
Query: 613 VISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNIL 792
+I ALQSRCTRFRFAPLD +HVTER+KHVI+AEGLDV + GL ALVRLS GDMRKALNIL
Sbjct: 179 IIPALQSRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNIL 238
Query: 793 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVDI 972
QSTHMA+QQITEEA+YLCTGNPLPKDIEQISYWLLNE + SF +I EMKTRKGLALVDI
Sbjct: 239 QSTHMATQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDI 298
Query: 973 IREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAAA 1152
IREV MFVFKI+MP+ +RVQL+ND+ADIEYRLSFGC+DKLQLG++IASFT+ARSALVAAA
Sbjct: 299 IREVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 358
>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
Full=Replication factor C subunit 3; Short=OsRFC3;
AltName: Full=Activator 1 subunit 3
gi|46805779|dbj|BAD17147.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|46806135|dbj|BAD17365.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218191668|gb|EEC74095.1| hypothetical protein
OsI_09136 [Oryza sativa Indica Group]
Length = 361
Score = 553 bits (1425), Expect = e-155
Identities = 283/360 (78%), Positives = 321/360 (89%), Gaps = 2/360 (0%)
Frame = +1
Query: 79 ADTMSPMDVDNTTASNPTLNPNKGKNVV--VPGDGKSTLWVEKYRPQSLADVAAHRDIID 252
A +PMD+D A+ P KGK + PG G++ WVEKYRPQSL DVAAHRDI+D
Sbjct: 4 ATAATPMDID--AAAPPPGAAAKGKAPLSSTPG-GRAAPWVEKYRPQSLGDVAAHRDIVD 60
Query: 253 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQ 432
TIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASDERGIDVVRQ
Sbjct: 61 TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQ 120
Query: 433 QIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNK 612
QIQDFAS +S SFG+K VK+VLLDEADAMTKDAQFALRRVIEK+T+STRFALICN+VNK
Sbjct: 121 QIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNK 180
Query: 613 VISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNIL 792
+I ALQSRCTRFRFAPLD HV ERLKH+IQ+EGLDV + GL ALVRLS GDMRKALNIL
Sbjct: 181 IIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNIL 240
Query: 793 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSKISEMKTRKGLALVDI 972
QSTHMAS+QITEEAVYLCTGNP+PKDIEQI+YWLLNE+F+TSF IS+MK RKGLALVDI
Sbjct: 241 QSTHMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDI 300
Query: 973 IREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARSALVAAA 1152
IREVTMFVFKI+MP+D+R++LIND+ADIEYRLSF C+DKLQLGALI++FT AR+A+VAAA
Sbjct: 301 IREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360
>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
Length = 367
Score = 548 bits (1411), Expect = e-153
Identities = 283/366 (77%), Positives = 321/366 (87%), Gaps = 8/366 (2%)
Frame = +1
Query: 79 ADTMSPMDVDNTTASNPTLNPNKGKNVV--VPGDGKSTLWVEKYRPQSLADVAAHRDIID 252
A +PMD+D A+ P KGK + PG G++ WVEKYRPQSL DVAAHRDI+D
Sbjct: 4 ATAATPMDID--AAAPPPGAAAKGKAPLSSTPG-GRAAPWVEKYRPQSLGDVAAHRDIVD 60
Query: 253 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQ 432
TIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASDERGIDVVRQ
Sbjct: 61 TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQ 120
Query: 433 QIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNK 612
QIQDFAS +S SFG+K VK+VLLDEADAMTKDAQFALRRVIEK+T+STRFALICN+VNK
Sbjct: 121 QIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNK 180
Query: 613 VISALQSRCTRFRFAPLDPIHVTERLKHVIQAEGLDVTESGLAALVRLSTGDMRKALNIL 792
+I ALQSRCTRFRFAPLD HV ERLKH+IQ+EGLDV + GL ALVRLS GDMRKALNIL
Sbjct: 181 IIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNIL 240
Query: 793 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSF------SKISEMKTRKG 954
QSTHMAS+QITEEAVYLCTGNP+PKDIEQI+YWLLNE+F+TSF IS+MK RKG
Sbjct: 241 QSTHMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCILNYQSISDMKMRKG 300
Query: 955 LALVDIIREVTMFVFKIRMPTDIRVQLINDMADIEYRLSFGCSDKLQLGALIASFTKARS 1134
LALVDIIREVTMFVFKI+MP+D+R++LIND+ADIEYRLSF C+DKLQLGALI++FT AR+
Sbjct: 301 LALVDIIREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGART 360
Query: 1135 ALVAAA 1152
A+VAAA
Sbjct: 361 AMVAAA 366