BLASTX nr result
ID: Achyranthes22_contig00039201
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00039201
(1820 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 153 2e-34
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16... 110 2e-33
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus] 117 4e-33
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 108 5e-33
gb|AGU70133.1| CRK [Cleome hassleriana] 139 9e-33
emb|CAN77201.1| hypothetical protein VITISV_002545 [Vitis vinifera] 107 2e-32
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 110 3e-32
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 106 3e-31
emb|CAN83010.1| hypothetical protein VITISV_010102 [Vitis vinifera] 113 4e-31
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc... 106 6e-31
emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera] 114 8e-31
emb|CAN62437.1| hypothetical protein VITISV_010848 [Vitis vinifera] 116 1e-30
gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group] ... 103 2e-30
gb|ABI34306.1| Polyprotein, putative [Solanum demissum] 113 3e-30
emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera] 110 5e-30
emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group] 105 8e-30
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 108 1e-29
gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group] 103 2e-29
gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subc... 103 2e-29
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group] 102 5e-29
>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 153 bits (387), Expect = 2e-34
Identities = 92/200 (46%), Positives = 127/200 (63%), Gaps = 7/200 (3%)
Frame = -1
Query: 908 GINYIDTYSLLVE--SLSLDFNHSF*H*TCNSPNGCQNDILE**IERGGIYETTYRFVVK 735
GI+Y DTY+ +V S+ L + H + L +E + FV+
Sbjct: 835 GIDYFDTYAPVVRISSIRLLIGLASIHNLVIHQMDVKTAFLNGVLEEEVYMKQPEGFVMP 894
Query: 734 GHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN-----V*L 570
G+E+KVCKL++ LY LK+APK W+Q FDE VL+N F++NQS++C+YS +D+ + L
Sbjct: 895 GNEHKVCKLVKSLYGLKQAPKQWHQRFDEAVLSNGFELNQSDKCLYSKFDDSGNGVIICL 954
Query: 569 YFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCIQNV 390
Y DDMLIF TNL Q+E TK+FLSS+F MKDMGEA VI GI IK+ N ++L Q + I+ V
Sbjct: 955 YVDDMLIFGTNLRQVELTKEFLSSNFAMKDMGEAEVILGIRIKRENKGISLTQSHYIEKV 1014
Query: 389 LKGFNKDKNSHMSTIIDPSV 330
LK FN + S +ST +D SV
Sbjct: 1015 LKKFNYENCSPVSTPMDASV 1034
>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
gag/pol protein [Zea mays]
Length = 1279
Score = 110 bits (274), Expect(3) = 2e-33
Identities = 62/144 (43%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
F+ G ENKVC+LI+ LY LK+APK W++ FD + A F +N+S+ CVY
Sbjct: 900 FIADGQENKVCRLIKSLYGLKQAPKQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVM 959
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGIN-IKKVNCPLTLAQIYC 402
+ LY DD+LIF +NL +E+ K LSS+F MKD+GEA VI I ++K + +TL Q +
Sbjct: 960 LCLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEADVILNIKLVRKADGGVTLLQSHY 1019
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSV 330
++ VL F T DPSV
Sbjct: 1020 VEKVLSRFGFSDCDPAPTPYDPSV 1043
Score = 50.4 bits (119), Expect(3) = 2e-33
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -2
Query: 838 SIKLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
S L+IHQMDVK FLN +L+EE+YM QP G ++ G + K
Sbjct: 869 SYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENK 908
Score = 31.6 bits (70), Expect(3) = 2e-33
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGHC 170
V LSR+ + P W TM YG+ + G VLEG+C
Sbjct: 1080 VSKLSRFVSKPGDDHWCALERVLRYLKGTMTYGIHYTGNPKVLEGYC 1126
>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
Length = 1358
Score = 117 bits (293), Expect(3) = 4e-33
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
FV+ G ENKVC+LI+ LY LK+APK W++ FD V A F+ N ++ C+Y+
Sbjct: 981 FVMPGQENKVCRLIKSLYGLKQAPKQWHERFDTTVTAFGFRHNSADRCIYTKCEPGYTVV 1040
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCI 399
+ LY DDMLI T+L + +TKK+LS +F MKD+GE I GI +K+ ++L+Q + I
Sbjct: 1041 ICLYVDDMLIISTHLEGISETKKYLSLNFKMKDLGEVDTILGIKVKRAGSQISLSQSHYI 1100
Query: 398 QNVLKGFNKDKNSHMSTIIDPSVK 327
+ +L F +T DPSVK
Sbjct: 1101 EKILTKFQHLNIKEFNTPFDPSVK 1124
Score = 48.9 bits (115), Expect(3) = 4e-33
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -2
Query: 853 LITLFSIK-LVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
LI + ++K L IHQMDVK FLN LNEE+Y++QP G + G + K
Sbjct: 944 LIAVSALKGLYIHQMDVKTAFLNGYLNEEIYLEQPEGFVMPGQENK 989
Score = 24.6 bits (52), Expect(3) = 4e-33
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LS+Y+ NP W +T + LT+ + +LEG+
Sbjct: 1160 VSKLSQYTVNPGTEHWKAVGRVLGYLKRTSNLELTYTSSSRILEGY 1205
>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 108 bits (270), Expect(3) = 5e-33
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
F+ G ENKVC+LI+ LY LK+APK W++ FD + A F +N+S+ CVY
Sbjct: 940 FIADGQENKVCRLIKSLYGLKQAPKQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVM 999
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGIN-IKKVNCPLTLAQIYC 402
+ LY DD+LIF +NL +E+ K LSS+F MKD+GEA VI I +++ + +TL Q +
Sbjct: 1000 LCLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEADVILNIKLVREADGGVTLLQSHY 1059
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSV 330
++ VL F T DPSV
Sbjct: 1060 VEKVLSRFGFSDCDPAPTPYDPSV 1083
Score = 50.4 bits (119), Expect(3) = 5e-33
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -2
Query: 838 SIKLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
S L+IHQMDVK FLN +L+EE+YM QP G ++ G + K
Sbjct: 909 SYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENK 948
Score = 31.6 bits (70), Expect(3) = 5e-33
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGHC 170
V LSR+ + P W TM YG+ + G VLEG+C
Sbjct: 1120 VSKLSRFVSKPGDDHWRALERVLRYLKGTMTYGIHYTGNPKVLEGYC 1166
>gb|AGU70133.1| CRK [Cleome hassleriana]
Length = 250
Score = 139 bits (349), Expect(2) = 9e-33
Identities = 72/145 (49%), Positives = 102/145 (70%), Gaps = 5/145 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
F++ G +KVCKL++ LY LK+APK W+Q FD++VLAN F++NQS++CVYS ++N
Sbjct: 90 FILSGQAHKVCKLVKSLYGLKQAPKQWHQKFDDVVLANGFRLNQSDKCVYSRFDNNGHEV 149
Query: 578 -V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYC 402
+ LY DDM+IF T L Q++KTK FLSS F MKD+GEA VI I IK+ +TL+Q +
Sbjct: 150 IICLYVDDMIIFGTELEQVKKTKNFLSSKFSMKDLGEADVILDIRIKRDQGSITLSQSHY 209
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSVK 327
++ VLK F+ ++ ST +D S K
Sbjct: 210 VEKVLKRFDVFESPPTSTPMDCSAK 234
Score = 30.4 bits (67), Expect(2) = 9e-33
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 823 IHQMDVKMTFLNSKLNEE-VYMKQPIGLLSKGMKTK 719
I + +++ FLN L EE VYMKQP G + G K
Sbjct: 63 IFKKKMRVVFLNGDLEEEEVYMKQPEGFILSGQAHK 98
>emb|CAN77201.1| hypothetical protein VITISV_002545 [Vitis vinifera]
Length = 515
Score = 107 bits (266), Expect(3) = 2e-32
Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Frame = -1
Query: 743 VVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN----V 576
VV E KVCKL++ LY LK+APK W FD +++ N + IN +++C+YS DN +
Sbjct: 198 VVPRKEKKVCKLVKSLYGLKQAPKQWRNKFDHVLVTNGYSINDADKCIYSKYEDNTCVVI 257
Query: 575 *LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCIQ 396
LY DDMLIF T+L + +TKKFLS F MK++ +A VI GI I + L L+Q + ++
Sbjct: 258 YLYVDDMLIFGTSLEIVCETKKFLSPKFDMKNLEKAEVILGIKITRPPNELKLSQEHYVE 317
Query: 395 NVLKGFNKDKNSHMSTIIDP 336
+L+ F +ST DP
Sbjct: 318 KILRKFEHFYCKLVSTPYDP 337
Score = 52.0 bits (123), Expect(3) = 2e-32
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = -2
Query: 856 ILITLFSI-KLVIHQMDVKMTFLNSKLNEEVYMKQPIG 746
+LITL SI LVIHQMDVK TFLN L EE+YM+QP G
Sbjct: 159 VLITLASIHNLVIHQMDVKTTFLNGDLEEEIYMEQPEG 196
Score = 29.6 bits (65), Expect(3) = 2e-32
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEG 176
V LSRY+ +P W T++YGL F G VLEG
Sbjct: 376 VGRLSRYTQSPNQDHWTIVRRVLKYLRGTINYGLCFCGFPSVLEG 420
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 110 bits (275), Expect(3) = 3e-32
Identities = 60/140 (42%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
F G E KVCKL++ LY LK+APK W++ FD ++L++ FKIN+ ++CVY ++
Sbjct: 898 FSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVI 957
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCI 399
V LY DDMLI ++ + TK L+S F MKDMG A VI GI IK+ + L L+Q + +
Sbjct: 958 VCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSBELILSQSHYV 1017
Query: 398 QNVLKGFNKDKNSHMSTIID 339
+L F+KD + T +D
Sbjct: 1018 DKILGKFDKDNSGVARTPVD 1037
Score = 46.2 bits (108), Expect(3) = 3e-32
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -2
Query: 829 LVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
L IHQMDVK FLN L+EE+YM+QP G + G + K
Sbjct: 870 LEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKK 906
Score = 31.2 bits (69), Expect(3) = 3e-32
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LSRY++NP W T DYGL + VLEG+
Sbjct: 1077 VSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGY 1122
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 106 bits (265), Expect(3) = 3e-31
Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 4/142 (2%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
FVVKG E+KVC+LI+ LY LK+AP+ W++ F+ + F +N++++CVY +
Sbjct: 931 FVVKGQESKVCRLIKSLYGLKQAPRQWHEKFNNTLTTAGFCVNEADKCVYYRFSGGKGVI 990
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCI 399
+ LY DD+LIF T+L + +TK FLS +F MKD+GEA VI I + K +TL+Q + +
Sbjct: 991 MCLYVDDILIFGTDLEAIMETKLFLSKNFDMKDLGEADVILNIKLIKGEDGITLSQSHYV 1050
Query: 398 QNVLKGFNKDKNSHMSTIIDPS 333
+ V+ F ++T DPS
Sbjct: 1051 EKVMTRFGHMDCKPVTTPYDPS 1072
Score = 52.8 bits (125), Expect(3) = 3e-31
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = -2
Query: 856 ILITLFSIKLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
+L + KL++HQMDVK FLN +L EE+YM+QP G + KG ++K
Sbjct: 894 LLALAAAYKLLVHQMDVKTAFLNGELEEEIYMQQPEGFVVKGQESK 939
Score = 25.0 bits (53), Expect(3) = 3e-31
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEG 176
V L+RYS +P W M+ G+ + G VLEG
Sbjct: 1110 VCRLARYSASPGDRHWVALYRVLRYLKGAMNLGIKYTGFPSVLEG 1154
>emb|CAN83010.1| hypothetical protein VITISV_010102 [Vitis vinifera]
Length = 569
Score = 113 bits (282), Expect(2) = 4e-31
Identities = 62/144 (43%), Positives = 93/144 (64%), Gaps = 4/144 (2%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
FV G+ENKVCKL++ LY LK+APK W++ FD ++L++ F+ N ++C+YS DN
Sbjct: 127 FVQLGNENKVCKLVKSLYGLKQAPKKWHEKFDHVILSDGFRHNNVDKCLYSKTCDNYMVI 186
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCI 399
V LY DDMLI ++ + +TK+FLSS+F MKD+GE +I GI +K+ + L Q + I
Sbjct: 187 VCLYVDDMLILSDDMKGIIETKRFLSSTFKMKDLGEVDIILGIKVKRNSGGYALNQTHYI 246
Query: 398 QNVLKGFNKDKNSHMSTIIDPSVK 327
+ V+ F+ K +T D S+K
Sbjct: 247 EKVVSKFSL-KIKDANTPFDSSIK 269
Score = 50.8 bits (120), Expect(2) = 4e-31
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -2
Query: 856 ILITLFSI-KLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
IL L SI L +HQMDVK FLN LNEEVYM+QP G + G + K
Sbjct: 89 ILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVQLGNENK 135
>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1075
Score = 106 bits (265), Expect(3) = 6e-31
Identities = 56/144 (38%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDNV--- 576
FV+ G E+KVCKL + LY LK+AP W++ FD+ +++ F +N +++CVYS + ++
Sbjct: 813 FVIPGQEDKVCKLEKSLYGLKQAPMQWHEKFDKTLISAGFTVNDADKCVYSRFDGDIGVI 872
Query: 575 -*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCI 399
LY DD+LI TNL + + K +LS+ F MKD+GEA VI I I+K + L Q + +
Sbjct: 873 LCLYVDDILILGTNLNIISEIKSYLSNKFDMKDLGEAKVILNIKIQKKDKGFELNQSHYV 932
Query: 398 QNVLKGFNKDKNSHMSTIIDPSVK 327
+ +L F + +T DP +K
Sbjct: 933 EKLLHRFGHFNSKSTATPYDPCLK 956
Score = 45.8 bits (107), Expect(3) = 6e-31
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -2
Query: 823 IHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
IHQMDVK FLN +L EE+YM+QP G + G + K
Sbjct: 787 IHQMDVKTAFLNGELEEEIYMQQPDGFVIPGQEDK 821
Score = 31.2 bits (69), Expect(3) = 6e-31
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LSRYS+ P W TM+ GL ++G VLEG+
Sbjct: 992 VSRLSRYSSKPDSNHWHALERVLRYLKGTMNQGLFYSGFPAVLEGY 1037
>emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera]
Length = 484
Score = 114 bits (286), Expect(2) = 8e-31
Identities = 61/140 (43%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
Frame = -1
Query: 743 VVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN----V 576
VV E KVCKL++ LY LK+APK W+ FD +++ N + IN ++C+Y+ DN +
Sbjct: 48 VVPEREKKVCKLVKSLYGLKQAPKQWHNKFDHVLVTNGYSINDVDKCIYNKYEDNTCVVI 107
Query: 575 *LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCIQ 396
+Y DDMLIF T+L + +TKKFL S F MKD+GEA VI GI I + L L+Q + ++
Sbjct: 108 YIYVDDMLIFGTSLEVVCETKKFLGSKFDMKDLGEAEVILGIKITRTPNKLKLSQEHYVE 167
Query: 395 NVLKGFNKDKNSHMSTIIDP 336
+L+ F +ST DP
Sbjct: 168 KILRKFEHFDCKPVSTPYDP 187
Score = 48.1 bits (113), Expect(2) = 8e-31
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -2
Query: 856 ILITLFSI-KLVIHQMDVKMTFLNSKLNEEVYMKQPIG 746
+LI L SI LVIHQMDVK FLN L EE+YM+QP G
Sbjct: 9 VLIALASIHNLVIHQMDVKTAFLNGDLEEEIYMEQPKG 46
>emb|CAN62437.1| hypothetical protein VITISV_010848 [Vitis vinifera]
Length = 622
Score = 116 bits (290), Expect(2) = 1e-30
Identities = 62/141 (43%), Positives = 89/141 (63%), Gaps = 4/141 (2%)
Frame = -1
Query: 743 VVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN----V 576
VV G E KVCKL++ LY LK+APK W+ FD +++ N + IN +++C+Y+ DN +
Sbjct: 243 VVLGKEKKVCKLVKSLYGLKQAPKQWHNKFDHVLVTNGYSINDADKCIYNKYEDNTCVVI 302
Query: 575 *LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCIQ 396
LY DDMLIF T+L + +TKKFL F MKD+GEA VI GI I + L L+Q + ++
Sbjct: 303 CLYVDDMLIFGTSLEVVCETKKFLGPKFDMKDLGEAEVILGIKITRTPNELKLSQEHYVE 362
Query: 395 NVLKGFNKDKNSHMSTIIDPS 333
+L+ F +ST DP+
Sbjct: 363 KILRKFECFDCKLVSTPYDPN 383
Score = 46.2 bits (108), Expect(2) = 1e-30
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -2
Query: 856 ILITLFSI-KLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
+LI L SI LVIHQMDVK FLN L EE+YM+Q G + G + K
Sbjct: 204 VLIALASIHNLVIHQMDVKTAFLNGDLEEEIYMEQLEGRVVLGKEKK 250
>gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group]
gi|108708916|gb|ABF96711.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1456
Score = 103 bits (258), Expect(3) = 2e-30
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
+V++G E VCKL++ LY LK+APK W++ FD + + F +N++++CVY
Sbjct: 1077 YVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEGVI 1136
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVN-CPLTLAQIYC 402
+ LY DD+LIF T+L +E+ K +LS SF MKD+GEA VI IN+++ + +TL Q +
Sbjct: 1137 LCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNINLQRGDEGGITLVQSHY 1196
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSV 330
+ VL F T DPSV
Sbjct: 1197 VDKVLSRFGYSDCKPAPTPYDPSV 1220
Score = 46.2 bits (108), Expect(3) = 2e-30
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = -2
Query: 829 LVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMK 725
L++HQMDVK+ FLN +L EE+YM QP G + +G +
Sbjct: 1049 LLVHQMDVKIAFLNGELEEEIYMDQPDGYVLEGQE 1083
Score = 31.6 bits (70), Expect(3) = 2e-30
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LSR+ +NP QW TM YG+ + G VLEG+
Sbjct: 1257 VSKLSRFVSNPGDDQWQALERVMRYLKGTMSYGIHYTGYPKVLEGY 1302
>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
Length = 1691
Score = 113 bits (283), Expect(2) = 3e-30
Identities = 60/143 (41%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
FV G E+KVCKL + LY LK+APK W++ FD ++ N FK N+ ++C+Y +N
Sbjct: 917 FVEAGQESKVCKLTKSLYGLKQAPKQWHEKFDSCMIENGFKTNECDKCIYHKSWNNSHVI 976
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCI 399
+ LY DD+LIF +N+ +++TK L S F MKD+GEA VI GI I + + L Q + +
Sbjct: 977 ICLYVDDLLIFGSNINVIDETKNILRSHFDMKDLGEANVILGIKITRTCDGIFLDQSHYV 1036
Query: 398 QNVLKGFNKDKNSHMSTIIDPSV 330
+ +LK +N H++T D SV
Sbjct: 1037 EKILKKYNFLDCKHVATPFDSSV 1059
Score = 47.4 bits (111), Expect(2) = 3e-30
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -2
Query: 856 ILITLFSI-KLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
+LI + +I L IHQMDVK FLN LNEE+YM QP + G ++K
Sbjct: 879 LLIAMAAIFDLQIHQMDVKTAFLNGDLNEEIYMDQPESFVEAGQESK 925
>emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]
Length = 635
Score = 110 bits (276), Expect(2) = 5e-30
Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
Frame = -1
Query: 743 VVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN----V 576
VV G E KVCKL++ LY LK+APK W+ FD +++ N + IN +++C+Y+ DN +
Sbjct: 353 VVPGKEKKVCKLVKSLYGLKQAPKQWHNKFDHVLVTNGYSINDADKCIYNKYEDNTCVVI 412
Query: 575 *LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMG--EACVIFGINIKKVNCPLTLAQIYC 402
LY DDMLIF TNL + +TKKFL S F MK++G E VI GI I + L L+ +
Sbjct: 413 CLYVDDMLIFGTNLEVVCETKKFLGSKFDMKNLGEVEVEVILGIKIIRTPNELKLSXEHY 472
Query: 401 IQNVLKGFNKDKNSHMSTIIDPS 333
++ L+ F +ST DPS
Sbjct: 473 VEKTLRKFEHFDCKPVSTXYDPS 495
Score = 49.3 bits (116), Expect(2) = 5e-30
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -2
Query: 856 ILITLFSI-KLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
+L+ L SI LVIHQMDVK FLN L EE+YM QP G + G + K
Sbjct: 314 VLLALASIHNLVIHQMDVKTAFLNGDLEEEIYMDQPKGCVVPGKEKK 360
>emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group]
Length = 1099
Score = 105 bits (261), Expect(3) = 8e-30
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
+V++G E VCKL++ LY LK+APK W++ FD + + F +N++N+CVY+
Sbjct: 846 YVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEANKCVYNRYGGGEGVI 905
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVN-CPLTLAQIYC 402
+ LY DD+LIF T+L +E+ K +LS SF MKD+GEA VI I +++ + +TL Q +
Sbjct: 906 LCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLVQSHY 965
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSV 330
+ VL F T DPSV
Sbjct: 966 VDKVLSRFGYSDCKPAPTSYDPSV 989
Score = 45.4 bits (106), Expect(3) = 8e-30
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 829 LVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMK 725
L++HQMDVK FLN +L EE+YM QP G + +G +
Sbjct: 818 LLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQE 852
Score = 29.3 bits (64), Expect(3) = 8e-30
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LSR+ +NP W TM YG+ + G + +LEG+
Sbjct: 1026 VSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIYYTGYSKLLEGY 1071
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 108 bits (270), Expect(2) = 1e-29
Identities = 59/144 (40%), Positives = 90/144 (62%), Gaps = 4/144 (2%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
FV+ G+ENKVCKL++ LY LK+ PK W++ D +L++ F+ N ++C+YS D+
Sbjct: 871 FVLLGNENKVCKLVKSLYGLKQDPKQWHEKXDHXILSDGFRHNNVDKCLYSKTCDDYMVI 930
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVNCPLTLAQIYCI 399
V LY DDMLI ++ + +TK+FLSS+F MKD+GE I GI +K+ + L Q + I
Sbjct: 931 VCLYVDDMLILSDDMKGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSEGYALNQTHYI 990
Query: 398 QNVLKGFNKDKNSHMSTIIDPSVK 327
+ V+ F+ K +T D S+K
Sbjct: 991 EKVVSKFSHLKIKDANTPFDSSIK 1014
Score = 50.4 bits (119), Expect(2) = 1e-29
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -2
Query: 856 ILITLFSI-KLVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMKTK 719
IL L SI L +HQMDVK FLN LNEEVYM+QP G + G + K
Sbjct: 833 ILFALASIHNLFVHQMDVKTAFLNGBLNEEVYMEQPEGFVLLGNENK 879
>gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1138
Score = 103 bits (257), Expect(3) = 2e-29
Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
+V++G E VCKL++ LY LK+APK W++ FD + + F +N++++CVY
Sbjct: 790 YVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEVVI 849
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVN-CPLTLAQIYC 402
+ LY DD+LIF T+L +E+ K +LS SF MKD+GEA VI I +++ + +TL Q Y
Sbjct: 850 LCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLVQSYY 909
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSV 330
+ VL F T DPSV
Sbjct: 910 VDKVLSRFGYSDCKPAPTPYDPSV 933
Score = 45.4 bits (106), Expect(3) = 2e-29
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 829 LVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMK 725
L++HQMDVK FLN +L EE+YM QP G + +G +
Sbjct: 762 LLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQE 796
Score = 29.6 bits (65), Expect(3) = 2e-29
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LSR+ +NP W TM YG+ + G VLEG+
Sbjct: 970 VSKLSRFVSNPGDDHWQTLERVMRYLKGTMSYGIHYTGYPKVLEGY 1015
>gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1126
Score = 103 bits (257), Expect(3) = 2e-29
Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
+V++G E VCKL++ LY LK+APK W++ FD + + F +N++++CVY
Sbjct: 778 YVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEVVI 837
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVN-CPLTLAQIYC 402
+ LY DD+LIF T+L +E+ K +LS SF MKD+GEA VI I +++ + +TL Q Y
Sbjct: 838 LCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLVQSYY 897
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSV 330
+ VL F T DPSV
Sbjct: 898 VDKVLSRFGYSDCKPAPTPYDPSV 921
Score = 45.4 bits (106), Expect(3) = 2e-29
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 829 LVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMK 725
L++HQMDVK FLN +L EE+YM QP G + +G +
Sbjct: 750 LLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQE 784
Score = 29.6 bits (65), Expect(3) = 2e-29
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LSR+ +NP W TM YG+ + G VLEG+
Sbjct: 958 VSKLSRFVSNPGDDHWQTLERVMRYLKGTMSYGIHYTGYPKVLEGY 1003
>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
Length = 1413
Score = 102 bits (253), Expect(3) = 5e-29
Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Frame = -1
Query: 746 FVVKGHENKVCKLIRYLYELKKAPK*WYQNFDELVLANVFKINQSNECVYSLLNDN---- 579
+V++G E VCKL++ LY LK+APK W++ FD + + F +N++++CVY
Sbjct: 1034 YVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEGVI 1093
Query: 578 V*LYFDDMLIFRTNLGQMEKTKKFLSSSFPMKDMGEACVIFGINIKKVN-CPLTLAQIYC 402
+ LY DD+LIF T+L +E+ K +LS SF MKD+GEA VI I +++ + +TL Q +
Sbjct: 1094 LCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLVQSHY 1153
Query: 401 IQNVLKGFNKDKNSHMSTIIDPSV 330
+ VL F T DPSV
Sbjct: 1154 VDKVLSRFGYSDCKPAPTSYDPSV 1177
Score = 45.4 bits (106), Expect(3) = 5e-29
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 829 LVIHQMDVKMTFLNSKLNEEVYMKQPIGLLSKGMK 725
L++HQMDVK FLN +L EE+YM QP G + +G +
Sbjct: 1006 LLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQE 1040
Score = 29.6 bits (65), Expect(3) = 5e-29
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 310 VVHLSRYSNNPIIFQWXXXXXXXXXXXKTMDYGLTFNGGTLVLEGH 173
V LSR+ +NP W TM YG+ + G VLEG+
Sbjct: 1214 VSKLSRFVSNPGDDHWQALERVMRHLKGTMSYGIHYTGYPKVLEGY 1259