BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00039080
         (858 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21871.3| unnamed protein product [Vitis vinifera]               66   2e-08
ref|XP_003540925.1| PREDICTED: RNA polymerase II subunit 5-media...    65   3e-08
ref|XP_002338319.1| predicted protein [Populus trichocarpa]            62   3e-07

>emb|CBI21871.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
 Frame = +2

Query: 26  RDEIPDKDFSTLDQEKSEDHNHVKKLSD--SLSPPNDTDKLHRGTSYVLTGNKDESSHDK 199
           +DE    +     Q   ED  +  KL      S P D+D +  G S+     +  SSH K
Sbjct: 265 KDEYATTEELLSKQHFEEDFANQLKLEGLKEQSVPKDSDDVSHGKSFANRATQS-SSHGK 323

Query: 200 DILQNFVERSPDAEFIPSVAKTRDQSKSKSEVSVPAPKPDASNRLSRPSTDSLKAFTGSI 379
           D +Q                            ++P  K + S + S+P+TDSLKAFTGSI
Sbjct: 324 DNIQ----------------------------ALPTSKAETSVQSSKPATDSLKAFTGSI 355

Query: 380 IERTDNLPILPERETINA--PSNSQSSKPVSRFKQRR 484
           +E T N+ + P  +  ++   S SQ +KPVSRFK +R
Sbjct: 356 VEHTRNIQMNPREQAASSSQSSGSQPTKPVSRFKMQR 392


>ref|XP_003540925.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X1 [Glycine max]
           gi|571493087|ref|XP_006592441.1| PREDICTED: RNA
           polymerase II subunit 5-mediating protein homolog
           isoform X2 [Glycine max]
          Length = 374

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
 Frame = +2

Query: 209 QNFVERSPDAEFIPSVAKTRDQSKSKSEVSVPAPKPDASNRLSRPSTDSLKAFTGSIIER 388
           +NFVE    +E IP+      +SK +S  +  A K +  ++ S+PS DS KAFTGSIIE 
Sbjct: 286 ENFVEYIDPSEKIPA------RSKERSVQATTASKTEVRHQTSQPSFDSRKAFTGSIIEH 339

Query: 389 TDNL-PILPERETINA-PSNSQSSKPVSRFKQRR 484
            +N+ P   ++ + ++  S SQSSKPVSRFK +R
Sbjct: 340 AENIKPTTRQQSSASSQDSGSQSSKPVSRFKMQR 373


>ref|XP_002338319.1| predicted protein [Populus trichocarpa]
          Length = 126

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
 Frame = +2

Query: 65  QEKSEDHNHVKKLSDSLSPPNDTDKLHRGTSYVLTGNKDESSHD--KDILQNFVERSPDA 238
           Q      N  K  + S++   DT   +     V +    E + D  K I+ + VER   A
Sbjct: 2   QTPKSGFNSSKAFTGSIAESADTVSTNSRQQAVTSSQASEPAFDSSKAIIGSIVER---A 58

Query: 239 EFIPSVAKTRDQSKSKSEVSVPAPKPDASNRLSRPSTDSLKAFTGSIIERTDNLPILPER 418
           + IP  ++ +  + S++               S+P+ DS KAFTGS++ERT NLP   + 
Sbjct: 59  DTIPKNSQQQAATSSQA---------------SKPAFDSSKAFTGSVVERTYNLPTSGQD 103

Query: 419 ETINAPSNSQSSKPVSRFKQRR 484
              +  S+SQ SKPVSRFK RR
Sbjct: 104 AVSSQSSSSQPSKPVSRFKIRR 125