BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00038504
         (880 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe...   457   e-126
gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe...   451   e-125
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe...   451   e-124
gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus pe...   416   e-115
ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300...   418   e-114
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   382   e-103
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   381   e-103
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   381   e-103
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 377   e-102
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   376   e-102
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 375   e-102
gb|EMJ17360.1| hypothetical protein PRUPE_ppa015308mg, partial [...   374   e-101
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              369   e-100
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       367   2e-99
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   367   4e-99
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             366   5e-99
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   365   9e-99
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   365   9e-99
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...   365   9e-99
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     365   1e-98

>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  457 bits (1175), Expect(2) = e-126
 Identities = 232/310 (74%), Positives = 257/310 (82%), Gaps = 27/310 (8%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SL NLPHYRMSPKEN+ILRE IEELL++GFIRES+SPCAVPVLLVPKKD  WRMCVD
Sbjct: 622  PGASLQNLPHYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVD 681

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
            SRAINKIT+KYRFPI R EDMLD LSGSK+FSKIDLRSGYH     PGDEWKTAFKSKDG
Sbjct: 682  SRAINKITVKYRFPIPRLEDMLDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDG 741

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN---------------- 507
            L+EW+VMPFGLSN PSTFMR+MNQVLRP I SFVVVYF+DILI                 
Sbjct: 742  LFEWLVMPFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLD 801

Query: 508  --QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
              ++N+L++NLKKCTFCT+KLLFLGFVVGE GIQVD  K++AI DWP P TV+EVRSF G
Sbjct: 802  VLRENKLFVNLKKCTFCTNKLLFLGFVVGEHGIQVDDEKIKAILDWPAPKTVSEVRSFHG 861

Query: 682  LATFYG---RDFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVF 849
            LATFY    R FS+IVAPITECL KG+F W EEQ+ SFA IK+KLC+APVLALPNF+KVF
Sbjct: 862  LATFYRRFVRHFSSIVAPITECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVF 921

Query: 850  TVECDASGVG 879
             VECDASGVG
Sbjct: 922  EVECDASGVG 931



 Score = 23.9 bits (50), Expect(2) = e-126
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 3   DIQHQIDLIPWV*LAKSP 56
           DIQH+IDL+P   L   P
Sbjct: 613 DIQHRIDLVPGASLQNLP 630


>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
          Length = 1457

 Score =  451 bits (1160), Expect(2) = e-125
 Identities = 229/310 (73%), Positives = 256/310 (82%), Gaps = 27/310 (8%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG +LPNLPHYRMSPKEN+ILRE IEELL++GFIRES+SPCAVPVLLVPKKD  WRMCVD
Sbjct: 612  PGANLPNLPHYRMSPKENDILREQIEELLQKGFIRESLSPCAVPVLLVPKKDKTWRMCVD 671

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
            SRAINKIT+K RFPI R EDMLD LSGS++FSKIDLRSGYH     PGDEWKTAFKSKDG
Sbjct: 672  SRAINKITVKSRFPIPRLEDMLDVLSGSRVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDG 731

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN---------------- 507
            L+EW+VMPFGLSNAPSTFMR+MNQVLRP I SFVVVYF+DILI                 
Sbjct: 732  LFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLD 791

Query: 508  --QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
              ++N+LY+NLKKCTFCT+KLLFLGFVVGE GIQVD  K++AI DWP P  V+EVRSF G
Sbjct: 792  VLRENKLYMNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPTPKIVSEVRSFHG 851

Query: 682  LATFYG---RDFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVF 849
            LATFY    R FS+I APITECL KG+F W +EQ+ SFA IK+KLC+APVLALPNF+KVF
Sbjct: 852  LATFYRRFVRHFSSITAPITECLKKGRFSWGDEQERSFADIKEKLCTAPVLALPNFEKVF 911

Query: 850  TVECDASGVG 879
             VECDASGVG
Sbjct: 912  EVECDASGVG 921



 Score = 23.9 bits (50), Expect(2) = e-125
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 3   DIQHQIDLIPWV*LAKSP 56
           DIQH+IDL+P   L   P
Sbjct: 603 DIQHRIDLVPGANLPNLP 620


>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  451 bits (1160), Expect = e-124
 Identities = 229/309 (74%), Positives = 255/309 (82%), Gaps = 27/309 (8%)
 Frame = +1

Query: 34   GCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVDS 213
            G SLPNLPHYRMSPKEN+ILRE IEELL++GFIRES+SPCAVPVLLVPKKD  WRMCVDS
Sbjct: 631  GASLPNLPHYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDS 690

Query: 214  RAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDGL 378
            RA+NKI +KYRF I R ED+LD LSGSK+FSKIDLRSGYH     PGDEWKTAFKSKDGL
Sbjct: 691  RAVNKIKVKYRFSIPRLEDILDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGL 750

Query: 379  YEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN----------------- 507
            +EW+VMPFGLSNAPSTFMR+MNQVLRP I SFVVVYF+DILI                  
Sbjct: 751  FEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDV 810

Query: 508  -QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLGL 684
             ++N+LY+NLKKCTFCT+KLLFLGFVVGE GIQVD  K++AI DWP P TV+EVRSF GL
Sbjct: 811  LRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGL 870

Query: 685  ATFY---GRDFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVFT 852
            ATFY    R FS+I APITECL KG+F W EEQ+ SFA IK+KLC+APVLALPNF+KVF 
Sbjct: 871  ATFYMRFVRHFSSIAAPITECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVFE 930

Query: 853  VECDASGVG 879
            VECDASGVG
Sbjct: 931  VECDASGVG 939


>gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
          Length = 1384

 Score =  416 bits (1069), Expect(2) = e-115
 Identities = 216/305 (70%), Positives = 242/305 (79%), Gaps = 22/305 (7%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPNLPHYRMSPKEN+ILRE IEELL++GFIRES+SPCAVPVLLVPKKD  WRMCVD
Sbjct: 565  PGASLPNLPHYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVD 624

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHPGDEWKTAFKSKDGLYEWM 390
            SRAINKIT+KYRFPI R EDMLD LSGSK+FSKIDLRS              +  + +W+
Sbjct: 625  SRAINKITVKYRFPIPRLEDMLDVLSGSKVFSKIDLRS-------------EQGRIIKWL 671

Query: 391  VMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN------------------QKN 516
            VMPFGLSNAPSTFMR+MNQVLRP I SFVVVYF+DILI                   ++N
Sbjct: 672  VMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLREN 731

Query: 517  QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLGLATFY 696
            +LY+NLKKCTFCT+KLLFLGFVVGE GIQVD  K++AI DWP P TV+EVRSF GLATFY
Sbjct: 732  KLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFY 791

Query: 697  G---RDFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVFTVECD 864
                R FS+IVAPITECL KG+F W EEQ+ SFA IK+KLC+APVLALPNF+KVF VECD
Sbjct: 792  RRFVRHFSSIVAPITECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVFEVECD 851

Query: 865  ASGVG 879
            ASGVG
Sbjct: 852  ASGVG 856



 Score = 25.4 bits (54), Expect(2) = e-115
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 3   DIQHQIDLIPWV*LAKSP 56
           DIQHQIDL+P   L   P
Sbjct: 556 DIQHQIDLVPGASLPNLP 573


>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
            subsp. vesca]
          Length = 1034

 Score =  418 bits (1074), Expect = e-114
 Identities = 215/309 (69%), Positives = 243/309 (78%), Gaps = 27/309 (8%)
 Frame = +1

Query: 34   GCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVDS 213
            G SLPNLPHYRMSPKENEIL+E IEELL++G IRESMSPCAVPVLLVPKKD  WRMCVDS
Sbjct: 660  GASLPNLPHYRMSPKENEILKEKIEELLRKGHIRESMSPCAVPVLLVPKKDRSWRMCVDS 719

Query: 214  RAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHP-----GDEWKTAFKSKDGL 378
            RAINKITIKYRFPI + EDMLD L GS +FSKIDLRSGYH      GDEWKTAFKSKDGL
Sbjct: 720  RAINKITIKYRFPIPQLEDMLDVLGGSVVFSKIDLRSGYHQIRIKLGDEWKTAFKSKDGL 779

Query: 379  YEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN----------------- 507
            YEW+VMPFGLSNAPSTFMRVMNQVL+P I + VVVYF+DILI                  
Sbjct: 780  YEWLVMPFGLSNAPSTFMRVMNQVLKPYIGTCVVVYFDDILIYSKSKEEHLQHLRKVLEV 839

Query: 508  -QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLGL 684
             Q+N+LY+NLKKC+F T KLLFLG+VV  EGI VD+ KV+AI++WP P TV +VRSF GL
Sbjct: 840  LQENKLYVNLKKCSFMTKKLLFLGYVVSSEGINVDQDKVKAIQEWPTPKTVGDVRSFHGL 899

Query: 685  ATFYGR---DFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVFT 852
            ATFY     +FS I APITEC+ KG+FQW EE + SFA+IK KL +APVLAL +FDK+F 
Sbjct: 900  ATFYRHFVPNFSAITAPITECMKKGRFQWGEEHEKSFAMIKYKLSTAPVLALSDFDKIFE 959

Query: 853  VECDASGVG 879
            +E D  GVG
Sbjct: 960  IETDVCGVG 968


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  382 bits (980), Expect = e-103
 Identities = 190/311 (61%), Positives = 233/311 (74%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPN P YR +P E + ++  ++ELL+ GFI+ES+SPCAVPVLLVPKKD  WRMCVD
Sbjct: 657  PGASLPNRPAYRTNPDEAKEIQRQVDELLQAGFIQESLSPCAVPVLLVPKKDGTWRMCVD 716

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
             RAIN IT+KYR+PI R +DMLDEL G+K+FSKIDLR GYH      GDEWKTAFK+K+G
Sbjct: 717  CRAINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRGYHQIRMQKGDEWKTAFKTKNG 776

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+MN VLR  I  FVVVYF+DILI  K+             
Sbjct: 777  LYEWLVMPFGLTNAPSTFMRLMNHVLRNFIGKFVVVYFDDILIYSKDPQKHIIHLKEVFL 836

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 QLY NL+KC F  + ++FLGF+V  +GI+VD+TK+QAIRDWP P T T+VRSF G
Sbjct: 837  VLRREQLYANLEKCYFGVESVVFLGFIVSSKGIEVDETKIQAIRDWPTPKTATKVRSFHG 896

Query: 682  LATFYGR---DFSTIVAPITECLKG--KFQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA+FY R   DFSTI AP+ E +K   KF+W  +Q+ +F  +K+KLCSA VL+LPNFDK 
Sbjct: 897  LASFYRRFVKDFSTIAAPLNELVKKDVKFEWGPKQEQAFQTLKEKLCSAQVLSLPNFDKT 956

Query: 847  FTVECDASGVG 879
            F +ECDASG+G
Sbjct: 957  FEIECDASGIG 967


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  381 bits (978), Expect = e-103
 Identities = 190/311 (61%), Positives = 232/311 (74%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG  LPN P YR +P+E + L+  +EELL +GF+RESMSPC+VPVLLVPKKD  WRMCVD
Sbjct: 697  PGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVD 756

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
             RAINKIT+KYR PI R +DMLD+L GSK+FSKIDL+SGYH     PGDEWKTAFK+K G
Sbjct: 757  CRAINKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYG 816

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+MN V +     F+VVYF+DILI  +N             
Sbjct: 817  LYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFE 876

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +L+ NLKKCTFC D+++FLGFVV   G++VD  K++AI++WP P +VTEVRSF G
Sbjct: 877  VLRNQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHG 936

Query: 682  LATFYG---RDFSTIVAPITECLKGK--FQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA+FY    RDFSTI AP+TE +K    F W +EQD++F L+K KLCSAP+L LP+F K 
Sbjct: 937  LASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKS 996

Query: 847  FTVECDASGVG 879
            F VECDASG G
Sbjct: 997  FEVECDASGKG 1007


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  381 bits (978), Expect = e-103
 Identities = 190/311 (61%), Positives = 232/311 (74%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG  LPN P YR +P+E + L+  +EELL +GF+RESMSPC+VPVLLVPKKD  WRMCVD
Sbjct: 697  PGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVD 756

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
             RAINKIT+KYR PI R +DMLD+L GSK+FSKIDL+SGYH     PGDEWKTAFK+K G
Sbjct: 757  CRAINKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYG 816

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+MN V +     F+VVYF+DILI  +N             
Sbjct: 817  LYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFE 876

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +L+ NLKKCTFC D+++FLGFVV   G++VD  K++AI++WP P +VTEVRSF G
Sbjct: 877  VLRNQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHG 936

Query: 682  LATFYG---RDFSTIVAPITECLKGK--FQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA+FY    RDFSTI AP+TE +K    F W +EQD++F L+K KLCSAP+L LP+F K 
Sbjct: 937  LASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKS 996

Query: 847  FTVECDASGVG 879
            F VECDASG G
Sbjct: 997  FEVECDASGKG 1007


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  377 bits (969), Expect = e-102
 Identities = 185/310 (59%), Positives = 226/310 (72%), Gaps = 27/310 (8%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG  LPN P YR  P   + L+  IEEL+ +GF+RES+SPCAVP LLVPKKD  WRMC D
Sbjct: 612  PGSVLPNKPAYRCDPNATKELQHQIEELMAKGFVRESLSPCAVPALLVPKKDGTWRMCTD 671

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
            SRAIN IT+KYRFPI R +DMLDELSG+ +FSKIDLR GYH      GDEWKTAFK+K G
Sbjct: 672  SRAINNITVKYRFPIPRLDDMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHG 731

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQK-------------- 513
            LYEW+VMPFGLSNAPSTFMR+M +VLRPC+  F VVYF+DIL+  K              
Sbjct: 732  LYEWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSKTKGEHLKHLEVVFK 791

Query: 514  ----NQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +LY  L+KCTF  +++ FLG+++   GI VD+  + A++ WP PTTVTEVRSF G
Sbjct: 792  ILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQSWPTPTTVTEVRSFHG 851

Query: 682  LATFYGR---DFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVF 849
            LA+FY R   +FST+VAPITEC+ KG+FQW E+   SF  IKQ +C+ P+L LP+FD++F
Sbjct: 852  LASFYRRFIKNFSTVVAPITECMRKGEFQWTEQAQQSFEKIKQLMCNTPILKLPDFDQLF 911

Query: 850  TVECDASGVG 879
             VECDASGVG
Sbjct: 912  EVECDASGVG 921


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  376 bits (966), Expect = e-102
 Identities = 187/310 (60%), Positives = 230/310 (74%), Gaps = 27/310 (8%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPNLP YRM+P E+  L+  ++ELL +GFIRES+SPC VP LL PKKD  WRMCVD
Sbjct: 619  PGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVD 678

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
            SRAINKITIKYRFPI R +DMLD + GS +FSKIDLRSGYH     PGDEWKT+FK+KDG
Sbjct: 679  SRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDG 738

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+M QVL+P I  FVVVYF+DILI  ++             
Sbjct: 739  LYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCEDHEEHLKQVMR 798

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 + YINLKKCTF +  ++FLGFVV  +G++ D  K++AI DWP+PT + EVRSF G
Sbjct: 799  TLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDWPVPTNIHEVRSFHG 858

Query: 682  LATFYG---RDFSTIVAPITECLK-GKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVF 849
            +ATFY    R+FS+I+APITEC+K G F W +  + +F  IK K+ + P+L LP+F+KVF
Sbjct: 859  MATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVF 918

Query: 850  TVECDASGVG 879
             V CDAS VG
Sbjct: 919  EVACDASHVG 928


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  375 bits (964), Expect = e-102
 Identities = 182/310 (58%), Positives = 236/310 (76%), Gaps = 27/310 (8%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG +LPN   YR  PK  + L++ I EL+ +GF+RES+SPC+VP LLVPKKD  WRMC D
Sbjct: 600  PGATLPNKAAYRSDPKATQELQQQIGELVSKGFVRESLSPCSVPALLVPKKDGSWRMCTD 659

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
            SRAIN ITIKYRFPI R +D+LDELSG++LFSKIDLR GYH      GDEWKTAFK+K G
Sbjct: 660  SRAINNITIKYRFPIPRLDDILDELSGAQLFSKIDLRQGYHQVRIKEGDEWKTAFKTKHG 719

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN---------------- 507
            LYEW+VMPFGLSNAPSTFMR+M +VLRP +  FVVVYF+DIL+                 
Sbjct: 720  LYEWLVMPFGLSNAPSTFMRLMTEVLRPYLGRFVVVYFDDILVYSPSKEEHLKHLQVLFE 779

Query: 508  --QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
              ++++LY  L+KC+F  +++ FLGF++ + GI VD+ KV+AI+ WPIP  +T+VRSF G
Sbjct: 780  TLREHKLYGKLEKCSFMQNEVQFLGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHG 839

Query: 682  LATFYGR---DFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVF 849
            LA+FY R   DFST++APITEC+ KG+F+W ++ ++SF +IK+KLC +P+L LPNF+K+F
Sbjct: 840  LASFYRRFIKDFSTLMAPITECMKKGEFKWGDKAESSFNIIKEKLCESPILTLPNFNKLF 899

Query: 850  TVECDASGVG 879
             VECDASG+G
Sbjct: 900  EVECDASGIG 909


>gb|EMJ17360.1| hypothetical protein PRUPE_ppa015308mg, partial [Prunus persica]
          Length = 1150

 Score =  374 bits (959), Expect(2) = e-101
 Identities = 204/310 (65%), Positives = 226/310 (72%), Gaps = 27/310 (8%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPNLPHYRMSPKEN+ILRE IEELL++GFIRES+SPCAVPVLLVPKKD  WRM   
Sbjct: 501  PGASLPNLPHYRMSPKENDILREQIEELLQKGFIRESLSPCAVPVLLVPKKDKTWRM--- 557

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
                        FPI R EDMLD LSGS++FSKIDLRSGYH     PGDEWKTAFKSKD 
Sbjct: 558  ------------FPIPRLEDMLDVLSGSRVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDV 605

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN---------------- 507
            L+E +VMPFGLSNAPSTFMR+MNQVLRP I SFVVVYF+DILI                 
Sbjct: 606  LFECLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTIKEKHLVHLRQVLD 665

Query: 508  --QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
              ++N+LY+NLKKCTFCT+KLLFLGFVVGE                  P TV+EVRSF G
Sbjct: 666  VLRENKLYVNLKKCTFCTNKLLFLGFVVGENA----------------PKTVSEVRSFHG 709

Query: 682  LATFYG---RDFSTIVAPITECL-KGKFQWREEQDNSFALIKQKLCSAPVLALPNFDKVF 849
            LATFY    R FS+I API ECL KG+F W EEQ+ SFA IK+KLC+APVLALPN +KVF
Sbjct: 710  LATFYRRFVRHFSSIAAPIMECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNLEKVF 769

Query: 850  TVECDASGVG 879
             VECDASGVG
Sbjct: 770  EVECDASGVG 779



 Score = 23.9 bits (50), Expect(2) = e-101
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 3   DIQHQIDLIPWV*LAKSP 56
           DIQH+IDL+P   L   P
Sbjct: 492 DIQHRIDLVPGASLPNLP 509


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  369 bits (948), Expect = e-100
 Identities = 187/311 (60%), Positives = 228/311 (73%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPN P YR +P E + L + + EL++RG IRESMSPCAVPVLLVPKKD  WRMCVD
Sbjct: 906  PGASLPNRPAYRTNPVETKELEKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVD 965

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKDG 375
             RAIN IT+KYR PI R +DMLDEL GS +FSK+DL+SGYH      GDEWKTAFK+  G
Sbjct: 966  CRAINNITVKYRHPIPRLDDMLDELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQG 1025

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN---------------- 507
            LYEW+VMPFGL+NAPSTFMR+MN VLR  I  FV+VYF+DIL+                 
Sbjct: 1026 LYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLE 1085

Query: 508  --QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
              +K +LY NLKKCTF TD L+FLGFVV  +G++VD+ KV+AIR+WP P +V EVRSF G
Sbjct: 1086 VLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHG 1145

Query: 682  LATFYGR---DFSTIVAPITECLKGK--FQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA FY R   DFST+ AP+TE +K    F+W + Q+++F  +K+KL  APVL+LP+F K 
Sbjct: 1146 LAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHAPVLSLPDFLKT 1205

Query: 847  FTVECDASGVG 879
            F +ECDASGVG
Sbjct: 1206 FEIECDASGVG 1216


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  367 bits (943), Expect = 2e-99
 Identities = 185/311 (59%), Positives = 229/311 (73%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPN   YR +P+E + ++  ++ELL +G++RES+SPC+VPVLLVPKKD  WRMCVD
Sbjct: 742  PGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVD 801

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHP-----GDEWKTAFKSKDG 375
             RAIN ITI+YR PI R +DMLDELSGS +FSKIDLRSGYH      GDEWKTAFK+K G
Sbjct: 802  CRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFG 861

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+MN+VLR  I  FVVVYF+DILI  ++             
Sbjct: 862  LYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFD 921

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +L+ NL+KCTFCTD++ FLG+VV  +GI+VD+ KV+AI  WP+PTT+T+VRSFLG
Sbjct: 922  ALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLG 981

Query: 682  LATFYGR---DFSTIVAPITECLKGK--FQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA FY R   DFSTI AP+ E  K    F W   Q N+F  +K KL  AP+L LP+F+K 
Sbjct: 982  LAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTLKDKLTHAPLLQLPDFNKT 1041

Query: 847  FTVECDASGVG 879
            F +ECDASG+G
Sbjct: 1042 FELECDASGIG 1052


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  367 bits (941), Expect = 4e-99
 Identities = 184/311 (59%), Positives = 229/311 (73%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPN   YR +P+E + ++  + ELL +G++RES+SPCAVPV+LVPKKD  WRMCVD
Sbjct: 714  PGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVD 773

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHP-----GDEWKTAFKSKDG 375
             RAIN ITI+YR PI R +DMLDELSGS +FSK+DLRSGYH      GDEWKTAFK+K G
Sbjct: 774  CRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFG 833

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+MN+VLRP I  FVVVYF+DILI  K+             
Sbjct: 834  LYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFN 893

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +L+ NL+KCTFCTD++ FLG+VV  +GI+VD+ KV+AI+ WP P TV++VRSFLG
Sbjct: 894  ALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLG 953

Query: 682  LATFYGR---DFSTIVAPITECLKG--KFQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA FY R   DFSTI AP+    K    F W   Q+N+F ++K KL  AP+L LP+F+K 
Sbjct: 954  LAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKT 1013

Query: 847  FTVECDASGVG 879
            F +ECDASG+G
Sbjct: 1014 FELECDASGIG 1024



 Score =  147 bits (370), Expect = 7e-33
 Identities = 83/192 (43%), Positives = 114/192 (59%), Gaps = 23/192 (11%)
 Frame = +1

Query: 373  GLYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN--------------- 507
            GLYE+ VM FGL+NAP+ FM +MN+V    +  FVVV+ +DIL+                
Sbjct: 1625 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVL 1684

Query: 508  ---QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFL 678
               +++QLY  L KC F   ++ FLG V+  +G+ VD   V A+ DW  P TVT++RSFL
Sbjct: 1685 GKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFL 1744

Query: 679  GLATFYGR---DFSTIVAPITECLK--GKFQWREEQDNSFALIKQKLCSAPVLALPNFDK 843
            GLA +Y R   +FS I  P+T+ LK   KF W  + + +F  +K+KL S+PVL LP+  K
Sbjct: 1745 GLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRK 1804

Query: 844  VFTVECDASGVG 879
             F V CDAS  G
Sbjct: 1805 DFMVYCDASPQG 1816


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  366 bits (940), Expect = 5e-99
 Identities = 181/312 (58%), Positives = 228/312 (73%), Gaps = 28/312 (8%)
 Frame = +1

Query: 28   SPGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCV 207
            +PG SLPN P YR +P++ + ++  + EL+ +G++RES+SPCAVP++LVPKKD  WRMC 
Sbjct: 603  NPGASLPNRPAYRSNPQQTQEIQRQVAELISKGWVRESLSPCAVPIILVPKKDGSWRMCT 662

Query: 208  DSRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYH-----PGDEWKTAFKSKD 372
            D RAI+ ITIKYR PI R +D+LDEL G+ LFSKIDL+SGYH      GDEWKTAFK+K 
Sbjct: 663  DCRAISNITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQIRIREGDEWKTAFKTKF 722

Query: 373  GLYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------ 516
            GLYEWMVMPFGL+NAPSTFMR+MN VLR  +  FVVVYF+DILI  KN            
Sbjct: 723  GLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSKNLDDHCIHLKAVL 782

Query: 517  ------QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFL 678
                   LY NL+KC FCTD ++FLGF+V  +G+ VD+ KV+AIR+WP P  V+EVRSF 
Sbjct: 783  QVLRYENLYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVKAIREWPPPKNVSEVRSFH 842

Query: 679  GLATFYGR---DFSTIVAPITECLKGK--FQWREEQDNSFALIKQKLCSAPVLALPNFDK 843
            GLA+FY R   DFST+ AP+ E ++    F+W E+Q+ +FA +K+KL  APVLALPNF K
Sbjct: 843  GLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAALKEKLTQAPVLALPNFSK 902

Query: 844  VFTVECDASGVG 879
             F +ECDAS VG
Sbjct: 903  SFEIECDASNVG 914


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  365 bits (938), Expect = 9e-99
 Identities = 183/311 (58%), Positives = 228/311 (73%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPN   YR +P+E + ++  + ELL +G++RES+SPCAVPV+LVPKKD  WRMCVD
Sbjct: 1047 PGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVD 1106

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHP-----GDEWKTAFKSKDG 375
             RAIN ITI+YR PI R +DMLDELSGS +FSK+DLRSGYH      GDEWKT FK+K G
Sbjct: 1107 CRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTKFG 1166

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+MN+VLRP I  FVVVYF+DILI  K+             
Sbjct: 1167 LYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFN 1226

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +L+ NL+KCTFCTD++ FLG+VV  +GI+VD+ KV+AI+ WP P TV++VRSFLG
Sbjct: 1227 ALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLG 1286

Query: 682  LATFYGR---DFSTIVAPITECLKG--KFQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA FY R   DFSTI AP+    K    F W   Q+N+F ++K KL  AP+L LP+F+K 
Sbjct: 1287 LAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKT 1346

Query: 847  FTVECDASGVG 879
            F +ECDASG+G
Sbjct: 1347 FELECDASGIG 1357


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  365 bits (938), Expect = 9e-99
 Identities = 183/311 (58%), Positives = 229/311 (73%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPN   YR +P+E + ++  ++ELL +G++RES+SPC++PVLLVPKKD  WRMCVD
Sbjct: 742  PGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVD 801

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHP-----GDEWKTAFKSKDG 375
             RAIN ITI+YR PI R +DMLDELSGS +FSKIDLRSGYH      GDEWKTAFK+K G
Sbjct: 802  CRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFG 861

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTF+R+MN+VLR  I  FVVVYF+DILI  ++             
Sbjct: 862  LYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFD 921

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +L+ NL+KCTFCTD++ FLG+VV  +GI+VD+ KV+AI  WP+PTT+T+VRSFLG
Sbjct: 922  ALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLG 981

Query: 682  LATFYGR---DFSTIVAPITECLKGK--FQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA FY R   DFSTI AP+ E  K    F W   Q N+F  +K KL  AP+L LP+F+K 
Sbjct: 982  LAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTLKDKLTHAPLLQLPDFNKT 1041

Query: 847  FTVECDASGVG 879
            F +ECDASG+G
Sbjct: 1042 FELECDASGIG 1052


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score =  365 bits (938), Expect = 9e-99
 Identities = 183/311 (58%), Positives = 228/311 (73%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG SLPN   YR +P+E + ++  + ELL +G++RES+SPCAVPV+LVPKKD  WRMCVD
Sbjct: 1056 PGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVD 1115

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHP-----GDEWKTAFKSKDG 375
             RAIN ITI+YR PI R +DMLDELSGS +FSK+DLRSGYH      GDEWKT FK+K G
Sbjct: 1116 CRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTKFG 1175

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILINQKN------------- 516
            LYEW+VMPFGL+NAPSTFMR+MN+VLRP I  FVVVYF+DILI  K+             
Sbjct: 1176 LYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFN 1235

Query: 517  -----QLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
                 +L+ NL+KCTFCTD++ FLG+VV  +GI+VD+ KV+AI+ WP P TV++VRSFLG
Sbjct: 1236 ALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLG 1295

Query: 682  LATFYGR---DFSTIVAPITECLKG--KFQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA FY R   DFSTI AP+    K    F W   Q+N+F ++K KL  AP+L LP+F+K 
Sbjct: 1296 LAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKT 1355

Query: 847  FTVECDASGVG 879
            F +ECDASG+G
Sbjct: 1356 FELECDASGIG 1366


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  365 bits (937), Expect = 1e-98
 Identities = 183/311 (58%), Positives = 227/311 (72%), Gaps = 28/311 (9%)
 Frame = +1

Query: 31   PGCSLPNLPHYRMSPKENEILREHIEELLKRGFIRESMSPCAVPVLLVPKKDNQWRMCVD 210
            PG +LPN P YR +P+E + ++  ++ LL +G++RES+SPCAVPV+LVPKKD  WRMCVD
Sbjct: 717  PGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVD 776

Query: 211  SRAINKITIKYRFPITRFEDMLDELSGSKLFSKIDLRSGYHP-----GDEWKTAFKSKDG 375
             RAIN IT++YR PI R +DMLDELSGS +FSKIDLRSG+H      GDEWKTAFK+K G
Sbjct: 777  CRAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKTAFKTKFG 836

Query: 376  LYEWMVMPFGLSNAPSTFMRVMNQVLRPCIRSFVVVYFNDILIN---------------- 507
            LYEW+VMPFGL+NAPSTFMR+MN VLR  I  FVVVYF+DILI                 
Sbjct: 837  LYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVAHIQQVLD 896

Query: 508  --QKNQLYINLKKCTFCTDKLLFLGFVVGEEGIQVDKTKVQAIRDWPIPTTVTEVRSFLG 681
              +K QLY NL+KCTFCTD+++FLGFVV   GIQVD++KV+AI+DWP P  V++V+SF G
Sbjct: 897  VLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPTPENVSQVKSFRG 956

Query: 682  LATFYG---RDFSTIVAPITECLKG--KFQWREEQDNSFALIKQKLCSAPVLALPNFDKV 846
            LA FY    R FSTI AP+ E  K    FQW E Q+ +F  +K++L   P+L LP+F K 
Sbjct: 957  LAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLSEGPLLVLPDFTKT 1016

Query: 847  FTVECDASGVG 879
            F VECDASG+G
Sbjct: 1017 FEVECDASGIG 1027