BLASTX nr result
ID: Achyranthes22_contig00037063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00037063
(396 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_904110.1| photosystem I assembly protein Ycf4 [Amborella ... 64 1e-12
gb|AEJ10254.1| photosystem I assembly protein ycf4 [Navia saxico... 65 1e-12
gb|AHA13021.1| photosystem I assembly protein ycf4 [Costus pulve... 64 2e-12
gb|AHA12935.1| photosystem I assembly protein ycf4 [Monocostus u... 64 2e-12
gb|AEJ10256.1| photosystem I assembly protein ycf4 [Neoregelia c... 64 2e-12
emb|CAN82382.1| hypothetical protein VITISV_017653 [Vitis vinifera] 49 2e-12
gb|AEQ36949.1| photosystem I assembly protein Ycf4 (chloroplast)... 66 3e-12
ref|YP_006503802.1| photosystem I assembly protein Ycf4 (chlorop... 66 3e-12
gb|ADD30789.1| photosystem I assembly protein ycf4 [Staphylea co... 66 4e-12
gb|AEJ10260.1| photosystem I assembly protein ycf4 [Pitcairnia f... 63 4e-12
gb|AEJ10244.1| photosystem I assembly protein ycf4 [Fosterella c... 63 4e-12
ref|YP_001936528.1| photosystem I assembly protein Ycf4 [Fagopyr... 62 8e-12
gb|AEJ10267.1| photosystem I assembly protein ycf4 [Thamnochortu... 62 1e-11
ref|YP_001542540.1| photosystem I assembly protein ycf4 [Cuscuta... 62 2e-11
gb|AGW04677.1| photosystem I assembly protein ycf4 [Matelea bifl... 63 2e-11
gb|AGW04374.1| photosystem I assembly protein ycf4 [Araujia seri... 63 2e-11
gb|AER52423.1| photosystem I assembly protein ycf4 [Asclepias al... 63 2e-11
gb|AEJ10234.1| photosystem I assembly protein ycf4 [Brocchinia m... 59 4e-11
ref|YP_008578550.1| photosystem I assembly protein ycf4 (chlorop... 62 5e-11
gb|AGW04527.1| photosystem I assembly protein ycf4 [Eustegia min... 63 6e-11
>ref|NP_904110.1| photosystem I assembly protein Ycf4 [Amborella trichopoda]
gi|51316669|sp|Q70XZ2.1|YCF4_AMBTC RecName:
Full=Photosystem I assembly protein Ycf4
gi|34481640|emb|CAD45118.1| Ycf4 protein [Amborella
trichopoda]
Length = 235
Score = 63.5 bits (153), Expect(2) = 1e-12
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SN CWA SYLGRNLISLFP QQILFFPQGIVM
Sbjct: 15 GSRKTSNLCWACILFLGSLGFLLVGTSSYLGRNLISLFPSQQILFFPQGIVM 66
Score = 35.0 bits (79), Expect(2) = 1e-12
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISK 146
MNWRSERIWIELI G K
Sbjct: 1 MNWRSERIWIELITGSRK 18
>gb|AEJ10254.1| photosystem I assembly protein ycf4 [Navia saxicola]
gi|338826218|gb|AEJ10262.1| photosystem I assembly
protein ycf4 [Puya laxa]
Length = 183
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 33/52 (63%), Positives = 34/52 (65%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNFCWA SYLGRNLIS+FP QQILFFPQGIVM
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQILFFPQGIVM 66
Score = 33.9 bits (76), Expect(2) = 1e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>gb|AHA13021.1| photosystem I assembly protein ycf4 [Costus pulverulentus]
Length = 184
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNFCWA SYLGRNLIS+FP QQI+FFPQGIVM
Sbjct: 15 GSRKTSNFCWACILFLDSLGFLVVGTSSYLGRNLISVFPSQQIIFFPQGIVM 66
Score = 33.9 bits (76), Expect(2) = 2e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELITGSRKTSNF 22
>gb|AHA12935.1| photosystem I assembly protein ycf4 [Monocostus uniflorus]
Length = 184
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNFCWA SYLGRNLIS+FP QQI+FFPQGIVM
Sbjct: 15 GSRKTSNFCWACILFLDSLGFLVVGTSSYLGRNLISVFPSQQIIFFPQGIVM 66
Score = 33.9 bits (76), Expect(2) = 2e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELITGSRKTSNF 22
>gb|AEJ10256.1| photosystem I assembly protein ycf4 [Neoregelia carolinae]
Length = 183
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNFCWA SYLGRNLIS+FP QQI+FFPQGIVM
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQIIFFPQGIVM 66
Score = 33.9 bits (76), Expect(2) = 2e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>emb|CAN82382.1| hypothetical protein VITISV_017653 [Vitis vinifera]
Length = 175
Score = 48.9 bits (115), Expect(2) = 2e-12
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*FLLGLYSFFWFIRILIGWN 80
M+WRSERIWIEL G+SKN+ FIR+LIGWN
Sbjct: 1 MSWRSERIWIELXNGVSKNK-----------FIRVLIGWN 29
Score = 48.9 bits (115), Expect(2) = 2e-12
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -1
Query: 72 YLGRNLISLFPPQQILFFPQGIVM 1
YLGRNLISLFP QQI+FFPQGIVM
Sbjct: 32 YLGRNLISLFPSQQIIFFPQGIVM 55
>gb|AEQ36949.1| photosystem I assembly protein Ycf4 (chloroplast) [Datura
stramonium]
Length = 184
Score = 66.2 bits (160), Expect(2) = 3e-12
Identities = 33/52 (63%), Positives = 34/52 (65%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRKISN CWA SYLGRNLIS FPPQQI+FFPQGIVM
Sbjct: 15 GSRKISNLCWAVILFLGSLGFLLVGTSSYLGRNLISFFPPQQIIFFPQGIVM 66
Score = 30.8 bits (68), Expect(2) = 3e-12
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISK 146
M WRSE IWIELI G K
Sbjct: 1 MTWRSEHIWIELITGSRK 18
>ref|YP_006503802.1| photosystem I assembly protein Ycf4 (chloroplast) [Datura
stramonium] gi|350996523|gb|AEQ37034.1| photosystem I
assembly protein Ycf4 [Datura stramonium]
Length = 184
Score = 66.2 bits (160), Expect(2) = 3e-12
Identities = 33/52 (63%), Positives = 34/52 (65%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRKISN CWA SYLGRNLIS FPPQQI+FFPQGIVM
Sbjct: 15 GSRKISNLCWAFILFLGSLGFLLVGTSSYLGRNLISFFPPQQIIFFPQGIVM 66
Score = 30.8 bits (68), Expect(2) = 3e-12
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISK 146
M WRSE IWIELI G K
Sbjct: 1 MTWRSEHIWIELITGSRK 18
>gb|ADD30789.1| photosystem I assembly protein ycf4 [Staphylea colchica]
Length = 184
Score = 65.9 bits (159), Expect(2) = 4e-12
Identities = 33/52 (63%), Positives = 34/52 (65%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SN CWA SYLGRNLISLFPPQQI+FFPQGIVM
Sbjct: 15 GSRKTSNLCWAFILFLGSLGFLFVGVSSYLGRNLISLFPPQQIIFFPQGIVM 66
Score = 30.8 bits (68), Expect(2) = 4e-12
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISK 146
M+WRS+ IWIELI G K
Sbjct: 1 MSWRSDHIWIELIAGSRK 18
>gb|AEJ10260.1| photosystem I assembly protein ycf4 [Pitcairnia feliciana]
Length = 183
Score = 62.8 bits (151), Expect(2) = 4e-12
Identities = 32/52 (61%), Positives = 33/52 (63%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNFCWA SYLGRNLIS+FP QQI FFPQGIVM
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQITFFPQGIVM 66
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>gb|AEJ10244.1| photosystem I assembly protein ycf4 [Fosterella caulescens]
Length = 183
Score = 62.8 bits (151), Expect(2) = 4e-12
Identities = 32/52 (61%), Positives = 33/52 (63%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNFCWA SYLGRNLIS+FP QQI FFPQGIVM
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQITFFPQGIVM 66
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>ref|YP_001936528.1| photosystem I assembly protein Ycf4 [Fagopyrum esculentum subsp.
ancestrale] gi|166065368|gb|ABY79743.1| photosystem I
assembly protein ycf4 [Fagopyrum esculentum subsp.
ancestrale]
Length = 184
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 32/52 (61%), Positives = 32/52 (61%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SN CWA SYLGRNLISLFP QQI FFPQGIVM
Sbjct: 15 GSRKTSNLCWAFILFLGSVGFLLVGTSSYLGRNLISLFPSQQIFFFPQGIVM 66
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISK 146
MNW+SERIWIELI G K
Sbjct: 1 MNWQSERIWIELIRGSRK 18
>gb|AEJ10267.1| photosystem I assembly protein ycf4 [Thamnochortus insignis]
Length = 185
Score = 62.0 bits (149), Expect(2) = 1e-11
Identities = 31/52 (59%), Positives = 33/52 (63%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNFCWA SYLG+NLI LFP QQILFFPQG+VM
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLMVGISSYLGKNLILLFPSQQILFFPQGVVM 66
Score = 33.1 bits (74), Expect(2) = 1e-11
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIEL+ G K F
Sbjct: 1 MNWRSEHIWIELLKGSRKTSNF 22
>ref|YP_001542540.1| photosystem I assembly protein ycf4 [Cuscuta exaltata]
gi|172048133|sp|A8W3D3.1|YCF4_CUSEX RecName:
Full=Photosystem I assembly protein Ycf4
gi|158938687|gb|ABW83704.1| photosystem I assembly
protein ycf4 [Cuscuta exaltata]
Length = 184
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 32/52 (61%), Positives = 33/52 (63%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRKISN CWA SYLGRNLIS FP QQI+FFPQGIVM
Sbjct: 15 GSRKISNLCWAFILFLGSLGFFLVGTSSYLGRNLISFFPLQQIIFFPQGIVM 66
Score = 32.0 bits (71), Expect(2) = 2e-11
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISK 146
M+WRSE IWIELI G K
Sbjct: 1 MSWRSEHIWIELIAGSRK 18
>gb|AGW04677.1| photosystem I assembly protein ycf4 [Matelea biflora]
Length = 184
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 32/51 (62%), Positives = 33/51 (64%)
Frame = -1
Query: 153 SRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
SRKISNFCWA SYLGRNLIS FP QQI+FFPQGIVM
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIVM 66
Score = 30.8 bits (68), Expect(2) = 2e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 199 MNWRSERIWIELI 161
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AGW04374.1| photosystem I assembly protein ycf4 [Araujia sericifera]
gi|544187046|gb|AGW04985.1| photosystem I assembly
protein ycf4 [Vincetoxicum rossicum]
Length = 184
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 32/51 (62%), Positives = 33/51 (64%)
Frame = -1
Query: 153 SRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
SRKISNFCWA SYLGRNLIS FP QQI+FFPQGIVM
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIVM 66
Score = 30.8 bits (68), Expect(2) = 2e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 199 MNWRSERIWIELI 161
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AER52423.1| photosystem I assembly protein ycf4 [Asclepias albicans]
gi|355331817|gb|AER52505.1| photosystem I assembly
protein ycf4 [Asclepias albicans]
gi|355331900|gb|AER52587.1| photosystem I assembly
protein ycf4 [Asclepias coulteri]
gi|355331983|gb|AER52669.1| photosystem I assembly
protein ycf4 [Asclepias cutleri]
gi|355332066|gb|AER52751.1| photosystem I assembly
protein ycf4 [Asclepias cutleri]
gi|355332148|gb|AER52832.1| photosystem I assembly
protein ycf4 [Asclepias leptopus]
gi|355332231|gb|AER52914.1| photosystem I assembly
protein ycf4 [Asclepias macrotis]
gi|355332312|gb|AER52994.1| photosystem I assembly
protein ycf4 [Asclepias macrotis]
gi|355332391|gb|AER53072.1| photosystem I assembly
protein ycf4 [Asclepias masonii]
gi|355332474|gb|AER53154.1| photosystem I assembly
protein ycf4 [Asclepias subaphylla]
gi|355332557|gb|AER53236.1| photosystem I assembly
protein ycf4 [Asclepias subaphylla]
gi|355332636|gb|AER53314.1| photosystem I assembly
protein ycf4 [Asclepias subulata]
gi|355332719|gb|AER53396.1| photosystem I assembly
protein ycf4 [Asclepias subulata]
gi|355332802|gb|AER53478.1| photosystem I assembly
protein ycf4 [Asclepias albicans x Asclepias subulata]
Length = 183
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 32/51 (62%), Positives = 33/51 (64%)
Frame = -1
Query: 153 SRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
SRKISNFCWA SYLGRNLIS FP QQI+FFPQGIVM
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIVM 66
Score = 30.8 bits (68), Expect(2) = 2e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 199 MNWRSERIWIELI 161
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AEJ10234.1| photosystem I assembly protein ycf4 [Brocchinia micrantha]
Length = 184
Score = 59.3 bits (142), Expect(2) = 4e-11
Identities = 31/52 (59%), Positives = 33/52 (63%)
Frame = -1
Query: 156 GSRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
GSRK SNF WA SYLGRNLIS+FP QQI+FFPQGIVM
Sbjct: 15 GSRKTSNFGWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIIFFPQGIVM 66
Score = 33.9 bits (76), Expect(2) = 4e-11
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3
Query: 199 MNWRSERIWIELIGGISKNQ*F 134
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>ref|YP_008578550.1| photosystem I assembly protein ycf4 (chloroplast) [Asclepias nivea]
gi|544187137|gb|AGW05075.1| photosystem I assembly
protein ycf4 (chloroplast) [Asclepias nivea]
Length = 183
Score = 62.0 bits (149), Expect(2) = 5e-11
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = -1
Query: 153 SRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
SRKISNFCWA SYLGRNLIS FP Q+I+FFPQGIVM
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQEIIFFPQGIVM 66
Score = 30.8 bits (68), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 199 MNWRSERIWIELI 161
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AGW04527.1| photosystem I assembly protein ycf4 [Eustegia minuta]
Length = 184
Score = 63.2 bits (152), Expect(2) = 6e-11
Identities = 32/51 (62%), Positives = 33/51 (64%)
Frame = -1
Query: 153 SRKISNFCWAXXXXXXXXXXXXXXXXSYLGRNLISLFPPQQILFFPQGIVM 1
SRKISNFCWA SYLGRNLIS FP QQI+FFPQGIVM
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIVM 66
Score = 29.3 bits (64), Expect(2) = 6e-11
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 199 MNWRSERIWIEL 164
MNWRSE IWIEL
Sbjct: 1 MNWRSEHIWIEL 12