BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00036613
         (578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   275   6e-72
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   271   7e-71
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   268   6e-70
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   261   7e-68
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   261   1e-67
gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]           258   6e-67
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe...   258   6e-67
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   258   1e-66
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   257   2e-66
ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chlor...   255   7e-66
ref|XP_004153393.1| PREDICTED: RNA pseudourine synthase 6, chlor...   255   7e-66
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   255   7e-66
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ...   254   1e-65
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   251   7e-65
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   251   1e-64
ref|XP_002867828.1| pseudouridine synthase family protein [Arabi...   250   2e-64
ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Caps...   250   2e-64
gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus...   246   2e-63
ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thalian...   246   2e-63
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   244   1e-62

>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
           sativus]
          Length = 475

 Score =  275 bits (703), Expect = 6e-72
 Identities = 136/193 (70%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
 Frame = -3

Query: 576 REKLGTSVSSFKSDKALPTSTITSFTPSL-NGYPEYTRLLPCPSTNLTPRVEHLVVLEDG 400
           R  LG+  S+F    ++   T+ + T S  NGYP+Y RLLPCPS +  PRVEH+VVLE G
Sbjct: 44  RRSLGSKSSAFPCKSSITDVTVKTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAG 103

Query: 399 HVCEYISKSLGLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRR 220
            V EYI KSL LPPLYVADLI FGAVYYALVCP PP +ATPEQI+ +K FT P  LK R+
Sbjct: 104 PVMEYICKSLNLPPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRK 163

Query: 219 SIKGKTFREAQKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVL 40
           SIKGKT REAQKTFR+T  DEF E GTYLRVHVHPKRFPRCYEIDW+SRI+AVTESYVVL
Sbjct: 164 SIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVL 223

Query: 39  DKPAGTSVGGASD 1
           DKPAGTSVGG +D
Sbjct: 224 DKPAGTSVGGTTD 236


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
           chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  271 bits (694), Expect = 7e-71
 Identities = 135/193 (69%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
 Frame = -3

Query: 576 REKLGTSVSSFKSDKALPTSTITSFTPSL-NGYPEYTRLLPCPSTNLTPRVEHLVVLEDG 400
           R  LG+  S+F    ++   T+ + T S  NGYP+Y RLLPCPS +  PRVEH+VVLE G
Sbjct: 44  RCSLGSKSSAFPCKSSITDVTVKTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAG 103

Query: 399 HVCEYISKSLGLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRR 220
            V EYI KSL LPPLYVADLI FGAVYYALVCP PP +ATPEQI+ +K+ T P  LK R+
Sbjct: 104 PVMEYICKSLNLPPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKNXTEPSFLKGRK 163

Query: 219 SIKGKTFREAQKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVL 40
           SIKGKT REAQKTFR+T  DEF E GTYLRVHVHPKRFPRCYEIDW+SRI+AVTESYVVL
Sbjct: 164 SIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVL 223

Query: 39  DKPAGTSVGGASD 1
           DKPAGTSVGG +D
Sbjct: 224 DKPAGTSVGGTTD 236


>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  268 bits (686), Expect = 6e-70
 Identities = 130/178 (73%), Positives = 150/178 (84%)
 Frame = -3

Query: 534 KALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPL 355
           + L  S+ ++ T S+NGYPEY RLLPCPS N  PRVEHLVV E G V +YISK+L LPPL
Sbjct: 60  RELTASSDSANTSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPL 119

Query: 354 YVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFR 175
           +VADLI FGAVYYALVCP+PP SATPEQ++ +K  T+P +L+ R SIKGKT REAQKTFR
Sbjct: 120 FVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFR 179

Query: 174 VTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           +T  +EF EAGTYLRVHVHPKRFPRCYEIDW+SRI+AVTESYVVLDKPAGTSVGG +D
Sbjct: 180 ITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 237


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
           gi|550340110|gb|EEE85437.2| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 470

 Score =  261 bits (668), Expect = 7e-68
 Identities = 128/186 (68%), Positives = 149/186 (80%)
 Frame = -3

Query: 558 SVSSFKSDKALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYIS 379
           S  S K D A  T+T      S+NGYPEYTRLLPCPS N  PR+EHLVV E+G V +YI 
Sbjct: 51  SCESLKQDIACTTAT-----SSVNGYPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYIC 105

Query: 378 KSLGLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTF 199
           K+L LPPL+VADLI FGAV+YALVCP PP +ATPEQI+ ++  T+P +LK R SIKGKT 
Sbjct: 106 KALDLPPLFVADLIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTV 165

Query: 198 REAQKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTS 19
           REAQKTFR+T  D+F EAG YLRVHVHPKRFPRCY+IDW+SRI+ VTES+VVLDKPAGTS
Sbjct: 166 REAQKTFRITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTS 225

Query: 18  VGGASD 1
           VGG +D
Sbjct: 226 VGGTTD 231


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551677|gb|ESR62306.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  261 bits (666), Expect = 1e-67
 Identities = 125/174 (71%), Positives = 142/174 (81%)
 Frame = -3

Query: 522 TSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYVAD 343
           T+T  + TPS  GYPEY RLLPCPS N  PRVEHLVV E G V EYI + L LPPL+VAD
Sbjct: 70  TATAAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVAD 129

Query: 342 LIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVTCP 163
           LI FGAVYYALVCP PP++ATPEQ++ +K  T P +L  R SIKGKT REAQKTFR+T  
Sbjct: 130 LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 189

Query: 162 DEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           D+  EAGTYLRVHVHPKRFPRCY+IDW+SRI+AVTES+VVLDKPAGTSVGG +D
Sbjct: 190 DQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTD 243


>gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]
          Length = 446

 Score =  258 bits (660), Expect = 6e-67
 Identities = 124/176 (70%), Positives = 145/176 (82%), Gaps = 2/176 (1%)
 Frame = -3

Query: 522 TSTITSFTP--SLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYV 349
           T+ +    P  SLN YP+Y RLLPCPS NL PRVEHLVV E+G V +YI K+L LPPL+V
Sbjct: 65  TTDVAQINPASSLNCYPKYDRLLPCPSHNLPPRVEHLVVTEEGRVLDYICKALDLPPLFV 124

Query: 348 ADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVT 169
           ADLI FGAV+YALVCP PP +ATPEQI+ +K  T+P +L+ R SIKGKT REAQKTFR+T
Sbjct: 125 ADLIHFGAVHYALVCPKPPPTATPEQIKVFKEVTAPSVLRKRASIKGKTVREAQKTFRIT 184

Query: 168 CPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
             ++F EAGTYLRVHVHPKRFPRCYEIDW+SRI+AV ESY+VLDKPAGTSVGG +D
Sbjct: 185 DREQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYIVLDKPAGTSVGGTTD 240


>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  258 bits (660), Expect = 6e-67
 Identities = 128/183 (69%), Positives = 145/183 (79%)
 Frame = -3

Query: 549 SFKSDKALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSL 370
           S K     PTS       S+NGYPEYTRLLPCPS N  PRVEHLVV E G V EYI K+L
Sbjct: 63  SLKQGVTQPTSV-----SSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTL 117

Query: 369 GLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREA 190
            LPP +VADLI FGAVYYALVCP PP +ATPEQ++ +K  T+P +LK R SIKGKT REA
Sbjct: 118 DLPPQFVADLIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREA 177

Query: 189 QKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGG 10
           QKTFR+T  DEF EAGTYLRVHVHPKRFPRCY+IDW+SRI+AV+E +VVLDKPAGT+VGG
Sbjct: 178 QKTFRITHADEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGG 237

Query: 9   ASD 1
            +D
Sbjct: 238 TTD 240


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score =  258 bits (658), Expect = 1e-66
 Identities = 124/192 (64%), Positives = 150/192 (78%)
 Frame = -3

Query: 576 REKLGTSVSSFKSDKALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGH 397
           R  L +    F  + + P    T+ T  +NG  +Y RLLPCPS N  PR+EHLVVLE+G 
Sbjct: 46  RFSLNSHERKFCCESSKPEVAYTTNTSCVNGNSDYDRLLPCPSYNRPPRIEHLVVLEEGP 105

Query: 396 VCEYISKSLGLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRS 217
           V +YI K+L LPPL+VADLI FGAV+YALVCP PP +ATPEQI+ ++ FT+P +LK R S
Sbjct: 106 VLDYICKALDLPPLFVADLIDFGAVHYALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSS 165

Query: 216 IKGKTFREAQKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLD 37
           IKGKT REAQKTFR+T  D++ EAGTYLRVHVHPKRFPRCY+IDW+SRI+AVT+ YVVLD
Sbjct: 166 IKGKTVREAQKTFRITHVDQYLEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLD 225

Query: 36  KPAGTSVGGASD 1
           KPAGTSVGG +D
Sbjct: 226 KPAGTSVGGTAD 237


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  257 bits (656), Expect = 2e-66
 Identities = 123/167 (73%), Positives = 137/167 (82%)
 Frame = -3

Query: 501 TPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYVADLIQFGAV 322
           TPS  GYPEY RLLPCPS N  PRVEHLVV E G V EYI + L LPPL+VADLI FGAV
Sbjct: 77  TPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAV 136

Query: 321 YYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVTCPDEFFEAG 142
           YYALVCP PP++ATPEQ++ +K  T P +L  R SIKGKT REAQKTFR+T  D+  EAG
Sbjct: 137 YYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAG 196

Query: 141 TYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           TYLRVHVHPKRFPRCY+IDW SRI+AVTES+VVLDKPAGTSVGG +D
Sbjct: 197 TYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTD 243


>ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
           sativus]
          Length = 475

 Score =  255 bits (651), Expect = 7e-66
 Identities = 123/172 (71%), Positives = 142/172 (82%)
 Frame = -3

Query: 516 TITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYVADLI 337
           T T+   + NGYP+Y RLLPC S N+ PRVEHLVVLE G V EYISKSL LPP+YVADLI
Sbjct: 65  TQTATNSAENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLI 124

Query: 336 QFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVTCPDE 157
            FGAVYYALVCP PP +A+ E+I+ +K FT P  L  R+SIKGKT REAQKTFR+T  DE
Sbjct: 125 HFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDE 184

Query: 156 FFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           F E GTYLRV+VHPKRFPRCYE+DW+SRI+AVT+SYVVLDKPAGTSVGG ++
Sbjct: 185 FVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTN 236


>ref|XP_004153393.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 287

 Score =  255 bits (651), Expect = 7e-66
 Identities = 123/172 (71%), Positives = 142/172 (82%)
 Frame = -3

Query: 516 TITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYVADLI 337
           T T+   + NGYP+Y RLLPC S N+ PRVEHLVVLE G V EYISKSL LPP+YVADLI
Sbjct: 65  TQTATNSAENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLI 124

Query: 336 QFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVTCPDE 157
            FGAVYYALVCP PP +A+ E+I+ +K FT P  L  R+SIKGKT REAQKTFR+T  DE
Sbjct: 125 HFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDE 184

Query: 156 FFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           F E GTYLRV+VHPKRFPRCYE+DW+SRI+AVT+SYVVLDKPAGTSVGG ++
Sbjct: 185 FVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTN 236


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
           sativus]
          Length = 475

 Score =  255 bits (651), Expect = 7e-66
 Identities = 123/172 (71%), Positives = 142/172 (82%)
 Frame = -3

Query: 516 TITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYVADLI 337
           T T+   + NGYP+Y RLLPC S N+ PRVEHLVVLE G V EYISKSL LPP+YVADLI
Sbjct: 65  TQTATNSAENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLI 124

Query: 336 QFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVTCPDE 157
            FGAVYYALVCP PP +A+ E+I+ +K FT P  L  R+SIKGKT REAQKTFR+T  DE
Sbjct: 125 HFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDE 184

Query: 156 FFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           F E GTYLRV+VHPKRFPRCYE+DW+SRI+AVT+SYVVLDKPAGTSVGG ++
Sbjct: 185 FVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTN 236


>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 491

 Score =  254 bits (649), Expect = 1e-65
 Identities = 123/164 (75%), Positives = 137/164 (83%)
 Frame = -3

Query: 492 LNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYVADLIQFGAVYYA 313
           L  YPEY RLLPCPS N  PRVEHLVV E G V EYI K+L LPP++VADLI FGAVYYA
Sbjct: 90  LFSYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPPMFVADLIHFGAVYYA 149

Query: 312 LVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVTCPDEFFEAGTYL 133
           LVCP PP SATPEQI+ +K  T+P +L  R SI+GKT REAQKTFR+T  D+F EAGTYL
Sbjct: 150 LVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYL 209

Query: 132 RVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           RVHVHPKRFPRCYEIDW+SRI+AVT+SYVVLDKPAGTSVGG +D
Sbjct: 210 RVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTD 253


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  251 bits (642), Expect = 7e-65
 Identities = 122/177 (68%), Positives = 141/177 (79%)
 Frame = -3

Query: 531 ALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLY 352
           AL   + TS T S NG+  Y RL+PCP  N  PRVEHLVV ++G V EYI K+L LPPLY
Sbjct: 72  ALSDISSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKALDLPPLY 131

Query: 351 VADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRV 172
           V DLIQFGAVYYALVCP PP +A+PEQI+ Y+  T P +L+ R SIKGKT REAQKTF++
Sbjct: 132 VEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKI 191

Query: 171 TCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           T  DE  EAGTYLRVHVHPKRFPRCY+IDW+SRI+AVT+ YVVLDKPAGTSVGG +D
Sbjct: 192 TRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTD 248


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
           lycopersicum]
          Length = 448

 Score =  251 bits (640), Expect = 1e-64
 Identities = 122/177 (68%), Positives = 140/177 (79%)
 Frame = -3

Query: 531 ALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLY 352
           AL     TS T S NG+  Y RL+PCP  N  PRVEHLVV ++G V EYI K+L LPPLY
Sbjct: 37  ALSDINSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKALDLPPLY 96

Query: 351 VADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRV 172
           V DLIQFGAVYYALVCP PP +A+PEQI+ Y+  T P +L+ R SIKGKT REAQKTF++
Sbjct: 97  VEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKI 156

Query: 171 TCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           T  DE  EAGTYLRVHVHPKRFPRCY+IDW+SRI+AVT+ YVVLDKPAGTSVGG +D
Sbjct: 157 TRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTD 213


>ref|XP_002867828.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313664|gb|EFH44087.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 476

 Score =  250 bits (639), Expect = 2e-64
 Identities = 124/188 (65%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
 Frame = -3

Query: 561 TSVSSFKSDKALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGH-VCEY 385
           T +S  K+D    T+  +S T   +GYPEY RL+PCP+ NL PR+EH+VVLED   V E+
Sbjct: 54  TCLSLHKTDSQNQTTLSSSST---SGYPEYNRLMPCPAHNLPPRIEHMVVLEDDVLVSEF 110

Query: 384 ISKSLGLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGK 205
           ISK L LPPLYV+DLI+FGAV+YALVCP PP +ATPEQI+ ++  T P +LK R SIKGK
Sbjct: 111 ISKQLDLPPLYVSDLIRFGAVHYALVCPKPPPTATPEQIELFEEVTCPSVLKKRSSIKGK 170

Query: 204 TFREAQKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAG 25
           T REAQKTFRVT  +++ EAGTYLRVHVHPKR PRCYEIDW+SRI+AVT+SYV+LDKPAG
Sbjct: 171 TVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAG 230

Query: 24  TSVGGASD 1
           T+VGG +D
Sbjct: 231 TTVGGTTD 238


>ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Capsella rubella]
           gi|482553612|gb|EOA17805.1| hypothetical protein
           CARUB_v10006203mg [Capsella rubella]
          Length = 479

 Score =  250 bits (638), Expect = 2e-64
 Identities = 123/188 (65%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
 Frame = -3

Query: 561 TSVSSFKSDKALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGH-VCEY 385
           T +S  ++D    T+  +S T   +GYPEY RL+PCP+ N  PR+EH+VVLED   V E+
Sbjct: 57  TCLSLLQTDSQNQTTLTSSST---SGYPEYNRLMPCPAYNNPPRIEHMVVLEDDVLVAEF 113

Query: 384 ISKSLGLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGK 205
           IS+ L LPPLYVADLI+FGAV+YALVCP PP +ATPE+I+ ++  TSP +LK R SIKGK
Sbjct: 114 ISRQLDLPPLYVADLIRFGAVHYALVCPKPPPTATPEEIKLFEEVTSPSVLKKRSSIKGK 173

Query: 204 TFREAQKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAG 25
           T REAQKTFRVT  D++ EAGTYLRVHVHPKR PRCYEIDW+SRI+AVT+SYV+LDKPAG
Sbjct: 174 TVREAQKTFRVTHTDQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVTDSYVILDKPAG 233

Query: 24  TSVGGASD 1
           T+VGG +D
Sbjct: 234 TTVGGTTD 241


>gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  246 bits (629), Expect = 2e-63
 Identities = 121/167 (72%), Positives = 133/167 (79%)
 Frame = -3

Query: 501 TPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSLGLPPLYVADLIQFGAV 322
           T S N  P+Y RLLPCP     PRVEHLVV E G V E+I K+L LPPLYV DLIQFGAV
Sbjct: 76  TSSSNSLPKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELPPLYVTDLIQFGAV 135

Query: 321 YYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREAQKTFRVTCPDEFFEAG 142
           YYALVCP PP SAT EQI+ +K  T P +L+ R SIKGKT REAQKTFRVT  D+F E G
Sbjct: 136 YYALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHADQFVEPG 195

Query: 141 TYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGGASD 1
           TYLRVHVHPKRFPRCYEIDW+SRI++V ESYVVLDKPAGTSVGG +D
Sbjct: 196 TYLRVHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTD 242


>ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thaliana]
           gi|75212600|sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA
           pseudouridine synthase 6, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 6; AltName:
           Full=RNA-uridine isomerase 6; Flags: Precursor
           gi|4455285|emb|CAB36821.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268974|emb|CAB81284.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|23296381|gb|AAN13057.1| unknown protein [Arabidopsis
           thaliana] gi|110741616|dbj|BAE98756.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332659101|gb|AEE84501.1| RNA pseudourine synthase 6
           [Arabidopsis thaliana]
          Length = 472

 Score =  246 bits (629), Expect = 2e-63
 Identities = 124/188 (65%), Positives = 150/188 (79%), Gaps = 1/188 (0%)
 Frame = -3

Query: 561 TSVSSFKSDKALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGH-VCEY 385
           T +S  K+D    T+  +S   S +GY EY RL+PCP+ NL PR+EH+VVLED   V E+
Sbjct: 50  TCLSLLKTDSQNQTTLSSS---SNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEF 106

Query: 384 ISKSLGLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGK 205
           ISK L LPPLYVADLI+FGAV+YALVCP PP +ATPE+I  ++  TSP +LK R SIKGK
Sbjct: 107 ISKQLDLPPLYVADLIRFGAVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGK 166

Query: 204 TFREAQKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAG 25
           T REAQKTFRVT  +++ EAGTYLRVHVHPKR PRCYEIDW+SRI+AVT+SYV+LDKPAG
Sbjct: 167 TVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAG 226

Query: 24  TSVGGASD 1
           T+VGG +D
Sbjct: 227 TTVGGTTD 234


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 477

 Score =  244 bits (623), Expect = 1e-62
 Identities = 122/183 (66%), Positives = 141/183 (77%)
 Frame = -3

Query: 549 SFKSDKALPTSTITSFTPSLNGYPEYTRLLPCPSTNLTPRVEHLVVLEDGHVCEYISKSL 370
           S K +   PT+       S+ GYP YTRLLPCPS N  PRVEHLVV E G V EYI K L
Sbjct: 64  SLKEEVTYPTAA-----SSVYGYP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKL 117

Query: 369 GLPPLYVADLIQFGAVYYALVCPDPPMSATPEQIQWYKHFTSPELLKPRRSIKGKTFREA 190
            LP  +VADLI FGAVYYALVCP PP +ATPEQ++ YK  T+P +LK R SIKGKT REA
Sbjct: 118 DLPAQFVADLIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREA 177

Query: 189 QKTFRVTCPDEFFEAGTYLRVHVHPKRFPRCYEIDWQSRILAVTESYVVLDKPAGTSVGG 10
           QKTFR+T  D++ E GTYLRVHVHPKRFPRCY+IDW+SR++AVTE +VVLDKPAGT+VGG
Sbjct: 178 QKTFRITHADQYVEDGTYLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGG 237

Query: 9   ASD 1
            +D
Sbjct: 238 TTD 240