BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00036580
         (1349 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    89   3e-52
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    93   8e-52
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    93   3e-51
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    93   5e-51
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    98   3e-44
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    90   1e-43
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]    94   3e-43
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    89   4e-41
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    97   3e-38
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    94   3e-38
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]   102   5e-38
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   100   5e-38
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    80   2e-37
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]    97   4e-37
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   100   2e-35
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]    97   1e-34
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    76   2e-30
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    95   3e-30
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    91   1e-28
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    81   3e-27

>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 89.4 bits (220), Expect(4) = 3e-52
 Identities = 41/79 (51%), Positives = 53/79 (67%)
 Frame = +3

Query: 1113 CRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRFFLTIVDDCSRATWV 1292
            C  CF  KQ R  F IS NK  E F LIH D+WGP +  S++ + +FLT+VDD SR+ W 
Sbjct: 533  CDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWT 592

Query: 1293 FLMLTKSEVGQLFRNFYAM 1349
            +LM +K+EV QL +NF AM
Sbjct: 593  YLMSSKTEVSQLIKNFCAM 611



 Score = 74.3 bits (181), Expect(4) = 3e-52
 Identities = 42/116 (36%), Positives = 57/116 (49%)
 Frame = +1

Query: 694  ISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFS 873
            I+  P+   +GK + ATK G + L D+  L +VLFVP   C                 F+
Sbjct: 394  ITPSPVTKPDGKASQATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFT 453

Query: 874  NKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 1041
            + FC +QD  LR LIGAG   +GVY F  V    +       + +  LWH+RLGHP
Sbjct: 454  DTFCFLQDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHP 509



 Score = 62.4 bits (150), Expect(4) = 3e-52
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
 Frame = +2

Query: 2   DELSSACKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLPSLNVA 181
           +EL +      C C AAS+  K  E D VH+F LGL+  +F ++ S +  ++PLP L   
Sbjct: 157 EELQNYKSGRECKCEAASDIEKEREDDRVHKFLLGLD-SRFSSIRSSITDIEPLPDLYQV 215

Query: 182 YVKVISDERKQAVTDSSDVTRXXXXXXXXXXXXSGRGEQRQ--YCTHCGRAGH 334
           Y +V+ +E+    + + DV +            + R   +   +CTHC R GH
Sbjct: 216 YSRVVREEQNLNASRTKDVVKTEAIGFSVQSSTTPRFRDKSTLFCTHCNRKGH 268



 Score = 49.3 bits (116), Expect(4) = 3e-52
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = +3

Query: 435 GCAQGFASNMGATRAHDTLDLSDTDRGSAPTLT---DEQWTQLMTAIKGQKSLSSSEKLA 605
           G + G   N  +         ++  + +APT++   ++Q  QL++ ++ Q+  SSSE+L+
Sbjct: 304 GSSSGRGGNRSSAPTTRGRGRANNAQAAAPTVSGDGNDQIAQLISLLQAQRPSSSSERLS 363

Query: 606 GMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPV 713
           G       +ID+GAS+H +G+ ++  D  DI  SPV
Sbjct: 364 GNTCLTDGVIDTGASHHMTGDCSILVDVFDITPSPV 399


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 92.8 bits (229), Expect(4) = 8e-52
 Identities = 45/95 (47%), Positives = 60/95 (63%)
 Frame = +3

Query: 1062 LHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSN 1241
            L    S S  S++CD    +CF  KQ R  F  S NK+++ F LIHCD+WGP ++ SS  
Sbjct: 530  LFSGSSCSVSSRSCD----VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG 585

Query: 1242 SRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYA 1346
            + +FLTIVDD SR+ W +L+L KSEV  +  NF A
Sbjct: 586  AVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLA 620



 Score = 73.6 bits (179), Expect(4) = 8e-52
 Identities = 39/107 (36%), Positives = 55/107 (51%)
 Frame = +1

Query: 721  NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 900
            +G+ T A   G  +LS+ + L NVL+VPAL C+                F++  C++QD 
Sbjct: 416  DGRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDR 475

Query: 901  TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 1041
              R LIG G   DGVY        ++  +KV I+    LWH+RLGHP
Sbjct: 476  FSRTLIGTGEERDGVYYLTDAATTTV--HKVDITTDHALWHQRLGHP 520



 Score = 69.3 bits (168), Expect(4) = 8e-52
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
 Frame = +2

Query: 14  SACKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLPSLNVAYVKV 193
           + CK   CTC A  E  K  E + +HQF LGL+  +FG + + L+ MDP PSL   Y +V
Sbjct: 172 TVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRV 231

Query: 194 ISDERKQAVTDSSDVTRXXXXXXXXXXXXSGRG----------EQRQYCTHCGRAGH 334
           + +E++ A     +  +            +  G          ++   C+HCGR+GH
Sbjct: 232 VREEQRLASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGH 288



 Score = 38.1 bits (87), Expect(4) = 8e-52
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = +3

Query: 432 GGCAQGFASNMGATRAHDTLDLSDTDRGSA-PTLTDEQWTQLMTAIKGQKSLSSSEKLAG 608
           GG + G ++N G  R   T   + T   S  P  T +Q  +++T +   K+  +S+KL+G
Sbjct: 320 GGRSSG-SNNSGRGRGQVTAAHATTSNLSPFPEFTPDQ-LRVITQMIQNKNNGTSDKLSG 377

Query: 609 MYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVG 716
                  I+D+GAS+H +G L+L  +   I S  VG
Sbjct: 378 KMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVG 413


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 92.8 bits (229), Expect(4) = 3e-51
 Identities = 45/95 (47%), Positives = 60/95 (63%)
 Frame = +3

Query: 1062 LHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSN 1241
            L    S S  S++CD    +CF  KQ R  F  S NK+++ F LIHCD+WGP ++ SS  
Sbjct: 530  LFSGSSCSVSSRSCD----VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG 585

Query: 1242 SRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYA 1346
            + +FLTIVDD SR+ W +L+L KSEV  +  NF A
Sbjct: 586  AVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLA 620



 Score = 70.5 bits (171), Expect(4) = 3e-51
 Identities = 37/105 (35%), Positives = 53/105 (50%)
 Frame = +1

Query: 727  KNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDHTL 906
            + T A   G  +LS+ + L NVL+VPAL C+                F++  C++QD   
Sbjct: 418  RKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFS 477

Query: 907  RNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 1041
            R LIG G   DGVY        ++  +KV ++    LWH+RLGHP
Sbjct: 478  RTLIGTGEERDGVYYLTDAATTTV--HKVDVTTDHALWHQRLGHP 520



 Score = 69.3 bits (168), Expect(4) = 3e-51
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
 Frame = +2

Query: 14  SACKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLPSLNVAYVKV 193
           + CK   CTC A  E  K  E + +HQF LGL+  +FG + + L+ MDP PSL   Y +V
Sbjct: 172 TVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRV 231

Query: 194 ISDERKQAVTDSSDVTRXXXXXXXXXXXXSGRG----------EQRQYCTHCGRAGH 334
           + +E++ A     +  +            +  G          ++   C+HCGR+GH
Sbjct: 232 VREEQRLASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGH 288



 Score = 39.3 bits (90), Expect(4) = 3e-51
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = +3

Query: 432 GGCAQGFASNMGATRAHDTLDLSDTDR-GSAPTLTDEQWTQLMTAIKGQKSLSSSEKLAG 608
           GG + G ++N G  R   T   + T    S P  T +Q  +++T +   K+  +S+KL+G
Sbjct: 320 GGRSSG-SNNSGRGRGQVTAAHATTSNLSSFPEFTPDQ-LRVITQMIQNKNNGTSDKLSG 377

Query: 609 MYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVG 716
                  I+D+GAS+H +G L+L  +   I S  VG
Sbjct: 378 KMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVG 413


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 92.8 bits (229), Expect(4) = 5e-51
 Identities = 48/101 (47%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = +3

Query: 1059 MLHGAVSSSNKSQTCDLD----CRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQI 1226
            +L   + S     +C  D    C +C   KQ R SFS S NKA E F  IH D+WGP + 
Sbjct: 525  VLSSVLPSLEDFDSCSSDLKTICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGPYKH 584

Query: 1227 LSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
             SS  + +FLTIVDD SRA W+ LML KSEV  L + F AM
Sbjct: 585  ASSCGAHYFLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAM 625



 Score = 82.0 bits (201), Expect(4) = 5e-51
 Identities = 45/111 (40%), Positives = 59/111 (53%)
 Frame = +1

Query: 721  NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 900
            N K+T ATK+G + L  N+ L +VLFVP L+C                 F++K C+IQD 
Sbjct: 415  NAKHTIATKKGTLILGANMKLTHVLFVPDLSCTLISVARLLRELHCFAIFTDKVCVIQDR 474

Query: 901  TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHPP*KL 1053
            T + LIG GT  +GVY  +   V +  AN V       LWH RLGHP  K+
Sbjct: 475  TSKMLIGVGTESNGVYHLQRAEVVATSANVVKWKTNKALWHMRLGHPSSKV 525



 Score = 49.7 bits (117), Expect(4) = 5e-51
 Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
 Frame = +2

Query: 8   LSSACKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTV---VSGLLLMDPLPSLNV 178
           L+  C   +CT        + HE   +HQF +GL+  KFGT    + G L  D   SL+ 
Sbjct: 170 LTCCCNRPSCTHRVRQSQRRDHE--RIHQFLMGLDAAKFGTSRTNILGRLSRDDNISLDS 227

Query: 179 AYVKVISDERKQAVTDSS----DVTRXXXXXXXXXXXXSGRGEQRQYCTHCGRAGH 334
            Y ++I++ER   +T S     D                 R      CTHCGR+ H
Sbjct: 228 IYSEIIAEERHLTITRSKEERVDAVGFAVQTGVNAIASVTRVNNMGPCTHCGRSNH 283



 Score = 46.6 bits (109), Expect(4) = 5e-51
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = +3

Query: 435 GCAQGFASNMGATRAHDTLDLSDTDRGS-APTLTDEQWTQLMTAIKGQKSLSSSEKLAGM 611
           G  +G  ++  A  A  +   S     S  P ++ E W+ +   +K Q + +SSEKL+G 
Sbjct: 319 GRGRGHGNSYKANNAQTSHPSSSASEFSDIPGVSKEAWSAIRNLLK-QDTATSSEKLSGK 377

Query: 612 YDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGLQWKKH 734
            +   ++IDSGAS+H +G L L  + ++I  S V L   KH
Sbjct: 378 TNCVDFLIDSGASHHMTGFLDLLTEIYEIPHSVVVLPNAKH 418


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 98.2 bits (243), Expect(3) = 3e-44
 Identities = 47/103 (45%), Positives = 69/103 (66%)
 Frame = +3

Query: 1041 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 1220
            S KVV +L      SN   + +  C ICF  K PR+ F ++ NKA+ IF+ IHCD+WG  
Sbjct: 524  SEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFPLTDNKATRIFEKIHCDLWGSY 580

Query: 1221 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            + +SS  +R+FLTI+DD SRA W++L++ K+EV ++F +F AM
Sbjct: 581  KHVSSCAARYFLTIIDDFSRAVWIYLLVNKTEVFRMFMSFIAM 623



 Score = 80.9 bits (198), Expect(3) = 3e-44
 Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = +1

Query: 721  NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 900
            NG++  AT+ G +RLS+N+ L+NVL+V  L CN                F++  C IQDH
Sbjct: 417  NGESVVATQSGSVRLSNNITLKNVLYVSKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDH 476

Query: 901  TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLGHPP*KL 1053
            T R LIG G   DG+Y F      S+Q   V  + +++ LWHKR+GHP  K+
Sbjct: 477  T-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKV 527



 Score = 48.9 bits (115), Expect(3) = 3e-44
 Identities = 27/84 (32%), Positives = 44/84 (52%)
 Frame = +3

Query: 468 ATRAHDTLDLSDTDRGSAPTLTDEQWTQLMTAIKGQKSLSSSEKLAGMYDSNAWIIDSGA 647
           A  A  T+  S T   +    T EQW  L   I   +    +++L G +D+ +WIID+GA
Sbjct: 334 ANAASSTIGASSTKSSTDQLFTPEQWKALAGLIGNAQV--PNDRLNGKFDTKSWIIDTGA 391

Query: 648 SNHTSGNLALFYDCHDI*SSPVGL 719
           ++H +G+L+  +D   +    VGL
Sbjct: 392 THHVTGDLSWLFDTIALFECLVGL 415


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 90.1 bits (222), Expect(3) = 1e-43
 Identities = 42/91 (46%), Positives = 60/91 (65%)
 Frame = +3

Query: 1077 SSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRFFL 1256
            SS+  S+TC+    IC   KQ R+ F +S NK S  F+L+HCD+WGP +  S   SR+FL
Sbjct: 529  SSTFDSKTCE----ICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFL 584

Query: 1257 TIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            T+VDD SRA W++L+ +K E  +  +NF A+
Sbjct: 585  TLVDDYSRAVWLYLLPSKQEAPKHLKNFIAL 615



 Score = 80.9 bits (198), Expect(3) = 1e-43
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
 Frame = +1

Query: 703  PPLLVY--NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSN 876
            PP+L+   +G+ TTATK+G ++L  +L L++VLFV  L C+                 ++
Sbjct: 402  PPVLIKLPDGRFTTATKQGSVQLGSSLDLQDVLFVDGLHCHLISVSQLTRTRRCIFQITD 461

Query: 877  KFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 1041
            K CI+QD T   LIGAG   +G+Y F+ V   +   +K     +S LWH+RLGHP
Sbjct: 462  KVCIVQDRTTLMLIGAGRELNGLYFFRGVETAAAVTSKA--LPSSQLWHQRLGHP 514



 Score = 55.1 bits (131), Expect(3) = 1e-43
 Identities = 32/86 (37%), Positives = 49/86 (56%)
 Frame = +3

Query: 441 AQGFASNMGATRAHDTLDLSDTDRGSAPTLTDEQWTQLMTAIKGQKSLSSSEKLAGMYDS 620
           + G A+N+  T +  T  L+  DR     L D QW  L T ++ +KS S+  + +G Y  
Sbjct: 318 SSGMAANV-VTNSSLTSPLTSDDRIGLSGLNDSQWKILQTILEERKSTSNDHQ-SGKYFL 375

Query: 621 NAWIIDSGASNHTSGNLALFYDCHDI 698
            +WIIDSGA+NH +G+LA   +  D+
Sbjct: 376 ESWIIDSGATNHMTGSLAFLRNVCDM 401


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score = 93.6 bits (231), Expect(3) = 3e-43
 Identities = 45/103 (43%), Positives = 61/103 (59%)
 Frame = +3

Query: 1041 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 1220
            S +VV ++    S        +  C ICF  +Q R  F  S NKA E FDLIHCD+WG  
Sbjct: 332  SSRVVDLIXEVDSVGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECFDLIHCDLWGAY 391

Query: 1221 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            ++ +S    +FLTIVDDCSRA W++L+  K+EV  + +NF  M
Sbjct: 392  RVPASCGGIYFLTIVDDCSRAVWIYLLNRKNEVACVLKNFIVM 434



 Score = 78.6 bits (192), Expect(3) = 3e-43
 Identities = 43/107 (40%), Positives = 54/107 (50%)
 Frame = +1

Query: 721  NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 900
            NG  T A KE  + L + L L +VLFVP L CN                F+NK C IQD 
Sbjct: 227  NGAETKALKERTVTLGEKLKLRHVLFVPKLKCNLIFVLQLLDDSNLVVQFTNKICAIQDR 286

Query: 901  TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 1041
              R LIG G  C+G+Y  K   V  ++A K     +  LWH+R+GHP
Sbjct: 287  ISRMLIGVGEQCEGLYFLK--GVAPIRAYKTTSIASYELWHRRMGHP 331



 Score = 52.4 bits (124), Expect(3) = 3e-43
 Identities = 33/96 (34%), Positives = 47/96 (48%)
 Frame = +3

Query: 432 GGCAQGFASNMGATRAHDTLDLSDTDRGSAPTLTDEQWTQLMTAIKGQKSLSSSEKLAGM 611
           GG A+  A     T    ++ + D DR     L+DEQW  L+T +   KS  +++ L G 
Sbjct: 132 GGTARANAVQTXGTDGGRSIVI-DYDRTGISGLSDEQWATLLTMLNSHKS-GANZMLTGK 189

Query: 612 YDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGL 719
            +   WIID+GA +H +G      D  DI    VGL
Sbjct: 190 QNILPWIIDTGAXHHMTGTYECLNDLRDIMPCLVGL 225


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 89.4 bits (220), Expect(3) = 4e-41
 Identities = 46/103 (44%), Positives = 64/103 (62%)
 Frame = +3

Query: 1041 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 1220
            S +V++ +H   ++  K    D  C  C  GKQ RNSF +S  +A EIF+LIH DIWGP 
Sbjct: 397  SDRVLASIHSLGNNVMKGIE-DYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPY 455

Query: 1221 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            +  ++S + +FLTIVDD SR  W++LM  KSE   + +NF  M
Sbjct: 456  RTPTTSGAHYFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFM 498



 Score = 88.6 bits (218), Expect(3) = 4e-41
 Identities = 44/107 (41%), Positives = 63/107 (58%)
 Frame = +1

Query: 721  NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 900
            +G  T A + G ++LS +L L+NVL+VP+L CN                F++ FC+IQD 
Sbjct: 292  DGTKTVANEMGYVKLSKDLCLKNVLYVPSLKCNLISIGQLLKEKDYIVTFTDSFCVIQDR 351

Query: 901  TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 1041
            T RN IG G L +GVY +KP  ++  + N V + +   LWH+RLGHP
Sbjct: 352  TSRNPIGVGKLRNGVYYYKP--LQGEKVNAVKVEEKYELWHRRLGHP 396



 Score = 39.7 bits (91), Expect(3) = 4e-41
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 501 DTDRGSAPTLTDEQWTQLMTAIKGQKSLSSSEKLAGMYDS-NAWIIDSGASNHTSGNLAL 677
           D +R   P L D+ + +LM  ++   S  ++EKL G       WI+DSGAS H +G   L
Sbjct: 219 DVERNIIPGLNDDNFQKLMALLRNGSS--NAEKLTGKNKIVEEWILDSGASMHMTGRRDL 276

Query: 678 F 680
           F
Sbjct: 277 F 277



 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 41/111 (36%), Positives = 58/111 (52%)
 Frame = +2

Query: 2   DELSSACKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLPSLNVA 181
           DEL+   ++  CTC AA   VK  E +  HQF +GL+   FGTV S +L +DPLP+L   
Sbjct: 46  DELNQYIEIPECTCGAAQAIVKSREDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKI 105

Query: 182 YVKVISDERKQAVTDSSDVTRXXXXXXXXXXXXSGRGEQRQYCTHCGRAGH 334
           Y  V  +ER +++   +D                G+  +   CTHCG+ GH
Sbjct: 106 YAMVTQEERHRSMARGAD-RAEITVFAAXTEKPGGQTNKSGSCTHCGKTGH 155


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 97.4 bits (241), Expect(3) = 3e-38
 Identities = 48/90 (53%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
 Frame = +3

Query: 1092 SQTCDLD----CRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRFFLT 1259
            S + DL+    C IC+  KQ R  FS S+NK +  F+LIHCD+WGP +  +S  S +FLT
Sbjct: 525  SSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASCGSVYFLT 584

Query: 1260 IVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            IVDD SR+ W FLM  KSEV +L RNF AM
Sbjct: 585  IVDDFSRSVWTFLMAEKSEVSRLIRNFCAM 614



 Score = 64.7 bits (156), Expect(3) = 3e-38
 Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = +1

Query: 706  PLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFC 885
            P+   +G  + ATK G + L +   L +VLFVP   C                 F++  C
Sbjct: 402  PVTKPDGTASRATKRGTLALHNAYVLPDVLFVPDFNCTLISVAKLLKHTGCVAIFTDTLC 461

Query: 886  IIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANK-VGISDASMLWHKRLGHP 1041
             +QD   R LIGAG   +GVY F    V + + NK    S ++ LWH RLGHP
Sbjct: 462  FLQDRFTRTLIGAGEEREGVYYF--TGVLAARVNKGFKESSSATLWHHRLGHP 512



 Score = 45.8 bits (107), Expect(3) = 3e-38
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +3

Query: 516 SAPTLTDEQWTQLMTAIKGQKSLSSSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHD 695
           S P+  D Q  QL++ ++ Q   +SS+KL+G   +   IID+GAS+H +G++ L  +  D
Sbjct: 339 STPSNAD-QINQLISLLQAQNPATSSQKLSGKTFTTYVIIDTGASHHMTGDITLLTNVED 397

Query: 696 I*SSPV 713
           I  SPV
Sbjct: 398 IIPSPV 403


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 94.0 bits (232), Expect(4) = 3e-38
 Identities = 43/93 (46%), Positives = 64/93 (68%)
 Frame = +3

Query: 1071 AVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRF 1250
            +VSS++ ++ CD    +C   KQ RNSF +S+NK   IF+LI+CD+WGP +  S + +R+
Sbjct: 413  SVSSTHLNKACD----VCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGARY 468

Query: 1251 FLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            FLTI+DD SR  W++L+  KSE     +NF+AM
Sbjct: 469  FLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAM 501



 Score = 57.0 bits (136), Expect(4) = 3e-38
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
 Frame = +1

Query: 700  DPPLLVY-NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSN 876
            DP L+V  +G+   + KEG +RL  NL + +V +V     +                 S+
Sbjct: 287  DPILIVLADGRERISVKEGTVRLGSNLVMISVFYVEEFQSDLISIGQLMDENRCVLQMSD 346

Query: 877  KFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDAS--MLWHKRLGHP 1041
            +F ++QD T R ++GAG    G + F+   +    A  V + +     LWH R+GHP
Sbjct: 347  RFLVVQDRTSRMVMGAGRRVGGTFHFRSTEI----AASVTVKEEKNYELWHSRMGHP 399



 Score = 45.8 bits (107), Expect(4) = 3e-38
 Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
 Frame = +2

Query: 20  CKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLPSLNVAYVKVIS 199
           CK   C C   +   K  E D VH+F  GL+   F TV S L+   P+  L   Y  V  
Sbjct: 75  CKCGGCVCDLGALQEKDREEDKVHEFLSGLDDALFRTVRSSLVSRIPVQPLEEVYNIVRQ 134

Query: 200 DE-----RKQAVTDSSDVTRXXXXXXXXXXXXSGRGEQR---QYCTHCGRAGH 334
           +E         + D  +V               GRG+++     C HC R+GH
Sbjct: 135 EEDLLRNGANVLDDQREVN--AFAAQMRPKLYQGRGDEKDKSMVCKHCNRSGH 185



 Score = 30.8 bits (68), Expect(4) = 3e-38
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
 Frame = +3

Query: 432 GGCAQGFAS--NMGATRAHDTLD-----LSDTDRGSAPTLTDEQWTQLMTAIKGQKSLSS 590
           GG  +G A+  N      HDT +     L+D DR     LTD QW  + + +   K  ++
Sbjct: 221 GGRGRGAAAYANRVTVPNHDTYEQANYALTDEDRDGVNGLTDSQWRTIKSILNSGKD-AA 279

Query: 591 SEKLAGM 611
           +EKL  M
Sbjct: 280 TEKLTDM 286


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score =  102 bits (253), Expect(2) = 5e-38
 Identities = 50/103 (48%), Positives = 70/103 (67%)
 Frame = +3

Query: 1041 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 1220
            S KVV +L      SN   + +  C ICF  K PR+ FS+S NKA+ IF+ IHCD+WG  
Sbjct: 523  SEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFSLSDNKATRIFEKIHCDLWGSY 579

Query: 1221 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            + +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 580  KHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 622



 Score = 84.3 bits (207), Expect(2) = 5e-38
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = +1

Query: 679  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 858
            F  + + + P+ + NG++  AT+ G +RLS+N+ L+NVL+VP L CN             
Sbjct: 402  FDTIALFECPVGLPNGESIVATQSGSVRLSNNITLKNVLYVPKLNCNLLSVSQLTDDLHC 461

Query: 859  XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 1035
               F++  C IQDHT R LIG G   DG+Y F      S++   V  + +++ LWHKR+G
Sbjct: 462  IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVEHVSVHNAASTLELWHKRMG 520

Query: 1036 HPP*KL 1053
            HP  K+
Sbjct: 521  HPSEKV 526


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  100 bits (248), Expect(2) = 5e-38
 Identities = 49/103 (47%), Positives = 69/103 (66%)
 Frame = +3

Query: 1041 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 1220
            S KVV +L      SN   + +  C ICF  K PR+ F +S NKA+ IF+ IHCD+WG  
Sbjct: 191  SEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSY 247

Query: 1221 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            + +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 248  KHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 290



 Score = 86.3 bits (212), Expect(2) = 5e-38
 Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = +1

Query: 679  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 858
            F  + + + P+ + NG++  AT+ G +RLS+N+ L+NVL+VP L CN             
Sbjct: 70   FDTIALFECPVGLPNGESVVATQSGSVRLSNNITLQNVLYVPKLNCNLLSVSQLTDDLHC 129

Query: 859  XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 1035
               F++  C IQDHT R LIG G   DG+Y F      S+Q   V  + +++ LWHKR+G
Sbjct: 130  IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMG 188

Query: 1036 HPP*KL 1053
            HP  K+
Sbjct: 189  HPSEKV 194


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 80.1 bits (196), Expect(3) = 2e-37
 Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = +3

Query: 1041 SMKVVSMLHGAVSSSNK--SQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWG 1214
            S KV+ +L  + S+ +   S+TC+    IC   KQ R+ F +S NK S  F+++HCD+WG
Sbjct: 479  SSKVLKLLSFSDSTGHAFDSKTCE----ICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWG 534

Query: 1215 PIQILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            P +  S   S +FLT+VD+ +RA W++L+ +K       +NF ++
Sbjct: 535  PYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPMHLKNFISL 579



 Score = 72.4 bits (176), Expect(3) = 2e-37
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
 Frame = +1

Query: 703  PPLLVY--NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSN 876
            PP+++   +G+ TT+TK G++ L  +L L+ V FV  L C+                 ++
Sbjct: 367  PPIMIKLPDGRLTTSTKHGRVYLGSSLDLQEVFFVDGLHCHLISVSQLTRAKSCVFQITD 426

Query: 877  KFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHPP*KLF 1056
            K CIIQD     LIGAG   +G+Y F   R     A+   +  +S LWH RLGHP  K+ 
Sbjct: 427  KVCIIQDRITLTLIGAGKQQNGLYFF---RGTETVASMTRMDSSSQLWHCRLGHPSSKVL 483

Query: 1057 Q 1059
            +
Sbjct: 484  K 484



 Score = 52.8 bits (125), Expect(3) = 2e-37
 Identities = 28/81 (34%), Positives = 43/81 (53%)
 Frame = +3

Query: 456 SNMGATRAHDTLDLSDTDRGSAPTLTDEQWTQLMTAIKGQKSLSSSEKLAGMYDSNAWII 635
           S   AT +     L++ DR     L DEQW QL   +K +++ +S+   +  +   +WII
Sbjct: 287 STTAATSSMSGSQLTEADRVGISGLNDEQWKQLRQMLK-ERNFNSTNTKSSKFFLESWII 345

Query: 636 DSGASNHTSGNLALFYDCHDI 698
           DSGA+NH +G L    D  D+
Sbjct: 346 DSGATNHMTGTLEFLRDVCDM 366


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score = 97.1 bits (240), Expect(2) = 4e-37
 Identities = 48/103 (46%), Positives = 68/103 (66%)
 Frame = +3

Query: 1041 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 1220
            S KVV +L      SN   + +  C ICF  K  R+ F +S NKA+ IF+ IHCD+WG  
Sbjct: 277  SEKVVKLLPPV---SNLKGSLNKACEICFRAKHXRDKFPLSDNKATRIFEKIHCDLWGSY 333

Query: 1221 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            + +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 334  KHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 376



 Score = 86.3 bits (212), Expect(2) = 4e-37
 Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = +1

Query: 679  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 858
            F  + + + P+ + NG++  AT+ G +RLS+N+ L+NVL+VP L CN             
Sbjct: 156  FDTIALFECPVGLPNGESVVATQSGSVRLSNNITLQNVLYVPKLNCNLLSVSQLTDDLHC 215

Query: 859  XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 1035
               F++  C IQDHT R LIG G   DG+Y F      S+Q   V  + +++ LWHKR+G
Sbjct: 216  IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMG 274

Query: 1036 HPP*KL 1053
            HP  K+
Sbjct: 275  HPSEKV 280


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  100 bits (249), Expect(2) = 2e-35
 Identities = 49/107 (45%), Positives = 71/107 (66%)
 Frame = +3

Query: 1029 IRSSSMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDI 1208
            +R  S KVV +L      SN   + +  C ICF  K PR+ F +S NKA+ IF+ IHCD+
Sbjct: 232  MRHPSEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDL 288

Query: 1209 WGPIQILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
            WG  + +SS  +R+FLTIVDD SRA W++L++ K++V ++F +F AM
Sbjct: 289  WGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTDVFRMFMSFIAM 335



 Score = 77.4 bits (189), Expect(2) = 2e-35
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = +1

Query: 679  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 858
            F  + + + P+ + NG++  AT+   +RLS+N+ L+NVL+VP L CN             
Sbjct: 115  FDTIALFECPVGLPNGESVVATQSSSVRLSNNITLKNVLYVPKLNCNLLSVSQLTDDLHC 174

Query: 859  XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 1035
               F++  C IQDHT R LI  G   DG+Y F      S+Q   V  + +++ LWHKR+ 
Sbjct: 175  IVQFNSYMCAIQDHT-RELIRTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMR 233

Query: 1036 HPP*KL 1053
            HP  K+
Sbjct: 234  HPSEKV 239


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score = 96.7 bits (239), Expect(2) = 1e-34
 Identities = 45/102 (44%), Positives = 68/102 (66%)
 Frame = +3

Query: 1044 MKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQ 1223
            +K++ ++     S NK+      C ICF  K PR+ F +S NKA+ IF+ IHCD+W   +
Sbjct: 276  VKLLPLVSNIKGSLNKA------CEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWASYK 329

Query: 1224 ILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
             +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 330  HVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 371



 Score = 78.6 bits (192), Expect(2) = 1e-34
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = +1

Query: 679  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 858
            F  + + + P+ + NG++  AT+ G +RL +N+ L+NVL+V  L CN             
Sbjct: 151  FDTIALFECPVGLPNGESVVATQSGSVRLLNNITLKNVLYVSKLNCNLLSVSQLTDDLHC 210

Query: 859  XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 1035
               F++  C IQDHT R LIG G   DG+Y F      S+Q   V  + +++ LWH R+G
Sbjct: 211  IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHNRMG 269

Query: 1036 HPP*KL 1053
            HP  K+
Sbjct: 270  HPSEKV 275


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 75.9 bits (185), Expect(3) = 2e-30
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +3

Query: 1041 SMKVVSMLHGAV-SSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGP 1217
            S KV+ ++   V ++ N+++ CD    +CF  KQ R  FS S NKA + FDLIH      
Sbjct: 445  SFKVLGLIPEVVCNNKNENKVCD----VCFXAKQTRKMFSSSENKAKKCFDLIHX----- 495

Query: 1218 IQILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
                 S  + +FLTI DDCSR  W++L+  K+EVG   + F AM
Sbjct: 496  -----SCGAXYFLTIXDDCSRVVWIYLLNGKNEVGXXLKKFMAM 534



 Score = 69.3 bits (168), Expect(3) = 2e-30
 Identities = 41/120 (34%), Positives = 61/120 (50%)
 Frame = +1

Query: 694  ISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFS 873
            I+  P+ + +G    A K+G + L   L L NVLFVP L CN                 +
Sbjct: 331  IAPCPVGLPDGVEIMALKKGIVCLGGELKLHNVLFVPKLKCNLISVSQLLRDSGLVIQLT 390

Query: 874  NKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHPP*KL 1053
            +KFC+IQD + R +IGAG   +G+Y        S+ A K+    +  LWH+R+G+P  K+
Sbjct: 391  DKFCVIQDRSTRKVIGAGEQREGLYFLN--GAASVHAFKMNGVTSFELWHRRMGYPSFKV 448



 Score = 35.8 bits (81), Expect(3) = 2e-30
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +3

Query: 597 KLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGL 719
           +L G      WIIDSGASNH +       +  DI   PVGL
Sbjct: 298 RLMGKQSQLPWIIDSGASNHMTSVYTCMREVRDIAPCPVGL 338



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
 Frame = +2

Query: 2   DELSS-----ACKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLP 166
           DEL++      C    C C+      K  E + VHQF +GL+ + +GTV S +L  +PLP
Sbjct: 120 DELNNYDKMPVCNCVGCKCNLTIVLEKKREEERVHQFLMGLDEEGYGTVSSNILSTEPLP 179

Query: 167 SLNVAYVKVISDERKQAVTDSSDVTRXXXXXXXXXXXXSGRGEQRQ---YCTHCGRAGH 334
           +LN  Y  V+  ER + +T + +               + RGE +     CT+C R GH
Sbjct: 180 NLNRVYAMVVQQERMRTMTRTKEERGNLMSFAMKVGGQNSRGEXKDRNVVCTNCKREGH 238


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 94.7 bits (234), Expect(2) = 3e-30
 Identities = 46/93 (49%), Positives = 59/93 (63%)
 Frame = +3

Query: 1062 LHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSN 1241
            L    SS+  S +CD    +CF  KQ R  F  S+NK  E F LIHCD+WGP ++ +S  
Sbjct: 547  LFSKTSSTVTSHSCD----VCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCG 602

Query: 1242 SRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNF 1340
            + +FLTIVDD SRA W +L+L KSEV Q+  NF
Sbjct: 603  AVYFLTIVDDYSRAVWTYLLLEKSEVRQVLTNF 635



 Score = 65.5 bits (158), Expect(2) = 3e-30
 Identities = 38/119 (31%), Positives = 54/119 (45%)
 Frame = +1

Query: 685  IVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXX 864
            +V +   P+   +G    A   G + LS+ + L NVLFVP+L C                
Sbjct: 421  VVPVPPCPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLA 480

Query: 865  XFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 1041
             F++  C +QD + + LIG+G    GVY    V    +    V    A  LWH+RLGHP
Sbjct: 481  TFTDTLCFLQDRSSKTLIGSGEERGGVYYLTDVTPAKIHTANVDSDQA--LWHQRLGHP 537



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 21/128 (16%)
 Frame = +2

Query: 14  SACKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLPSLNVAYVKV 193
           + C    C C A SE  K  E + +HQF LGL+  +FG + + L+ MDPLPSL   Y +V
Sbjct: 177 TVCTCGLCRCGATSEPTKEREEEKIHQFVLGLDESRFGGLCATLINMDPLPSLGEIYSRV 236

Query: 194 ISDERKQAVTDSSD---------VTRXXXXXXXXXXXXSGRGEQ------------RQYC 310
           I +E++ A     +           R            S R E             R  C
Sbjct: 237 IREEQRLASVHVREQKEEAVGFLARREQLDHHSRVDASSSRSEHTGGSRSNSIIKGRVTC 296

Query: 311 THCGRAGH 334
           ++CGR GH
Sbjct: 297 SNCGRTGH 304


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 90.9 bits (224), Expect(3) = 1e-28
 Identities = 45/104 (43%), Positives = 67/104 (64%)
 Frame = +3

Query: 1038 SSMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGP 1217
            +S K+V++L   + SS K +  +  C  C   KQ R++F +S N++ + F LIHCD+WGP
Sbjct: 523  ASDKIVNLLPRELLSSGK-EILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGP 581

Query: 1218 IQILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
             +  S S +R+FLTIVDD SR  WV+LM  KSE  +  ++F A+
Sbjct: 582  YRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIAL 625



 Score = 48.1 bits (113), Expect(3) = 1e-28
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
 Frame = +3

Query: 495 LSDTDRGSAPTLTDEQW---TQLMTAIKGQKSLSSSEKLAGMYDS-NAWIIDSGASNHTS 662
           ++D+DR +   LTDEQW    +L+ A +     ++ E  +G      +WI+D+GAS+H +
Sbjct: 350 ITDSDRDAVSGLTDEQWRGVVKLLNAGRSDNKSNAHETQSGTCSLFTSWILDTGASHHMT 409

Query: 663 GNLALFYDCHDI*SSPV 713
           GNL L  D   +  SPV
Sbjct: 410 GNLELLSDMRSM--SPV 424



 Score = 36.2 bits (82), Expect(3) = 1e-28
 Identities = 27/115 (23%), Positives = 47/115 (40%)
 Frame = +1

Query: 709  LLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCI 888
            +++ +G    A  EG +RL  +L L++V +V  L  +                     C+
Sbjct: 426  IILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDLISVGQM---------MDENHCV 476

Query: 889  IQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHPP*KL 1053
              D T R +   G   +G + F+ +   +  A    +     LWH+RLGH   K+
Sbjct: 477  --DRTTRMVTRIGKRENGSFCFRGME--NAAAVHTSVKAPFDLWHRRLGHASDKI 527



 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
 Frame = +2

Query: 20  CKLSTCTCSAASEYVKLHELDHVHQFCLGLEPKKFGTVVSGLLLMDPLPSLNVAYVKVIS 199
           CK   C C+  ++  K  E D VHQ+  GL   KF T+ S L    PLP L   Y  V  
Sbjct: 168 CKCGRCICNLGTDQEKYREDDMVHQYLYGLNETKFHTIRSSLTSRVPLPGLEEVYNIVRQ 227

Query: 200 DE----RKQAVTDSSDVT------RXXXXXXXXXXXXSGRGEQRQYCTHCGRAGH 334
           +E     + +  + +DVT      R            S + + ++ CTHC R GH
Sbjct: 228 EEDMVNNRSSNEERTDVTAFAVQMRPRSEVISEKFANSEKLQNKKLCTHCNRGGH 282


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 80.9 bits (198), Expect(3) = 3e-27
 Identities = 40/97 (41%), Positives = 56/97 (57%)
 Frame = +3

Query: 1059 MLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSS 1238
            +LH  +    +++   + C IC   KQ   SF    N +   FDLIH D WGP    ++ 
Sbjct: 600  VLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTE 659

Query: 1239 NSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 1349
              ++FLTIVDD SRATWV+LM  K++V Q+F +F  M
Sbjct: 660  GYKYFLTIVDDYSRATWVYLMKAKNDVLQIFPDFLKM 696



 Score = 55.1 bits (131), Expect(3) = 3e-27
 Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
 Frame = +1

Query: 724  GKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDHT 903
            G N      G I+L+ NL L+NVL++P    N                F    C+IQD  
Sbjct: 479  GSNVKIAGIGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPI 538

Query: 904  LRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDA------------SMLWHKRLGHP 1041
                IG G    G+Y+   +   S++   V I+ +            S LWH RLGHP
Sbjct: 539  KEQKIGRGNQIGGLYV---LDTSSVECTSVDINSSVTEKQYCNAVVDSALWHSRLGHP 593



 Score = 34.7 bits (78), Expect(3) = 3e-27
 Identities = 21/47 (44%), Positives = 29/47 (61%)
 Frame = +3

Query: 579 SLSSSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGL 719
           SL+SS+K+  +   N WIIDSGA++H S +  LF    D  S+ V L
Sbjct: 433 SLTSSKKVLSL---NTWIIDSGATHHVSYDRNLFESLSDGLSNEVTL 476