BLASTX nr result
ID: Achyranthes22_contig00036472
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00036472
(361 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006830100.1| hypothetical protein AMTR_s04594p00003050, p... 55 3e-09
gb|ACY01934.1| hypothetical protein [Beta vulgaris] 46 2e-08
gb|ABA97805.1| retrotransposon protein, putative, Ty3-gypsy subc... 49 5e-08
ref|XP_002464710.1| hypothetical protein SORBIDRAFT_01g024853 [S... 50 7e-08
ref|XP_004289020.1| PREDICTED: uncharacterized protein LOC101300... 55 1e-07
gb|ABA97182.1| retrotransposon protein, putative, Ty3-gypsy subc... 47 3e-07
gb|AAX95925.1| retrotransposon protein, putative, Ty3-gypsy sub-... 47 4e-07
ref|XP_004308221.1| PREDICTED: uncharacterized protein LOC101312... 52 7e-07
emb|CAE03895.1| OSJNBb0026I12.3 [Oryza sativa Japonica Group] 45 1e-06
ref|XP_006495357.1| PREDICTED: uncharacterized protein K02A2.6-l... 46 1e-06
emb|CAN77020.1| hypothetical protein VITISV_034711 [Vitis vinifera] 39 1e-06
dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis t... 47 2e-06
gb|ABA97795.2| retrotransposon protein, putative, Ty3-gypsy subc... 45 2e-06
gb|ABA94001.1| retrotransposon protein, putative, Ty3-gypsy subc... 45 2e-06
emb|CAN63487.1| hypothetical protein VITISV_021708 [Vitis vinifera] 40 2e-06
gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsi... 47 2e-06
emb|CAD39882.2| OSJNBb0067G11.5 [Oryza sativa Japonica Group] 45 2e-06
gb|AAM15221.1| putative retroelement pol polyprotein [Arabidopsi... 46 2e-06
ref|XP_006494922.1| PREDICTED: uncharacterized protein LOC102616... 47 3e-06
dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis t... 47 3e-06
>ref|XP_006830100.1| hypothetical protein AMTR_s04594p00003050, partial [Amborella
trichopoda] gi|548835932|gb|ERM97516.1| hypothetical
protein AMTR_s04594p00003050, partial [Amborella
trichopoda]
Length = 171
Score = 55.1 bits (131), Expect(2) = 3e-09
Identities = 34/64 (53%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSN-C*TTDTTLTQGLPFHFY*RVFCIEAFSM*KQV 14
P VK VRSFLGHAGFY RFIK+FS L G+PF F C+EAF + K+
Sbjct: 44 PPISVKGVRSFLGHAGFYRRFIKDFSKVAKPLSNLLASGVPFEF--GKDCLEAFQILKEK 101
Query: 13 LISA 2
LISA
Sbjct: 102 LISA 105
Score = 32.0 bits (71), Expect(2) = 3e-09
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH IS I+VD A +S IE L PP
Sbjct: 20 LGHKISKEGIEVDRAKVSTIENLPPP 45
>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
Length = 1717
Score = 46.2 bits (108), Expect(2) = 2e-08
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDT-TLTQGLPFHFY*RVFCIEAFSM*KQV 14
P VK VR FLGHAGFY RFIK+FS T L + PF F C+ +F+ KQ
Sbjct: 1116 PPVNVKGVRGFLGHAGFYRRFIKDFSKIAKPLTQLLLKDAPFLFTNE--CLVSFNRIKQA 1173
Query: 13 LISA 2
LI+A
Sbjct: 1174 LITA 1177
Score = 37.4 bits (85), Expect(2) = 2e-08
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = -3
Query: 305 LSEGVVSIQVIVLYYLGHLISAWDIQVDMANISVIEQLSPP 183
++EGVV LGH+IS IQVD A I VIEQL PP
Sbjct: 1086 VTEGVV---------LGHIISERGIQVDKAKIQVIEQLPPP 1117
>gb|ABA97805.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1019
Score = 48.9 bits (115), Expect(2) = 5e-08
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTT-LTQGLPFHFY*RVFCIEAFSM*KQV 14
P +K +RSFLGHAGFY RFIK+FS T L + PF F C+E+F + K+
Sbjct: 406 PPVNIKGIRSFLGHAGFYRRFIKDFSTIAGPLTNLLAKDAPFEF--DDACLESFEILKKA 463
Query: 13 LIS 5
L+S
Sbjct: 464 LVS 466
Score = 33.5 bits (75), Expect(2) = 5e-08
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH +S +I+VD A I VI+QL PP
Sbjct: 382 LGHRVSEREIEVDHAKIDVIDQLPPP 407
>ref|XP_002464710.1| hypothetical protein SORBIDRAFT_01g024853 [Sorghum bicolor]
gi|241918564|gb|EER91708.1| hypothetical protein
SORBIDRAFT_01g024853 [Sorghum bicolor]
Length = 196
Score = 50.1 bits (118), Expect(2) = 7e-08
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDT-TLTQGLPFHFY*RVFCIEAFSM*KQV 14
PL +K +RSFLGHAGFY RFIK+ S T L + +PF F C++AF + K+
Sbjct: 49 PLVNIKGIRSFLGHAGFYHRFIKDISFIARPLTRLLAKDVPFEF--DDACLQAFVILKKA 106
Query: 13 LISA 2
LISA
Sbjct: 107 LISA 110
Score = 32.0 bits (71), Expect(2) = 7e-08
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSP 186
LGHL+S I+VD A I VIE+L P
Sbjct: 25 LGHLVSERGIEVDKAKIQVIERLPP 49
>ref|XP_004289020.1| PREDICTED: uncharacterized protein LOC101300186 [Fragaria vesca
subsp. vesca]
Length = 837
Score = 54.7 bits (130), Expect(2) = 1e-07
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -1
Query: 178 VKEVRSFLGHAGFYCRFIKNFSNC*TTDTTLTQGLPFHFY*RVFCIEAFSM*KQVLISA 2
V++VRSFLGHAGFY RFIK+FS + L + +PFHF C EAF K +L SA
Sbjct: 648 VRDVRSFLGHAGFYRRFIKDFSKIARPLSLLQKDVPFHF--DAECKEAFERLKTMLTSA 704
Score = 26.6 bits (57), Expect(2) = 1e-07
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPPGS 177
LGH++S+ I+VD + I ++ L P S
Sbjct: 620 LGHIVSSRGIEVDKSKIDLVRHLPIPTS 647
>gb|ABA97182.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 759
Score = 47.0 bits (110), Expect(2) = 3e-07
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTT-LTQGLPFHFY*RVFCIEAFSM*KQV 14
P +K +RSFLGH+ FY RFIK+FS T L + PF F C+++F + K+
Sbjct: 270 PPMNIKGIRSFLGHSSFYRRFIKDFSTIVKPLTNLLAKDAPFEF--DDACLKSFEILKKA 327
Query: 13 LISA 2
LISA
Sbjct: 328 LISA 331
Score = 32.7 bits (73), Expect(2) = 3e-07
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH +S I+VD A I VI+QL PP
Sbjct: 246 LGHRVSKRGIEVDRAKIEVIDQLPPP 271
>gb|AAX95925.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550633|gb|ABA93430.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 441
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTT-LTQGLPFHFY*RVFCIEAFSM*KQV 14
P +K + SFLGHAGFY RFIK+FS T L + PF F C+++F + K+
Sbjct: 348 PPVNIKGIHSFLGHAGFYRRFIKDFSTIARPLTNLLAKDAPFGF--DDACLKSFEILKKA 405
Query: 13 LISA 2
L+SA
Sbjct: 406 LVSA 409
Score = 32.7 bits (73), Expect(2) = 4e-07
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH +S I+VD A I VI+QL PP
Sbjct: 324 LGHRVSERGIEVDRAKIDVIDQLPPP 349
>ref|XP_004308221.1| PREDICTED: uncharacterized protein LOC101312974 [Fragaria vesca
subsp. vesca]
Length = 1160
Score = 52.0 bits (123), Expect(2) = 7e-07
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -1
Query: 178 VKEVRSFLGHAGFYCRFIKNFSN-C*TTDTTLTQGLPFHFY*RVFCIEAFSM*KQVLISA 2
V++VRSFLGHAGFY RFIK+FS + L + +PFHF C EAF K +L SA
Sbjct: 684 VRDVRSFLGHAGFYRRFIKDFSKIARPLSSLLPKDVPFHF--DAECKEAFERLKTMLTSA 741
Score = 26.6 bits (57), Expect(2) = 7e-07
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPPGS 177
LGH++S+ I+VD + I ++ L P S
Sbjct: 656 LGHIVSSRGIEVDKSKIDLVRHLPIPTS 683
>emb|CAE03895.1| OSJNBb0026I12.3 [Oryza sativa Japonica Group]
Length = 589
Score = 45.4 bits (106), Expect(2) = 1e-06
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTT-LTQGLPFHFY*RVFCIEAFSM*KQV 14
P +K +R+FLGHAGF+ RFIK FS T L + PF F C+++F K+
Sbjct: 193 PPVNIKGIRNFLGHAGFHRRFIKEFSTIARPLTNLLAKDAPFEF--DDVCLKSFKTLKKA 250
Query: 13 LISA 2
L+SA
Sbjct: 251 LVSA 254
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH +S I+VD A I VI+QL PP
Sbjct: 169 LGHRVSERGIEVDRAKIEVIDQLPPP 194
>ref|XP_006495357.1| PREDICTED: uncharacterized protein K02A2.6-like, partial [Citrus
sinensis]
Length = 487
Score = 45.8 bits (107), Expect(2) = 1e-06
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSN-C*TTDTTLTQGLPFHFY*RVFCIEAFSM*KQV 14
P VK +RSFLGHAGFY RFIK+FS + L PFHF ++AF K+
Sbjct: 32 PPTSVKGIRSFLGHAGFYRRFIKDFSKVAKPLCSLLEHDKPFHF--DKDYLQAFRELKKA 89
Query: 13 LISA 2
LI+A
Sbjct: 90 LITA 93
Score = 32.0 bits (71), Expect(2) = 1e-06
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPPGS 177
LGH IS I+VD A I VI++L PP S
Sbjct: 8 LGHKISKNGIEVDKAKIEVIDKLPPPTS 35
>emb|CAN77020.1| hypothetical protein VITISV_034711 [Vitis vinifera]
Length = 925
Score = 38.5 bits (88), Expect(3) = 1e-06
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFS 113
P VK VR FLGHAGFY RFI +FS
Sbjct: 415 PPTNVKGVRQFLGHAGFYRRFIMDFS 440
Score = 31.2 bits (69), Expect(3) = 1e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH+IS I+V+ AN+ +I +L PP
Sbjct: 391 LGHIISKNGIEVBKANVELIVKLPPP 416
Score = 26.9 bits (58), Expect(3) = 1e-06
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -2
Query: 117 SLIAKPLIQLLLKGSPFIFTDEC 49
S I+KPL +LL+K + F++ ++C
Sbjct: 440 SKISKPLCELLVKDAKFVWDEKC 462
>dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1864
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDT-TLTQGLPFHFY*RVFCIEAFSM*KQV 14
P + VK++RSFLGHAGFY RFIK+FS T L + F F C+ AF + K+
Sbjct: 1200 PPKTVKDIRSFLGHAGFYRRFIKDFSKLARPLTRLLCKETEFAFDDE--CLTAFKLIKEA 1257
Query: 13 LISA 2
LI+A
Sbjct: 1258 LITA 1261
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH IS I+VD A + V+ QL PP
Sbjct: 1176 LGHKISEEGIEVDKAKVDVMMQLQPP 1201
>gb|ABA97795.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 672
Score = 44.7 bits (104), Expect(2) = 2e-06
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTT-LTQGLPFHFY*RVFCIEAFSM*KQV 14
P +K +RSFLGHAGFY RF K+ S T L + PF F C+++F + K+
Sbjct: 450 PPVNIKIIRSFLGHAGFYRRFTKDLSTITRPLTNLLAKDAPFQF--DDACLKSFEVLKKA 507
Query: 13 LISA 2
L+SA
Sbjct: 508 LVSA 511
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH +S I+VD A I VI+QL PP
Sbjct: 426 LGHQVSERGIEVDRAKIDVIDQLPPP 451
>gb|ABA94001.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 610
Score = 44.7 bits (104), Expect(2) = 2e-06
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTT-LTQGLPFHFY*RVFCIEAFSM*KQV 14
P +K +RSFLGHA FY RFIK+FS T L + PF F C+++F + K+
Sbjct: 36 PPVNIKGIRSFLGHASFYRRFIKDFSTIARPLTNLLAKDAPFEF--DDACLKSFEILKKA 93
Query: 13 LISA 2
L+ A
Sbjct: 94 LVYA 97
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH +S I+VD A I+VI+QL PP
Sbjct: 12 LGHRVSKRGIEVDHAKINVIDQLPPP 37
>emb|CAN63487.1| hypothetical protein VITISV_021708 [Vitis vinifera]
Length = 1460
Score = 39.7 bits (91), Expect(3) = 2e-06
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFS 113
P VK +R F+GHAGFY RFIK+FS
Sbjct: 1115 PPTNVKGIRQFIGHAGFYRRFIKDFS 1140
Score = 29.6 bits (65), Expect(3) = 2e-06
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH+IS I+VD A + +I +L PP
Sbjct: 1091 LGHIISKNGIEVDKAKVELIVKLPPP 1116
Score = 26.9 bits (58), Expect(3) = 2e-06
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -2
Query: 117 SLIAKPLIQLLLKGSPFIFTDEC 49
S I+KPL +LL+K + F++ ++C
Sbjct: 1140 SKISKPLCELLVKDAKFVWDEKC 1162
>gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1664
Score = 46.6 bits (109), Expect(2) = 2e-06
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDT-TLTQGLPFHFY*RVFCIEAFSM*KQV 14
P + VK++RSFLGHAGFY RFIK+FS T L + F F C+++F K+
Sbjct: 1550 PPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFEF--DEDCLKSFHTIKEA 1607
Query: 13 LISA 2
L+SA
Sbjct: 1608 LVSA 1611
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH IS I+VD I VI QL PP
Sbjct: 1526 LGHKISKKGIEVDKGKIKVIMQLQPP 1551
>emb|CAD39882.2| OSJNBb0067G11.5 [Oryza sativa Japonica Group]
Length = 791
Score = 44.7 bits (104), Expect(2) = 2e-06
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTT-LTQGLPFHFY*RVFCIEAFSM*KQV 14
P +K + SF GHAGFY RFIK+FS T L + P F C+++F + K+
Sbjct: 682 PPMNIKGIHSFFGHAGFYRRFIKDFSTIARPLTNLLAKDAPIEF--DDVCLKSFEILKKA 739
Query: 13 LISA 2
L+SA
Sbjct: 740 LVSA 743
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH +S ++VD A I VI+QL PP
Sbjct: 658 LGHRVSERGVEVDRAKIDVIDQLPPP 683
>gb|AAM15221.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 622
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDT-TLTQGLPFHFY*RVFCIEAFSM*KQV 14
P + VK++RSFLGHA FY RFIK+FS T L + F+F C++AF + K+
Sbjct: 277 PPKTVKDIRSFLGHAEFYRRFIKDFSKIARPLTRLLCKETEFNF--DEDCLKAFHLIKET 334
Query: 13 LISA 2
L+SA
Sbjct: 335 LVSA 338
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH IS I+VD A I V+ QL PP
Sbjct: 253 LGHKISGKGIEVDKAKIDVMIQLQPP 278
>ref|XP_006494922.1| PREDICTED: uncharacterized protein LOC102616968 [Citrus sinensis]
Length = 1015
Score = 46.6 bits (109), Expect(2) = 3e-06
Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDTTLTQ-GLPFHFY*RVFCIEAFSM*KQV 14
P V+EVRSFLGHAGFY RFIK+FS L Q F F C AF K+V
Sbjct: 479 PPTSVREVRSFLGHAGFYRRFIKDFSKIALPLCNLLQKDATFDF--NEECQRAFKKLKEV 536
Query: 13 LISA 2
L SA
Sbjct: 537 LTSA 540
Score = 30.0 bits (66), Expect(2) = 3e-06
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPPGS 177
LGH+IS I+VD + I +I L PP S
Sbjct: 455 LGHVISEKGIEVDKSKIDLIRSLPPPTS 482
>dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 897
Score = 47.4 bits (111), Expect(2) = 3e-06
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 PLQGVKEVRSFLGHAGFYCRFIKNFSNC*TTDT-TLTQGLPFHFY*RVFCIEAFSM*KQV 14
P + VKE+RSFLGHAGFY RFIK+FS T L + F F C+++F K
Sbjct: 283 PPKTVKEIRSFLGHAGFYRRFIKDFSKIVRPLTRLLCKETEFEF--DEDCLKSFQTIKDA 340
Query: 13 LISA 2
L+SA
Sbjct: 341 LVSA 344
Score = 28.9 bits (63), Expect(2) = 3e-06
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 260 LGHLISAWDIQVDMANISVIEQLSPP 183
LGH IS I+VD + V+ QL PP
Sbjct: 259 LGHKISEKGIEVDKGKVEVMMQLQPP 284