BLASTX nr result

ID: Achyranthes22_contig00036383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00036383
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                    78   1e-12
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                 69   7e-10
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...    59   7e-07
emb|CAA73042.1| polyprotein [Ananas comosus]                           58   1e-06

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = +3

Query: 6    IELFHHGEASVKVNALSVEPELYADLRLKQRQDPKLEAIRKAKVSGQAFDFHIEADDSLK 185
            IE+ H GE    ++AL++EP    ++R  Q  D KLE ++     G+A  F I  D S++
Sbjct: 1026 IEVVHEGEVERLLSALTIEPNFLEEIRASQPGDVKLERVKAKLKEGKAEGFAIHEDGSIR 1085

Query: 186  FKGKWCVPNDA-ELKWQIFDEAHNTPYYV 269
            +KG+WCVP    ELK +I  E HNT YYV
Sbjct: 1086 YKGRWCVPQKCEELKQKIMSEGHNTTYYV 1114


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = +3

Query: 6    IELFHHGEASVKVNALSVEPELYADLRLKQRQDPKLEAIRKAKVSGQAFDFHIEADDSLK 185
            +E+ + GE+  +++ LS+   ++ ++   Q  D  L+ I++    G+  DF I  D SL+
Sbjct: 994  LEILNPGESEARLSNLSLGVSIFDEIIEGQVGDEHLDKIKEKMKQGKEIDFKIHEDGSLR 1053

Query: 186  FKGKWCVPNDA-ELKWQIFDEAHNTPYYV 269
            FKG+WCVP    +LK ++ DE HNTPY V
Sbjct: 1054 FKGRWCVPQKCNDLKRRLMDEGHNTPYSV 1082


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = +3

Query: 42  VNALSVEPELYADLRLKQRQDPKLEAIRKAKVSGQAFDFHIEADDSLKFKGKWCVPNDAE 221
           VNAL V+P L + +R KQ +D  ++ I+K    G+A  F  +   ++ F  + CVPN  E
Sbjct: 567 VNALEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICVPNQQE 626

Query: 222 LKWQIFDEAHNTPYYV 269
           LK  I  EAH +PY +
Sbjct: 627 LKQSILKEAHESPYSI 642


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/81 (33%), Positives = 46/81 (56%)
 Frame = +3

Query: 27  EASVKVNALSVEPELYADLRLKQRQDPKLEAIRKAKVSGQAFDFHIEADDSLKFKGKWCV 206
           +  +++  L V+P L   ++ KQ  D +L+ I+   V G   DF ++ D  ++F+G+ CV
Sbjct: 458 DTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICV 517

Query: 207 PNDAELKWQIFDEAHNTPYYV 269
           P D+ +K  I  EAH  PY +
Sbjct: 518 PADSGIKEDILQEAHRAPYAI 538


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