BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00036156
         (1420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   605   e-170
gb|EOX93918.1| Pentatricopeptide repeat-containing protein, puta...   596   e-168
ref|XP_004228653.1| PREDICTED: pentatricopeptide repeat-containi...   595   e-167
ref|XP_006395140.1| hypothetical protein EUTSA_v10004021mg [Eutr...   594   e-167
ref|XP_006354206.1| PREDICTED: pentatricopeptide repeat-containi...   593   e-167
ref|XP_006280306.1| hypothetical protein CARUB_v10026229mg, part...   592   e-166
ref|NP_199684.2| pentatricopeptide repeat-containing protein [Ar...   586   e-165
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,...   583   e-164
gb|EXB96384.1| hypothetical protein L484_023104 [Morus notabilis]     581   e-163
ref|XP_006443594.1| hypothetical protein CICLE_v10019744mg [Citr...   579   e-162
ref|XP_004299861.1| PREDICTED: pentatricopeptide repeat-containi...   578   e-162
ref|XP_002303044.1| pentatricopeptide repeat-containing family p...   577   e-162
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   575   e-161
ref|XP_004514268.1| PREDICTED: pentatricopeptide repeat-containi...   574   e-161
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi...   574   e-161
ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containi...   574   e-161
gb|EMJ01149.1| hypothetical protein PRUPE_ppb003056mg [Prunus pe...   573   e-161
gb|ESW12606.1| hypothetical protein PHAVU_008G126700g [Phaseolus...   568   e-159
ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containi...   562   e-157
ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group] g...   559   e-157

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Vitis vinifera]
            gi|297744374|emb|CBI37344.3| unnamed protein product
            [Vitis vinifera]
          Length = 497

 Score =  605 bits (1559), Expect = e-170
 Identities = 304/375 (81%), Positives = 333/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAISVILRREATKAVIE K     S K+LLPRTVLEALHERITALRWESALKVFEL
Sbjct: 69   IASKKAISVILRREATKAVIEKKRGPNNS-KKLLPRTVLEALHERITALRWESALKVFEL 127

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWYRP+ GIYIKLIVMLGKCKQP KAH LF AM+DEGCV+NHE YTALLSAYSRS 
Sbjct: 128  LREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSG 187

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
             FD+AFSLL+ MKN+ DC+PDV+TYS+LIKSCLQV  FDKV +LLSDM +QGIKPNTVTY
Sbjct: 188  LFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTY 247

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGKA RFAEMES L EML    CEPDVWTMNSTLRAFG+SGQIE MEKCYEKFQ
Sbjct: 248  NTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQ 307

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGIEPNI+TFNILLDSYGK+  Y+KMS+VME+MQ+YH+SW+IVTYNV+IDAFGR  DLK
Sbjct: 308  SAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLK 367

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLM++ERIKP+CVT CSLVRAYGRAGKAEKIG VLR IEN+DV LD VFFNCLV
Sbjct: 368  QMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLV 427

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGR+  FAEM  V
Sbjct: 428  DAYGRLGCFAEMKGV 442



 Score =  136 bits (343), Expect = 2e-29
 Identities = 86/316 (27%), Positives = 158/316 (50%), Gaps = 11/316 (3%)
 Frame = +2

Query: 422  HERITALR--------WESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELF 577
            HE  TAL         ++ A  + E M+     +P    Y  LI    +     K   L 
Sbjct: 173  HEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLL 232

Query: 578  QAMVDEGCVINHETYTALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQ 757
              M ++G   N  TY  L+ AY ++ +F E  S L  M     C PDV+T +  +++   
Sbjct: 233  SDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGS 292

Query: 758  VFEFDKVRMLLSDMESQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVW 937
              + + +       +S GI+PN  T+N L+D+YGKA ++ +M S + E +   H    + 
Sbjct: 293  SGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKM-SAVMEYMQKYHFSWTIV 351

Query: 938  TMNSTLRAFGNSGQIEMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFM 1117
            T N  + AFG +G ++ ME  +   +   I+P+  T   L+ +YG++G  +K+  V+ F+
Sbjct: 352  TYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFI 411

Query: 1118 QEYHYSWSIVTYNVLIDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAY---GRA 1288
            +       IV +N L+DA+GR+    +M+ +  +M+ +  KP+ +T+ ++++AY   G  
Sbjct: 412  ENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMT 471

Query: 1289 GKAEKIGSVLRVIENT 1336
              A+++  ++R+ + T
Sbjct: 472  SCAKELQGLMRMPDET 487


>gb|EOX93918.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 515

 Score =  596 bits (1537), Expect = e-168
 Identities = 294/375 (78%), Positives = 331/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAISV+LRREATKA+IE K     S K+LLPRTVLEALH+RITALRWESALKVFEL
Sbjct: 86   IASRKAISVVLRREATKALIEKKRGPNNS-KKLLPRTVLEALHDRITALRWESALKVFEL 144

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWYRP+  IY+KLIVMLGKCKQP KAH+LFQAM+DEGC++NHE YTALLSAY RS 
Sbjct: 145  LREQLWYRPNSAIYVKLIVMLGKCKQPEKAHDLFQAMIDEGCIVNHEAYTALLSAYGRSA 204

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
             FD+AFSLL+ MK++ +C PDV TYSILIKSCLQV  FDKV+ LLSDM SQGI+PNTVTY
Sbjct: 205  LFDKAFSLLEEMKDTPNCHPDVQTYSILIKSCLQVLAFDKVQALLSDMASQGIRPNTVTY 264

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGKA  F EME  L EML  + C PDVWTMNST+RAFG+SGQIE MEKCYEKFQ
Sbjct: 265  NTLIDAYGKAKMFQEMEMTLVEMLREKDCGPDVWTMNSTIRAFGSSGQIETMEKCYEKFQ 324

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGI+PNI+TFNILLDSYGK+GNYDKMS+VME+MQ+YHYSW+IVTYNV+IDAFGR  DLK
Sbjct: 325  RAGIQPNIKTFNILLDSYGKTGNYDKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLK 384

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLM++ERIKP+CVT CSLVRAYG+AGKAEKI  VLR IEN+DVTLD+VFFNCLV
Sbjct: 385  QMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKAEKIAGVLRFIENSDVTLDTVFFNCLV 444

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGRM  F+EM  V
Sbjct: 445  DAYGRMGCFSEMKGV 459



 Score =  134 bits (338), Expect = 7e-29
 Identities = 84/316 (26%), Positives = 152/316 (48%), Gaps = 8/316 (2%)
 Frame = +2

Query: 422  HERITALR--------WESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELF 577
            HE  TAL         ++ A  + E M++     P    Y  LI    +     K   L 
Sbjct: 190  HEAYTALLSAYGRSALFDKAFSLLEEMKDTPNCHPDVQTYSILIKSCLQVLAFDKVQALL 249

Query: 578  QAMVDEGCVINHETYTALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQ 757
              M  +G   N  TY  L+ AY ++  F E    L  M    DC PDV+T +  I++   
Sbjct: 250  SDMASQGIRPNTVTYNTLIDAYGKAKMFQEMEMTLVEMLREKDCGPDVWTMNSTIRAFGS 309

Query: 758  VFEFDKVRMLLSDMESQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVW 937
              + + +       +  GI+PN  T+N L+D+YGK G + +M S + E +   H    + 
Sbjct: 310  SGQIETMEKCYEKFQRAGIQPNIKTFNILLDSYGKTGNYDKM-SAVMEYMQKYHYSWTIV 368

Query: 938  TMNSTLRAFGNSGQIEMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFM 1117
            T N  + AFG +G ++ ME  +   +   I+P+  T   L+ +YG++G  +K++ V+ F+
Sbjct: 369  TYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKAEKIAGVLRFI 428

Query: 1118 QEYHYSWSIVTYNVLIDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKA 1297
            +    +   V +N L+DA+GR+    +M+ +  +M+ +  KP+ VT+ ++++AY  +   
Sbjct: 429  ENSDVTLDTVFFNCLVDAYGRMGCFSEMKGVLEMMKQKGYKPDKVTYRTMIKAYSISRMT 488

Query: 1298 EKIGSVLRVIENTDVT 1345
              +  +  ++E+   T
Sbjct: 489  SHVKELRDLLESASGT 504


>ref|XP_004228653.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Solanum lycopersicum]
          Length = 488

 Score =  595 bits (1534), Expect = e-167
 Identities = 293/375 (78%), Positives = 333/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IASQKA+S+ILRREA KAVIE K KKG S K+LLPRTVLEALHERITALRWESALKVFEL
Sbjct: 69   IASQKAVSIILRREAAKAVIEYKKKKGNS-KKLLPRTVLEALHERITALRWESALKVFEL 127

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            ++EQLWYRP+PGIYIKLIVMLGKCK+P KA  LF+ MV+EGCV+N E YTALLSAYSRS 
Sbjct: 128  LQEQLWYRPNPGIYIKLIVMLGKCKEPEKAQSLFEMMVEEGCVVNQEAYTALLSAYSRSG 187

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
            +F EAFS+L+ MKN  +C PDV+TYSILIKSCLQV++FDKV++LLSDME  GIK NTVTY
Sbjct: 188  RFHEAFSILEEMKNIPNCLPDVFTYSILIKSCLQVYDFDKVQILLSDMECLGIKANTVTY 247

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLID+YGKA RF EMES L EML  + C+PDVWTMNSTLRAFG SGQIEMMEKCYEKFQ
Sbjct: 248  NTLIDSYGKAKRFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEKFQ 307

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGIEP+I+TFNILLDSYGK+ NY+KM +VMEFMQ+YH+SW+IVTYN++IDAFGR  DLK
Sbjct: 308  SAGIEPSIKTFNILLDSYGKTENYEKMGAVMEFMQKYHFSWTIVTYNIVIDAFGRAGDLK 367

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QME+LFRLMQ+ERIKPNCVT CSLVRAYG+AGKAEK+G+VLR IEN+DV LD+VFFNCLV
Sbjct: 368  QMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNCLV 427

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYG M  F E+  V
Sbjct: 428  DAYGMMGCFTELKGV 442



 Score =  131 bits (330), Expect = 6e-28
 Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 3/299 (1%)
 Frame = +2

Query: 443  RWESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETY 622
            R+  A  + E M+      P    Y  LI    +     K   L   M   G   N  TY
Sbjct: 188  RFHEAFSILEEMKNIPNCLPDVFTYSILIKSCLQVYDFDKVQILLSDMECLGIKANTVTY 247

Query: 623  TALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDME 802
              L+ +Y ++ +F E  S L  M    DC+PDV+T +  +++     + + +       +
Sbjct: 248  NTLIDSYGKAKRFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEKFQ 307

Query: 803  SQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQI 982
            S GI+P+  T+N L+D+YGK   + +M + + E +   H    + T N  + AFG +G +
Sbjct: 308  SAGIEPSIKTFNILLDSYGKTENYEKMGAVM-EFMQKYHFSWTIVTYNIVIDAFGRAGDL 366

Query: 983  EMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVL 1162
            + ME  +   Q   I+PN  T   L+ +YGK+G  +K+ +V+ F++    +   V +N L
Sbjct: 367  KQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNCL 426

Query: 1163 IDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAY---GRAGKAEKIGSVLRVIE 1330
            +DA+G +    +++ +  +M+    KP+ +T+ S+++AY   G   KA ++ ++L  +E
Sbjct: 427  VDAYGMMGCFTELKGVLEMMEQSGCKPDKITYRSMIKAYSVNGMTNKASELRNILASLE 485


>ref|XP_006395140.1| hypothetical protein EUTSA_v10004021mg [Eutrema salsugineum]
            gi|557091779|gb|ESQ32426.1| hypothetical protein
            EUTSA_v10004021mg [Eutrema salsugineum]
          Length = 513

 Score =  594 bits (1532), Expect = e-167
 Identities = 290/375 (77%), Positives = 333/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAIS+ILRREATKA+IE K     + K+LLPRTVLE+LHERITALRWESAL+VFEL
Sbjct: 86   IASRKAISIILRREATKAIIEKK-NGPTNSKKLLPRTVLESLHERITALRWESALQVFEL 144

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWY+P+ GIY+KLI+MLGKCKQP KAHELF+AM+ EGCV+NHE YTAL+SAYSRS 
Sbjct: 145  LREQLWYKPNVGIYVKLIIMLGKCKQPEKAHELFEAMISEGCVVNHEVYTALVSAYSRSG 204

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
            +FD+AF+LL+ MK+S +C+PDV+TYSILIKS LQVF FDKV+ LLSDM  QGI+PNT+TY
Sbjct: 205  RFDDAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITY 264

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGKA  F EMES L +ML  + C+PD WTMNSTLRAFG +GQIEMME CY+KFQ
Sbjct: 265  NTLIDAYGKAKMFVEMESTLIQMLGEEDCKPDSWTMNSTLRAFGGTGQIEMMENCYDKFQ 324

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             +GIEPNIRTFNILLDSYGK+GNY KMS+VMEFMQ+YHYSW+I+TYNV+IDAFGR  DLK
Sbjct: 325  SSGIEPNIRTFNILLDSYGKTGNYKKMSAVMEFMQKYHYSWTIITYNVVIDAFGRAGDLK 384

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLMQ+ERIKP+CVT CSLVRAYGRAGKAEKIG VLR IEN+D+ LD VFFNCLV
Sbjct: 385  QMEYLFRLMQSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDIRLDLVFFNCLV 444

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGRME FAEM  V
Sbjct: 445  DAYGRMEKFAEMKGV 459



 Score =  142 bits (358), Expect = 3e-31
 Identities = 86/312 (27%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
 Frame = +2

Query: 422  HERITAL--------RWESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELF 577
            HE  TAL        R++ A  + E M+     +P    Y  LI    +     K  +L 
Sbjct: 190  HEVYTALVSAYSRSGRFDDAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 249

Query: 578  QAMVDEGCVINHETYTALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQ 757
              M  +G   N  TY  L+ AY ++  F E  S L  M    DC+PD +T +  +++   
Sbjct: 250  SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEEDCKPDSWTMNSTLRAFGG 309

Query: 758  VFEFDKVRMLLSDMESQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVW 937
              + + +       +S GI+PN  T+N L+D+YGK G + +M S + E +   H    + 
Sbjct: 310  TGQIEMMENCYDKFQSSGIEPNIRTFNILLDSYGKTGNYKKM-SAVMEFMQKYHYSWTII 368

Query: 938  TMNSTLRAFGNSGQIEMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFM 1117
            T N  + AFG +G ++ ME  +   Q   I+P+  T   L+ +YG++G  +K+  V+ F+
Sbjct: 369  TYNVVIDAFGRAGDLKQMEYLFRLMQSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFI 428

Query: 1118 QEYHYSWSIVTYNVLIDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKA 1297
            +       +V +N L+DA+GR+    +M+ +  +M+ +  KP+ +T+ ++V+AY  +G  
Sbjct: 429  ENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLEIMEKKGFKPDKITYRTMVKAYRISGMT 488

Query: 1298 EKIGSVLRVIEN 1333
              +  +  ++E+
Sbjct: 489  SHVKELHGMVES 500


>ref|XP_006354206.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Solanum tuberosum]
          Length = 488

 Score =  593 bits (1530), Expect = e-167
 Identities = 292/375 (77%), Positives = 333/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IASQKA+S+ILRREA KAVIE K KKG S K+LLPRTVLEALHERITALRWESALKVFEL
Sbjct: 69   IASQKAVSIILRREAAKAVIEYKKKKGNS-KKLLPRTVLEALHERITALRWESALKVFEL 127

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            ++EQLWYRP+PGIYIKLIVMLGKCK+P KA  LF+ MV+EGCV+N E YTALLSAYSRS 
Sbjct: 128  LQEQLWYRPNPGIYIKLIVMLGKCKEPEKAQSLFEMMVEEGCVVNQEAYTALLSAYSRSG 187

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
            +F EAFS+L+ MKN  +C PDV+TYSILIKSCLQV++FDKV++LLSDME  GIK NTVTY
Sbjct: 188  RFHEAFSILEEMKNIPNCLPDVFTYSILIKSCLQVYDFDKVQILLSDMECMGIKANTVTY 247

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLID+YGKA RF EMES L EML  + C+PDVWTMNSTLRAFG SGQIEMMEKCYEKFQ
Sbjct: 248  NTLIDSYGKAKRFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEKFQ 307

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGIEP+I+TFNILLDSYGK+ NY+KM +VMEFMQ+Y++SW+IVTYN++IDAFGR  DLK
Sbjct: 308  SAGIEPSIKTFNILLDSYGKTENYEKMGAVMEFMQKYYFSWTIVTYNIVIDAFGRAGDLK 367

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QME+LFRLMQ+ERIKPNCVT CSLVRAYG+AGKAEK+G+VLR IEN+DV LD+VFFNCLV
Sbjct: 368  QMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNCLV 427

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYG M  F E+  V
Sbjct: 428  DAYGMMGCFTELKGV 442



 Score =  129 bits (323), Expect = 4e-27
 Identities = 80/299 (26%), Positives = 148/299 (49%), Gaps = 3/299 (1%)
 Frame = +2

Query: 443  RWESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETY 622
            R+  A  + E M+      P    Y  LI    +     K   L   M   G   N  TY
Sbjct: 188  RFHEAFSILEEMKNIPNCLPDVFTYSILIKSCLQVYDFDKVQILLSDMECMGIKANTVTY 247

Query: 623  TALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDME 802
              L+ +Y ++ +F E  S L  M    DC+PDV+T +  +++     + + +       +
Sbjct: 248  NTLIDSYGKAKRFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEKFQ 307

Query: 803  SQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQI 982
            S GI+P+  T+N L+D+YGK   + +M + + E +   +    + T N  + AFG +G +
Sbjct: 308  SAGIEPSIKTFNILLDSYGKTENYEKMGAVM-EFMQKYYFSWTIVTYNIVIDAFGRAGDL 366

Query: 983  EMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVL 1162
            + ME  +   Q   I+PN  T   L+ +YGK+G  +K+ +V+ F++    +   V +N L
Sbjct: 367  KQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNCL 426

Query: 1163 IDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAY---GRAGKAEKIGSVLRVIE 1330
            +DA+G +    +++ +  +M+    KP+ +T+ S+++AY   G   KA ++ ++L  +E
Sbjct: 427  VDAYGMMGCFTELKGVLEMMEQSGCKPDKITYRSMIKAYSINGMTNKASELRNLLASLE 485


>ref|XP_006280306.1| hypothetical protein CARUB_v10026229mg, partial [Capsella rubella]
            gi|482549010|gb|EOA13204.1| hypothetical protein
            CARUB_v10026229mg, partial [Capsella rubella]
          Length = 521

 Score =  592 bits (1526), Expect = e-166
 Identities = 293/375 (78%), Positives = 333/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAIS+ILRREATKA+IE K  KG   K+LLPRTVLE+LHERITALRWESAL+VFEL
Sbjct: 97   IASRKAISIILRREATKAIIEKK--KG--SKKLLPRTVLESLHERITALRWESALQVFEL 152

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWY+P+ GIY+KLIVMLGKCKQP KAHELFQAM++EGCV+NHE YTALLSAYSRS 
Sbjct: 153  LREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQAMINEGCVVNHEVYTALLSAYSRSG 212

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
            +FD+AF+LL+ MK+S +C+PDV+TYSILIKS LQVF FDKV+ LLSDM  QGI+PNT+TY
Sbjct: 213  RFDDAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITY 272

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGKA  F EMES L +ML    C+PD WTMNSTLRAFG +GQIEMME CYEKFQ
Sbjct: 273  NTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQ 332

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             +GIEPNIRTFNILLDSYGKSGNY KMS+VME+MQ+Y +SW+IVTYNV+IDAFGR  DLK
Sbjct: 333  SSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYQFSWTIVTYNVVIDAFGRAGDLK 392

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLMQ+ERIKP+CVT CSLVRAYGRAGKA+K+G VLR IEN+D+ LD VFFNCLV
Sbjct: 393  QMEYLFRLMQSERIKPSCVTLCSLVRAYGRAGKADKLGGVLRFIENSDIRLDLVFFNCLV 452

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGRME FAEM  V
Sbjct: 453  DAYGRMEKFAEMKGV 467



 Score =  140 bits (354), Expect = 1e-30
 Identities = 88/312 (28%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
 Frame = +2

Query: 422  HERITAL--------RWESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELF 577
            HE  TAL        R++ A  + E M+     +P    Y  LI    +     K  +L 
Sbjct: 198  HEVYTALLSAYSRSGRFDDAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 257

Query: 578  QAMVDEGCVINHETYTALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQ 757
              M  +G   N  TY  L+ AY ++  F E  S L  M    DC+PD +T +  +++   
Sbjct: 258  SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 317

Query: 758  VFEFDKVRMLLSDMESQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVW 937
              + + +       +S GI+PN  T+N L+D+YGK+G + +M S + E +        + 
Sbjct: 318  NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKM-SAVMEYMQKYQFSWTIV 376

Query: 938  TMNSTLRAFGNSGQIEMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFM 1117
            T N  + AFG +G ++ ME  +   Q   I+P+  T   L+ +YG++G  DK+  V+ F+
Sbjct: 377  TYNVVIDAFGRAGDLKQMEYLFRLMQSERIKPSCVTLCSLVRAYGRAGKADKLGGVLRFI 436

Query: 1118 QEYHYSWSIVTYNVLIDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKA 1297
            +       +V +N L+DA+GR+    +M+ +  LM+ +  KP+ VT+ ++V+AY  +G  
Sbjct: 437  ENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKVTYRTMVKAYRISGMT 496

Query: 1298 EKIGSVLRVIEN 1333
              +  +  V+++
Sbjct: 497  THVKELHGVVDS 508


>ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g48730, chloroplastic; Flags: Precursor
            gi|332008334|gb|AED95717.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 508

 Score =  586 bits (1510), Expect = e-165
 Identities = 290/375 (77%), Positives = 330/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAIS+ILRREATK++IE K  KG   K+LLPRTVLE+LHERITALRWESA++VFEL
Sbjct: 84   IASRKAISIILRREATKSIIEKK--KG--SKKLLPRTVLESLHERITALRWESAIQVFEL 139

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWY+P+ GIY+KLIVMLGKCKQP KAHELFQ M++EGCV+NHE YTAL+SAYSRS 
Sbjct: 140  LREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSG 199

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
            +FD AF+LL+ MK+S +C+PDV+TYSILIKS LQVF FDKV+ LLSDM  QGI+PNT+TY
Sbjct: 200  RFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITY 259

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGKA  F EMES L +ML    C+PD WTMNSTLRAFG +GQIEMME CYEKFQ
Sbjct: 260  NTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQ 319

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             +GIEPNIRTFNILLDSYGKSGNY KMS+VME+MQ+YHYSW+IVTYNV+IDAFGR  DLK
Sbjct: 320  SSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLK 379

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLMQ+ERI P+CVT CSLVRAYGRA KA+KIG VLR IEN+D+ LD VFFNCLV
Sbjct: 380  QMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLV 439

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGRME FAEM  V
Sbjct: 440  DAYGRMEKFAEMKGV 454


>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 636

 Score =  583 bits (1504), Expect = e-164
 Identities = 287/375 (76%), Positives = 329/375 (87%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAISVILRREATKA+IE K +   + K+LLPRTVLEALHERITALRWESALKVFEL
Sbjct: 86   IASRKAISVILRREATKAIIEKK-RGPTNSKKLLPRTVLEALHERITALRWESALKVFEL 144

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQ+WYRP  G+YIKLIVMLGKCKQP KAHELFQAM+ EGC ++HE+YTALLSAY RS 
Sbjct: 145  LREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSG 204

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
              D+AFSLL+ MK + DC+PDV+TYSILIKSC+QVF FDK + LLS+MES GI PNT+TY
Sbjct: 205  LLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITY 264

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGKA  F EME+ L +ML  Q+CEPDVWTMNSTLRAFG SGQIE MEKCYEKFQ
Sbjct: 265  NTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQ 324

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
            GAGIEP+I TFN+LLDSYGK+G+Y KMS+VME+MQ+YHYSW+I+TYN++IDAFGR  DLK
Sbjct: 325  GAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLK 384

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLM++ERIKP+CVT CSLVRAYG+A K EKI  VLR IEN+D+TLD+VFFNCLV
Sbjct: 385  QMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLV 444

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGRM  FAEM  V
Sbjct: 445  DAYGRMGCFAEMKGV 459


>gb|EXB96384.1| hypothetical protein L484_023104 [Morus notabilis]
          Length = 490

 Score =  581 bits (1497), Expect = e-163
 Identities = 284/374 (75%), Positives = 329/374 (87%)
 Frame = +2

Query: 299  ASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFELM 478
            AS+KAISVILRREATKA+IE K     S K+LLPRTVLEAL+ERI+ALRWESALKVFEL+
Sbjct: 61   ASRKAISVILRREATKALIETKRGPSNS-KKLLPRTVLEALYERISALRWESALKVFELL 119

Query: 479  REQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSCQ 658
            REQLWYRP+  +YIKLIVMLGKCKQP KA ELFQ MV+EGC +NHE+YTALLSAY RS +
Sbjct: 120  REQLWYRPNSSVYIKLIVMLGKCKQPEKAFELFQTMVEEGCPVNHESYTALLSAYGRSTR 179

Query: 659  FDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTYN 838
            F++AFSLL++MKN+ D +PDV+TY++LIKSCL   +FDKV  LLSDME+QGI+P+TVTYN
Sbjct: 180  FNQAFSLLEYMKNTPDLQPDVHTYTVLIKSCLHFSDFDKVEALLSDMEAQGIRPSTVTYN 239

Query: 839  TLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQG 1018
             LIDAYGKA +FAEME+ L EML  + CEPDVWTMNSTLRAFG SGQIE MEKCY+KFQ 
Sbjct: 240  VLIDAYGKARKFAEMEAVLVEMLQQEECEPDVWTMNSTLRAFGGSGQIETMEKCYDKFQR 299

Query: 1019 AGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLKQ 1198
            AGIEPNI+TFNILLDSYGK+G Y+KM +VME+MQ+YHYSW+IVTYNV+IDAFGR  DLKQ
Sbjct: 300  AGIEPNIKTFNILLDSYGKAGEYEKMGAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQ 359

Query: 1199 MEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLVD 1378
            MEYLFRLM++ERIKP+CVT CSLVRAY +AGK EKIG VLR IEN+DVTLD++FFNCLVD
Sbjct: 360  MEYLFRLMRSERIKPSCVTLCSLVRAYAQAGKPEKIGGVLRFIENSDVTLDTIFFNCLVD 419

Query: 1379 AYGRMEWFAEMNEV 1420
            AYGR+   AEM EV
Sbjct: 420  AYGRLGCLAEMKEV 433


>ref|XP_006443594.1| hypothetical protein CICLE_v10019744mg [Citrus clementina]
            gi|567902214|ref|XP_006443595.1| hypothetical protein
            CICLE_v10019744mg [Citrus clementina]
            gi|568851175|ref|XP_006479269.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568851177|ref|XP_006479270.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|557545856|gb|ESR56834.1| hypothetical protein
            CICLE_v10019744mg [Citrus clementina]
            gi|557545857|gb|ESR56835.1| hypothetical protein
            CICLE_v10019744mg [Citrus clementina]
          Length = 517

 Score =  579 bits (1492), Expect = e-162
 Identities = 284/375 (75%), Positives = 333/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAISVILRREATKAVIE K +  ++ K+LLPRTVLEAL+ERITALRWESALKVFEL
Sbjct: 91   IASKKAISVILRREATKAVIEKK-RGPVNSKKLLPRTVLEALNERITALRWESALKVFEL 149

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWY+P+  +Y+KLIVMLGKCKQP KAHELFQAMVDEGC  N +++TALLSAY RS 
Sbjct: 150  LREQLWYKPNAAVYVKLIVMLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSG 209

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
             FD+AFSLL+ MKN+ DC+PDV TYSILIKSCL+ F FDKV+ LLSDM +QGI+PNTVTY
Sbjct: 210  LFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTY 269

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYG+A  FAEME  L +ML ++ CEPDVWTMN TLRAFGNSGQI+ MEKCYEKFQ
Sbjct: 270  NTLIDAYGRAKMFAEMELTLVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQ 328

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGI+P+I TFNILLDSYGK+G+++KMS+VME+MQ+YHYSW+IVTYN++IDAFGR  DLK
Sbjct: 329  SAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 388

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLM++ERIKP+CVT CSLVRAYG AGK EK+GSVLR I+N+D+ LD+VFFNCLV
Sbjct: 389  QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 448

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGR++ FAEM  V
Sbjct: 449  DAYGRLKCFAEMKGV 463



 Score =  140 bits (353), Expect = 1e-30
 Identities = 90/300 (30%), Positives = 145/300 (48%)
 Frame = +2

Query: 446  WESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYT 625
            ++ A  + E M+     +P    Y  LI    K     K   L   M  +G   N  TY 
Sbjct: 211  FDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYN 270

Query: 626  ALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMES 805
             L+ AY R+  F E    L  M  S DC PDV+T +  +++     + D +       +S
Sbjct: 271  TLIDAYGRAKMFAEMELTLVKML-SEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQS 329

Query: 806  QGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIE 985
             GI+P+  T+N L+D+YGKAG F +M S + E +   H    + T N  + AFG +G ++
Sbjct: 330  AGIQPSINTFNILLDSYGKAGHFEKM-SAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLK 388

Query: 986  MMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLI 1165
             ME  +   +   I+P+  T   L+ +YG +G  +K+ SV+ F+         V +N L+
Sbjct: 389  QMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLV 448

Query: 1166 DAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVT 1345
            DA+GR++   +M+ +  +MQ    KP+ VT+ ++VRAY   G          ++E  D T
Sbjct: 449  DAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDET 508


>ref|XP_004299861.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 503

 Score =  578 bits (1489), Expect = e-162
 Identities = 284/375 (75%), Positives = 328/375 (87%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAISV+L REATK+ IE K  KG   KRLLPRTVLEALHERITALRWESALKVF+L
Sbjct: 77   IASRKAISVVLMREATKSHIEKK--KG--SKRLLPRTVLEALHERITALRWESALKVFQL 132

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            ++EQLWYRP+PG+YIKLIVMLGKCKQP KA ELFQAM+DEGC ++HE+YTAL+SAY RS 
Sbjct: 133  LQEQLWYRPNPGVYIKLIVMLGKCKQPEKAEELFQAMIDEGCGVSHESYTALISAYGRSS 192

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
             FD+AFSLL+ MK++ DC+PDV+TYSILIKSCL VF +D+V+ LLSDME+Q I+PNT+TY
Sbjct: 193  IFDKAFSLLEQMKDTPDCQPDVHTYSILIKSCLHVFAYDRVQALLSDMETQHIRPNTITY 252

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGK+ RFAEMES L  ML  + CEPDVWTMNS +RAFG+SGQIE MEKC+E+F 
Sbjct: 253  NTLIDAYGKSKRFAEMESTLVAMLSQRDCEPDVWTMNSVVRAFGSSGQIETMEKCFERFH 312

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGI+PNI TFNILLDSYGKSGNY KMS+VME+MQ+YHYSW+IVTYNV+IDAFGR  DL 
Sbjct: 313  SAGIQPNIMTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLT 372

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLMQ+ERIKP+CVT CSLVRAYG+AGK EKIG VL  +EN+DV LD+VFFNCLV
Sbjct: 373  QMEYLFRLMQSERIKPSCVTLCSLVRAYGKAGKPEKIGGVLCFVENSDVKLDAVFFNCLV 432

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGR+  F EM  V
Sbjct: 433  DAYGRLGCFTEMKGV 447



 Score =  132 bits (331), Expect = 5e-28
 Identities = 82/294 (27%), Positives = 145/294 (49%), Gaps = 8/294 (2%)
 Frame = +2

Query: 422  HERITALR--------WESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELF 577
            HE  TAL         ++ A  + E M++    +P    Y  LI          +   L 
Sbjct: 178  HESYTALISAYGRSSIFDKAFSLLEQMKDTPDCQPDVHTYSILIKSCLHVFAYDRVQALL 237

Query: 578  QAMVDEGCVINHETYTALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQ 757
              M  +    N  TY  L+ AY +S +F E  S L  M +  DC PDV+T + ++++   
Sbjct: 238  SDMETQHIRPNTITYNTLIDAYGKSKRFAEMESTLVAMLSQRDCEPDVWTMNSVVRAFGS 297

Query: 758  VFEFDKVRMLLSDMESQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVW 937
              + + +        S GI+PN +T+N L+D+YGK+G + +M S + E +   H    + 
Sbjct: 298  SGQIETMEKCFERFHSAGIQPNIMTFNILLDSYGKSGNYKKM-SAVMEYMQKYHYSWTIV 356

Query: 938  TMNSTLRAFGNSGQIEMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFM 1117
            T N  + AFG +G +  ME  +   Q   I+P+  T   L+ +YGK+G  +K+  V+ F+
Sbjct: 357  TYNVVIDAFGRAGDLTQMEYLFRLMQSERIKPSCVTLCSLVRAYGKAGKPEKIGGVLCFV 416

Query: 1118 QEYHYSWSIVTYNVLIDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAY 1279
            +        V +N L+DA+GR+    +M+ +  +M+ +   P+ +T+ ++++AY
Sbjct: 417  ENSDVKLDAVFFNCLVDAYGRLGCFTEMKGVLEMMEQKGCSPDKITYRTMIKAY 470



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 37/136 (27%), Positives = 71/136 (52%)
 Frame = +2

Query: 617  TYTALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSD 796
            TY  ++ A+ R+    +   L   M+ S   +P   T   L+++  +  + +K+  +L  
Sbjct: 357  TYNVVIDAFGRAGDLTQMEYLFRLMQ-SERIKPSCVTLCSLVRAYGKAGKPEKIGGVLCF 415

Query: 797  MESQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSG 976
            +E+  +K + V +N L+DAYG+ G F EM+  L EM+  + C PD  T  + ++A+  + 
Sbjct: 416  VENSDVKLDAVFFNCLVDAYGRLGCFTEMKGVL-EMMEQKGCSPDKITYRTMIKAYSFNK 474

Query: 977  QIEMMEKCYEKFQGAG 1024
                +++ +E  Q AG
Sbjct: 475  MTGHVKELHELLQSAG 490


>ref|XP_002303044.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222844770|gb|EEE82317.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 485

 Score =  577 bits (1488), Expect = e-162
 Identities = 288/375 (76%), Positives = 324/375 (86%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IASQKAISVILRREATKAVIE K +   + K+LLP+TVLEALHERITALRW SAL+VFEL
Sbjct: 71   IASQKAISVILRREATKAVIEKK-RGPTNSKKLLPQTVLEALHERITALRWASALEVFEL 129

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWYRP  G+Y+KLIVMLGKCKQP KAH+LFQAM+DEGC + HE+YTALLSAY RS 
Sbjct: 130  LREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSG 189

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
             FD+AFS+++ MKN+ DCRPDV+TYSILIKSCLQVF FDKV++LLSDMES GI+PNTVT 
Sbjct: 190  LFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVT- 248

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
                        FAEME+ L EML  Q CEPDVWTMNST+RAFG SGQ+EMME CYEKFQ
Sbjct: 249  ------------FAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQ 296

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGIEPNI+TFNILLDSYGK+GNY KMS+VME+MQ YHYSW+IVTYNV+IDAFGR  DLK
Sbjct: 297  SAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLK 356

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEYLFRLM++ERIKP+CVT CSLVRAY  AGK EKIGSVLR IEN+DVTLD+VFFNCLV
Sbjct: 357  QMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLV 416

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGR+E FAEM EV
Sbjct: 417  DAYGRLECFAEMKEV 431


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Glycine max]
          Length = 515

 Score =  575 bits (1483), Expect = e-161
 Identities = 282/380 (74%), Positives = 332/380 (87%), Gaps = 5/380 (1%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIEN----KMKKG-ISPKRLLPRTVLEALHERITALRWESAL 460
            +ASQKA+SVIL REATKA+I+     + KKG I+ K+LLPRTVLEALHER+TALRWESAL
Sbjct: 82   VASQKAVSVILWREATKAMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALRWESAL 141

Query: 461  KVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSA 640
            KVFEL+ EQ+WY+P  G+YIKLIVMLGKCKQP KAHELFQAMVDEGCV++ E+YTALLSA
Sbjct: 142  KVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSA 201

Query: 641  YSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKP 820
            YSRS   D+AFSLL+ MKN+  C+PDV TYSIL+KSCLQVF FDK++ LLSDM ++GIKP
Sbjct: 202  YSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKP 261

Query: 821  NTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKC 1000
            NTVTYNTLIDAYGKA +F+EMES L EML +++C+PDVWTMNSTLRAFGN GQIE MEKC
Sbjct: 262  NTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKC 321

Query: 1001 YEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGR 1180
            YEKFQ AGI+PN++TFNILLDSYGK+ +Y KMS+VME+MQ+YHYSW+IVT+N++IDAFG+
Sbjct: 322  YEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGK 381

Query: 1181 VRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVF 1360
              DLKQMEYLFRLM++ERIKP+CVT CSLVRAY RAGK EKI  VLR +EN+DV LD+VF
Sbjct: 382  AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVF 441

Query: 1361 FNCLVDAYGRMEWFAEMNEV 1420
            FNCLVDAY R+   AEM  V
Sbjct: 442  FNCLVDAYARLGCLAEMKGV 461


>ref|XP_004514268.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Cicer arietinum]
          Length = 520

 Score =  574 bits (1480), Expect = e-161
 Identities = 282/376 (75%), Positives = 328/376 (87%), Gaps = 1/376 (0%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKG-ISPKRLLPRTVLEALHERITALRWESALKVFE 472
            +ASQKA+SVILRREATKA+I+ + KKG I+ K+LLPRTVLEALHERI ALRWESALKVFE
Sbjct: 91   VASQKAVSVILRREATKAIIDKRRKKGPINSKKLLPRTVLEALHERIAALRWESALKVFE 150

Query: 473  LMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRS 652
            L+REQLWYRP  G+YIKLIVMLGKC+QP KA ELFQAMVDEGCV++ E+YTALLSAY RS
Sbjct: 151  LLREQLWYRPYSGVYIKLIVMLGKCRQPEKASELFQAMVDEGCVLDCESYTALLSAYGRS 210

Query: 653  CQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVT 832
               D AFSLL+ MK++  C+PDV TYSILIKSCLQVF FDKV+ LLSDM S GIKPNTVT
Sbjct: 211  GLLDRAFSLLEEMKSTPGCQPDVQTYSILIKSCLQVFAFDKVQSLLSDMASLGIKPNTVT 270

Query: 833  YNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKF 1012
            YNTLIDAYGKA RF+EMES L EML  Q C+PDVWTMNSTLRAFGN GQIE ME+CY+KF
Sbjct: 271  YNTLIDAYGKAKRFSEMESTLLEMLAEQECQPDVWTMNSTLRAFGNLGQIETMERCYDKF 330

Query: 1013 QGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDL 1192
            Q +GI+PN++TFNILLDSYGK+ ++ KMS+VME+MQ+YHYSW+IVTYN++IDAFG+  +L
Sbjct: 331  QTSGIQPNVQTFNILLDSYGKACDFTKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGNL 390

Query: 1193 KQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCL 1372
            KQMEYLFRLM++ERIKP+CVT CSLVRAY  AGK EKIG VLR ++N+DVTLD+VFFNCL
Sbjct: 391  KQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVDNSDVTLDTVFFNCL 450

Query: 1373 VDAYGRMEWFAEMNEV 1420
            VDAY R++   EM  V
Sbjct: 451  VDAYVRLDCLDEMKGV 466



 Score =  127 bits (319), Expect = 1e-26
 Identities = 76/281 (27%), Positives = 139/281 (49%)
 Frame = +2

Query: 449  ESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTA 628
            + A  + E M+     +P    Y  LI    +     K   L   M   G   N  TY  
Sbjct: 214  DRAFSLLEEMKSTPGCQPDVQTYSILIKSCLQVFAFDKVQSLLSDMASLGIKPNTVTYNT 273

Query: 629  LLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQ 808
            L+ AY ++ +F E  S L  M    +C+PDV+T +  +++   + + + +       ++ 
Sbjct: 274  LIDAYGKAKRFSEMESTLLEMLAEQECQPDVWTMNSTLRAFGNLGQIETMERCYDKFQTS 333

Query: 809  GIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEM 988
            GI+PN  T+N L+D+YGKA  F +M S + E +   H    + T N  + AFG +G ++ 
Sbjct: 334  GIQPNVQTFNILLDSYGKACDFTKM-SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGNLKQ 392

Query: 989  MEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLID 1168
            ME  +   +   I+P+  T   L+ +Y  +G  +K+  V+ F+     +   V +N L+D
Sbjct: 393  MEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVDNSDVTLDTVFFNCLVD 452

Query: 1169 AFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAG 1291
            A+ R+  L +M+ +  +M+ +  KP+ +T+ ++++AY   G
Sbjct: 453  AYVRLDCLDEMKGVLEIMEQKGCKPDFITYRTMIKAYSSKG 493


>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Cucumis sativus]
          Length = 511

 Score =  574 bits (1479), Expect = e-161
 Identities = 282/375 (75%), Positives = 331/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IASQKAISVILRREATKAVIE K     S K+LLPRTVLEALH+RIT LRWESALKVFEL
Sbjct: 86   IASQKAISVILRREATKAVIERKRGPNNS-KKLLPRTVLEALHDRITTLRWESALKVFEL 144

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWYRP  G+YIKLIVMLGKCKQ  KA+ELFQ M++EGC ++HE+YTALLSAYSRS 
Sbjct: 145  LREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSG 204

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
              DEAFS+L+ MKNS DC+PDV+TYSILIKSCLQVF F+K + LLSDM ++GIKPNT+TY
Sbjct: 205  LLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITY 264

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NT IDAYGKA  FAEMES L +ML +  C+PDVWTMNSTLRAFG SGQ+E MEKCYEKFQ
Sbjct: 265  NTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQ 324

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGI+P+I+TFNILLDSYGK+ +Y+KMS+VME+MQ+YHYSW+IVTYN++IDAFGR  +LK
Sbjct: 325  EAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLK 384

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QME+LFRLM++ERIKP+CVT CSLVRAYG+AGK EKI SVL ++EN+D+ LD+VF+NCLV
Sbjct: 385  QMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLV 444

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGR+E FAEM +V
Sbjct: 445  DAYGRLECFAEMKKV 459


>ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Cucumis sativus]
          Length = 456

 Score =  574 bits (1479), Expect = e-161
 Identities = 282/375 (75%), Positives = 331/375 (88%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IASQKAISVILRREATKAVIE K     S K+LLPRTVLEALH+RIT LRWESALKVFEL
Sbjct: 31   IASQKAISVILRREATKAVIERKRGPNNS-KKLLPRTVLEALHDRITTLRWESALKVFEL 89

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            +REQLWYRP  G+YIKLIVMLGKCKQ  KA+ELFQ M++EGC ++HE+YTALLSAYSRS 
Sbjct: 90   LREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSG 149

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
              DEAFS+L+ MKNS DC+PDV+TYSILIKSCLQVF F+K + LLSDM ++GIKPNT+TY
Sbjct: 150  LLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITY 209

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NT IDAYGKA  FAEMES L +ML +  C+PDVWTMNSTLRAFG SGQ+E MEKCYEKFQ
Sbjct: 210  NTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQ 269

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             AGI+P+I+TFNILLDSYGK+ +Y+KMS+VME+MQ+YHYSW+IVTYN++IDAFGR  +LK
Sbjct: 270  EAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLK 329

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QME+LFRLM++ERIKP+CVT CSLVRAYG+AGK EKI SVL ++EN+D+ LD+VF+NCLV
Sbjct: 330  QMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLV 389

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGR+E FAEM +V
Sbjct: 390  DAYGRLECFAEMKKV 404


>gb|EMJ01149.1| hypothetical protein PRUPE_ppb003056mg [Prunus persica]
          Length = 547

 Score =  573 bits (1476), Expect = e-161
 Identities = 293/409 (71%), Positives = 329/409 (80%), Gaps = 34/409 (8%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KAISVILRREATK +IE K  KG   KRLLPRTVLEA+HERITALRWESALKVFEL
Sbjct: 86   IASRKAISVILRREATKDLIEKK--KG--SKRLLPRTVLEAIHERITALRWESALKVFEL 141

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            + EQ WYRP+  +Y+KLIVMLGKCKQP KAHELFQAM+DEGC +NHE+YTAL+SAY RS 
Sbjct: 142  LHEQQWYRPNAALYVKLIVMLGKCKQPEKAHELFQAMIDEGCAVNHESYTALVSAYGRSG 201

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
             FD+AFSLL+ MKN+ DC+PDV+TYSILIKSCLQVF +DKV+ LLSDMESQGI+PNT+TY
Sbjct: 202  LFDKAFSLLEQMKNTPDCQPDVHTYSILIKSCLQVFAYDKVQALLSDMESQGIRPNTITY 261

Query: 836  NTLIDAYGKAG----------------------------------RFAEMESELAEMLCN 913
            NTLIDAYGK+                                   RFAEMES L EML  
Sbjct: 262  NTLIDAYGKSKKYSLISFPFNILNAPSISCEYHNKLFILNVFFPKRFAEMESTLVEMLGE 321

Query: 914  QHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDK 1093
            Q CEPDVWTMNS LRAFGNSGQIE MEKC+EKFQ AGI+ NI TFNILLDSYGK+GNY+K
Sbjct: 322  QDCEPDVWTMNSILRAFGNSGQIETMEKCFEKFQSAGIQANIMTFNILLDSYGKAGNYEK 381

Query: 1094 MSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVR 1273
            MS+VME+MQ+YHYSW+IVTYNV+IDAFGR  DLKQMEYLFRLM++ER+KP+CVT CSLVR
Sbjct: 382  MSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERMKPSCVTLCSLVR 441

Query: 1274 AYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLVDAYGRMEWFAEMNEV 1420
            AYG AG  EKI  VLR +EN+DV LD VFFNCLVDAYGRM  FAEM  V
Sbjct: 442  AYGLAGLPEKIDGVLRFVENSDVMLDIVFFNCLVDAYGRMGCFAEMKGV 490


>gb|ESW12606.1| hypothetical protein PHAVU_008G126700g [Phaseolus vulgaris]
          Length = 513

 Score =  568 bits (1463), Expect = e-159
 Identities = 282/378 (74%), Positives = 326/378 (86%), Gaps = 3/378 (0%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIEN--KMKKG-ISPKRLLPRTVLEALHERITALRWESALKV 466
            +ASQKA+SVIL REATKAVI+   + KKG I+ K+LLPRTVLEALHER+ ALRWESALKV
Sbjct: 82   LASQKAVSVILWREATKAVIDKSGRKKKGPINAKKLLPRTVLEALHERVAALRWESALKV 141

Query: 467  FELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYS 646
            FEL+REQ+WY P+ GIYIKLIVMLGKCKQP KAH LF AMVDEGCV++ E+YTALLSAYS
Sbjct: 142  FELLREQIWYSPNTGIYIKLIVMLGKCKQPEKAHGLFLAMVDEGCVLDCESYTALLSAYS 201

Query: 647  RSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNT 826
            RS   D+AF+LL+ MKN+  C+PDV TYSILIKSCLQVF FDKV+ LLSDM + GIKPNT
Sbjct: 202  RSGLLDKAFTLLEEMKNTPGCQPDVQTYSILIKSCLQVFAFDKVQGLLSDMANHGIKPNT 261

Query: 827  VTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYE 1006
            VTYNTLIDAYGKA +F+EMES L EML ++ C+PD WTMNSTLRAFGN GQIE MEKCYE
Sbjct: 262  VTYNTLIDAYGKARKFSEMESILVEMLADRDCQPDAWTMNSTLRAFGNIGQIETMEKCYE 321

Query: 1007 KFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVR 1186
            KFQ AGI+PN++TFNILLDSYGK+  Y KMS+VME+MQ YHYSW+IVT+N++IDAFG+  
Sbjct: 322  KFQTAGIQPNVQTFNILLDSYGKAEEYKKMSAVMEYMQRYHYSWTIVTFNIVIDAFGKAG 381

Query: 1187 DLKQMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFN 1366
            DLKQMEYLFRLM++ERIKP+CVT CSLVRAY  AGK EKIG V+R +EN+DV LD+VFFN
Sbjct: 382  DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVMRFVENSDVLLDTVFFN 441

Query: 1367 CLVDAYGRMEWFAEMNEV 1420
            CLVDAYGR+   AEM  V
Sbjct: 442  CLVDAYGRLGCLAEMKGV 459


>ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Brachypodium distachyon]
          Length = 502

 Score =  562 bits (1449), Expect = e-157
 Identities = 278/375 (74%), Positives = 325/375 (86%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KA+S+ILRR+ATKAV++ K + G   +RLLPRTVLEALHERI ALRWESALKVFEL
Sbjct: 82   IASRKALSIILRRDATKAVLD-KREPGKGTRRLLPRTVLEALHERIAALRWESALKVFEL 140

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            MR+Q+WYRP  GIYIKLI MLGKCKQP KAHELFQAMVDEGC  N E+YTAL+SAYSRS 
Sbjct: 141  MRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSG 200

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
             FD AFSLLD MK +  CRPDV TYSILIKSCL  ++FDKV+ LL+DM   GI+PNTVTY
Sbjct: 201  SFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTY 260

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTL+DAYGKAGRFAEMES L EML ++ C+PDVWTMNSTLRAFG+SGQIEMME CYEKFQ
Sbjct: 261  NTLVDAYGKAGRFAEMESTLLEML-SEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQ 319

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             +GI PNI+T+NILLDSYGK+  Y+KM +VME+MQ+Y+YSW+IVTYNV+IDAFGR  DL+
Sbjct: 320  ASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLE 379

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEY+FRLM+++RIKPNCVT CSL+RAYGRA + +KI +VLR+IEN+D TLD VFFNCLV
Sbjct: 380  QMEYIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTTLDIVFFNCLV 439

Query: 1376 DAYGRMEWFAEMNEV 1420
            DAYGR+   AEM +V
Sbjct: 440  DAYGRVGCLAEMWDV 454


>ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
            gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa
            Japonica Group] gi|113594979|dbj|BAF18853.1| Os06g0172000
            [Oryza sativa Japonica Group]
            gi|215697063|dbj|BAG91057.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218197679|gb|EEC80106.1|
            hypothetical protein OsI_21852 [Oryza sativa Indica
            Group] gi|222635046|gb|EEE65178.1| hypothetical protein
            OsJ_20289 [Oryza sativa Japonica Group]
          Length = 511

 Score =  559 bits (1441), Expect = e-157
 Identities = 274/375 (73%), Positives = 324/375 (86%)
 Frame = +2

Query: 296  IASQKAISVILRREATKAVIENKMKKGISPKRLLPRTVLEALHERITALRWESALKVFEL 475
            IAS+KA+SVILRREATKAV++ K K G   +RLLPRTVLEALHERITALRW+SALKVF+L
Sbjct: 91   IASRKALSVILRREATKAVLD-KRKPGKGTRRLLPRTVLEALHERITALRWDSALKVFDL 149

Query: 476  MREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETYTALLSAYSRSC 655
            MR+Q+WYRP  GIY+KLI MLGKCKQP +AHELFQAMVDEGC  N E+YTAL+SAYSRS 
Sbjct: 150  MRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSG 209

Query: 656  QFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDMESQGIKPNTVTY 835
            +FD AFSLL+ MK +  CRPDV TYSILIKSCL  ++F++V+ L+ DM   GI+PN VTY
Sbjct: 210  RFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTY 269

Query: 836  NTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQIEMMEKCYEKFQ 1015
            NTLIDAYGKAGRFAEMES L EML  ++C+PDVWTMNSTLRAFG SGQIE ME CYEKFQ
Sbjct: 270  NTLIDAYGKAGRFAEMESTLLEML-TENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQ 328

Query: 1016 GAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVLIDAFGRVRDLK 1195
             +GI PNI+T+NILLDSYGK+  Y+KM +VME+MQ+Y+YSW+IVTYNV+IDAFGR  DL+
Sbjct: 329  ASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLE 388

Query: 1196 QMEYLFRLMQTERIKPNCVTFCSLVRAYGRAGKAEKIGSVLRVIENTDVTLDSVFFNCLV 1375
            QMEY+FRLM++ERIKPNCVT CSLVRAYGRAG  +KI +VLR++EN+D+TLD VFFNCLV
Sbjct: 389  QMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLV 448

Query: 1376 DAYGRMEWFAEMNEV 1420
            DA+GR+   AEM +V
Sbjct: 449  DAFGRVGCLAEMWDV 463



 Score =  126 bits (317), Expect = 2e-26
 Identities = 80/277 (28%), Positives = 141/277 (50%)
 Frame = +2

Query: 443  RWESALKVFELMREQLWYRPSPGIYIKLIVMLGKCKQPHKAHELFQAMVDEGCVINHETY 622
            R++ A  + E M+     RP    Y  LI          +   L + M   G   N  TY
Sbjct: 210  RFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTY 269

Query: 623  TALLSAYSRSCQFDEAFSLLDFMKNSSDCRPDVYTYSILIKSCLQVFEFDKVRMLLSDME 802
              L+ AY ++ +F E  S L  M  + +C+PDV+T +  +++     + + +       +
Sbjct: 270  NTLIDAYGKAGRFAEMESTLLEML-TENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQ 328

Query: 803  SQGIKPNTVTYNTLIDAYGKAGRFAEMESELAEMLCNQHCEPDVWTMNSTLRAFGNSGQI 982
            + GI PN  TYN L+D+YGKA  + +M + + E +   +    + T N  + AFG +G +
Sbjct: 329  ASGISPNIKTYNILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDL 387

Query: 983  EMMEKCYEKFQGAGIEPNIRTFNILLDSYGKSGNYDKMSSVMEFMQEYHYSWSIVTYNVL 1162
            E ME  +   +   I+PN  T   L+ +YG++G+  K+ +V+  ++    +  IV +N L
Sbjct: 388  EQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCL 447

Query: 1163 IDAFGRVRDLKQMEYLFRLMQTERIKPNCVTFCSLVR 1273
            +DAFGRV  L +M  +  +M+ +R KP+ VT  ++++
Sbjct: 448  VDAFGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIK 484