BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00034533
         (1369 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   466   e-128
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   464   e-128
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   461   e-127
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   460   e-127
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   459   e-126
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   458   e-126
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   457   e-126
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   440   e-121
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   439   e-120
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      438   e-120
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   437   e-120
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   437   e-120
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   436   e-120
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g...   436   e-120
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]                       436   e-120
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab...   436   e-119
ref|XP_002331109.1| predicted protein [Populus trichocarpa]           436   e-119
ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like ...   434   e-119
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   432   e-118
ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Caps...   431   e-118

>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 350

 Score =  466 bits (1198), Expect = e-128
 Identities = 237/342 (69%), Positives = 280/342 (81%), Gaps = 21/342 (6%)
 Frame = -2

Query: 1245 LNQLTEAPQRPNKVPRI---------MKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQRTV 1093
            L   +++P+RP+K+ +          M  P+ G+QRYL+AIEYIGTRFSGSQQQ+N RTV
Sbjct: 9    LESRSQSPKRPSKISKTTSEEAEAESMSKPQ-GIQRYLIAIEYIGTRFSGSQQQSNCRTV 67

Query: 1092 VGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVR 913
            VGVL+EAF+KFIGQ V IFCSSRTDAGVHALSNVCHVD+ERISKRKPGEVL PHEP VV+
Sbjct: 68   VGVLEEAFRKFIGQPVSIFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPIVVQ 127

Query: 912  KAVNHFLQK-EGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWHVP 736
            +AVNHFLQK EGD+MVVDVR VP+DFHAR+KAQERTY+YRL+SGPE LSTFE+DRAWH+P
Sbjct: 128  RAVNHFLQKNEGDVMVVDVRSVPADFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHIP 187

Query: 735  EELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFG------- 577
            EEL+  AMQEACK+LVGHHDFSSFRAAGCQA SP RTLDEL+VSE  S P F        
Sbjct: 188  EELDVLAMQEACKILVGHHDFSSFRAAGCQAKSPIRTLDELNVSEVVSSPNFPTIAERTR 247

Query: 576  --ARDTLKCADDPN-DSGKEFSKSC-QEFGIRRGHRCLIVKARSRSFLYHQVRLLVGVLK 409
               +  ++C ++P  D    F+    Q FG+R+ HRC++V AR+R+FLYHQVRLLVGVLK
Sbjct: 248  NLVQKDIQCTNNPEADCHSSFNGGTDQGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLK 307

Query: 408  CVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYDL 283
            CVGTGDL + DVERIL+AKT+TAASPMAPACGLYLG+V+YDL
Sbjct: 308  CVGTGDLKIPDVERILNAKTVTAASPMAPACGLYLGHVRYDL 349


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  464 bits (1194), Expect = e-128
 Identities = 243/365 (66%), Positives = 278/365 (76%), Gaps = 37/365 (10%)
 Frame = -2

Query: 1266 SDENPVFLNQLTEAPQRPNKVPRI---------------MKPPRPGLQRYLVAIEYIGTR 1132
            SD     LN+ +E+PQRP+K+ R                     P +QRYLVA+EYIGTR
Sbjct: 15   SDSPKHLLNRRSESPQRPSKIARTDDLSDGEQQDSVASKTMTQNPRVQRYLVAVEYIGTR 74

Query: 1131 FSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKP 952
            FSGSQQQ N RTV G LQEAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 75   FSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKP 134

Query: 951  GEVLQPHEPSVVRKAVNHFLQK-EGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPES 775
            GEVL PHEP+VVR+AVNHFLQK EGD+MV+DVRCVP DFHARYKA+ERTY+YRL+SGPE 
Sbjct: 135  GEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYKARERTYFYRLLSGPEP 194

Query: 774  LSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESS 595
            LS+FE+DRAWHVPE+L+  AMQ+AC+VLVG HDFSSFRAAGCQA SP RTLDEL VSE  
Sbjct: 195  LSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGCQAKSPIRTLDELCVSEVL 254

Query: 594  SVPCFGA-----------RDTLKCA------DDPNDSGKE----FSKSCQEFGIRRGHRC 478
              P F +            + L C+      D P+ +  +    F+ + Q FG+RR HRC
Sbjct: 255  PTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLDGFNGAGQGFGVRRRHRC 314

Query: 477  LIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGN 298
             +V AR+RSFLYHQVRLLVGV+KCVGTGDLTV+DVERIL+AKT+TAASPMAPACGLYLGN
Sbjct: 315  FLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTAASPMAPACGLYLGN 374

Query: 297  VKYDL 283
            V YDL
Sbjct: 375  VNYDL 379


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  461 bits (1186), Expect = e-127
 Identities = 247/370 (66%), Positives = 271/370 (73%), Gaps = 44/370 (11%)
 Frame = -2

Query: 1260 ENPVFLNQLTEAPQRPNKVPRIMK------------------PPRPGLQRYLVAIEYIGT 1135
            ENP      T    RP+K+P+                        P +QRYLVAIEYIGT
Sbjct: 3    ENPKHSLSTTPESSRPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIEYIGT 62

Query: 1134 RFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRK 955
            RFSGSQQQ N RTVVGVL+EAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRK
Sbjct: 63   RFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRK 122

Query: 954  PGEVLQPHEPSVVRKAVNHFLQKEGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPES 775
            PGEVL PHEPSVVR+AVNHFLQ EGDI V+DVRCVP+DFHARYKAQERTY+YRL+SG E 
Sbjct: 123  PGEVLPPHEPSVVRRAVNHFLQSEGDITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEP 182

Query: 774  LSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESS 595
            LSTFE++RAWHVPE+L+  AMQEACKVLVGHHDFSSFRAAGCQA SP RTLDELHVSE+ 
Sbjct: 183  LSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAP 242

Query: 594  SVPCF-----------GARDTLKCADDPN-----DSGKEFSKSCQE----------FGIR 493
              P F              D+  C+ +P      DS   FS S  E          FGIR
Sbjct: 243  PTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDS---FSNSDDEVGSNGITDLGFGIR 299

Query: 492  RGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACG 313
            R H C +V AR+RSFLYHQVRLLVGVLKCVGTG+LT +DVERIL+AKT+TAASPMAPA G
Sbjct: 300  RRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPAYG 359

Query: 312  LYLGNVKYDL 283
            LYLG VKYDL
Sbjct: 360  LYLGCVKYDL 369


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  460 bits (1184), Expect = e-127
 Identities = 235/332 (70%), Positives = 268/332 (80%), Gaps = 4/332 (1%)
 Frame = -2

Query: 1266 SDENPVFLNQLTEAPQRPNKVPRIMKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQRTVVG 1087
            S + P+ + + T+     ++       P+PG+QRYLVA+EYIGTRF GSQQQ N RTVVG
Sbjct: 16   SSQRPLKIGKTTDELFHGDEEEAETMNPKPGIQRYLVAVEYIGTRFYGSQQQPNCRTVVG 75

Query: 1086 VLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRKA 907
             L+EAFQKFIGQ V +FCSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP VV KA
Sbjct: 76   ALEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKA 135

Query: 906  VNHFLQK-EGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWHVPEE 730
            VNHFLQK EGD+ VVDVR VP+DFHARYKAQERTY+YRLVSGPE+LS+FE+DRAWHVPE 
Sbjct: 136  VNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPET 195

Query: 729  LNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFGARDTLKCAD 550
            LN  AMQEACKVLVGHHDFSSFRAAGCQANSP RTLDEL+V E +S P F      K   
Sbjct: 196  LNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQ 255

Query: 549  DPNDSGKEF--SKSCQ-EFGIRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVA 379
               +S  E   S++C+  FGIRR HRC +V AR+RSFLYHQVRL+VGVLK VG+GDLTV 
Sbjct: 256  GKEESEIEVPCSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVG 315

Query: 378  DVERILDAKTITAASPMAPACGLYLGNVKYDL 283
            DV RIL+AK +++A PMAPACGLYLG+VKYDL
Sbjct: 316  DVGRILEAKNVSSARPMAPACGLYLGHVKYDL 347


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 389

 Score =  459 bits (1181), Expect = e-126
 Identities = 241/377 (63%), Positives = 277/377 (73%), Gaps = 44/377 (11%)
 Frame = -2

Query: 1266 SDENPVFLNQLTEAPQRPNKVPRIMKP--------------------PRPGLQRYLVAIE 1147
            S+ N   L+Q  E+PQRP+K+P++                       P P LQRYL+AIE
Sbjct: 11   SETNKHSLDQRPESPQRPSKLPKVNDDGGNDVVEGEEQKESVTRTMNPNPRLQRYLLAIE 70

Query: 1146 YIGTRFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERI 967
            YIGTRF+G+QQQ N RTVVGVLQEAFQKFIGQ V +FCSSRTDAGVHALSNVCHVDVERI
Sbjct: 71   YIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERI 130

Query: 966  SKRKPGEVLQPHEPSVVRKAVNHFLQKE-GDIMVVDVRCVPSDFHARYKAQERTYYYRLV 790
            SKRKPG+VL PHEP VV++AVNHFLQK  GDIMV+DVRCVP DFHARYKAQERTY+YRL+
Sbjct: 131  SKRKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMVIDVRCVPDDFHARYKAQERTYFYRLL 190

Query: 789  SGPESLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELH 610
            SGPE +S+FERDRAWHVPE L+  AMQ+AC +L+G HDFSSFRAA CQANSP RTLDEL+
Sbjct: 191  SGPEPVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAAACQANSPIRTLDELN 250

Query: 609  VSESSSVPCFGA------------RDTLKCADDPNDSGKEFS-----------KSCQEFG 499
            V E  S P F +              T+    D N S   F+           ++CQEFG
Sbjct: 251  VIEVVSTPFFPSISERLKSSSVMEDPTVYLGSDTNHSQISFNTNEGKLEGSNGEACQEFG 310

Query: 498  IRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPA 319
            +RR HRC +V AR+RSFLYHQVRLLVGVLK VG GDLT  DV+RIL+AK+I AA PMAPA
Sbjct: 311  LRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGDLTDPDVKRILEAKSIAAAPPMAPA 370

Query: 318  CGLYLGNVKYDLD*HNN 268
            CGLYLG+VKYDL   NN
Sbjct: 371  CGLYLGHVKYDLPPENN 387


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  458 bits (1179), Expect = e-126
 Identities = 248/371 (66%), Positives = 272/371 (73%), Gaps = 45/371 (12%)
 Frame = -2

Query: 1260 ENPVFLNQLTEAPQRPNKVPRIMK------------------PPRPGLQRYLVAIEYIGT 1135
            ENP      T    RP+K+P+                        P +QRYLVAIEYIGT
Sbjct: 3    ENPKHSLSTTPESSRPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIEYIGT 62

Query: 1134 RFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRK 955
            RFSGSQQQ N RTVVGVL+EAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRK
Sbjct: 63   RFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRK 122

Query: 954  PGEVLQPHEPSVVRKAVNHFLQK-EGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPE 778
            PGEVL PHEPSVVR+AVNHFLQK EGDI V+DVRCVP+DFHARYKAQERTY+YRL+SG E
Sbjct: 123  PGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPNDFHARYKAQERTYFYRLLSGSE 182

Query: 777  SLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSES 598
             LSTFE++RAWHVPE+L+  AMQEACKVLVGHHDFSSFRAAGCQA SP RTLDELHVSE+
Sbjct: 183  PLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEA 242

Query: 597  SSVPCF-----------GARDTLKCADDPN-----DSGKEFSKSCQE----------FGI 496
               P F              D+  C+ +P      DS   FS S  E          FGI
Sbjct: 243  PPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDS---FSNSDDEVGSNGITDLGFGI 299

Query: 495  RRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPAC 316
            RR H C +V AR+RSFLYHQVRLLVGVLKCVGTG+LT +DVERIL+AKT+TAASPMAPA 
Sbjct: 300  RRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPAY 359

Query: 315  GLYLGNVKYDL 283
            GLYLG VKYDL
Sbjct: 360  GLYLGCVKYDL 370


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
            tuberosum]
          Length = 389

 Score =  457 bits (1177), Expect = e-126
 Identities = 240/377 (63%), Positives = 277/377 (73%), Gaps = 44/377 (11%)
 Frame = -2

Query: 1266 SDENPVFLNQLTEAPQRPNKVPRIMKP--------------------PRPGLQRYLVAIE 1147
            S+ N   L+Q  E+PQRP+K P++                       P P LQRYL+AIE
Sbjct: 11   SETNKHSLDQRPESPQRPSKFPKVNDDAGNDVLEGEEQKESVTRTMNPNPRLQRYLIAIE 70

Query: 1146 YIGTRFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERI 967
            YIGTRF+G+QQQ N RTVVGVLQEAFQKF+GQ V +FCSSRTDAGVHALSNVCHVDVERI
Sbjct: 71   YIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPVSVFCSSRTDAGVHALSNVCHVDVERI 130

Query: 966  SKRKPGEVLQPHEPSVVRKAVNHFLQK-EGDIMVVDVRCVPSDFHARYKAQERTYYYRLV 790
            SKRKPG+VL PHEP VV++AVNHFLQK EGDIMV+DVRCVP+DFHARYKAQERTY+YRL+
Sbjct: 131  SKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVIDVRCVPADFHARYKAQERTYFYRLL 190

Query: 789  SGPESLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELH 610
            SGPES+S+FERDRAWHVPE L+  AMQ+AC +L+G HDFSSFRAA CQANSP RTLDEL+
Sbjct: 191  SGPESVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAAACQANSPIRTLDELN 250

Query: 609  VSESSSVPCFGA------------RDTLKCADDPNDSGKEFS-----------KSCQEFG 499
            V E  S P F +              T+    D N S    +           ++CQEFG
Sbjct: 251  VIEVVSTPFFPSISERLKSSSVMEDPTVSLGSDTNHSQISLNTNEEKLEGSNGEACQEFG 310

Query: 498  IRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPA 319
            +RR HRC +V AR+RSFLYHQVRLLVGVLK VG G LT  DV+RIL+AK+ITAA PMAPA
Sbjct: 311  LRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGVLTDPDVKRILEAKSITAAPPMAPA 370

Query: 318  CGLYLGNVKYDLD*HNN 268
            CGLYLG+VKYDL    N
Sbjct: 371  CGLYLGHVKYDLPPETN 387


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
            gi|550312358|gb|ERP48449.1| hypothetical protein
            POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  440 bits (1132), Expect = e-121
 Identities = 230/344 (66%), Positives = 260/344 (75%), Gaps = 24/344 (6%)
 Frame = -2

Query: 1245 LNQLTEAPQRPNKVPRIMKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQRTVVGVLQEAFQ 1066
            L +  ++ +   +   + K  +PGLQRYLVA+EYIGTRF GSQQQ N RTVVGVLQEAF 
Sbjct: 25   LQEEGDSSEEEEEKEAVDKSMKPGLQRYLVAVEYIGTRFCGSQQQLNHRTVVGVLQEAFH 84

Query: 1065 KFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRKAVNHFLQ- 889
            KFIGQ V I  SSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP+VVRKAVNHFLQ 
Sbjct: 85   KFIGQPVTICLSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQK 144

Query: 888  KEGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWHVPEELNHQAMQ 709
            KEGDIMV DVR VP+ FHAR+KAQERTY+YRL+ GPE LSTFE+DRAWHV EEL+  +MQ
Sbjct: 145  KEGDIMVTDVRSVPAHFHARFKAQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQ 204

Query: 708  EACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFGARDTLKCADDPNDSGK 529
            EACKVLVGHHDFSSFRA+GCQA SPFRTL+EL V E  S P F +    +      +   
Sbjct: 205  EACKVLVGHHDFSSFRASGCQAKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPH 264

Query: 528  EFSKSCQE-----------------------FGIRRGHRCLIVKARSRSFLYHQVRLLVG 418
             F   C+                        FGIRR HRC ++ ARSRSFLYHQVRLLVG
Sbjct: 265  SFHNKCKTGLPTGSISNGFMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVG 324

Query: 417  VLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYD 286
            VLK VGTGDLTV+DVERIL+A++ITAASPMAPACGLYLG+VKY+
Sbjct: 325  VLKSVGTGDLTVSDVERILNARSITAASPMAPACGLYLGHVKYE 368


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
            arietinum]
          Length = 374

 Score =  439 bits (1129), Expect = e-120
 Identities = 227/319 (71%), Positives = 251/319 (78%), Gaps = 22/319 (6%)
 Frame = -2

Query: 1173 LQRYLVAIEYIGTRFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSN 994
            +QRYLVAIEYIGT FSGSQ+Q   RTVVGVL+EAF KF+GQ V + CSSRTDAGVHALSN
Sbjct: 54   IQRYLVAIEYIGTHFSGSQKQLTDRTVVGVLEEAFCKFVGQPVSVICSSRTDAGVHALSN 113

Query: 993  VCHVDVERISKRKPGEVLQPHEPSVVRKAVNHFLQKE-GDIMVVDVRCVPSDFHARYKAQ 817
            VCHVD+ERISKRKPGEVL PHEP VVR+AVNHFLQK+ GD+MV+DVRCVPSDFHARYKAQ
Sbjct: 114  VCHVDIERISKRKPGEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPSDFHARYKAQ 173

Query: 816  ERTYYYRLVSGPESLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANS 637
            ERTY+YRL+SG E LST E+DRAWHVPEELN  AMQEAC+VLVGHHDFSSFRAAGCQA S
Sbjct: 174  ERTYFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVGHHDFSSFRAAGCQAKS 233

Query: 636  PFRTLDELHVSESSSVPCFGA----RDTLKCADDPNDSGK-----------------EFS 520
            P RTLDEL V E    P F +       +K ADD +  G                    S
Sbjct: 234  PIRTLDELSVVEVIQSPYFPSVMDRERQIKVADDLHGCGSNAEAVIPVSSSARIDKVRAS 293

Query: 519  KSCQEFGIRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDAKTITA 340
                 FG RR HRCL+V AR+R+FLYHQVRLLVGVLK VGTG+LT+ DVERIL+AKT+TA
Sbjct: 294  NEGVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKTVTA 353

Query: 339  ASPMAPACGLYLGNVKYDL 283
            ASPMAPACGLYLG VKYDL
Sbjct: 354  ASPMAPACGLYLGEVKYDL 372


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  438 bits (1127), Expect = e-120
 Identities = 228/353 (64%), Positives = 269/353 (76%), Gaps = 27/353 (7%)
 Frame = -2

Query: 1260 ENPVFLNQLTEAPQRPNKVPRIMKPPRPG-----LQRYLVAIEYIGTRFSGSQQQTNQRT 1096
            ++ V   + ++   RP+K+ +I +          +QRYLVA+EYIGTRF G Q+Q   RT
Sbjct: 7    KHTVEFEECSDNNNRPSKISKIEEEMNQHHHHRKIQRYLVAVEYIGTRFFGFQKQLTDRT 66

Query: 1095 VVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVV 916
            V GVL++AF KF+GQ V + CSSRTDAGVHALSNVCHVD+ERISKRKPGEVLQPHEP+VV
Sbjct: 67   VAGVLEDAFCKFVGQPVSVVCSSRTDAGVHALSNVCHVDIERISKRKPGEVLQPHEPAVV 126

Query: 915  RKAVNHFLQKE-GDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWHV 739
            R+AVNHFLQKE GD+ V+DVRCVPSDFHARYKAQERTY+YRL+SGPE+LSTFE+DRAWH+
Sbjct: 127  RRAVNHFLQKENGDLAVIDVRCVPSDFHARYKAQERTYFYRLLSGPETLSTFEKDRAWHI 186

Query: 738  PEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCF------- 580
            PEELN  AMQEACKVLVGHHDFSSFRA+GCQA SP R+LDEL V E +  P F       
Sbjct: 187  PEELNLPAMQEACKVLVGHHDFSSFRASGCQAKSPIRSLDELSVVEVTRSPYFPSVMDRE 246

Query: 579  ---GARDTLKCADDPNDSG---------KEFSKSCQE--FGIRRGHRCLIVKARSRSFLY 442
                  D L C    +++           E S S ++  FG RR HRCL+V AR+R+FLY
Sbjct: 247  NPINVTDDLHCFHSNSETVIPLGSSARIDEVSASKEDVGFGKRRYHRCLVVTARARAFLY 306

Query: 441  HQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYDL 283
            HQVRLLVGVLK VGTG++TV DVERIL+AKT+TA SPMAPACGLYLG VKYDL
Sbjct: 307  HQVRLLVGVLKDVGTGNITVTDVERILNAKTVTATSPMAPACGLYLGEVKYDL 359


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  437 bits (1124), Expect = e-120
 Identities = 230/349 (65%), Positives = 265/349 (75%), Gaps = 37/349 (10%)
 Frame = -2

Query: 1218 RPNKVPRIMKP---------------PRPGLQRYLVAIEYIGTRFSGSQQQTNQRTVVGV 1084
            RP+K+ +I  P               PR G+QRYLVAIEYIGT FSGSQ+Q N RTVVG 
Sbjct: 18   RPSKISKIEYPSDSDIDEEEEGMSQNPRNGIQRYLVAIEYIGTLFSGSQKQLNVRTVVGA 77

Query: 1083 LQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRKAV 904
            L+EAF KF+GQ V + CSSRTDAGVHALSNVCHVD++RISKR+PGEVL PHEP+VV +AV
Sbjct: 78   LEEAFSKFVGQPVSVSCSSRTDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAV 137

Query: 903  NHFLQK-EGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWHVPEEL 727
            NHFLQK + D+MV+DVRCVPSDFHAR+KAQERTY+YRL+SGPE LSTFE+DRAWHVPEEL
Sbjct: 138  NHFLQKHDSDLMVIDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEEL 197

Query: 726  NHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFG---------- 577
            +  AMQEAC+VLVG HDFSSFRAAGCQA SP RTLDEL V+E    P F           
Sbjct: 198  SLPAMQEACRVLVGCHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNK 257

Query: 576  -ARDTLKCADD--------PNDSGKEFSKSCQE--FGIRRGHRCLIVKARSRSFLYHQVR 430
             + D   C+++         N S  +   S Q+  FG RR HRCL+V AR+RSFLYHQVR
Sbjct: 258  VSGDLRSCSNNTETDIPPISNPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVR 317

Query: 429  LLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYDL 283
            LLVGVLK  GTG+LT+ DVERIL+AKT+TAASPMAPACGLYLG VKYDL
Sbjct: 318  LLVGVLKAAGTGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYDL 366


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  437 bits (1123), Expect = e-120
 Identities = 227/327 (69%), Positives = 259/327 (79%), Gaps = 22/327 (6%)
 Frame = -2

Query: 1197 IMKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTD 1018
            ++K PR G+QRYLVAIEYIGTRFSGSQ+Q N RTVVGVL+EAF KF+GQ V + CSSRT 
Sbjct: 41   MIKNPRNGIQRYLVAIEYIGTRFSGSQKQLNVRTVVGVLEEAFSKFVGQPVSVSCSSRTV 100

Query: 1017 AGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRKAVNHFLQK-EGDIMVVDVRCVPSD 841
            AGVHALSNVCHVD++RISKR+PGEVL PHEP+VV +AVNHFLQK + D+MV+DVRCVPSD
Sbjct: 101  AGVHALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVRCVPSD 160

Query: 840  FHARYKAQERTYYYRLVSGPESLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFR 661
            FHAR+KAQER Y+YRL+SGPE LSTFE+DRAWHVPEEL+  AMQEAC+VLVG HDFSSFR
Sbjct: 161  FHARFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSSFR 220

Query: 660  AAGCQANSPFRTLDELHVSESSSVPCFG-----------ARDTLKC-----ADDPNDSGK 529
            AAGCQA SP RTLDEL V+E    P F            + D   C      D P  S  
Sbjct: 221  AAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTSNP 280

Query: 528  EFSK---SCQE--FGIRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERI 364
               K   S Q+  FG RR HRCL+V AR+R+FLYHQVRLLVGVLK VGTG+LT+ DVERI
Sbjct: 281  SIDKVMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERI 340

Query: 363  LDAKTITAASPMAPACGLYLGNVKYDL 283
            L+A+T+TAASPMAPACGLYLG VKYDL
Sbjct: 341  LNARTVTAASPMAPACGLYLGEVKYDL 367


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332190374|gb|AEE28495.1| pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 372

 Score =  436 bits (1122), Expect = e-120
 Identities = 227/352 (64%), Positives = 260/352 (73%), Gaps = 21/352 (5%)
 Frame = -2

Query: 1278 VESYSDENPVFLNQLTEAPQRPNKVPRIMKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQR 1099
            +E +SDE       L +           M P  P +QRYLVAIEYIGTRFSGSQQQ   R
Sbjct: 27   IEGFSDEESEEQQGLADLES--------MNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDR 78

Query: 1098 TVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSV 919
            TVVGVLQEAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP V
Sbjct: 79   TVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGV 138

Query: 918  VRKAVNHFLQ-KEGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWH 742
            V++AVNHFLQ K+GD+MV+DVRCVPS++HARYKAQERTY+YRL+SG + LS  E+DR WH
Sbjct: 139  VQRAVNHFLQRKDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWH 198

Query: 741  VPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFGA---- 574
            VPEELN + MQEAC+VLVG HDFSSFRAAGCQA SP R+LDEL+++E  S P F +    
Sbjct: 199  VPEELNLRFMQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITER 258

Query: 573  -------RDTLKCADDP---------NDSGKEFSKSCQEFGIRRGHRCLIVKARSRSFLY 442
                    D L C++ P         N    E S     FG RR HRC +V ARSR FLY
Sbjct: 259  TLSNLNNGDPLACSNQPKSETAGVTTNVGEVEGSTEGDSFGRRRRHRCYVVTARSRGFLY 318

Query: 441  HQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYD 286
            HQVRL+VG LKCVGTG+LTV+DVERIL+AKT++AA PMAPA GLYL  V+Y+
Sbjct: 319  HQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLARVRYE 370


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
            gi|51971573|dbj|BAD44451.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 368

 Score =  436 bits (1122), Expect = e-120
 Identities = 227/352 (64%), Positives = 260/352 (73%), Gaps = 21/352 (5%)
 Frame = -2

Query: 1278 VESYSDENPVFLNQLTEAPQRPNKVPRIMKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQR 1099
            +E +SDE       L +           M P  P +QRYLVAIEYIGTRFSGSQQQ   R
Sbjct: 23   IEGFSDEESEEQQGLADLES--------MNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDR 74

Query: 1098 TVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSV 919
            TVVGVLQEAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP V
Sbjct: 75   TVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGV 134

Query: 918  VRKAVNHFLQ-KEGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWH 742
            V++AVNHFLQ K+GD+MV+DVRCVPS++HARYKAQERTY+YRL+SG + LS  E+DR WH
Sbjct: 135  VQRAVNHFLQRKDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWH 194

Query: 741  VPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFGA---- 574
            VPEELN + MQEAC+VLVG HDFSSFRAAGCQA SP R+LDEL+++E  S P F +    
Sbjct: 195  VPEELNLRFMQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITER 254

Query: 573  -------RDTLKCADDP---------NDSGKEFSKSCQEFGIRRGHRCLIVKARSRSFLY 442
                    D L C++ P         N    E S     FG RR HRC +V ARSR FLY
Sbjct: 255  TLSNLNNGDPLACSNQPKSETAGVTTNVGEVEGSTGGDSFGRRRRHRCYVVTARSRGFLY 314

Query: 441  HQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYD 286
            HQVRL+VG LKCVGTG+LTV+DVERIL+AKT++AA PMAPA GLYL  V+Y+
Sbjct: 315  HQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLARVRYE 366


>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
          Length = 372

 Score =  436 bits (1122), Expect = e-120
 Identities = 227/352 (64%), Positives = 260/352 (73%), Gaps = 21/352 (5%)
 Frame = -2

Query: 1278 VESYSDENPVFLNQLTEAPQRPNKVPRIMKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQR 1099
            +E +SDE       L +           M P  P +QRYLVAIEYIGTRFSGSQQQ   R
Sbjct: 27   IEGFSDEESEEQQGLADLES--------MNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDR 78

Query: 1098 TVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSV 919
            TVVGVLQEAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP V
Sbjct: 79   TVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGV 138

Query: 918  VRKAVNHFLQ-KEGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWH 742
            V++AVNHFLQ K+GD+MV+DVRCVPS++HARYKAQERTY+YRL+SG + LS  E+DR WH
Sbjct: 139  VQRAVNHFLQRKDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWH 198

Query: 741  VPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFGA---- 574
            VPEELN + MQEAC+VLVG HDFSSFRAAGCQA SP R+LDEL+++E  S P F +    
Sbjct: 199  VPEELNLRFMQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITER 258

Query: 573  -------RDTLKCADDP---------NDSGKEFSKSCQEFGIRRGHRCLIVKARSRSFLY 442
                    D L C++ P         N    E S     FG RR HRC +V ARSR FLY
Sbjct: 259  TLSNLNNGDPLACSNQPKSETAGVTTNVGEVEGSTGGDSFGRRRRHRCYVVTARSRGFLY 318

Query: 441  HQVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYD 286
            HQVRL+VG LKCVGTG+LTV+DVERIL+AKT++AA PMAPA GLYL  V+Y+
Sbjct: 319  HQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLARVRYE 370


>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
            lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
            ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  436 bits (1121), Expect = e-119
 Identities = 221/324 (68%), Positives = 252/324 (77%), Gaps = 21/324 (6%)
 Frame = -2

Query: 1194 MKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDA 1015
            M P  P +QRYLVAIEYIGTRFSGSQQQ   RTVVGVLQ+AF KFIGQ V IFCSSRTDA
Sbjct: 48   MNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQDAFHKFIGQPVKIFCSSRTDA 107

Query: 1014 GVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRKAVNHFLQ-KEGDIMVVDVRCVPSDF 838
            GVHALSNVCHVDVERISKRKPGEVL PHEP VV++AVNHFLQ K+GD+MV+DVRCVPS++
Sbjct: 108  GVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPSNY 167

Query: 837  HARYKAQERTYYYRLVSGPESLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRA 658
            HARYKAQERTY+YRL++G + LS  E+DR WHVPEELN ++MQEAC+VLVG+HDFSSFRA
Sbjct: 168  HARYKAQERTYFYRLLAGSDPLSILEKDRCWHVPEELNPRSMQEACRVLVGYHDFSSFRA 227

Query: 657  AGCQANSPFRTLDELHVSESSSVPCFGA-----------RDTLKCADDP---------ND 538
            AGCQA SP R LDEL+++E  S P F +            D L C+  P         N 
Sbjct: 228  AGCQAKSPMRYLDELNITEVPSTPYFPSITERAWSNLNNGDPLACSSQPKSETAGVTTNV 287

Query: 537  SGKEFSKSCQEFGIRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILD 358
               E S     FG RR HRC +V ARSR FLYHQVRL+VG LKCVGTG+LTV+DVERIL+
Sbjct: 288  GEVEGSTDGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILE 347

Query: 357  AKTITAASPMAPACGLYLGNVKYD 286
            AKT++AA PMAPA GLYL  VKY+
Sbjct: 348  AKTVSAAKPMAPASGLYLARVKYE 371


>ref|XP_002331109.1| predicted protein [Populus trichocarpa]
          Length = 326

 Score =  436 bits (1121), Expect = e-119
 Identities = 227/323 (70%), Positives = 251/323 (77%), Gaps = 24/323 (7%)
 Frame = -2

Query: 1182 RPGLQRYLVAIEYIGTRFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHA 1003
            +PGLQRYLVA+EYIGTRF GSQQQ N RTVVGVLQEAF KFIGQ V I  SSRTDAGVHA
Sbjct: 2    KPGLQRYLVAVEYIGTRFCGSQQQLNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHA 61

Query: 1002 LSNVCHVDVERISKRKPGEVLQPHEPSVVRKAVNHFLQ-KEGDIMVVDVRCVPSDFHARY 826
            LSNVCHVDVERISKRKPGEVL PHEP+VVRKAVNHFLQ KEGDIMV DVR V + FHAR+
Sbjct: 62   LSNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVSAHFHARF 121

Query: 825  KAQERTYYYRLVSGPESLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQ 646
            KAQERTY+YRL+ GPE LSTFE+DRAWHV EEL+  +MQEACKVLVGHHDFSSFRA+GCQ
Sbjct: 122  KAQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQ 181

Query: 645  ANSPFRTLDELHVSESSSVPCFGARDTLKCADDPNDSGKEFSKSCQE------------- 505
            A SPFRTL+EL V E  S P F +    +      +    F   C+              
Sbjct: 182  AKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLPTGSISNGFMA 241

Query: 504  ----------FGIRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDA 355
                      FGIRR HRC ++ ARSRSFLYHQVRLLVGVLK VGTGDLTV+DVERIL+A
Sbjct: 242  GGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNA 301

Query: 354  KTITAASPMAPACGLYLGNVKYD 286
            ++ITAASPMAPACGLYLG+VKY+
Sbjct: 302  RSITAASPMAPACGLYLGHVKYE 324


>ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Setaria italica]
          Length = 385

 Score =  434 bits (1115), Expect = e-119
 Identities = 222/324 (68%), Positives = 257/324 (79%), Gaps = 24/324 (7%)
 Frame = -2

Query: 1179 PGLQRYLVAIEYIGTRFSGSQQQTNQRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHAL 1000
            P  QRYLVA+EY+GTRFSGSQQQ NQRTVVGVL+EAF KFIGQ V IFCSSRTDAGVHAL
Sbjct: 61   PRAQRYLVAVEYVGTRFSGSQQQPNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDAGVHAL 120

Query: 999  SNVCHVDVERISKRKPGEVLQPHEPSVVRKAVNHFLQK-EGDIMVVDVRCVPSDFHARYK 823
            SN+CHVDVERISKRKPGEVL PHEP VV++AVNHFLQ+ EGDIMV DVRCV  DFHARYK
Sbjct: 121  SNICHVDVERISKRKPGEVLTPHEPGVVKRAVNHFLQRNEGDIMVTDVRCVAPDFHARYK 180

Query: 822  AQERTYYYRLVSGPESLSTFERDRAWHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQA 643
            A ERTY+YRL+SGPES S FE++ AWH+ E+L+ QAM++AC +LVGHHDFSSFRAAGCQA
Sbjct: 181  ALERTYHYRLLSGPESTSVFEKNSAWHISEDLDIQAMKKACSILVGHHDFSSFRAAGCQA 240

Query: 642  NSPFRTLDELHVSESSSVPCFGA---RDTLKCAD-----------DPN---------DSG 532
            NSP RTLDEL+V+E      F +   R  ++ +D           +P+          SG
Sbjct: 241  NSPMRTLDELNVTEVFPFMFFPSSIERSEMESSDGSLIYSRTPALEPSRKESDDSCTSSG 300

Query: 531  KEFSKSCQEFGIRRGHRCLIVKARSRSFLYHQVRLLVGVLKCVGTGDLTVADVERILDAK 352
            K  S++ +EFG R  HRC +V AR+RSFLYHQVRL+VG+LK VGTGDLT ADVERIL+AK
Sbjct: 301  KSESENGKEFGSRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERILNAK 360

Query: 351  TITAASPMAPACGLYLGNVKYDLD 280
             +TAA PMAPACGLYL NVKYDL+
Sbjct: 361  KVTAAPPMAPACGLYLANVKYDLN 384


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
            gi|557095305|gb|ESQ35887.1| hypothetical protein
            EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  432 bits (1112), Expect = e-118
 Identities = 226/346 (65%), Positives = 264/346 (76%), Gaps = 16/346 (4%)
 Frame = -2

Query: 1275 ESYSDENPVFLNQLTEAPQRPNKV---PRIMKPPRPGLQRYLVAIEYIGTRFSGSQQQTN 1105
            + +SDE      +  EA +R   V   P +   PR  +QRYLVAIEYIGTRFSGSQQQ  
Sbjct: 28   DGFSDEE-----EGEEAEERQGLVVSEPELSMNPR--VQRYLVAIEYIGTRFSGSQQQAT 80

Query: 1104 QRTVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEP 925
             RTVVGVLQEAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP
Sbjct: 81   DRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEP 140

Query: 924  SVVRKAVNHFLQK-EGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRA 748
             VV++AVNHFLQ+ +GD+MV+DVRCVPS++HARYKA+ERTY+YRL+SG + LS  E+DRA
Sbjct: 141  GVVQRAVNHFLQRNDGDVMVIDVRCVPSNYHARYKARERTYFYRLLSGSDPLSILEKDRA 200

Query: 747  WHVPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFGA-- 574
            WHVPEEL+ ++MQEAC+VLVG HDFSSFRAAGCQA SP R+LDEL+V+E  S P F +  
Sbjct: 201  WHVPEELDLRSMQEACRVLVGTHDFSSFRAAGCQAKSPIRSLDELNVTEVPSTPYFPSIT 260

Query: 573  ---------RDTLKCADD-PNDSGKEFSKSCQEFGIRRGHRCLIVKARSRSFLYHQVRLL 424
                      D L C+     ++    +     FG+RR HRC +V AR R+FLYHQVRLL
Sbjct: 261  ERTPSYLNNGDPLACSSQAKTETAGVSTDGGDTFGVRRRHRCYVVTARGRAFLYHQVRLL 320

Query: 423  VGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYD 286
            V  LKCVGTG+LTV+DVERIL AKT+TAA PMAPACGLYL  VKY+
Sbjct: 321  VAALKCVGTGELTVSDVERILKAKTVTAAKPMAPACGLYLARVKYE 366


>ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Capsella rubella]
            gi|482573835|gb|EOA38022.1| hypothetical protein
            CARUB_v10009493mg [Capsella rubella]
          Length = 370

 Score =  431 bits (1108), Expect = e-118
 Identities = 228/351 (64%), Positives = 257/351 (73%), Gaps = 20/351 (5%)
 Frame = -2

Query: 1278 VESYSDENPVFLNQLTEAPQRPNKVPRIMKPPRPGLQRYLVAIEYIGTRFSGSQQQTNQR 1099
            +E +SDE    +   +E           M P  P LQRYLVAIEYIGTRFSGSQQQ   R
Sbjct: 27   IEGFSDEEEGLVYSESELS---------MNPGNPRLQRYLVAIEYIGTRFSGSQQQATDR 77

Query: 1098 TVVGVLQEAFQKFIGQSVPIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLQPHEPSV 919
            TVVGVLQEAF KFIGQ V IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP V
Sbjct: 78   TVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGV 137

Query: 918  VRKAVNHFLQ-KEGDIMVVDVRCVPSDFHARYKAQERTYYYRLVSGPESLSTFERDRAWH 742
            V+KAVNHFLQ K+GD+MV+DVRCVPS++HARYKA+ERTY+YR++SG + LS  E+DR WH
Sbjct: 138  VQKAVNHFLQRKDGDVMVIDVRCVPSNYHARYKARERTYFYRILSGSDPLSILEKDRCWH 197

Query: 741  VPEELNHQAMQEACKVLVGHHDFSSFRAAGCQANSPFRTLDELHVSESSSVPCFGA---- 574
            VPEELN ++MQEACKVLVG HDFSSFRAAGCQA S  R+LDEL V+E  S P F +    
Sbjct: 198  VPEELNLRSMQEACKVLVGTHDFSSFRAAGCQAKSAMRSLDELSVTEVPSTPYFPSITER 257

Query: 573  ------RDTLKCADD---------PNDSGKEFSKSCQEFGIRRGHRCLIVKARSRSFLYH 439
                   D   C+            N    E S     FG RR HRC +V ARSR FLYH
Sbjct: 258  ASNLNNGDPFACSSQHKTETAGVGTNVGEVEGSTDGDSFGARRRHRCYVVTARSRGFLYH 317

Query: 438  QVRLLVGVLKCVGTGDLTVADVERILDAKTITAASPMAPACGLYLGNVKYD 286
            QVRLLVGVLK VGTG+LTVADVERIL+AKT++A+ PMAPA GLYL  VKY+
Sbjct: 318  QVRLLVGVLKSVGTGELTVADVERILEAKTVSASKPMAPASGLYLARVKYE 368