BLASTX nr result
ID: Achyranthes22_contig00034196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00034196
(288 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 168 8e-40
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 166 3e-39
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 166 3e-39
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 166 3e-39
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 164 1e-38
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 164 1e-38
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 163 2e-38
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 162 4e-38
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 158 6e-37
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 144 9e-33
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a... 135 7e-30
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 116 3e-24
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 106 3e-21
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 106 3e-21
gb|AFM77886.1| replicase [Hosta virus X] 102 7e-20
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 100 2e-19
ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X] g... 91 2e-16
ref|YP_054407.1| replication-associated protein [Opuntia virus X... 90 3e-16
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082... 89 5e-16
gb|ACS28233.1| replicase [Alternanthera mosaic virus] 89 6e-16
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 168 bits (425), Expect = 8e-40
Identities = 81/94 (86%), Positives = 87/94 (92%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
K++ TLR LNRFPTPW PDRARARAFTSDVKNSRTGKALHRE+QTWKETQTMLT+N +
Sbjct: 581 KIIATLRNLNRFPTPWSPDRARARAFTSDVKNSRTGKALHRESQTWKETQTMLTDNAEIH 640
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
AISVIHGAGGSGKSQALQTLLRQNP+LPIEVVL
Sbjct: 641 TAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVL 674
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 166 bits (420), Expect = 3e-39
Identities = 81/94 (86%), Positives = 87/94 (92%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN N
Sbjct: 593 RILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTN 652
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
LAISVIHGAGGSGKSQALQTLLRQ P LPIEVVL
Sbjct: 653 LAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVL 686
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 166 bits (420), Expect = 3e-39
Identities = 81/94 (86%), Positives = 87/94 (92%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN N
Sbjct: 593 RILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTN 652
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
LAISVIHGAGGSGKSQALQTLLRQ P LPIEVVL
Sbjct: 653 LAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVL 686
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 166 bits (420), Expect = 3e-39
Identities = 81/94 (86%), Positives = 87/94 (92%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN N
Sbjct: 593 RILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTN 652
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
LAISVIHGAGGSGKSQALQTLLRQ P LPIEVVL
Sbjct: 653 LAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVL 686
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (414), Expect = 1e-38
Identities = 80/94 (85%), Positives = 86/94 (91%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN N
Sbjct: 593 RILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTN 652
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
LAISVIHGAGGSGKSQALQTLLRQ P LPIEVVL
Sbjct: 653 LAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVL 686
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 164 bits (414), Expect = 1e-38
Identities = 80/94 (85%), Positives = 86/94 (91%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN N
Sbjct: 593 RILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTN 652
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
LAISVIHGAGGSGKSQALQTLLRQ P LPIEVVL
Sbjct: 653 LAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVL 686
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 163 bits (413), Expect = 2e-38
Identities = 80/94 (85%), Positives = 85/94 (90%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L+TLR LNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+QTWKETQTMLTEN
Sbjct: 598 RILSTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTMLTENTQTE 657
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
LAISVIHGAGGSGKSQALQTLLRQ+ LPIEVVL
Sbjct: 658 LAISVIHGAGGSGKSQALQTLLRQDHSLPIEVVL 691
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 162 bits (410), Expect = 4e-38
Identities = 79/95 (83%), Positives = 86/95 (90%)
Frame = +3
Query: 3 SKVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTA 182
+++L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ MLTEN
Sbjct: 592 ARILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQAMLTENSQT 651
Query: 183 NLAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
NLAISVIHGAGGSGKSQALQTLLRQ P LPIEVVL
Sbjct: 652 NLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVL 686
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 158 bits (400), Expect = 6e-37
Identities = 76/94 (80%), Positives = 84/94 (89%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++++TLR NR+PTPW PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTML EN N
Sbjct: 593 RIISTLRSFNRYPTPWNPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTMLAENSQTN 652
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
LAISVIHGAGGSGKSQALQTLLRQ P LPIEVVL
Sbjct: 653 LAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVL 686
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 144 bits (364), Expect = 9e-33
Identities = 68/94 (72%), Positives = 79/94 (84%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
KV+ TL+ LNR PTPW PDR RARA+ SD+KNSRTGKALH+E+Q WKETQT LTE
Sbjct: 574 KVVITLKQLNRSPTPWTPDRLRARAYASDIKNSRTGKALHKESQNWKETQTRLTETSETR 633
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
L +SVIHGAGGSGKSQALQT+LR +P+LP+EVVL
Sbjct: 634 LGLSVIHGAGGSGKSQALQTMLRNHPDLPVEVVL 667
>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 135 bits (339), Expect = 7e-30
Identities = 63/77 (81%), Positives = 71/77 (92%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ N
Sbjct: 593 QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652
Query: 186 LAISVIHGAGGSGKSQA 236
LAISVIHGAGGSGKSQA
Sbjct: 653 LAISVIHGAGGSGKSQA 669
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 116 bits (290), Expect = 3e-24
Identities = 54/94 (57%), Positives = 72/94 (76%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L L+ L+R PT W PD RA++FTSD+KN RTGK L +E+Q+WKE QT+ ++
Sbjct: 668 ELLDLLKALSRMPTLWTPDTLRAKSFTSDIKNGRTGKCLQQESQSWKEAQTLKVDHNIRP 727
Query: 186 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
+ +SVIHGAGGSGKS ALQ LLR +PELPI+V+L
Sbjct: 728 VPLSVIHGAGGSGKSAALQDLLRDHPELPIQVIL 761
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 106 bits (265), Expect = 3e-21
Identities = 51/93 (54%), Positives = 67/93 (72%)
Frame = +3
Query: 9 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 188
V+ L L+R PTPW P RAR++TSD+KN RTG L +E+ TWKETQT+ E + +
Sbjct: 601 VMGVLEKLSRKPTPWTPCPLRARSYTSDIKNHRTGALLLKESATWKETQTLKAERLEKTV 660
Query: 189 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
+SVIHG GGSGKS A Q LLRQ+P++ ++VVL
Sbjct: 661 GLSVIHGCGGSGKSFAFQELLRQHPDVDLQVVL 693
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus]
gi|56792005|gb|AAW30448.1| viral replicase [Hydrangea
ringspot virus]
Length = 1386
Score = 106 bits (265), Expect = 3e-21
Identities = 51/93 (54%), Positives = 67/93 (72%)
Frame = +3
Query: 9 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 188
V+ L L+R PTPW P RAR++TSD+KN RTG L +E+ TWKETQT+ E + +
Sbjct: 601 VMGVLEKLSRKPTPWTPCPLRARSYTSDIKNHRTGALLLKESATWKETQTLKAERLEKTV 660
Query: 189 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
+SVIHG GGSGKS A Q LLRQ+P++ ++VVL
Sbjct: 661 GLSVIHGCGGSGKSFAFQELLRQHPDVDLQVVL 693
>gb|AFM77886.1| replicase [Hosta virus X]
Length = 1473
Score = 102 bits (253), Expect = 7e-20
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = +3
Query: 6 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 185
++L TLR + R PT W PD +RARA+TSD+KN RTG A+H Q WKET + EN
Sbjct: 671 EILETLRSVARAPTSWKPDASRARAYTSDIKNRRTGAAVHMAPQAWKETMDFIAENAERT 730
Query: 186 LAISVIHGAGGSGKSQALQTLLRQ 257
L ISVIHGAGGSGKS+ LQ +L +
Sbjct: 731 LHISVIHGAGGSGKSRCLQEMLNK 754
>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
RecName: Full=RNA replication protein; AltName: Full=176
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
protein product [Papaya mosaic virus]
gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
virus]
Length = 1547
Score = 100 bits (249), Expect = 2e-19
Identities = 55/93 (59%), Positives = 63/93 (67%)
Frame = +3
Query: 9 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 188
V TL GL R PTP+ P+ RARA+TSDVKN R G L ++ + W L E L
Sbjct: 756 VYKTLDGLARAPTPYSPNPIRARAYTSDVKNCRIGALLRQQGKEWGCRFDALVEAGKREL 815
Query: 189 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
AISVIHGAGGSGKSQALQTL++ NPEL I VVL
Sbjct: 816 AISVIHGAGGSGKSQALQTLIKDNPELDITVVL 848
>ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X]
gi|14582654|gb|AAK69579.1|AF308158_1 RNA-dependent RNA
polymerase [Cactus virus X]
Length = 1543
Score = 90.9 bits (224), Expect = 2e-16
Identities = 47/93 (50%), Positives = 64/93 (68%)
Frame = +3
Query: 9 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 188
+L ++ ++R PTP+ D RA+AF SDVKN R G L +++ W E+ + TE + +L
Sbjct: 761 LLEKIKKIHRSPTPFTYDPLRAKAFGSDVKNLRVGALLRHQSKEWLESFSRRTEKDSRSL 820
Query: 189 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
A++VIHGAGGSGKSQALQ LR NP+ I VVL
Sbjct: 821 ALTVIHGAGGSGKSQALQDFLRANPDNRITVVL 853
>ref|YP_054407.1| replication-associated protein [Opuntia virus X]
gi|38146353|gb|AAR11547.1| replication-associated protein
[Opuntia virus X]
Length = 1555
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/90 (50%), Positives = 60/90 (66%)
Frame = +3
Query: 18 TLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAIS 197
TL+ ++R PTP+ PD RA++F SDVKN R G L +++ W +T TE +A+S
Sbjct: 777 TLKQIHRLPTPFLPDPLRAKSFGSDVKNLRVGALLKHQSKEWLDTFGRKTEIEPRQVALS 836
Query: 198 VIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
VIHG GGSGKS A+Q +RQNPE I V+L
Sbjct: 837 VIHGVGGSGKSHAIQEWIRQNPEEEIVVIL 866
>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
replicase [Alternanthera mosaic virus]
Length = 1541
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/93 (49%), Positives = 59/93 (63%)
Frame = +3
Query: 9 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 188
+L L R PTP+ P RA+A++SDVKNSR G L ++ + W L EN L
Sbjct: 750 LLKMLNSQARAPTPFSPSPIRAKAYSSDVKNSRIGALLRQQGKDWGHRFDSLVENGQRQL 809
Query: 189 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
AISVIHGAGGSGKS+ALQ L+ NP+ + +VL
Sbjct: 810 AISVIHGAGGSGKSRALQMYLKDNPDADVTIVL 842
>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/93 (49%), Positives = 59/93 (63%)
Frame = +3
Query: 9 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 188
+L L R PTP+ P RA+A++SDVKNSR G L ++ + W L EN L
Sbjct: 750 LLKMLNDQARAPTPFSPSPIRAKAYSSDVKNSRIGALLRQQGKDWGHRFDSLVENGQRQL 809
Query: 189 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVL 287
AISVIHGAGGSGKS+ALQ L+ NP+ + +VL
Sbjct: 810 AISVIHGAGGSGKSRALQMYLKDNPDADVTIVL 842