BLASTX nr result

ID: Achyranthes22_contig00033210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00033210
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                 70   4e-10
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                    58   1e-06

>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
 Frame = +1

Query: 13  CKRCGKSHHGRNCEGKLYQCYYCGKEGHREFECYSKHGFPPRAXXXXXXXXXXXXXXXXX 192
           CK C K+H G++C+G+L  C+YC K+GHRE+ECY+KHG   +                  
Sbjct: 257 CKFCDKNHPGKDCKGELVTCHYCQKKGHREYECYTKHGKGLKIQGNGNQARPGSNQIGNQ 316

Query: 193 XFQPRGQQFSGPKFEQKPQLQGGYRGNQQGFTKPQQPTGKVSTLSLQEADR-CDVVT 360
             +P GQ   G     +P        N        +P GKV  +S  EA+R  DVVT
Sbjct: 317 GPKPGGQNNQGN--HSRPAANDNSAQN--------KPAGKVFVMSHNEAERSADVVT 363


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = +1

Query: 1   RTFGCKRCGKSHHGRNCEGKLYQCYYCGKEGHREFECYSKHGFPP 135
           R + C++C  +H G++CEG   +C  CGK GHR +ECYSK+   P
Sbjct: 275 RVYRCRKCPNNHPGKDCEGNKVECRECGKMGHRAYECYSKNKLNP 319


Top