BLASTX nr result

ID: Achyranthes22_contig00033155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00033155
         (620 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu...    62   1e-07
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...    59   1e-06

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = +2

Query: 389 NCGILGVGSSINWRKHRVKQVASCGTSIESSDSISMVDSKAKNDKSVERVLEALQSMEDP 568
           N  +L  G  +NW+KHR KQV  CG  I SS  + +V  K ++  S E V   L+S+ DP
Sbjct: 43  NLKVLPSGCRVNWKKHRKKQVGVCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDP 102

Query: 569 AMALDFFKSLARKPYVV 619
             A  FF S+A  P V+
Sbjct: 103 NQAFSFFNSVAEMPRVI 119


>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Citrus sinensis]
          Length = 1107

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = +2

Query: 293 IIAESSNYAEATLSIKTSYSLKLDGFLGESTRNCGILGVGS-SINWRKHRVKQVASCGTS 469
           ++ +SS+   +T+S   +++         +  + G L VG+  +NW+KH  KQV  CG  
Sbjct: 4   LVIDSSSTCCSTISYSFAFTYSKLHASSYNNGSVGGLKVGNLKVNWKKHWKKQVGFCGYV 63

Query: 470 IESSDSISMVDSKAKNDKSVERVLEALQSMEDPAMALDFFKSLARKPYVV 619
           ++SS+ + +V  K +N  + E V+  L+S  D      +FKS+A  PYVV
Sbjct: 64  MKSSNEVVVVKGKPRNGLTSEEVIRVLRSFSDLDSTYSYFKSVAELPYVV 113


>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
           gi|550337245|gb|EEE92232.2| hypothetical protein
           POPTR_0006s28060g [Populus trichocarpa]
          Length = 1115

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/82 (37%), Positives = 47/82 (57%)
 Frame = +2

Query: 374 GESTRNCGILGVGSSINWRKHRVKQVASCGTSIESSDSISMVDSKAKNDKSVERVLEALQ 553
           GE      +   GS++NW+K+  KQVA CG +++S +   +V+ K +   S + VL  L 
Sbjct: 40  GEKFGTLRVFPFGSNVNWKKNNKKQVAFCGFALKSQNEELVVNGKPRKGSSSDEVLGVLH 99

Query: 554 SMEDPAMALDFFKSLARKPYVV 619
           S+ DP  AL +FKS+   P VV
Sbjct: 100 SISDPIHALFYFKSVGELPNVV 121


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 30/82 (36%), Positives = 43/82 (52%)
 Frame = +2

Query: 374 GESTRNCGILGVGSSINWRKHRVKQVASCGTSIESSDSISMVDSKAKNDKSVERVLEALQ 553
           G   RN   L  GS   W KH+ +QV   G +++SS  + +   K KN  S + V+  L 
Sbjct: 40  GRRVRNLNFLTCGSLSIWEKHKERQVGFGGVAVKSSHGLVVAKRKPKNALSSKEVMAVLN 99

Query: 554 SMEDPAMALDFFKSLARKPYVV 619
           S+ DP  A  +F S+A  P+VV
Sbjct: 100 SILDPTDAFSYFNSVAEMPFVV 121


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