BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00029766
         (1820 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   689   0.0  
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   645   0.0  
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   625   e-176
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   603   e-170
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr...   602   e-169
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...   602   e-169
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...   602   e-169
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   600   e-169
gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus pe...   587   e-165
gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Syna...   584   e-164
gb|EOY33214.1| BSD domain (BTF2-like transcription factors, Syna...   572   e-160
ref|NP_175971.3| probable RNA polymerase II transcription factor...   567   e-159
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   566   e-159
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc...   566   e-158
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr...   563   e-157
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...   562   e-157
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc...   561   e-157
gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus...   559   e-156
ref|XP_002530618.1| TFIIH basal transcription factor complex sub...   558   e-156
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g...   556   e-155

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  689 bits (1778), Expect = 0.0
 Identities = 353/510 (69%), Positives = 408/510 (80%), Gaps = 7/510 (1%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA------QLSTREMERRIKLLQEDSELGKLHMQLVIGKIL 1657
            FVG+AL K  + SK  SE+ A      QLST EMERRIKLL+EDSEL KLH Q V+  +L
Sbjct: 95   FVGRALAKFSEASKAGSEQSAVKLFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVL 154

Query: 1656 TEDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFA 1477
            TE EFWATRKKLLDG  +R+S QR GFKSAMISD+KPLTDGRTN+VTF+LTPEIIHQIFA
Sbjct: 155  TEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFA 214

Query: 1476 EKPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDI 1297
            EKPAVHQAFLN+VP KM+EKDFW KYCRAEYLH T+N              AVFLK DDI
Sbjct: 215  EKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDI 274

Query: 1296 LANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDL 1117
            LANEARRKIR+VDPTLDMEADQGDDY HLPDHGI RDG+KEI + Q  Y+QY+R L QDL
Sbjct: 275  LANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQ--YEQYRRTLSQDL 332

Query: 1116 NRHAAVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELED 937
            NRHAAVVLEGR +DVE+ DTRTVAEALAK+K+VE ANE S+ +  +ERL R+ RMTE+ED
Sbjct: 333  NRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIED 392

Query: 936  LQAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLF 757
            LQAP D P A LCIKDPRDYF SQQANALKTLG+   G+K + C +STQ+AY  +R  + 
Sbjct: 393  LQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFIS 452

Query: 756  DIKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWT 577
            +IK VGL   I+KP++A+KVLN LT NISSTK++LG+N +E+VLD  P  TKEELL+HWT
Sbjct: 453  EIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELLHHWT 512

Query: 576  SIQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPM 397
            SIQELL+HFWSSYPITT +L  K +RLKDAM QIYPKLQEIKESVQSD RHQ+SLLVQPM
Sbjct: 513  SIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPM 572

Query: 396  LQALDEAFVHYERDLEKR-MKPKSKPNGTI 310
            LQALD AF HY+ D +KR  +   +PNG +
Sbjct: 573  LQALDAAFAHYDADQQKRSARSGERPNGFV 602


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  645 bits (1663), Expect = 0.0
 Identities = 344/550 (62%), Positives = 398/550 (72%), Gaps = 49/550 (8%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA------QLSTREMERRIKLLQED---------------- 1705
            FVGKAL K  + SK  SE+ A      QLST EMERRIKLL+ED                
Sbjct: 95   FVGKALAKFSEASKAGSEQSAVKLFDEQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKG 154

Query: 1704 ---------------------------SELGKLHMQLVIGKILTEDEFWATRKKLLDGGN 1606
                                       SEL KLH Q V+  +LTE EFWATRKKLLDG  
Sbjct: 155  ILPLFGETIIAMKLIDSGIASKVKWDCSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNT 214

Query: 1605 NRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLNYVPKKM 1426
            +R+S QR GFKSAMISD+KPLTDGRTN+VTF+LTPEIIHQIFAEKPAVHQAFLN+VP KM
Sbjct: 215  SRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKM 274

Query: 1425 SEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANEARRKIRKVDPTLD 1246
            +EKDFW KYCRAEYLH T+N              AVFLK DDILA+EARRKIR+VDPTLD
Sbjct: 275  TEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLD 334

Query: 1245 MEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHAAVVLEGRSLDVEI 1066
            MEADQGDDY HLPDHGI RDG+KEI + Q  Y+QY+R L QDLNRHAAVVLEGR +DVE+
Sbjct: 335  MEADQGDDYMHLPDHGIFRDGSKEIIDPQ--YEQYRRTLSQDLNRHAAVVLEGRPIDVEL 392

Query: 1065 GDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAPCDPPLAPLCIKDP 886
             DTRTVAEALAK+K+VE ANE S+ +  +ERL R+ RMTE+EDLQAP D P A LCIKDP
Sbjct: 393  EDTRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDP 452

Query: 885  RDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKCVGLQTSIIKPEVA 706
            RDYF SQQANALKTLG+   G+K + C +S+Q+AY  +R  + +IK VGL   I+KP++A
Sbjct: 453  RDYFDSQQANALKTLGDTLAGSKQIKCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIA 512

Query: 705  IKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQELLKHFWSSYPITT 526
            +KVLN LT NISSTK++LG+N +E+VLD  P  TKEELL+HWTSIQELL+HFWSSYPITT
Sbjct: 513  LKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITT 572

Query: 525  QHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQALDEAFVHYERDLEK 346
             +L  K +RLKDAM QIYPKLQEIKESVQSD RHQ+SLLVQPMLQ   E          +
Sbjct: 573  TYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQRRRETLKR-----RR 627

Query: 345  RMKPKSKPNG 316
            R +P+  P G
Sbjct: 628  RSEPQEGPGG 637


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
            gi|548861733|gb|ERN19104.1| hypothetical protein
            AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  625 bits (1613), Expect = e-176
 Identities = 322/491 (65%), Positives = 379/491 (77%), Gaps = 3/491 (0%)
 Frame = -3

Query: 1755 QLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDEFWATRKKLLDGGNNRSSTQRAGF 1576
            QLS  EME+R+ LL+EDSEL KLH QLVIG +LTE EFWATRK LLD   +++S QRAGF
Sbjct: 126  QLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQRAGF 185

Query: 1575 KSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLNYVPKKMSEKDFWTKYC 1396
            KSAM++D++PLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFL +VP KMSE+DFWTKYC
Sbjct: 186  KSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKYC 245

Query: 1395 RAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANEARRKIRKVDPTLDMEADQGDDYT 1216
            RAEYLH TKN              AVFLK DDILA+EARRKIR+VDPT+DM AD GDDY+
Sbjct: 246  RAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYS 305

Query: 1215 HLPDHGIPRDGTKEI--SESQTPYDQYKRNLLQDLNRHAAVVLEGRSLDVEIGDTRTVAE 1042
            HLP HGI RDG+KE   SES+ P    KR LLQDLNRHAAVVLEGR+LDVE+GDTRTVAE
Sbjct: 306  HLPGHGILRDGSKESVDSESELP----KRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAE 361

Query: 1041 ALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAPCDPPLAPLCIKDPRDYFYSQQ 862
            ALA++KQ E+A ETS+   NQ+RL RV +MTE+EDLQAP   P APLCIKDPR+YF SQ+
Sbjct: 362  ALARSKQAEVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQR 421

Query: 861  ANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKCVGLQTSIIKPEVAIKVLNSLT 682
            ANA K  G+   G     CH+ST+ AY  +R  + ++K VG +  I+ P++A+KVLN + 
Sbjct: 422  ANAFKATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVN 481

Query: 681  HNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQELLKHFWSSYPITTQHLSIKVN 502
              +SST   LG+N + TVLD  P RTKEELL HWTSIQELL+HFWSSYP+TT  L  KVN
Sbjct: 482  QQLSSTDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVN 541

Query: 501  RLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQALDEAFVHYERDLEKR-MKPKSK 325
            R+KDAM QIY KL E+KESVQS+ RHQ+SLLV+PMLQ LDEAF HY+ +++KR  K  SK
Sbjct: 542  RVKDAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKTMSK 601

Query: 324  PNGTI*GSFPT 292
               T  G F T
Sbjct: 602  VGMTGLGVFYT 612


>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum tuberosum]
          Length = 599

 Score =  603 bits (1556), Expect = e-170
 Identities = 315/509 (61%), Positives = 379/509 (74%), Gaps = 6/509 (1%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA-----QLSTREMERRIKLLQEDSELGKLHMQLVIGKILT 1654
            FV  A+    ++ K  SE+PA     QLS  EM RRIKLLQE+SEL KLH QLVIG IL+
Sbjct: 94   FVASAIAACGEIGKATSEKPAVPHDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILS 153

Query: 1653 EDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAE 1474
            E EFWA RKKLL+   N+   QR   K+ M S +KPL+DG+TN+VTF+LTPE+IHQIFAE
Sbjct: 154  EAEFWAARKKLLEQSENKKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAE 212

Query: 1473 KPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDIL 1294
            KPAV QA+L +VP KMSEK+FWTKY RAEYLHSTKN              AVFLKQDD+L
Sbjct: 213  KPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDML 272

Query: 1293 ANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLN 1114
             +EARRKIR+VDPTLDMEAD+GDDY HLPDHG+P+  TKEI E Q  Y+ +KR+  Q LN
Sbjct: 273  VSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLPQGETKEILEPQ--YEPFKRSFSQYLN 330

Query: 1113 RHAAVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDL 934
            +HAAVVL GR +DVE+GDTR+VAEA  +  Q E A E S+ N  +ER+ +V R+ E+EDL
Sbjct: 331  QHAAVVLRGRVIDVELGDTRSVAEAFTRTYQAEQATEVSDENAYRERVKKVSRVAEIEDL 390

Query: 933  QAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFD 754
            Q P DPP+A L IKDPRDYF SQQANA+K LG+   G + +   VS ++A+  +++S+ +
Sbjct: 391  QGPQDPPVALLSIKDPRDYFDSQQANAIKALGDAETGIRQLKFSVSKEEAFCSLKDSISE 450

Query: 753  IKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTS 574
            I   GL   II PEVA+KV N L+ NISSTKY LG+N  E+VLD  PS TK ELL HWTS
Sbjct: 451  INSQGLIEPIISPEVALKVFNGLSQNISSTKYYLGKNPHESVLDQLPSATKNELLLHWTS 510

Query: 573  IQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPML 394
            IQELLKHFWSSYPITT++   KV RLKDAM QIYPKLQEIKESVQSD+RHQ+SLLVQPML
Sbjct: 511  IQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPML 570

Query: 393  QALDEAFVHYERDLEKR-MKPKSKPNGTI 310
            QALD AF HY+ D++KR  K   +PNG +
Sbjct: 571  QALDAAFAHYDADIQKRSAKSGERPNGFV 599


>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555944|gb|ESR65958.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 564

 Score =  602 bits (1553), Expect = e-169
 Identities = 324/511 (63%), Positives = 384/511 (75%), Gaps = 8/511 (1%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA------QLSTREMERRIKLLQEDSELGKLHMQLVIGKIL 1657
            FV K LEK  +      E+ A      QLS  EM+ RIKLLQE+SEL KLH Q V G IL
Sbjct: 62   FVSKVLEKSKETPNAALEKSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNIL 121

Query: 1656 TEDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFA 1477
            TE EFWA RKKLLD   ++ S QR GFKSAMISDI+P TDGRTNKVTFSLTPEII QIFA
Sbjct: 122  TEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFA 181

Query: 1476 EKPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDI 1297
            EKPAVH+AFLN+VP KM+E +FWTKYCRAEYL  TKN              AVFLK+DDI
Sbjct: 182  EKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDI 241

Query: 1296 LANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDL 1117
            LANE R+KIR+VDPTLDMEAD+GDDYTHLPDHGI RDGTKE +E Q+  + Y+R LLQDL
Sbjct: 242  LANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQS--EHYRRTLLQDL 299

Query: 1116 NRHAAVVLEGRSLDVEIGD-TRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELE 940
            NRHAAVVLEGR++DVE  D TR +AEALA++K+    NE ++ N N+ERL+R  R+ E+E
Sbjct: 300  NRHAAVVLEGRTIDVEREDSTRALAEALARSKR---GNEGADNNANEERLDRTPRVAEIE 356

Query: 939  DLQAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESL 760
            DLQAP   PLAPL IKD R+YF SQQAN LK   ++     SM C +S Q+AY  +R+++
Sbjct: 357  DLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDS---QASMKCSLSRQEAYGSVRDAI 413

Query: 759  FDIKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHW 580
             +IK +GL   I+ PEVA+KV + LTHNISS KY+LG+N RETVLD  PS TKE+LL HW
Sbjct: 414  SEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHW 473

Query: 579  TSIQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQP 400
             SIQELLKHFWSSYPITT +L  KVNRLKDA+  IYP+L+E+KES+ +DLRHQ+SLLV+P
Sbjct: 474  MSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRP 533

Query: 399  MLQALDEAFVHYERDLEKR-MKPKSKPNGTI 310
            M QALD A  HY+ DL+KR  K   KPNG +
Sbjct: 534  MQQALDAAIQHYDADLQKRSAKSGEKPNGYV 564


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555943|gb|ESR65957.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score =  602 bits (1553), Expect = e-169
 Identities = 324/511 (63%), Positives = 384/511 (75%), Gaps = 8/511 (1%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA------QLSTREMERRIKLLQEDSELGKLHMQLVIGKIL 1657
            FV K LEK  +      E+ A      QLS  EM+ RIKLLQE+SEL KLH Q V G IL
Sbjct: 95   FVSKVLEKSKETPNAALEKSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNIL 154

Query: 1656 TEDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFA 1477
            TE EFWA RKKLLD   ++ S QR GFKSAMISDI+P TDGRTNKVTFSLTPEII QIFA
Sbjct: 155  TEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFA 214

Query: 1476 EKPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDI 1297
            EKPAVH+AFLN+VP KM+E +FWTKYCRAEYL  TKN              AVFLK+DDI
Sbjct: 215  EKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDI 274

Query: 1296 LANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDL 1117
            LANE R+KIR+VDPTLDMEAD+GDDYTHLPDHGI RDGTKE +E Q+  + Y+R LLQDL
Sbjct: 275  LANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQS--EHYRRTLLQDL 332

Query: 1116 NRHAAVVLEGRSLDVEIGD-TRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELE 940
            NRHAAVVLEGR++DVE  D TR +AEALA++K+    NE ++ N N+ERL+R  R+ E+E
Sbjct: 333  NRHAAVVLEGRTIDVEREDSTRALAEALARSKR---GNEGADNNANEERLDRTPRVAEIE 389

Query: 939  DLQAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESL 760
            DLQAP   PLAPL IKD R+YF SQQAN LK   ++     SM C +S Q+AY  +R+++
Sbjct: 390  DLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDS---QASMKCSLSRQEAYGSVRDAI 446

Query: 759  FDIKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHW 580
             +IK +GL   I+ PEVA+KV + LTHNISS KY+LG+N RETVLD  PS TKE+LL HW
Sbjct: 447  SEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHW 506

Query: 579  TSIQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQP 400
             SIQELLKHFWSSYPITT +L  KVNRLKDA+  IYP+L+E+KES+ +DLRHQ+SLLV+P
Sbjct: 507  MSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRP 566

Query: 399  MLQALDEAFVHYERDLEKR-MKPKSKPNGTI 310
            M QALD A  HY+ DL+KR  K   KPNG +
Sbjct: 567  MQQALDAAIQHYDADLQKRSAKSGEKPNGYV 597


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Citrus sinensis]
          Length = 597

 Score =  602 bits (1552), Expect = e-169
 Identities = 325/511 (63%), Positives = 383/511 (74%), Gaps = 8/511 (1%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA------QLSTREMERRIKLLQEDSELGKLHMQLVIGKIL 1657
            FV K LEK  +      E+ A      QLS  EM+ RIKLLQE+SEL KLH Q V G IL
Sbjct: 95   FVSKVLEKSKETPNAALEKSAIKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNIL 154

Query: 1656 TEDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFA 1477
            TE EFWA RKKLLD   ++ S QR GFKSAMISDI+P TDGRTNKVTFSLTPEII QIFA
Sbjct: 155  TEAEFWAARKKLLDIDPSKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFA 214

Query: 1476 EKPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDI 1297
            EKPAVH+AFLN+VP KM+E +FWTKYCRAEYL  TKN              AVFLK+DDI
Sbjct: 215  EKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDI 274

Query: 1296 LANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDL 1117
            LANE R+KIR+VDPTLDMEAD+GDDYTHLPDHGI RDGTKE +E Q+  + Y+R LLQDL
Sbjct: 275  LANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQS--EHYRRTLLQDL 332

Query: 1116 NRHAAVVLEGRSLDVEIGD-TRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELE 940
            NRHAAVVLEGR++DVE  D TR +AEALA++K+    NE ++ N N+ERL+R  R+ E+E
Sbjct: 333  NRHAAVVLEGRTIDVEREDSTRALAEALARSKR---GNEGADNNANEERLDRTPRVAEIE 389

Query: 939  DLQAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESL 760
            DLQAP   PLAPL IKD R+YF SQQAN LK   +      SM C +S Q+AY  +R+++
Sbjct: 390  DLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRD---AQASMKCSLSKQEAYRSVRDAI 446

Query: 759  FDIKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHW 580
             +IK +GL   I+ PEVA+KV + LTHNISS KY+LG+N RETVLD  PS TKE+LL HW
Sbjct: 447  SEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHW 506

Query: 579  TSIQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQP 400
             SIQELLKHFWSSYPITT +L  KVNRLKDA+  IYP+L+E+KES+ +DLRHQ+SLLV+P
Sbjct: 507  MSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRP 566

Query: 399  MLQALDEAFVHYERDLEKR-MKPKSKPNGTI 310
            M QALD A  HY+ DL+KR  K   KPNG I
Sbjct: 567  MQQALDAAIQHYDADLQKRSAKSGEKPNGYI 597


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  600 bits (1548), Expect = e-169
 Identities = 312/509 (61%), Positives = 379/509 (74%), Gaps = 6/509 (1%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA-----QLSTREMERRIKLLQEDSELGKLHMQLVIGKILT 1654
            FV  A+    ++ K  SE+PA     QLS  EM RRIKLLQE+SEL  LH +LVI  IL+
Sbjct: 94   FVASAIAACGEIGKATSEKPAVPHDEQLSATEMGRRIKLLQENSELQNLHRELVIAGILS 153

Query: 1653 EDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAE 1474
            E EFWA RKKLL+   N+   QR   K+ M S +KPL+DG+TN+VTF+LTPE+IHQIFAE
Sbjct: 154  ETEFWAARKKLLEQSENKKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAE 212

Query: 1473 KPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDIL 1294
            KPAV QA+L +VP KMSEK+FWTKY RAEYLHSTKN              AVFLKQDD+L
Sbjct: 213  KPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDML 272

Query: 1293 ANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLN 1114
             +EARRKIR+VDPTLDMEAD+GDDY HLPDHG+P+  TKEI E Q  Y+ +KR+  Q LN
Sbjct: 273  VSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLPQGETKEILEPQ--YEPFKRSFSQYLN 330

Query: 1113 RHAAVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDL 934
            +HAAVVL+GR +DVE+GDTR+VAEA  +  Q E A E S+ N  +ER+ +V R+ E+EDL
Sbjct: 331  QHAAVVLQGRVIDVELGDTRSVAEAFTRTNQAEQATEVSDENAYRERVKKVSRVAEIEDL 390

Query: 933  QAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFD 754
            Q P DPP+A L IKDPRDYF SQQANA+K LG+   G + +   VS ++A+  +++S+ +
Sbjct: 391  QGPRDPPVALLSIKDPRDYFDSQQANAIKALGDAETGIRQLKFRVSKEEAFCSLKDSISE 450

Query: 753  IKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTS 574
            I   GL   II PEVA+KV N L+ NISSTKY+LG+N  E+VLD  PS TK ELL HWTS
Sbjct: 451  INSQGLIEPIISPEVALKVFNLLSQNISSTKYHLGKNPHESVLDQLPSATKNELLLHWTS 510

Query: 573  IQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPML 394
            IQELLKHFWSSYPITT++   KV RLKDAM QIYPKLQEIKESVQSD+RHQ+SLLVQPML
Sbjct: 511  IQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPML 570

Query: 393  QALDEAFVHYERDLEKR-MKPKSKPNGTI 310
            QALD AF HY+ DL+KR  +   +PNG +
Sbjct: 571  QALDAAFAHYDADLQKRSARSGERPNGFV 599


>gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
          Length = 563

 Score =  587 bits (1513), Expect = e-165
 Identities = 302/482 (62%), Positives = 369/482 (76%), Gaps = 2/482 (0%)
 Frame = -3

Query: 1755 QLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDEFWATRKKLLDGGNNRSSTQRAGF 1576
            QLST EM+ R+KLLQEDSEL KLHMQ VI  +LTE EFWATRKKLLDG +   S QR GF
Sbjct: 91   QLSTAEMQLRMKLLQEDSELQKLHMQFVISGVLTESEFWATRKKLLDGDSRTKSKQRVGF 150

Query: 1575 KSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLNYVPKKMSEKDFWTKYC 1396
            +S+MI D KP+TDGR NKVTF+LTPEI +QIFA KPAVHQAFL  VP KM+EKDFWTKY 
Sbjct: 151  RSSMILDTKPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYF 210

Query: 1395 RAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANEARRKIRKVDPTLDMEADQGDDYT 1216
            RAEYLHST+N              A+FLK+D ILA+EARRKIR+VDPTLDMEADQGDDYT
Sbjct: 211  RAEYLHSTRNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYT 270

Query: 1215 HLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHAAVVLEGRSLDVEIGDTRTVAEAL 1036
            HLPDHGI RDG+K+++E Q   + Y+R L QDLNR  AVVL+GR++DV++ D RTVAEAL
Sbjct: 271  HLPDHGIFRDGSKDVTELQN--ELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEAL 328

Query: 1035 AKAKQVELANETSEANNNQERLNRVCRMTELEDLQAPCDPPLAPLCIKDPRDYFYSQQAN 856
             ++++       S+ +  QERL+R+ RMTE+EDLQ   D P+A LCIKDPRDYF +QQ N
Sbjct: 329  MQSRR------ESDESAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVN 382

Query: 855  ALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKCVGLQTSIIKPEVAIKVLNSLTHN 676
            ALKTL ++  G +   C ++T++AY  +RE++  IK +GL+ S + PE+AI VLN LT N
Sbjct: 383  ALKTLDDSRTGTEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQN 442

Query: 675  ISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQELLKHFWSSYPITTQHLSIKVNRL 496
            ISSTKY LG+N +++VLD  P++TKEELL+HW SIQELL+HFWSSYPITT +LS KV RL
Sbjct: 443  ISSTKYQLGKNPQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRL 502

Query: 495  KDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQALDEAFVHYERDLEKRMKPK--SKP 322
            KDAM QIY +L+EIK   QSD RHQ+SLLV+PM QALD AF H++ DL+KR        P
Sbjct: 503  KDAMSQIYRQLEEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETP 559

Query: 321  NG 316
            NG
Sbjct: 560  NG 561


>gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Synapse-associated
            proteins and DOS2-like proteins), putative isoform 1
            [Theobroma cacao]
          Length = 646

 Score =  584 bits (1506), Expect = e-164
 Identities = 316/553 (57%), Positives = 385/553 (69%), Gaps = 52/553 (9%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEE--PAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDE 1645
            FVGK L K  +VS+K +      QLS  EME RIKLL+EDSEL KLH Q V+  +LTE E
Sbjct: 94   FVGKVLAKSGEVSEKPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAE 153

Query: 1644 FWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPA 1465
            FWATRKKLLD   N+ + QR GFKSAMISDIKP TDGRTNKVTF+LTPEII QIFAEKPA
Sbjct: 154  FWATRKKLLDREANKKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPA 213

Query: 1464 VHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANE 1285
            VH+AFL YVP KMSE+DFWTKY RAEYLHSTKN              AVFLKQDDILA+E
Sbjct: 214  VHRAFLTYVPNKMSERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASE 273

Query: 1284 ARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHA 1105
            +R KIR+VDPTLDM+AD+GDDYTHLPDHGI RDG+KE++ES+   + Y+R L QD+NRHA
Sbjct: 274  SRSKIRRVDPTLDMDADEGDDYTHLPDHGIFRDGSKEVTESEN--ELYRRTLSQDINRHA 331

Query: 1104 AVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAP 925
            AVVLEGR++DVE+ DTR+VAEALA++KQ       S  + ++ERL+RV RMTE+EDLQAP
Sbjct: 332  AVVLEGRAVDVELEDTRSVAEALARSKQESSTKGESYGDTSRERLDRVSRMTEIEDLQAP 391

Query: 924  CDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKC 745
             + PLAPLCIKDPRDYF SQQ NAL+T G+   G + + C +S+Q+ Y  +RES+  IK 
Sbjct: 392  NNLPLAPLCIKDPRDYFDSQQVNALRTSGDELAGTEQIKCSLSSQEVYGSLRESISVIKA 451

Query: 744  VGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQE 565
            +GL+  I+KPEVA +V ++LT +IS+TKYN+G+N +E+VLD  P + KEELL+HWTSI E
Sbjct: 452  MGLKDPIVKPEVAHQVFDALTQSISTTKYNIGKNPQESVLDRLPKKIKEELLHHWTSILE 511

Query: 564  LLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQ------------------------- 460
            LL+HFW+SYPITT +L  KVN         Y KL+                         
Sbjct: 512  LLRHFWASYPITTSYLYTKVNAALVLTLLSYQKLEAGKQTEGCHVTYLSTARVVLSNYPQ 571

Query: 459  ------------------------EIKESVQSDLRHQISLLVQPMLQALDEAFVHYERDL 352
                                    EIK SV SDLRHQ+SLL++PM QALD A  HYE D+
Sbjct: 572  VPFISSLLFYLLGSSDAKASYVWMEIKGSVPSDLRHQVSLLIRPMHQALDAAIQHYEADM 631

Query: 351  EKR-MKPKSKPNG 316
            +KR  +   +PNG
Sbjct: 632  QKRSARSGERPNG 644


>gb|EOY33214.1| BSD domain (BTF2-like transcription factors, Synapse-associated
            proteins and DOS2-like proteins) isoform 4, partial
            [Theobroma cacao]
          Length = 516

 Score =  572 bits (1475), Expect = e-160
 Identities = 293/455 (64%), Positives = 356/455 (78%), Gaps = 2/455 (0%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEE--PAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDE 1645
            FVGK L K  +VS+K +      QLS  EME RIKLL+EDSEL KLH Q V+  +LTE E
Sbjct: 50   FVGKVLAKSGEVSEKPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAE 109

Query: 1644 FWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPA 1465
            FWATRKKLLD   N+ + QR GFKSAMISDIKP TDGRTNKVTF+LTPEII QIFAEKPA
Sbjct: 110  FWATRKKLLDREANKKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPA 169

Query: 1464 VHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANE 1285
            VH+AFL YVP KMSE+DFWTKY RAEYLHSTKN              AVFLKQDDILA+E
Sbjct: 170  VHRAFLTYVPNKMSERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASE 229

Query: 1284 ARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHA 1105
            +R KIR+VDPTLDM+AD+GDDYTHLPDHGI RDG+KE++ES+   + Y+R L QD+NRHA
Sbjct: 230  SRSKIRRVDPTLDMDADEGDDYTHLPDHGIFRDGSKEVTESEN--ELYRRTLSQDINRHA 287

Query: 1104 AVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAP 925
            AVVLEGR++DVE+ DTR+VAEALA++KQ       S  + ++ERL+RV RMTE+EDLQAP
Sbjct: 288  AVVLEGRAVDVELEDTRSVAEALARSKQESSTKGESYGDTSRERLDRVSRMTEIEDLQAP 347

Query: 924  CDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKC 745
             + PLAPLCIKDPRDYF SQQ NAL+T G+   G + + C +S+Q+ Y  +RES+  IK 
Sbjct: 348  NNLPLAPLCIKDPRDYFDSQQVNALRTSGDELAGTEQIKCSLSSQEVYGSLRESISVIKA 407

Query: 744  VGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQE 565
            +GL+  I+KPEVA +V ++LT +IS+TKYN+G+N +E+VLD  P + KEELL+HWTSI E
Sbjct: 408  MGLKDPIVKPEVAHQVFDALTQSISTTKYNIGKNPQESVLDRLPKKIKEELLHHWTSILE 467

Query: 564  LLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQ 460
            LL+HFW+SYPITT +L  KVNRLKDAM  IYP+L+
Sbjct: 468  LLRHFWASYPITTSYLYTKVNRLKDAMSHIYPQLE 502


>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
            [Arabidopsis thaliana]
            gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
            Full=Probable RNA polymerase II transcription factor B
            subunit 1-1; AltName: Full=General transcription and DNA
            repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
            Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332195172|gb|AEE33293.1| probable RNA polymerase II
            transcription factor B subunit 1-1 [Arabidopsis thaliana]
          Length = 591

 Score =  567 bits (1461), Expect = e-159
 Identities = 306/506 (60%), Positives = 365/506 (72%), Gaps = 3/506 (0%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKD--SEEPAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDE 1645
            F+ KAL K      K   S    QLS +E+E R KLL+E+SEL +LH Q V  K+LTEDE
Sbjct: 94   FITKALAKCELEPNKSVVSTSSEQLSIKELELRFKLLRENSELQRLHKQFVESKVLTEDE 153

Query: 1644 FWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPA 1465
            FWATRKKLL   + R S Q+ G KS M+S IKP TDGRTN+VTF+LTPEII QIFAEKPA
Sbjct: 154  FWATRKKLLGKDSIRKSKQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPA 213

Query: 1464 VHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANE 1285
            V QAF+NYVP KM+EKDFWTKY RAEYL+STKN              AVFLK D+ILA E
Sbjct: 214  VRQAFINYVPSKMTEKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARE 273

Query: 1284 ARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHA 1105
             R KIR+VDPTLDMEADQGDDYTHL DHGI RDGT ++ E Q   DQ+KR+LLQDLNRHA
Sbjct: 274  TRHKIRRVDPTLDMEADQGDDYTHLMDHGIQRDGTMDVVEPQN--DQFKRSLLQDLNRHA 331

Query: 1104 AVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAP 925
            AVVLEGRS+DVE  DTR VAEAL + KQV  A+  +  + NQERL R+ R+  +EDLQAP
Sbjct: 332  AVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDLQAP 391

Query: 924  CDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKC 745
             + PLAPL IKDPRDYF SQQ N L        GAK +  +V   +AY  ++ES+ +I+ 
Sbjct: 392  QNFPLAPLSIKDPRDYFESQQGNVLNV----PRGAKGLKRNV--HEAYGLLKESILEIRA 445

Query: 744  VGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQE 565
             GL   +IKPEV+ +V +SLT  I++ K   G+N RE+ LD  P  TK+E+L+HWTSIQE
Sbjct: 446  TGLSDPLIKPEVSFEVFSSLTRTIATAKNINGKNPRESFLDRLPKSTKDEVLHHWTSIQE 505

Query: 564  LLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQAL 385
            LLKHFWSSYPITT +L  KV +LKDAM   Y KL+ +KESVQSDLRHQ+SLLV+PM QAL
Sbjct: 506  LLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQAL 565

Query: 384  DEAFVHYERDLEKR-MKPKSKPNGTI 310
            D AF HYE DL++R  K   +PNG +
Sbjct: 566  DAAFHHYEVDLQRRTAKSGERPNGYV 591


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
            lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
            ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  567 bits (1460), Expect = e-159
 Identities = 302/507 (59%), Positives = 366/507 (72%), Gaps = 4/507 (0%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKD--SEEPAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDE 1645
            F+ KAL K  +   K   S    QLS +E+E R KLL+E+SEL +LH Q V  K+LTEDE
Sbjct: 94   FITKALAKCEEEPNKSVVSTSSEQLSIKELELRFKLLRENSELQRLHKQFVESKVLTEDE 153

Query: 1644 FWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPA 1465
            FWATRKKLL   + R S Q+ G KS M+S IKP TDGRTN+VTF+LTPEII QIFAEKPA
Sbjct: 154  FWATRKKLLGKDSIRKSKQQVGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPA 213

Query: 1464 VHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANE 1285
            V QAF+NYVP KM+EKDFWTKY RAEYL+STKN              AVFLK D+ILA E
Sbjct: 214  VRQAFINYVPSKMTEKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARE 273

Query: 1284 ARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHA 1105
             R+KIR+VDPTLDMEADQGDDYTHL DHGI RDGT ++ E Q   DQ++R+LLQDLNRHA
Sbjct: 274  TRQKIRRVDPTLDMEADQGDDYTHLMDHGIQRDGTMDVVEPQN--DQFRRSLLQDLNRHA 331

Query: 1104 AVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAP 925
            AVVLEGRS+DVE  DTR VAEAL + KQV  A+  +  + N ERL R+ R+  +EDLQAP
Sbjct: 332  AVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGETTKDANLERLERMSRLAGMEDLQAP 391

Query: 924  CDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKC 745
             + PLAPL IKDPRDYF SQQ N L        GAK +  +V   +AY  ++ES+ +I+ 
Sbjct: 392  QNFPLAPLSIKDPRDYFESQQGNVLNV----PRGAKGLKRNV--HEAYGLLKESILEIRA 445

Query: 744  VGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQE 565
             GL   +I+PEV+ +V +SLT  IS+ K  +G+N RE+ LD  P  TK+E+L+HWTSIQE
Sbjct: 446  TGLSDPLIRPEVSFEVFSSLTRTISTAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQE 505

Query: 564  LLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQAL 385
            LL+HFWSSYPITT +L  KV +LKDAM   Y KL+ +KESVQSDLRHQ+SLLV+PM QAL
Sbjct: 506  LLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQAL 565

Query: 384  DEAFVHYERDLEKRMKPK--SKPNGTI 310
            D AF HYE DL++R       +PNG +
Sbjct: 566  DAAFQHYEADLQRRTAKSGGERPNGYV 592


>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Cicer arietinum]
          Length = 586

 Score =  566 bits (1459), Expect = e-158
 Identities = 294/502 (58%), Positives = 367/502 (73%)
 Frame = -3

Query: 1815 VGKALEKHPDVSKKDSEEPAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDEFWA 1636
            VG AL KH +  K  S+E  QLS  EM  RIKLLQEDS+L KLH  LV    LTE EFWA
Sbjct: 95   VGIALSKHVEPPKVVSDE--QLSPAEMTLRIKLLQEDSKLQKLHKDLVASGKLTESEFWA 152

Query: 1635 TRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQ 1456
            T+KKLLD   +R   QR GFK+++I D KP +DGR N+V F LTPEI +QIFA KPAVHQ
Sbjct: 153  TKKKLLDQDESRKLKQRIGFKNSLIFDTKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQ 212

Query: 1455 AFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANEARR 1276
            AFLN+VP KMSE DFW KY +AEY+HSTKN              AVFLK D+IL NEAR+
Sbjct: 213  AFLNFVPSKMSEVDFWNKYFKAEYIHSTKNTIAAAAEAAEDEDLAVFLKDDEILENEARK 272

Query: 1275 KIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHAAVV 1096
            K+R+VDPTLDMEADQGDDYTHLPDHGI RDG+KE +E+Q  +  Y+R LLQDLNR + VV
Sbjct: 273  KVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKETAEAQNTF--YRRTLLQDLNRQSEVV 330

Query: 1095 LEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAPCDP 916
            LEG++LD+++   RTVAE LA+ KQ       S+    +ER NR+ +MT++EDLQA  D 
Sbjct: 331  LEGKTLDMDMEHPRTVAEVLARRKQ------ESDGVIEEERRNRISKMTQIEDLQAQDDH 384

Query: 915  PLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKCVGL 736
              APLCIKDPRDYF SQQ NALK+L ++  G + + C++ +++AY  +RES+  IK +GL
Sbjct: 385  RFAPLCIKDPRDYFDSQQVNALKSLDDSLAGKEQIRCNLGSEEAYGSLRESISKIKAIGL 444

Query: 735  QTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQELLK 556
               ++ PEVA KVLN LT NISSTK +LG++S+E+VLD  P+ TKE+LL+HW   QELL+
Sbjct: 445  MDPLLSPEVAFKVLNGLTKNISSTKSHLGKSSQESVLDILPNTTKEKLLDHWVCSQELLR 504

Query: 555  HFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQALDEA 376
            HFWSSYP+TTQ+L  K  R+KDA+ QIY KL+EIK S +SDLRHQ+SL+V PM QALD A
Sbjct: 505  HFWSSYPVTTQNLVNKTKRMKDAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQALDAA 564

Query: 375  FVHYERDLEKRMKPKSKPNGTI 310
             +HY+ D+ KR    +KPNG +
Sbjct: 565  LLHYDADVRKRNARGTKPNGYV 586


>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
            gi|557089185|gb|ESQ29893.1| hypothetical protein
            EUTSA_v10011333mg [Eutrema salsugineum]
          Length = 597

 Score =  563 bits (1450), Expect = e-157
 Identities = 301/511 (58%), Positives = 366/511 (71%), Gaps = 8/511 (1%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKD--SEEPAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDE 1645
            F+ KAL K  +V KK   S    QLS  E+E R K+L+E+SEL +LH Q V  K+LTEDE
Sbjct: 95   FITKALAKCEEVPKKSAVSTSTEQLSIAELELRFKVLRENSELQRLHKQFVESKVLTEDE 154

Query: 1644 FWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPA 1465
            FWATRKKLL   +   S Q+ G KS M+S IKP TDGRTN+VTF+LT EII QIFAEKPA
Sbjct: 155  FWATRKKLLGQVSTGKSKQQVGLKSMMVSGIKPSTDGRTNRVTFNLTSEIIFQIFAEKPA 214

Query: 1464 VHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANE 1285
            V QAF+NYVP KM+EKDFWTKY RAEYL+STKN              AVFLK D+ILA E
Sbjct: 215  VRQAFINYVPSKMTEKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARE 274

Query: 1284 ARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHA 1105
             R+KIR+VDPTLDMEADQGDDY+HL DHGI RDGTK++ ESQ   DQ++R+LLQDLNRH+
Sbjct: 275  TRQKIRRVDPTLDMEADQGDDYSHLMDHGIQRDGTKDVVESQN--DQFRRSLLQDLNRHS 332

Query: 1104 AVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAP 925
            AVVLEGRS+DVE  DTR VAEAL +AKQV  A+  +  + NQ+RL R+ R  E+EDLQAP
Sbjct: 333  AVVLEGRSIDVESEDTRVVAEALTRAKQVSKADGETTKDANQDRLERMSRTAEMEDLQAP 392

Query: 924  CDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKC 745
             + PLAPL IKDPRDYF SQQ N L        GA + N H    +AY  ++ES+ +I+ 
Sbjct: 393  QNFPLAPLSIKDPRDYFESQQGNVLNE--PRGAGALNRNVH----EAYGLLKESILEIRT 446

Query: 744  VGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQE 565
             GL   +IK EV+ +V +SLT  IS+ K  +G+N RE+ LD  P  TK+E+L+HWTSIQE
Sbjct: 447  KGLSYPLIKSEVSFEVFSSLTQTISTAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQE 506

Query: 564  LLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQAL 385
            LL+HFWSSYPITT +L  KV +LKDAM   Y +L  +K+SVQSDLRHQ+SLLV+PM QAL
Sbjct: 507  LLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSQLDAMKQSVQSDLRHQVSLLVRPMQQAL 566

Query: 384  DEAFVHYERDLEKRM------KPKSKPNGTI 310
            D AF HYE DL++R           +PNG +
Sbjct: 567  DAAFQHYETDLQRRTAKSVGGSSSERPNGGV 597


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
            gi|482575779|gb|EOA39966.1| hypothetical protein
            CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score =  562 bits (1449), Expect = e-157
 Identities = 301/508 (59%), Positives = 369/508 (72%), Gaps = 5/508 (0%)
 Frame = -3

Query: 1818 FVGKALEKHPDVSKKDSEEPA--QLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDE 1645
            F+ KAL K  +   K +   +  QLS RE+E R KLL+E+SEL +LH Q V  K+LTEDE
Sbjct: 94   FITKALAKCEEEPNKPAVPASTEQLSIRELELRFKLLKENSELQRLHKQFVESKVLTEDE 153

Query: 1644 FWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPA 1465
            FWATRKKLL   + R S Q+ G KS M+S IKP TDGRTN+VTF+LTPEII QIFAEKPA
Sbjct: 154  FWATRKKLLGKDSIRKSKQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPA 213

Query: 1464 VHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANE 1285
            V QAF++YVP KM+EKDFWTKY RAEYL+STKN              AVFLK D+ILA E
Sbjct: 214  VRQAFISYVPSKMTEKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARE 273

Query: 1284 ARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHA 1105
             R+KIR+VDPTLDMEAD+GDDYTHL DHGI RDGT+++ E Q   +Q+KR+LLQDLNRHA
Sbjct: 274  TRQKIRRVDPTLDMEADEGDDYTHLMDHGIQRDGTRDVVEPQN--EQFKRSLLQDLNRHA 331

Query: 1104 AVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAP 925
            AVVLEGRS+DV+  DTR VAEAL + KQV  A+  +  + NQERL R+ R+  +EDLQAP
Sbjct: 332  AVVLEGRSIDVDSEDTRIVAEALTRVKQVSKADGETGKDANQERLERMSRVAGMEDLQAP 391

Query: 924  CDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKC 745
             + PLAPL IKDPRDYF SQQ N L        G K +  +V   +A+  ++ES+ +I+ 
Sbjct: 392  QNFPLAPLSIKDPRDYFESQQGNVLNA----PRGTKGLKRNV--HEAFGLLKESIVEIRA 445

Query: 744  VGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQE 565
             GL   +IKPEV+ +V +SLT  IS+ K  +G+N RE+ LD  P  TK+E+L+HWTSIQE
Sbjct: 446  RGLSDPLIKPEVSFEVFSSLTRTISTAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQE 505

Query: 564  LLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQAL 385
            LL+HFWSSYPITT +L  KV +LKDAM   Y KL+ +KESVQSDLRHQISLLV+PM QAL
Sbjct: 506  LLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQISLLVRPMQQAL 565

Query: 384  DEAFVHYERDLEKRMKPKS---KPNGTI 310
            D AF HYE DL++R    S   +PNG +
Sbjct: 566  DAAFQHYEADLQRRTAKSSGGERPNGYV 593


>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Oryza brachyantha]
          Length = 621

 Score =  561 bits (1446), Expect = e-157
 Identities = 300/506 (59%), Positives = 361/506 (71%), Gaps = 5/506 (0%)
 Frame = -3

Query: 1818 FVGKALEKH-----PDVSKKDSEEPAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILT 1654
            FV + L K      P  +   S +P QLS  EM+RR+KLL EDSEL KLH +LVIG IL 
Sbjct: 118  FVARVLGKQQGTIPPPENSVTSTDPEQLSAAEMQRRMKLLHEDSELQKLHRKLVIGNILQ 177

Query: 1653 EDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAE 1474
            E EFWATRK LLD   N+ S QR GFKSAM++D++P  DGRTNKVTFSLT EIIHQIFAE
Sbjct: 178  ESEFWATRKNLLDDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAE 237

Query: 1473 KPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDIL 1294
            KPAVH+AFLN+VPKKMSEKDFWTKY RAEYL  TKN              AVFLK DDIL
Sbjct: 238  KPAVHRAFLNFVPKKMSEKDFWTKYFRAEYLLRTKNTVAAAAEAAEDEELAVFLKNDDIL 297

Query: 1293 ANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLN 1114
            A EAR KI++VDPTLDMEAD GDDY HLPDHGI RDG+KE  E+    +  +R L QDLN
Sbjct: 298  AKEARLKIKRVDPTLDMEADAGDDYIHLPDHGIIRDGSKETIENDG--ELARRTLSQDLN 355

Query: 1113 RHAAVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDL 934
            RHAAVVLEGRS DVE+ DT+TVAEALA++K+    +  S+ + + ERL +V RMTE+EDL
Sbjct: 356  RHAAVVLEGRSSDVELTDTKTVAEALARSKREPPPSSISD-DTSHERLVKVARMTEIEDL 414

Query: 933  QAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFD 754
            QAP   P APLCIKDPR+YF SQQANAL++LG N  G  + NC +S  DA+ ++   +  
Sbjct: 415  QAPRSVPYAPLCIKDPREYFDSQQANALRSLGGNNDGRHARNCRLSAHDAFDHLLGQISS 474

Query: 753  IKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTS 574
            IK  GL   +++ +VA KVLN L   IS T+    +N ++++L   P  T++EL++HWT+
Sbjct: 475  IKVNGLNYPVVQSDVAFKVLNELNDGISRTRRLNLKNPQDSLLGQIPRHTRDELMDHWTA 534

Query: 573  IQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPML 394
            IQELL+HFWSSYPITT  L  KV R+KDAM QIY KLQ IKES Q D+RH+IS LV+PM 
Sbjct: 535  IQELLRHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQNIKESAQPDVRHEISQLVKPMT 594

Query: 393  QALDEAFVHYERDLEKRMKPKSKPNG 316
            QALD AF H     +K  K  +KPNG
Sbjct: 595  QALDAAFNHELEQQQKSSKSGNKPNG 620


>gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
          Length = 588

 Score =  559 bits (1441), Expect = e-156
 Identities = 295/504 (58%), Positives = 368/504 (73%), Gaps = 2/504 (0%)
 Frame = -3

Query: 1815 VGKALEKHP--DVSKKDSEEPAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILTEDEF 1642
            VG AL KH   + +K  SEE  QLS+ EM  RIKLLQEDS+L +LH +LV    LTE EF
Sbjct: 94   VGIALSKHVQGEATKVISEE--QLSSAEMTLRIKLLQEDSKLQRLHKELVASGKLTESEF 151

Query: 1641 WATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAEKPAV 1462
            WAT+KKLLD   +R   QR GFK+++I D KP++DGR N+V F LTPEI +QIF  KPAV
Sbjct: 152  WATKKKLLDQDESRKLKQRIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFTLKPAV 211

Query: 1461 HQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDILANEA 1282
            HQAFLN+VP KM+E DFW KY +AEYLHSTKN              AVFLK D+IL  EA
Sbjct: 212  HQAFLNFVPSKMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEA 271

Query: 1281 RRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLNRHAA 1102
            R+K+R+VDPTLDMEADQGDDYTHLPDHGI RDG+KEISE+Q     YKR LLQDLNR  A
Sbjct: 272  RKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKEISEAQN--SLYKRTLLQDLNRQGA 329

Query: 1101 VVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMTELEDLQAPC 922
            VVLEG++LD+E+ + RTVAE LA+ KQ     E+ E   ++ER NR+ +MT +EDLQ+  
Sbjct: 330  VVLEGKTLDMEMENPRTVAEILARRKQ-----ESDEVVGDEERRNRISKMTPIEDLQSQD 384

Query: 921  DPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESLFDIKCV 742
            D   APLCIKDPRDYF  QQANA+KTL ++  G + M C + +++AY  +R S+  I+  
Sbjct: 385  DHRYAPLCIKDPRDYFDFQQANAVKTLDDSQPGMEQMMCSLGSEEAYGSLRASISKIQTT 444

Query: 741  GLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHWTSIQEL 562
            GL+  +  PEVA+KVL+ LT NISS+KY+LG+ S+E+VLD  P+ TKE+LL+HW   QEL
Sbjct: 445  GLRDPLFSPEVALKVLHGLTKNISSSKYHLGKTSQESVLDILPNTTKEKLLDHWVCSQEL 504

Query: 561  LKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLLVQPMLQALD 382
            L+H+WSSYP+TTQ+L  K  RLKD++ QIY KL+EIK S QSDLRHQ+SL+V PM QALD
Sbjct: 505  LRHYWSSYPVTTQNLVNKTRRLKDSISQIYSKLEEIKVSAQSDLRHQVSLVVHPMQQALD 564

Query: 381  EAFVHYERDLEKRMKPKSKPNGTI 310
             A +HY+ D+ KR    SK NG +
Sbjct: 565  AALLHYDADIRKRNARGSKSNGYV 588


>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
            communis] gi|223529828|gb|EEF31761.1| TFIIH basal
            transcription factor complex subunit, putative [Ricinus
            communis]
          Length = 597

 Score =  558 bits (1437), Expect = e-156
 Identities = 297/510 (58%), Positives = 376/510 (73%), Gaps = 10/510 (1%)
 Frame = -3

Query: 1815 VGKALEK------HPDVSKKDSEEPAQLSTREMERRIKLLQEDSELGKLHMQLVIGKILT 1654
            VGKAL K       PD  +  S++P   ST E+  R+ LL+E+ EL KLH Q V  ++LT
Sbjct: 94   VGKALSKLGDTPKPPDAPEVPSDQP---STEELLLRMNLLRENLELQKLHKQFVSDRVLT 150

Query: 1653 EDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIHQIFAE 1474
            + EFWATRKKLL+G  +R S QR G KS M++D KPL DG+TNKVTF+LTPEI+ +IFAE
Sbjct: 151  DSEFWATRKKLLNGEFSRKSKQRVGLKSVMLADSKPLIDGQTNKVTFNLTPEIVREIFAE 210

Query: 1473 KPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLKQDDIL 1294
            KPAVHQA+L+ VP KMSE+DFWTKYCRAEYL  ++N              A+FLK DDIL
Sbjct: 211  KPAVHQAYLSLVPNKMSERDFWTKYCRAEYLQRSRNIHAAAAEAAEDEELALFLKPDDIL 270

Query: 1293 ANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNLLQDLN 1114
            A+E R+KIR VDPTLDMEADQGDDYTHLPDHGI RDG+K++ ESQ  ++ Y+R LLQDLN
Sbjct: 271  ASETRQKIRCVDPTLDMEADQGDDYTHLPDHGIVRDGSKDVIESQ--HEPYRRTLLQDLN 328

Query: 1113 RHAAVVLEGRSLDVE-IGDTRTVAEALAKAKQ-VELANETSEANNNQERLNRVCRMTELE 940
            RHAAVVLEG ++D E + DT+ VA+ALA++K+ ++  N  ++ N NQER NR+ +M E+E
Sbjct: 329  RHAAVVLEGTAIDDEQLQDTKAVADALARSKRGIKTINREADGNANQERSNRISQMMEIE 388

Query: 939  DLQAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMRESL 760
            DLQ   D  LAPLCIKDPRDYF SQQA+ALK   +   G ++  C +S+Q+AY  +R+S+
Sbjct: 389  DLQGSNDHHLAPLCIKDPRDYFDSQQASALKNSRDIPSGTEAARCSLSSQEAYASLRDSI 448

Query: 759  FDIKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELLNHW 580
               K +GL   I+KPE+A KVL+ LTHNISSTKY+LG+NSRE+VLD  P+  KEELL+HW
Sbjct: 449  TQTKAMGLNDPIVKPEIATKVLSILTHNISSTKYHLGKNSRESVLDRLPNTIKEELLHHW 508

Query: 579  TSIQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLR-HQISLLVQ 403
             SI+ELL+H+WSSYPITT +L  KV+RLKDAM +I  +LQE+KESVQSDL  H  SL + 
Sbjct: 509  MSIEELLRHYWSSYPITTAYLYAKVSRLKDAMSKIDSQLQEMKESVQSDLXFHATSLGIV 568

Query: 402  PMLQALDEAFVHYERDLEKR-MKPKSKPNG 316
            P   AL+ A  HY+ DL+KR  K   +PNG
Sbjct: 569  P---ALEAAMQHYDADLQKRSAKSAERPNG 595


>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
            gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
            Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
            [Oryza sativa Japonica Group]
            gi|215686948|dbj|BAG90767.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 604

 Score =  556 bits (1433), Expect = e-155
 Identities = 297/511 (58%), Positives = 364/511 (71%), Gaps = 10/511 (1%)
 Frame = -3

Query: 1818 FVGKALEKH----------PDVSKKDSEEPAQLSTREMERRIKLLQEDSELGKLHMQLVI 1669
            FV K L K           P  +   S    QLS  EM+RR+KLLQEDSEL KLHM+ V+
Sbjct: 96   FVAKVLGKQQGTIPPKPNVPPENSVTSTGEEQLSAAEMQRRMKLLQEDSELQKLHMKFVL 155

Query: 1668 GKILTEDEFWATRKKLLDGGNNRSSTQRAGFKSAMISDIKPLTDGRTNKVTFSLTPEIIH 1489
            G IL E EFWATRK LL+   N+ S QR GFKSAM++D++P  DGRTNKVTFSLT EIIH
Sbjct: 156  GNILQESEFWATRKNLLEDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIH 215

Query: 1488 QIFAEKPAVHQAFLNYVPKKMSEKDFWTKYCRAEYLHSTKNXXXXXXXXXXXXXXAVFLK 1309
            QIFAEKPAVH+AFL++VPKKMSEKDFWTKY RAEYL  TKN              A+FLK
Sbjct: 216  QIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLK 275

Query: 1308 QDDILANEARRKIRKVDPTLDMEADQGDDYTHLPDHGIPRDGTKEISESQTPYDQYKRNL 1129
             DDILA EAR KI++VDPTLDMEAD GDDY HLPDHGI RDG+KE  ++    +  +R L
Sbjct: 276  NDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHGIIRDGSKETIDNDG--ELARRTL 333

Query: 1128 LQDLNRHAAVVLEGRSLDVEIGDTRTVAEALAKAKQVELANETSEANNNQERLNRVCRMT 949
             QDLNRHAAVVLEGRS DVE+ DT+TVAEA+A++K+   ++  S+ + N ERL +V RMT
Sbjct: 334  SQDLNRHAAVVLEGRSSDVELTDTKTVAEAIARSKKEPPSSSISD-DTNHERLVKVARMT 392

Query: 948  ELEDLQAPCDPPLAPLCIKDPRDYFYSQQANALKTLGENAIGAKSMNCHVSTQDAYTYMR 769
            E+EDLQAP   P APLCIKDPR+YF SQQANAL++LG N  G  + NC +ST DA+ ++ 
Sbjct: 393  EIEDLQAPRSLPYAPLCIKDPREYFDSQQANALRSLGGNNDGRHARNCRLSTDDAFDHLL 452

Query: 768  ESLFDIKCVGLQTSIIKPEVAIKVLNSLTHNISSTKYNLGRNSRETVLDGFPSRTKEELL 589
              +  IK  GL   +I+ +VA+KVLN L   IS ++    +N ++++L   P RT++EL+
Sbjct: 453  GQISSIKVNGLNYPVIQSDVALKVLNELNEGISRSRRLNLKNPQDSLLGQIPRRTRDELM 512

Query: 588  NHWTSIQELLKHFWSSYPITTQHLSIKVNRLKDAMGQIYPKLQEIKESVQSDLRHQISLL 409
            +HW +IQELL+HFWSSYPITT  L  KV R+KDAM QIY KLQ+IKES Q D+RH+IS L
Sbjct: 513  DHWAAIQELLQHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQL 572

Query: 408  VQPMLQALDEAFVHYERDLEKRMKPKSKPNG 316
            V+PM QALD AF H     +K  K  +KPNG
Sbjct: 573  VKPMTQALDAAFNHDLEQQQKSSKSGNKPNG 603