BLASTX nr result
ID: Achyranthes22_contig00028899
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00028899
(1545 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li... 434 e-119
gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus... 431 e-118
gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao] 428 e-117
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4 [G... 427 e-117
emb|CBI32318.3| unnamed protein product [Vitis vinifera] 426 e-116
gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus pe... 426 e-116
gb|EXB39314.1| hypothetical protein L484_025009 [Morus notabilis] 425 e-116
ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-li... 420 e-115
ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-li... 413 e-112
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li... 412 e-112
ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t... 411 e-112
ref|XP_002303939.1| exonuclease family protein [Populus trichoca... 407 e-111
ref|NP_171835.1| ribosomal RNA processing protein 4 [Arabidopsis... 406 e-110
ref|XP_006444154.1| hypothetical protein CICLE_v10021133mg [Citr... 405 e-110
ref|XP_006305361.1| hypothetical protein CARUB_v10009740mg [Caps... 404 e-110
ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|2235359... 400 e-109
ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-li... 397 e-108
ref|XP_006418241.1| hypothetical protein EUTSA_v10008200mg [Eutr... 396 e-107
ref|XP_002889455.1| ATRRP4 [Arabidopsis lyrata subsp. lyrata] gi... 396 e-107
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li... 391 e-106
>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
Length = 330
Score = 434 bits (1115), Expect = e-119
Identities = 212/330 (64%), Positives = 270/330 (81%), Gaps = 1/330 (0%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR +LSLNQTQ++RL+ LE+L+SLSSKS SNAS+ VAD IP+NYE +LKGHGTL+LD
Sbjct: 1 MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+Y+R+LR+RYKPETGDI+VGRV E+A KRW++DIN +QDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IFEEND++ AEVR QHDG+ L ARS KYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
Q++++ YLVK++KQH H ++E+GV LILG NG++WVGE +EA + D ++Q N
Sbjct: 181 QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNT 240
Query: 963 -NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNI 1139
+S + S+E E+ YT LETRQ ICRIANAVRVL+ LGF +TVE+IK V LS+SLN+
Sbjct: 241 KSSSSTFMSLEEQERTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNL 300
Query: 1140 DIHDMLGAEFCVMVAEKEADRRSTINRRKG 1229
DIH+MLG+EF V+VAE EA R+S ++KG
Sbjct: 301 DIHEMLGSEFYVLVAEGEATRKSMFTKKKG 330
>gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus vulgaris]
Length = 325
Score = 431 bits (1107), Expect = e-118
Identities = 217/328 (66%), Positives = 272/328 (82%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR I+L L+QTQ+VRL+ TLE+L+SLSSK S+AS+ +AD IP+N+E +LKGHGT +L+
Sbjct: 1 MRRIQLPLSQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLN 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+AT+CGVVERV+KL+YVRSLRSRYKPE GDI++GRV+EVAQKRW++DIN NQDAVLM
Sbjct: 61 GEVVATVCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINFNQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ +PDG+QRRRT +DELNMR IFEENDV+ AEVR QHDG L ARS KYGKL RG
Sbjct: 121 LSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAEVRGFQHDGL-HLQARSRKYGKLNRG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL+SVP YLVK+QKQHFH ++E+G+ LI+G NG++WVGE IEA D M D V SD
Sbjct: 180 QLLSVPPYLVKRQKQHFHHLEEFGIDLIIGCNGFIWVGEHIEAKDDMVEDQVSQSDPQVL 239
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S+E E+NYT LETR+ ICR ANAVRVLSIL F++T+EIIK I++LS S+N+D
Sbjct: 240 LHNS--VSLEEQERNYTILETRKYICRAANAVRVLSILSFNMTLEIIKGIIDLSLSMNLD 297
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
IH+MLG+EFCV+VAEKEA+RRS+ N++K
Sbjct: 298 IHEMLGSEFCVLVAEKEAERRSS-NKKK 324
>gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]
Length = 319
Score = 428 bits (1101), Expect = e-117
Identities = 212/328 (64%), Positives = 266/328 (81%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR ++L LNQTQR+RL+ LEKL SLSSK+ S+AS+TVAD IP+NY+ LKGHGT EL+
Sbjct: 1 MRGLQLPLNQTQRIRLQRALEKLHSLSSKANSDASVTVADTIPVNYDDAFLKGHGTTELN 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+++AT+CGVVERV+KL+YVR+LR+RYKPE GDI+VGRV+EVAQKRW+++IN +QDAVLM
Sbjct: 61 GELVATVCGVVERVNKLVYVRALRARYKPEVGDIVVGRVVEVAQKRWRLEINFSQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ +PDGIQRRRT +DELNMR+IFEENDV+ AEVRN HDG+ QL ARS KYGKLE+G
Sbjct: 121 LSSMNMPDGIQRRRTALDELNMRSIFEENDVVCAEVRNFHHDGSVQLQARSQKYGKLEKG 180
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL+ + YLVKK KQHFH ++++G+ LILGRNG++WVGE +EA D M VD NS+QS
Sbjct: 181 QLLIIDPYLVKKSKQHFHYLEQFGIDLILGRNGFIWVGEHVEARDGMIVDQANNSEQSTV 240
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
+Q YT LE RQ ICRIANAVRVLS LGF++ ++I ELS+SLNID
Sbjct: 241 E----------KDQAYTPLEMRQNICRIANAVRVLSTLGFNVDADLIIETAELSSSLNID 290
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
IHDMLG+EF V+VAE+EA+RRS + +RK
Sbjct: 291 IHDMLGSEFHVLVAEREAERRSLMTKRK 318
>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4 [Glycine max]
Length = 327
Score = 427 bits (1099), Expect = e-117
Identities = 212/328 (64%), Positives = 270/328 (82%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MREI+L L+QTQ+VRL+ LE+L+SLS+K S+AS+ +AD I +N+E +LKGHGT +L+
Sbjct: 1 MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLN 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+YVR+LRSRYKPE GDI++GRV+EVAQKRW+++IN NQDAVL+
Sbjct: 61 GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLL 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ +PDG+QRRRT +DELNMR IFEENDV+ AEVR QHDG L ARS KYGKL RG
Sbjct: 121 LSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDGL-HLQARSRKYGKLNRG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL++VP YLVK+QKQHFH ++E+G+ LILG NG++WVGE +EA D M D V SD
Sbjct: 180 QLLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVL 239
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S+E E+NYT LETR+ I R ANAVRVLS LGF+IT+EIIK I++LS S+N+D
Sbjct: 240 FPNKNCVSLEEQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLSMNLD 299
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
IHDMLG+EFCV+VAEKEA+RRS++ +R+
Sbjct: 300 IHDMLGSEFCVLVAEKEAERRSSMKKRR 327
>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 426 bits (1095), Expect = e-116
Identities = 209/329 (63%), Positives = 266/329 (80%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR +LSLNQTQ++RL+ LE+L+SLSSKS SNAS+ VAD IP+NYE +LKGHGTL+LD
Sbjct: 1 MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+Y+R+LR+RYKPETGDI+VGRV E+A KRW++DIN +QDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IFEEND++ AEVR QHDG+ L ARS KYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
Q++++ YLVK++KQH H ++E+GV LILG NG++WVGE +EA + D ++Q N
Sbjct: 181 QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNT 240
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S +++ YT LETRQ ICRIANAVRVL+ LGF +TVE+IK V LS+SLN+D
Sbjct: 241 KS---------SKRTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNLD 291
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRKG 1229
IH+MLG+EF V+VAE EA R+S ++KG
Sbjct: 292 IHEMLGSEFYVLVAEGEATRKSMFTKKKG 320
>gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus persica]
Length = 326
Score = 426 bits (1094), Expect = e-116
Identities = 211/327 (64%), Positives = 265/327 (81%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MRE++LSLNQTQ+VRL+ LEKL+SLSSK+ SNAS+TVAD IP+NYE +LKGHGT E +
Sbjct: 1 MRELQLSLNQTQKVRLQRALEKLESLSSKANSNASVTVADSIPVNYEDGLLKGHGTSEFN 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+AT+CG+VERV+KL+YVR+LR+RYKPE GDI+VGRV+EVA KRW+V+IN + DAVLM
Sbjct: 61 GEVVATVCGIVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IFEENDVI AEVR QHDG L ARS KYGKL RG
Sbjct: 121 LSSMNLPDGIQRRRTALDELNMRSIFEENDVICAEVRGFQHDGL-HLQARSQKYGKLGRG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL++VP YLVK++KQHFH ++ YG+ LI+G NG++WVGE ++ D M VD V S+Q +A
Sbjct: 180 QLLTVPPYLVKRRKQHFHHLENYGIDLIIGCNGFIWVGEHVQVTDDMVVDQVNKSEQDDA 239
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S E +NYT ETR+ ICR ANA+RVLS LGF+ITVE+I V+LSTS+N+
Sbjct: 240 KPDENSISPEDQGKNYTRQETRENICRAANAIRVLSTLGFNITVEVITETVDLSTSINVA 299
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRR 1223
IH+MLG+EF V+VAEKE+ RRS ++
Sbjct: 300 IHEMLGSEFYVLVAEKESVRRSMTKKK 326
>gb|EXB39314.1| hypothetical protein L484_025009 [Morus notabilis]
Length = 331
Score = 425 bits (1092), Expect = e-116
Identities = 210/328 (64%), Positives = 270/328 (82%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR +LSLNQTQ+VRL+ LE+L+SLSSK SNAS+TVAD IP+NYE +LKGHGT EL+
Sbjct: 5 MRGTQLSLNQTQKVRLQRALEQLESLSSKVNSNASVTVADSIPVNYEDGVLKGHGTSELN 64
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+AT+CGVVERV+KL+YVR+LR+RYKPE GDI+VGRV+ VA KRW+++IN +QDAVLM
Sbjct: 65 GEVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVVVVAPKRWRIEINYSQDAVLM 124
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IFEENDVI AEVR QHDG L ARS KYGKL+RG
Sbjct: 125 LSSMNLPDGIQRRRTALDELNMRSIFEENDVICAEVRGFQHDGL-HLQARSQKYGKLKRG 183
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
Q++++P YLVK++KQHFH ++++G+ LILG NG++WVGE +EA D M + V ++Q
Sbjct: 184 QMLTIPPYLVKRRKQHFHHLEQFGIDLILGCNGFIWVGEHVEATDDMLEEQVNKTEQQIT 243
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S S+E EQ+ LETRQ++CR ANAVRVLS LGF +T+E+I V LS+SLN+D
Sbjct: 244 KSDRNSASLEEQEQSSIPLETRQSLCRTANAVRVLSTLGFIVTIEVILETVNLSSSLNLD 303
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
+H+MLG+EFCV+VAEKEA+RR T+N++K
Sbjct: 304 VHEMLGSEFCVLVAEKEAERR-TLNKKK 330
>ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-like [Cicer arietinum]
Length = 327
Score = 420 bits (1080), Expect = e-115
Identities = 212/328 (64%), Positives = 265/328 (80%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR I+L L+QTQ+VRL+ LE+L+SLSSK S+AS+T+AD IP+N+E +LKGHGT +L+
Sbjct: 1 MRGIQLQLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTTDLN 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+YVRSLRSRYKPE GDI++GRV+EVAQKRW++DIN +Q+A LM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQNAYLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LS++ +PDG+QRRRT +DELNMR IFEE DVI AEVR QHDG L ARS KYGKL G
Sbjct: 121 LSAMNMPDGVQRRRTALDELNMRCIFEEMDVICAEVRGFQHDGL-HLQARSQKYGKLSTG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL++VP YLVK+QKQHFH +++YG+ LI+G NG++WVGE +EA D M D V +D
Sbjct: 180 QLLTVPPYLVKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEARDDMVEDQVNQTDPQVL 239
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S E E+NYT LETR+ ICR ANAVRVLS LGF IT+EIIK + ELS S N+D
Sbjct: 240 IPNKDSVSFEEQEKNYTALETRKYICRAANAVRVLSSLGFIITLEIIKGVFELSLSSNLD 299
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
IHDMLG+EFCV+VAEKEA+RRS+ N++K
Sbjct: 300 IHDMLGSEFCVLVAEKEAERRSS-NKKK 326
>ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-like [Fragaria vesca subsp.
vesca]
Length = 328
Score = 413 bits (1061), Expect = e-112
Identities = 211/329 (64%), Positives = 261/329 (79%), Gaps = 2/329 (0%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR +++SLNQTQ+VRL+ LEKL+SLSSK SNAS+ VAD IP+N+E +LKGHGT E++
Sbjct: 1 MRGLQVSLNQTQKVRLQRALEKLESLSSKPNSNASVIVADSIPVNHEDGLLKGHGTSEVN 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+AT+CGVVERV+KL+YVRSLR+RYKPE GDI+VGRV+EVA KRW+V+IN + DAVLM
Sbjct: 61 GEVVATVCGVVERVNKLVYVRSLRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR IFEENDVI AEVR Q+DG L ARS KYGKL RG
Sbjct: 121 LSSMNLPDGIQRRRTALDELNMRTIFEENDVICAEVRGFQYDGL-HLQARSQKYGKLGRG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
Q+++VP YLVK++KQHFH + +YG+ LILG NG++WVGE +E D M VD V NS+Q +A
Sbjct: 180 QMLTVPPYLVKRRKQHFHNLDKYGIDLILGCNGFIWVGEHVEITDDMVVDQVNNSEQQSA 239
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSL--N 1136
S S E E++YT ETR+ I R ANA+RVLS LGF+IT E+I VELS SL
Sbjct: 240 KSDKKILSPEEQERSYTPQETRENIVRTANAIRVLSALGFNITAEVIMDTVELSISLKQQ 299
Query: 1137 IDIHDMLGAEFCVMVAEKEADRRSTINRR 1223
+ I+ MLGAEFCV+VAEKEA RRS ++
Sbjct: 300 VPIYKMLGAEFCVLVAEKEAARRSVTKKK 328
>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
Length = 327
Score = 412 bits (1060), Expect = e-112
Identities = 210/329 (63%), Positives = 264/329 (80%), Gaps = 2/329 (0%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
M+ ++LSLN TQ++RLE E+L+SLSSK S+AS+ VAD IPLNYE +LKGHGTL+L+
Sbjct: 1 MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+A++CGVVERV+KLIYVR+LR+RYKPE GDI+VGRV EVA KRW++DIN QDAVLM
Sbjct: 61 GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IFEENDVI AEVR LQHDG L ARS KYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGL-HLQARSQKYGKLERG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEAN--DTMEVDTVKNSDQS 956
QL++V YL+K++KQHFH +++YG+ LILG NG++W+GE ++ DTM D V +Q
Sbjct: 180 QLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQK 239
Query: 957 NANSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLN 1136
+ G + + +V E YT LETRQ ICR ANA+RVLS LGF +TVE+I IV LS SLN
Sbjct: 240 GSKFEGTFGN-QVQEV-YTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLN 297
Query: 1137 IDIHDMLGAEFCVMVAEKEADRRSTINRR 1223
ID+H+MLG+EFCV+ AEKE +RRS+ +R
Sbjct: 298 IDVHEMLGSEFCVLTAEKEVERRSSSKKR 326
>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
gi|217074186|gb|ACJ85453.1| unknown [Medicago truncatula]
gi|355510788|gb|AES91930.1| Exosome complex exonuclease
RRP4 [Medicago truncatula] gi|388516977|gb|AFK46550.1|
unknown [Medicago truncatula]
Length = 327
Score = 411 bits (1057), Expect = e-112
Identities = 206/328 (62%), Positives = 260/328 (79%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR I L L+QTQ++RL+ LE L+SLSSK S++S+T+AD IP+N+E +LKGHGT +LD
Sbjct: 1 MRGIHLQLSQTQKLRLQKALEHLESLSSKVNSDSSVTIADSIPVNHEDGVLKGHGTADLD 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+YVR+LRSRYKPE GDI++GRV+EVAQKRW++DIN +Q+A LM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVIEVAQKRWRLDINYSQNAYLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LS++ +PDG+QRRRT +DELNMR IFEE DVI AEVR QHDG L ARS KYGKL G
Sbjct: 121 LSAMNMPDGVQRRRTALDELNMRCIFEEADVICAEVRGFQHDGL-HLQARSQKYGKLSTG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL++V YLVK+QKQHFH +++YG+ LI+G NG++WVGE +E D M D V SD
Sbjct: 180 QLLTVTPYLVKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEVRDDMVEDQVNQSDPQVL 239
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S+E E+ YT LETR+ ICR ANAVR LS LGF IT EIIK +++LS S N+D
Sbjct: 240 TPNKNSVSLEEQEKKYTALETRKYICRAANAVRGLSTLGFIITSEIIKGVIDLSLSANLD 299
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
IHDMLG+EFCV+VAEKEA+RRS+ N++K
Sbjct: 300 IHDMLGSEFCVLVAEKEAERRSS-NKKK 326
>ref|XP_002303939.1| exonuclease family protein [Populus trichocarpa]
gi|222841371|gb|EEE78918.1| exonuclease family protein
[Populus trichocarpa]
Length = 320
Score = 407 bits (1047), Expect = e-111
Identities = 201/329 (61%), Positives = 266/329 (80%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR IE+SLNQTQ++RL+ L++L+SL ++ NAS+TVAD IP++ E ILKGHGT E D
Sbjct: 1 MRGIEISLNQTQKIRLQRALKQLESLYLRANFNASVTVADTIPVSNEDTILKGHGTSERD 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+YVR+LR+RYKPE GDI+VGRV+EVAQKRWK++IN +QDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIIVGRVVEVAQKRWKLEINFSQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDG+QRRRT +DELNMR+IFEENDV+ EVRN Q+DG QL ARS KYGKLE+G
Sbjct: 121 LSSMNLPDGLQRRRTALDELNMRSIFEENDVVCGEVRNFQNDGGIQLQARSQKYGKLEKG 180
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL+++P YLVK+QK HFH +++YGV LILG NG++WVGE +EA D + D + N++Q
Sbjct: 181 QLLTIPPYLVKRQKHHFHHLEQYGVDLILGCNGFIWVGEHVEARDCIVEDQLNNTEQQFT 240
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
S N LETR++IC+IANA+RVLSILGF++T+E+I ++LS++LN+
Sbjct: 241 KS---------NTTKEMPLETRRSICQIANAIRVLSILGFNVTLEVILETIDLSSTLNLG 291
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRKG 1229
I +MLG EF V+VAE+EA+RR+++ +RKG
Sbjct: 292 IDEMLGPEFHVLVAEREAERRTSMTKRKG 320
>ref|NP_171835.1| ribosomal RNA processing protein 4 [Arabidopsis thaliana]
gi|3850568|gb|AAC72108.1| Similar to hypothetical protein
SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe
cosmid gb|Z50142 [Arabidopsis thaliana]
gi|34365689|gb|AAQ65156.1| At1g03360 [Arabidopsis
thaliana] gi|51970606|dbj|BAD43995.1| hypothetical
protein [Arabidopsis thaliana]
gi|332189442|gb|AEE27563.1| ribosomal RNA processing
protein 4 [Arabidopsis thaliana]
Length = 322
Score = 406 bits (1044), Expect = e-110
Identities = 199/327 (60%), Positives = 258/327 (78%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR+++L L+QTQ+VR E +E+LQSLSS + S+AS+ V D IP+N++ LKGHGT E+D
Sbjct: 3 MRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+++AT+CGVVERVDKL+YVR+LR+RYKPE GDI+VGRV+EVAQKRW+V++N NQD VLM
Sbjct: 63 GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLM 122
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ +PDGIQRRRT +DELNMRNIF E+DV+ AEVRN QHDG+ QL ARS KYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL+ V YLVK+ K HFH ++ G+ LI+G NG++WVGE +E D M +D K+ + ++
Sbjct: 183 QLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDDQKDEEMISS 242
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
+S G EQ++ LETRQTICRI NA+RVLS LGF +T+E+I V LS S NID
Sbjct: 243 SSTG-------KEQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNID 295
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRR 1223
IHDMLG+EF V+VAE EA+RR T ++
Sbjct: 296 IHDMLGSEFHVVVAENEAERRRTKRKK 322
>ref|XP_006444154.1| hypothetical protein CICLE_v10021133mg [Citrus clementina]
gi|568852241|ref|XP_006479788.1| PREDICTED: exosome
complex component RRP4-like [Citrus sinensis]
gi|557546416|gb|ESR57394.1| hypothetical protein
CICLE_v10021133mg [Citrus clementina]
Length = 327
Score = 405 bits (1041), Expect = e-110
Identities = 203/328 (61%), Positives = 257/328 (78%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR ++LS NQTQ+VRLE LE+L+SLSSKS N+ +TV D IP+ YE ILKGHGT +
Sbjct: 1 MRNLQLSFNQTQKVRLEKALERLESLSSKSNPNSCVTVGDTIPV-YEDGILKGHGTSDQK 59
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G++ AT+CGVVER++KLIYVR+LR+RYKPETGDI++GRV+EV KRWK++IN QDA+LM
Sbjct: 60 GELAATVCGVVERINKLIYVRALRARYKPETGDIVIGRVIEVVPKRWKLEINFTQDAILM 119
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IF END++ AEVR+ Q DG+ QL AR+ KYGKLERG
Sbjct: 120 LSSMNLPDGIQRRRTAVDELNMRSIFTENDLVCAEVRSSQGDGSLQLQARNQKYGKLERG 179
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL++V YLVK++KQHFH ++EYG+ LI+G NGY+W+GE +EA D M VD NS+Q A
Sbjct: 180 QLLTVDPYLVKRRKQHFHHLEEYGIDLIIGCNGYIWIGEHVEARDKMVVDQGSNSEQLIA 239
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
++ + T E RQ ICRIANA+RVLS LGF+ITVE+I V LS SLN+D
Sbjct: 240 KCDKNSMDLDEQDGTCTPREARQNICRIANAIRVLSRLGFNITVEVILETVNLSNSLNLD 299
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
IHDMLG+EF V+VAE EA+RRS R++
Sbjct: 300 IHDMLGSEFYVLVAESEAERRSLSKRKR 327
>ref|XP_006305361.1| hypothetical protein CARUB_v10009740mg [Capsella rubella]
gi|482574072|gb|EOA38259.1| hypothetical protein
CARUB_v10009740mg [Capsella rubella]
Length = 324
Score = 404 bits (1038), Expect = e-110
Identities = 203/328 (61%), Positives = 258/328 (78%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR+++L L+QTQ+VR E +E+LQSLSS + S+AS+ V D IP+N++ LKGHGT E+D
Sbjct: 3 MRKLQLPLSQTQKVRFERAIERLQSLSSTANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+++AT+CGVVERVDKL+YVR+LR+RYKPE GDI+VGRV+EVAQKRW+V++N NQD VLM
Sbjct: 63 GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLM 122
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ +PDGIQRRRT +DELNMRNIF E+DV+ AEVRN QHDG+ QL ARS KYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL+ V YLVK+ K HFH ++ G+ LI+G NG +WVGE +E D M +D K+ + ++
Sbjct: 183 QLLKVDPYLVKRSKHHFHYIESLGIDLIIGCNGLIWVGEHVEVRDPMAIDDQKDGEMISS 242
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
+ T EQ++T LETRQTICRI NA+RVLS LGF +T+EII V LS S NID
Sbjct: 243 S-----TESTGKEQSHTLLETRQTICRIGNAIRVLSNLGFTVTLEIIMETVNLSNSKNID 297
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRRK 1226
IHDMLG+EF V+VAE EA+RR T RRK
Sbjct: 298 IHDMLGSEFHVVVAENEAERRRT--RRK 323
>ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|223535983|gb|EEF37642.1| rrp4,
putative [Ricinus communis]
Length = 322
Score = 400 bits (1029), Expect = e-109
Identities = 204/329 (62%), Positives = 260/329 (79%), Gaps = 1/329 (0%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEH-DILKGHGTLEL 419
MREI+L LNQTQ++RL+ L++L+SL SK S+AS+TVAD IP++ E +ILKGHGT E
Sbjct: 1 MREIQLPLNQTQKIRLQRALQQLESLHSKVHSDASVTVADTIPISLEDGNILKGHGTAER 60
Query: 420 DGQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVL 599
DG+V+AT CGVVERV+ L+YVRSLRSRYKPE GDI+VGRV+EVAQKRWK++IN +QDAVL
Sbjct: 61 DGEVVATTCGVVERVNMLVYVRSLRSRYKPEVGDIIVGRVIEVAQKRWKLEINFSQDAVL 120
Query: 600 MLSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLER 779
MLSS+ LPDGIQRRRT +DELNMRN+FEENDV+ AEVRN Q+DG+ QL ARS KYGKLE+
Sbjct: 121 MLSSMNLPDGIQRRRTALDELNMRNVFEENDVVCAEVRNFQNDGSLQLQARSQKYGKLEK 180
Query: 780 GQLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSN 959
GQL++V YLVK+QKQHFH + +Y V LILG NG++WVGE ++A D+M D V ++ +
Sbjct: 181 GQLLTVSPYLVKRQKQHFHHLVQYDVDLILGCNGFIWVGEHVDARDSMVEDQVNETEDQD 240
Query: 960 ANSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNI 1139
S + V LETR+ ICRIANAVRVLS LGF +T+E+I LS++LN+
Sbjct: 241 TKSNKTFEEVP--------LETRRNICRIANAVRVLSTLGFSLTLEVILETFSLSSTLNL 292
Query: 1140 DIHDMLGAEFCVMVAEKEADRRSTINRRK 1226
I +M G EF V+VAEKEA+RRS++ ++K
Sbjct: 293 GIDEMPGPEFHVLVAEKEAERRSSLTKKK 321
>ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-like [Setaria italica]
Length = 319
Score = 397 bits (1021), Expect = e-108
Identities = 201/330 (60%), Positives = 259/330 (78%), Gaps = 2/330 (0%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR++ LSLNQTQRVRLE L +LQSL+ + S A++TVAD IP+N E +ILKGHGT + D
Sbjct: 1 MRDLHLSLNQTQRVRLEAALHELQSLTPAAASAAAVTVADTIPVNQEDNILKGHGTSDQD 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+YVR+LR+RYKPE GDI+VGRV+E+A KRW+++IN +QDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IFEENDVI AEVR QHDG+ L ARS+KYGKLERG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSEKYGKLERG 180
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEV--DTVKNSDQS 956
QL++VP YLVK++KQHFH + +Y V LILG NG++WVGE + ++ ++ D K+SD++
Sbjct: 181 QLLTVPPYLVKRKKQHFHHLAQYDVDLILGCNGFIWVGEHVVVDEKVKATEDQQKSSDEA 240
Query: 957 NANSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLN 1136
+N+T LETR+ ICR+ANAVRVLS LGF +TVE+I E S S N
Sbjct: 241 ---------------ENFTPLETRKHICRLANAVRVLSALGFTLTVELIIETAEASASSN 285
Query: 1137 IDIHDMLGAEFCVMVAEKEADRRSTINRRK 1226
++++DMLGAEF V AE+EA RR+ + R+K
Sbjct: 286 VEVNDMLGAEFYVQTAEREAKRRADLLRKK 315
>ref|XP_006418241.1| hypothetical protein EUTSA_v10008200mg [Eutrema salsugineum]
gi|557096012|gb|ESQ36594.1| hypothetical protein
EUTSA_v10008200mg [Eutrema salsugineum]
Length = 324
Score = 396 bits (1018), Expect = e-107
Identities = 197/321 (61%), Positives = 253/321 (78%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR+++L L+QTQ+VR E +E+LQSLSS + S+AS+ V D IP+N+E LKGHGT E+D
Sbjct: 3 MRKLQLPLSQTQKVRFERAIERLQSLSSTANSDASVIVTDSIPVNHEDAFLKGHGTSEVD 62
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+++AT+CGVVERVDKL+YVR+LR+RYKPE GDI+VGRV+EV+QK W+V++N QD VLM
Sbjct: 63 GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVSQKGWRVELNFTQDGVLM 122
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+TLPDGIQRRRT +DELNMRNIF E+DV+ AEVRNLQHDG+ QL ARS KYGKLE+G
Sbjct: 123 LSSMTLPDGIQRRRTSVDELNMRNIFVEDDVVCAEVRNLQHDGSLQLQARSQKYGKLEKG 182
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL+ V YLVK+ K HFH ++ G+ LI+G NG++WVGE +E D M +D K+ + ++
Sbjct: 183 QLLKVDPYLVKRSKHHFHYIESLGIDLIIGCNGFIWVGEHVEVRDPMVIDDQKDDEMISS 242
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
+ T EQ++ ETRQ+ICRI NA+RVLS LGF +TVE+I V LS S NID
Sbjct: 243 S-----TKNTGKEQSHIPPETRQSICRIGNAIRVLSNLGFTVTVEVIVETVNLSNSKNID 297
Query: 1143 IHDMLGAEFCVMVAEKEADRR 1205
IHDMLG+EF V+VAE EA+RR
Sbjct: 298 IHDMLGSEFHVVVAENEAERR 318
>ref|XP_002889455.1| ATRRP4 [Arabidopsis lyrata subsp. lyrata] gi|297335297|gb|EFH65714.1|
ATRRP4 [Arabidopsis lyrata subsp. lyrata]
Length = 322
Score = 396 bits (1018), Expect = e-107
Identities = 195/327 (59%), Positives = 254/327 (77%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
+R+++L L+QTQ+VR E +E+LQSLSS + S+AS+ V D IP+N++ LKGHGT E+D
Sbjct: 3 LRKLQLPLSQTQKVRFERAIERLQSLSSTANSDASVIVTDSIPVNHDDAFLKGHGTSEVD 62
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+++AT+CGVVERVDKL+YVR+LR+RYKPE GDI+VGRV+EVAQKRW+V++N QD VLM
Sbjct: 63 GELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFTQDGVLM 122
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ +PDGIQRRRT +DELNMRNIF E+DV+ AEVRN QHDG+ QL ARS KYGKLE+G
Sbjct: 123 LSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKG 182
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGELIEANDTMEVDTVKNSDQSNA 962
QL+ V YLVK+ K HFH ++ G+ LI+G NG++WVGE +E D M +D K+ + ++
Sbjct: 183 QLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDDQKDEEMISS 242
Query: 963 NSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLNID 1142
+S G EQN+ ETRQTICRI N +RVLS LGF +T+E+I V LS S NID
Sbjct: 243 SSTG-------KEQNHIPPETRQTICRIGNVIRVLSNLGFTVTLEVIIETVNLSNSKNID 295
Query: 1143 IHDMLGAEFCVMVAEKEADRRSTINRR 1223
I DMLG+EF V+VAE EA+RR T ++
Sbjct: 296 IQDMLGSEFHVVVAENEAERRRTKRKK 322
>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
distachyon]
Length = 319
Score = 391 bits (1004), Expect = e-106
Identities = 199/330 (60%), Positives = 255/330 (77%), Gaps = 2/330 (0%)
Frame = +3
Query: 243 MREIELSLNQTQRVRLETTLEKLQSLSSKSTSNASITVADFIPLNYEHDILKGHGTLELD 422
MR++ L LNQTQRVRLE L +LQSL+ + S AS+TVAD IP+N E +ILKGHGT + D
Sbjct: 1 MRDLHLPLNQTQRVRLEAALHELQSLAPAAASAASVTVADNIPVNQEDNILKGHGTSDHD 60
Query: 423 GQVIATLCGVVERVDKLIYVRSLRSRYKPETGDILVGRVLEVAQKRWKVDINSNQDAVLM 602
G+V+ATLCGVVERV+KL+YVR+LR+RYKPE GDI+VGRV+E+A KRW+++IN +QDAVLM
Sbjct: 61 GEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLM 120
Query: 603 LSSVTLPDGIQRRRTPIDELNMRNIFEENDVISAEVRNLQHDGTWQLHARSDKYGKLERG 782
LSS+ LPDGIQRRRT +DELNMR+IFEENDV+ AEVR QHDG+ L ARS KYGKL+RG
Sbjct: 121 LSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQRG 180
Query: 783 QLISVPSYLVKKQKQHFHQMQEYGVLLILGRNGYVWVGE--LIEANDTMEVDTVKNSDQS 956
QL++VP+YLVK++KQHFH +++Y V LILG NG+VWVG+ L+ N + D K SD+
Sbjct: 181 QLLTVPAYLVKRRKQHFHHLEQYDVDLILGCNGFVWVGQHVLVRENTESKEDKQKLSDEV 240
Query: 957 NANSGGYYTSVEVNEQNYTGLETRQTICRIANAVRVLSILGFHITVEIIKMIVELSTSLN 1136
+ +T +ETR+ ICR+ANAVRVLS LGF +T+E+I E S S N
Sbjct: 241 D---------------TFTPIETRKHICRLANAVRVLSALGFTLTIELIIQTAEASLSSN 285
Query: 1137 IDIHDMLGAEFCVMVAEKEADRRSTINRRK 1226
++I+DMLGAEF V AE+EA RR+ + R+K
Sbjct: 286 VEINDMLGAEFYVQTAEREARRRADLLRKK 315