BLASTX nr result
ID: Achyranthes22_contig00028601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00028601
(3672 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p... 1395 0.0
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1251 0.0
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 1227 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1219 0.0
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 1219 0.0
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1214 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1209 0.0
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 1209 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1209 0.0
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 1208 0.0
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 1205 0.0
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 1204 0.0
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 1203 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1202 0.0
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 1200 0.0
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe... 1196 0.0
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 1194 0.0
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 1194 0.0
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 1194 0.0
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr... 1190 0.0
>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
[Chenopodium album]
Length = 988
Score = 1395 bits (3611), Expect = 0.0
Identities = 693/988 (70%), Positives = 785/988 (79%), Gaps = 13/988 (1%)
Frame = -2
Query: 3560 MWRNASKSQLFRKINLSGQLKPSSYFRRLEEPSQDLPKIKPLLGHTGVNQRFPFVGFGGN 3381
MW+ ASK ++ RKI SG+LKPSS R +E SQD KI+ LG VN RFP +GFG N
Sbjct: 1 MWKKASKFEILRKIRNSGELKPSSNVSRWKESSQDSAKIRQFLGQNSVNPRFPMLGFGRN 60
Query: 3380 GEFLYQKNETGSFSFTFCTNPFGI-------SCCCYXXXXXXXXXXXXXXXXXXXXXXXE 3222
GE L + +E G +F F NPFGI + C Y
Sbjct: 61 GELLCRNSEMGGSNFMFYANPFGIFGFYAQSTSCSYATAAAAEEIVTASSEEDDEIRELV 120
Query: 3221 --INNLKTEDERGLGKEDPSNLIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADM 3048
IN L+ + + +++P N++AGM + +Y+ LRKRQIK+ETEAW +A REYQELLADM
Sbjct: 121 DEINKLERVKPQSIRRKEPINMVAGMTAGRYNVLRKRQIKVETEAWNEAAREYQELLADM 180
Query: 3047 CKKKLAPNLPYVQLLFLGWFDPLKVAIEAEQKLN--GEKKVDCTPCFDQLPADMMTVITM 2874
C++KLAPNLPY++ LFLGWF+PLK AI+A Q+ G + CFD+LPADMM VITM
Sbjct: 181 CEQKLAPNLPYMKSLFLGWFEPLKDAIKAHQEACKVGRNRPLYGECFDELPADMMAVITM 240
Query: 2873 HKXXXXXXXXXXXXXXXXVQAASQIGEAIEQEVKIQRFLEKSKRNSANKTKVEDDAAKAQ 2694
HK +QAA+QIGEA+EQE KI++FLEKSK+ A EDD+AKAQ
Sbjct: 241 HKLMGLLMTGSGNGGTTVIQAATQIGEAVEQEAKIRKFLEKSKKKPATNNNDEDDSAKAQ 300
Query: 2693 LRLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQ 2514
RLAKKVT LMKKQ + QVR+IV G DDSKPW QDNQVKVGCKLIQLL ETAYIQPP DQ
Sbjct: 301 QRLAKKVTTLMKKQKISQVREIVRGQDDSKPWSQDNQVKVGCKLIQLLAETAYIQPPADQ 360
Query: 2513 SADGPPDIRPAFMYTQKMIC-ESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXX 2337
ADGPPDIRPAF++TQK +C ESQKGL RRYGVIECDPLVR+GLEK A H
Sbjct: 361 LADGPPDIRPAFIHTQKTVCKESQKGLRRRYGVIECDPLVRRGLEKTARHMVIPYMPMLI 420
Query: 2336 XPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAK-KNLNTIFEALDTLGNTQWRIN 2160
PLNWTGY+KGAYL+LPSYI+R HG KQQ+D KR A+ NL T+FEALDTLGNT+WR+N
Sbjct: 421 PPLNWTGYDKGAYLYLPSYIMRTHGVKQQRDAIKRVARDNNLCTVFEALDTLGNTKWRVN 480
Query: 2159 KKVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQ 1980
KKVL++ ++IWASGGCLADLVD ED+PLP +PDTDDAE K+NAERHSQ
Sbjct: 481 KKVLSIIDRIWASGGCLADLVDREDMPLPGEPDTDDAEEIKKWKWKVKHVKKDNAERHSQ 540
Query: 1979 RCDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLC 1800
RCDTELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEF EGRPL
Sbjct: 541 RCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLG 600
Query: 1799 KSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQ 1620
KSGL WLK+H+ANLYAGGVDKLSYEGR+AFTEN LD++FDSADRPLEG+RWWL AEDPFQ
Sbjct: 601 KSGLNWLKVHVANLYAGGVDKLSYEGRVAFTENRLDDVFDSADRPLEGRRWWLTAEDPFQ 660
Query: 1619 CLAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPA 1440
CLA CI+LT+ALRSSSPEDY+SH+P+HQDGSCNGLQHYAALGRDKLGAEAVNLVAG KPA
Sbjct: 661 CLAACINLTDALRSSSPEDYLSHIPIHQDGSCNGLQHYAALGRDKLGAEAVNLVAGGKPA 720
Query: 1439 DVYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGAR 1260
DVYSGIAARV EIMR DA++DPS +PNA AKLLL+QVDRKLVKQTVMTSVYGVTYIG R
Sbjct: 721 DVYSGIAARVFEIMRGDAEKDPSIEPNAFHAKLLLNQVDRKLVKQTVMTSVYGVTYIGVR 780
Query: 1259 DQIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQ 1080
DQIK+RLKER+ +CYAAK TMTALEEMFEAAR IMGWLG+CAK I+SENQ
Sbjct: 781 DQIKRRLKERDAIVDDNDLFAASCYAAKTTMTALEEMFEAARSIMGWLGDCAKIIASENQ 840
Query: 1079 PVQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGS 900
P +W+TPLGLPV+QPYR+ GRRLVKTSLQ L+LRC+TDK+M +RQRTAFPPNFVHSLDGS
Sbjct: 841 PARWSTPLGLPVVQPYRNHGRRLVKTSLQVLTLRCDTDKVMAKRQRTAFPPNFVHSLDGS 900
Query: 899 HMMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQES 720
HMMMTAIACK AG+NFAGVHDSYWTHACDVD MN+ILREKFVELYEQPILENLLE FQES
Sbjct: 901 HMMMTAIACKKAGMNFAGVHDSYWTHACDVDKMNQILREKFVELYEQPILENLLESFQES 960
Query: 719 FPKLHFPPLPERGDFDLREVLESPYFFN 636
FP L FPPLPERGDFDLREVLESPYFFN
Sbjct: 961 FPTLQFPPLPERGDFDLREVLESPYFFN 988
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1251 bits (3238), Expect = 0.0
Identities = 645/987 (65%), Positives = 743/987 (75%), Gaps = 12/987 (1%)
Frame = -2
Query: 3560 MWRNASKSQLFRKINLSGQ---LKPSSYFRRLEEPSQDLPKIKPLLGHTGVNQRFPFVGF 3390
MWRN +K R++ LS Q PS+ R P K + L VN P G
Sbjct: 1 MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRFYFPD----KARALESQDHVNSLRPVAGL 56
Query: 3389 GGNGEFLYQKNETGSFSFTFCTNP---FGISCCCYXXXXXXXXXXXXXXXXXXXXXXXEI 3219
G +Q++E G F P FG+ + E+
Sbjct: 57 RRIGVLSFQQDELGRPGFGVTKTPVNFFGL----FGYQKGYASAAEAIASEEDMSGVDEV 112
Query: 3218 NNLKTEDERGLGKEDPSNLIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKK 3039
L E +G E LI G+ K++ LR+RQIK+ETEAW++A +EY+ELL+DMC++
Sbjct: 113 QELVEEVNKGDKLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQ 172
Query: 3038 KLAPNLPYVQLLFLGWFDPLKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKX 2865
KLAPNLPY++ LFLGWF+PL+ I AEQ L G+ + P FD LPADMM VITMHK
Sbjct: 173 KLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKL 232
Query: 2864 XXXXXXXXXXXXXXXVQAASQIGEAIEQEVKIQRFLEKSKRNSANKTKVE---DDAAKAQ 2694
VQAA IGEAIE EV+IQRF+EK+K+ SA+ + + K Q
Sbjct: 233 MGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQ 292
Query: 2693 LRLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQ 2514
+L KKV+ LMKKQ +QQVR+IV DDSKPWGQD VKVG +LI+LLIETAYIQPP DQ
Sbjct: 293 EKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQ 352
Query: 2513 SADGPPDIRPAFMYTQK-MICESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXX 2337
DGPPDIRPAF++T K +I E+QKG RRYGVIECDPLVRKGLEK A H
Sbjct: 353 LGDGPPDIRPAFVHTLKTVIKETQKG-TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLV 411
Query: 2336 XPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINK 2157
PLNWTGY+KGAYLFLPSY++RIHG +QQ++ KR +K L FEAL+TLGNT+WRINK
Sbjct: 412 PPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINK 471
Query: 2156 KVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQR 1977
+VL V ++IWASGG LADLVD ED+PLPE+PDT+D KEN+ERHSQR
Sbjct: 472 RVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQR 531
Query: 1976 CDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCK 1797
CD ELKL VARKMKDEDGF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL K
Sbjct: 532 CDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK 591
Query: 1796 SGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQC 1617
SGLRWLKIHLAN+YAGGVDKLSYEGR+AFTENHL++IFDSADRPLEG+RWWL+AEDPFQC
Sbjct: 592 SGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQC 651
Query: 1616 LAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPAD 1437
LA CI+L+EALRSSSPE +SHMPVHQDGSCNGLQHYAALGRDKLGA AVNLVAG+KPAD
Sbjct: 652 LATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAD 711
Query: 1436 VYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARD 1257
VYSGIAARVL+IM+ DAQ+DP+ +PNALRA+LL+ QVDRKLVKQTVMTSVYGVTYIGARD
Sbjct: 712 VYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARD 771
Query: 1256 QIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQP 1077
QIK+RLKER +CYAAK T+TAL EMFEAAR IM WLG+CAK I+SEN P
Sbjct: 772 QIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHP 831
Query: 1076 VQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSH 897
V+W TPLGLPV+QPYR LGR L+KTSLQ LSL+ ETDK+MV+RQRTAFPPNFVHSLDGSH
Sbjct: 832 VRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSH 891
Query: 896 MMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESF 717
MMMTA+AC+ AGLNFAGVHDSYWTHACDVD+MNRILREKFVELY PILENLLEGFQ+SF
Sbjct: 892 MMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSF 951
Query: 716 PKLHFPPLPERGDFDLREVLESPYFFN 636
P L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 952 PTLNFPPLPERGDFDLREVLESPYFFN 978
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 1227 bits (3175), Expect = 0.0
Identities = 636/1002 (63%), Positives = 732/1002 (73%), Gaps = 27/1002 (2%)
Frame = -2
Query: 3560 MWRNASKSQLFRKINLSGQ-LKPSSYFRRLEEPSQDLPKIKPLLGHTGVNQRFPFVGFGG 3384
MWRN + R+ +LS + L SS +L + L K++ T + + F+G
Sbjct: 1 MWRNFA-----RRTSLSSKKLNFSSDCTQLNQDLDILQKVRHPEAQTLLCSPYSFLGSRR 55
Query: 3383 NGEFLYQKNETGSFSFTFCTNPFGISCCCYXXXXXXXXXXXXXXXXXXXXXXXEINNLKT 3204
Q +E SFT TNPFG S + E+
Sbjct: 56 ISGLSSQNHEFIKPSFTNLTNPFGFSHFLFKGYATAAAQVIASTDESDFSGCDELQEQIE 115
Query: 3203 EDERGLGKEDP-----------SNLIAGMPSWKYDALRKRQIKIETEAWKDATREYQELL 3057
E + K D IAGM KY L+KRQIK+ETEAW++A REYQELL
Sbjct: 116 EINKHHKKMDAHFRQQQQQQQRKKTIAGMGIGKYTILKKRQIKMETEAWEEAAREYQELL 175
Query: 3056 ADMCKKKLAPNLPYVQLLFLGWFDPLKVAIEAEQKLNGEK--KVDCTPCFDQLPADMMTV 2883
DMC++KLAPNLPY++ LFLGWF+PL+ AI EQ+L+ EK K+ P FD LPADMM V
Sbjct: 176 TDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKNNKLSHGPYFDALPADMMAV 235
Query: 2882 ITMHKXXXXXXXXXXXXXXXXV-QAASQIGEAIEQEVKIQRFLEKSKRNSANKTKVEDDA 2706
ITMHK V QAA +GEAIE E +I RFLEK+K+ + E +
Sbjct: 236 ITMHKLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARIHRFLEKTKKKKKSTKNEEPEG 295
Query: 2705 ------------AKAQLRLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKL 2562
AK Q +L KKVT LMKKQ VQQVR + GHDDS PWGQ+ QVKVGC+L
Sbjct: 296 KLEPVTSDAEKLAKEQEKLRKKVTELMKKQKVQQVRGLTKGHDDSMPWGQEAQVKVGCRL 355
Query: 2561 IQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMICESQKGLNRRYGVIECDPLVRKGLE 2382
IQLLIETAYIQPPV+Q DG PDIRPAFM+T K + + + +RRYGVIECDP+VR GLE
Sbjct: 356 IQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLKNVMKDTQKTSRRYGVIECDPIVRNGLE 415
Query: 2381 KAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIF 2202
K+A H PLNW GY++GAYLFLPSY++R HG KQQ++ KR K L ++
Sbjct: 416 KSARHMVIPYMPMLVPPLNWEGYDQGAYLFLPSYVMRTHGAKQQRNAVKRTPWKQLEPVY 475
Query: 2201 EALDTLGNTQWRINKKVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXX 2022
EAL+TLGNT+WRINKK+L V ++IWA+GG LA L+D ED PLPE+ +T+D
Sbjct: 476 EALNTLGNTKWRINKKILTVVDRIWANGGRLAGLIDREDEPLPEELETEDENEIKKWKWK 535
Query: 2021 XXXXXKENAERHSQRCDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDL 1842
KEN+ERHSQRCD ELKL VARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSD+
Sbjct: 536 VKNVKKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDM 595
Query: 1841 CRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPL 1662
CRGILEF EGRPL KSG RWLKIHLAN+YAGGVDKLSYEGR+AFTENHLD IFDSADRPL
Sbjct: 596 CRGILEFAEGRPLGKSGFRWLKIHLANVYAGGVDKLSYEGRVAFTENHLDYIFDSADRPL 655
Query: 1661 EGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKL 1482
EG+RWWL AEDPFQCLA C +L EA RSSSPE +SHMP+HQDGSCNGLQHYAALGRDKL
Sbjct: 656 EGRRWWLGAEDPFQCLATCFNLAEAFRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKL 715
Query: 1481 GAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQT 1302
GA AVNLV+G+KPADVYSGIAARVL+IMR+DA++DP PNAL AKLL+++VDRKLVKQT
Sbjct: 716 GAAAVNLVSGEKPADVYSGIAARVLDIMRTDAEKDPGTNPNALHAKLLINEVDRKLVKQT 775
Query: 1301 VMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMG 1122
VMTSVYGVTYIGARDQIK+RLKER+ +CYAAK T+ ALEEMFE AR IM
Sbjct: 776 VMTSVYGVTYIGARDQIKRRLKERDAVADDPSLYAASCYAAKTTLMALEEMFEGARSIMA 835
Query: 1121 WLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQR 942
WLGECAK I+SENQPVQWTTPLGLPV+QPYR LGR L+KTSLQ L+L+ ETDKIMV+RQR
Sbjct: 836 WLGECAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQKETDKIMVKRQR 895
Query: 941 TAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYE 762
TAFPPNFVHSLDGSHMMMTA+ACKHAGLNFAGVHDSYWTHACDVD+MNRILRE FVELYE
Sbjct: 896 TAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMNRILRENFVELYE 955
Query: 761 QPILENLLEGFQESFPKLHFPPLPERGDFDLREVLESPYFFN 636
PILENLLEGFQ+SFPKL FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 956 APILENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 1219 bits (3155), Expect = 0.0
Identities = 605/846 (71%), Positives = 688/846 (81%), Gaps = 4/846 (0%)
Frame = -2
Query: 3161 IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDP 2982
+ GM KY+ LR+RQIK+ETEAW+DA +EYQELL DMC++KLAPNLPY++ LFLGWF+P
Sbjct: 150 VGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEP 209
Query: 2981 LKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAA 2808
L+ AI AEQKL G+ + P FDQLPA+MM VITMHK VQAA
Sbjct: 210 LRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAA 269
Query: 2807 SQIGEAIEQEVKIQRFLEKSKRNSANKTKVED--DAAKAQLRLAKKVTNLMKKQNVQQVR 2634
S IGEAIE E +I RFLEK+K+N+ + + E D K + RL KKV LMKKQ +QQVR
Sbjct: 270 SHIGEAIEHEARIHRFLEKTKKNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVR 329
Query: 2633 KIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMIC 2454
KIV DD KPWGQDN VKVGCKLIQ+LIETAYIQPP DQ D PPDIRPAFM+T K +
Sbjct: 330 KIVKQQDDEKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTV- 388
Query: 2453 ESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYIV 2274
E+ KG +RRYGVI+CDPLVRKGL+K A H P NW+GY++GAYLFLPSYI+
Sbjct: 389 ETVKG-SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIM 447
Query: 2273 RIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLVD 2094
R HG KQQ++ KR KK L +F+ALDTLGNT+WR+NK+VL + ++IWASGG LADLVD
Sbjct: 448 RTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVD 507
Query: 2093 CEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFYY 1914
ED+PLPE+PDT+D E KEN ERHSQRCD ELKL VARKMKDE+GFYY
Sbjct: 508 REDVPLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYY 567
Query: 1913 PHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDKL 1734
PHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL KSGLRWLKIHLAN+Y GGVDKL
Sbjct: 568 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKL 627
Query: 1733 SYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYVS 1554
SYEGR AF+ENH+++IFDSADRPLEG+RWWL AEDPFQCLA CI+++EALRS SPE +S
Sbjct: 628 SYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSIS 687
Query: 1553 HMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRDP 1374
HMP+HQDGSCNGLQHYAALGRDKLGA AVNLVAGDKPADVYSGIAARVL+IM+ DA +DP
Sbjct: 688 HMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDP 747
Query: 1373 SFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXXX 1194
+ PN +RA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 748 ATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSA 807
Query: 1193 ACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGRR 1014
ACYAAK T+TAL EMFEAAR IM WLG+CAK I+ ENQPV+WTTPLGLPV+QPYR LGR
Sbjct: 808 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRH 867
Query: 1013 LVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHDS 834
L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTAI CK AGL+FAGVHDS
Sbjct: 868 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDS 927
Query: 833 YWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVLE 654
YWTHA DVD MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERGDFDLREVLE
Sbjct: 928 YWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 987
Query: 653 SPYFFN 636
SPYFFN
Sbjct: 988 SPYFFN 993
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 1219 bits (3153), Expect = 0.0
Identities = 633/1007 (62%), Positives = 735/1007 (72%), Gaps = 32/1007 (3%)
Frame = -2
Query: 3560 MWRNASKSQLFRKINLSGQL---KPSSYFRRLEEPSQDLPKIKPLLGHTGVNQRFPFVGF 3390
MWRN +K RK NLS Q PSS + S L K + +N R +GF
Sbjct: 1 MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60
Query: 3389 GGNGEFLYQKNETGSFSFTFCTNPFGISCCC-YXXXXXXXXXXXXXXXXXXXXXXXEINN 3213
G+ QK E G S + P+GIS C Y E
Sbjct: 61 RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEIQ 120
Query: 3212 LKTED---ERGLGK---EDPSNLIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLAD 3051
ED E + + + P ++ GM KY+ LRKRQIK+ETEAW++A +EYQELLAD
Sbjct: 121 EMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLAD 180
Query: 3050 MCKKKLAPNLPYVQLLFLGWFDPLKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVIT 2877
MC++KLAPNLPY++ LFLGWF+PL+ AI A+Q + P FD LPAD M VIT
Sbjct: 181 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMAVIT 240
Query: 2876 MHKXXXXXXXXXXXXXXXXV-QAASQIGEAIEQEVKIQRFLEKSKR--NSANKTKVEDDA 2706
MHK V QAA IGEAIE EV+I RFLEK+K+ N+ +K K E D+
Sbjct: 241 MHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDK-KAEADS 299
Query: 2705 A-----------------KAQLRLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVK 2577
K Q RL KKV L+K+Q +QQVR IV +D KPWGQ+ VK
Sbjct: 300 VPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVK 359
Query: 2576 VGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMICESQKGLNRRYGVIECDPLV 2397
VGC+LIQLL++TAYIQPPVDQ DGPPDIRPAF++ K I + +RRYGVIECDP+V
Sbjct: 360 VGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDPIV 419
Query: 2396 RKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKN 2217
RKG+EK A H P+NWTGY++GAYLFLPSY++R HG KQQ++V KR +K
Sbjct: 420 RKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQ 479
Query: 2216 LNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXX 2037
L +FEALDTLG+T+WR+NK+VL V ++IWASGG LADLVD ED+PLPE+PDT+D
Sbjct: 480 LEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIR 539
Query: 2036 XXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNH 1857
KEN+ERHSQRCD ELKL +RKMKDE+GFYYPHNLDFRGRAYPMHP+LNH
Sbjct: 540 KWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 599
Query: 1856 LGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDS 1677
LGSD+CRGILEF EGR L KSGLRWLKIHLANLYAGGVDKLS++ R AFTENH+DEIFDS
Sbjct: 600 LGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEIFDS 659
Query: 1676 ADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAAL 1497
ADRPLEG+RWWL AEDPFQCLA CI+L EALRS SPE +S+MPVHQDGSCNGLQHYAAL
Sbjct: 660 ADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAAL 719
Query: 1496 GRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRK 1317
GRDKLGA AVNLV GDKPADVYSGIAARVL+IMR+DA++DP+ PNAL A+LL++QVDRK
Sbjct: 720 GRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQVDRK 779
Query: 1316 LVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAA 1137
LVKQTVMTSVYGVTY+GARDQIK+RLKER ACYAA+ T+TAL EMFEAA
Sbjct: 780 LVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMFEAA 839
Query: 1136 RGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIM 957
R IM WLGECAK I+SENQPV+W TPLGLPV+QPYR LGR L+KTSLQ L+L+ ETDK+M
Sbjct: 840 RSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVM 899
Query: 956 VRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKF 777
V+RQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACD+D+MNRILREKF
Sbjct: 900 VKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILREKF 959
Query: 776 VELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVLESPYFFN 636
VELYE PILENLLEGFQ+SFP L FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 960 VELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 993
Score = 1214 bits (3142), Expect = 0.0
Identities = 603/846 (71%), Positives = 687/846 (81%), Gaps = 4/846 (0%)
Frame = -2
Query: 3161 IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDP 2982
+ GM KY+ LR+RQIK+ETEAW+DA +EYQELL DMC++KLAPNLPY++ LFLGWF+P
Sbjct: 150 VGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEP 209
Query: 2981 LKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAA 2808
LK AI AEQKL G+ + P FDQLPA+MM VITMHK VQAA
Sbjct: 210 LKDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAA 269
Query: 2807 SQIGEAIEQEVKIQRFLEKSKRNSANKTKVED--DAAKAQLRLAKKVTNLMKKQNVQQVR 2634
S IGEAIE E +I RFLEK+K+N+ + + E D K + RL KKV LMKKQ +QQVR
Sbjct: 270 SHIGEAIEHEARIHRFLEKTKKNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVR 329
Query: 2633 KIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMIC 2454
KIV DD KPWGQDN VKVGC+LIQ+LIETAYIQPP DQ D PPDIRPAFM+T K +
Sbjct: 330 KIVKQQDDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTV- 388
Query: 2453 ESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYIV 2274
++ KG +RRYGVI+CDPLVRKGL+K A H P NW+GY++GAYLFLPSYI+
Sbjct: 389 DTVKG-SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIM 447
Query: 2273 RIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLVD 2094
R HG KQQ++ KR KK L +F+ALDTLGNT+WR+NK+VL + ++IWASGG LADLVD
Sbjct: 448 RTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVD 507
Query: 2093 CEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFYY 1914
ED+PLPE+PDT++ E KEN ERHSQRCD ELKL VARKMKDE+GFYY
Sbjct: 508 REDVPLPEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYY 567
Query: 1913 PHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDKL 1734
PHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL KSGLRWLKIHLAN+Y GGVDKL
Sbjct: 568 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKL 627
Query: 1733 SYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYVS 1554
S EGR AF+ENH+++IFDSADRPLEG+RWWL AEDPFQCLA CI ++EALRS SPE +S
Sbjct: 628 SCEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSIS 687
Query: 1553 HMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRDP 1374
HMP+HQDGSCNGLQHYAALGRDKLGA AVNLVAGDKPADVYSGIAARVL+IM+ DA +DP
Sbjct: 688 HMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDP 747
Query: 1373 SFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXXX 1194
+ PN +RA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 748 ATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAA 807
Query: 1193 ACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGRR 1014
ACYAAK T+TAL EMFEAAR IM WLG+CAK I+ ENQPV+WTTPLGLPV+QPYR LGR
Sbjct: 808 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRH 867
Query: 1013 LVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHDS 834
L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTAIACK AGL+FAGVHDS
Sbjct: 868 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDS 927
Query: 833 YWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVLE 654
YWTHA DVD MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERGDFDLREVLE
Sbjct: 928 YWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 987
Query: 653 SPYFFN 636
SPYFFN
Sbjct: 988 SPYFFN 993
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1209 bits (3129), Expect = 0.0
Identities = 599/847 (70%), Positives = 686/847 (80%), Gaps = 5/847 (0%)
Frame = -2
Query: 3161 IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDP 2982
I GM KY+ LR+RQIK+ETEAW++A +EYQELL DMC++KLAPNLPY++ LFLGWF+P
Sbjct: 158 IGGMGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEP 217
Query: 2981 LKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAA 2808
L+ AI AEQKL G+ + P FDQLPA+MM VITMHK VQAA
Sbjct: 218 LRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAA 277
Query: 2807 SQIGEAIEQEVKIQRFLEKSKRNSANKTKVED---DAAKAQLRLAKKVTNLMKKQNVQQV 2637
S IGEAIE E +I RFLEK+K+++A +E+ D K + RL KKV LMKKQ ++QV
Sbjct: 278 SYIGEAIEHEARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQV 337
Query: 2636 RKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMI 2457
RKIV DD KPWGQDN VKVGC+LIQ+L+ETAYIQPP DQ DGPPDIRPAF++T K +
Sbjct: 338 RKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV 397
Query: 2456 CESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYI 2277
E+ KG +RRYGVI+CDPLVRKGL+K A H P +W GY+KG YLFLPSYI
Sbjct: 398 -ETMKG-SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYI 455
Query: 2276 VRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLV 2097
+R HG KQQ++ KR KK L +F+ALDTLGNT+WR+N+KVL + ++IWASGG LADLV
Sbjct: 456 MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLV 515
Query: 2096 DCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFY 1917
D ED+PLPE PDT+D KEN ERHSQRCD ELKL VARKMKDEDGFY
Sbjct: 516 DREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFY 575
Query: 1916 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDK 1737
YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL SGLRWLKIHLAN+Y GGVDK
Sbjct: 576 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDK 635
Query: 1736 LSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYV 1557
LSYEGR+AF+ENHL++IFDSA+RPLEG+RWWL AEDPFQCLA CI++ EALRS SPE +
Sbjct: 636 LSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAI 695
Query: 1556 SHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRD 1377
S+MP+HQDGSCNGLQHYAALGRDKLGA AVNLVAGDKPADVYSGIAARVL+IM+ DA +D
Sbjct: 696 SYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKD 755
Query: 1376 PSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXX 1197
P+ PN +RA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 756 PANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFA 815
Query: 1196 XACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGR 1017
ACYAAK T+TAL EMFEAAR IM WLG+CAK I+ EN PV+WTTPLGLPV+QPYR LGR
Sbjct: 816 AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGR 875
Query: 1016 RLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHD 837
L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTAIACK +GL+FAGVHD
Sbjct: 876 HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHD 935
Query: 836 SYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVL 657
SYWTHACDVD MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERGDFDLREVL
Sbjct: 936 SYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 995
Query: 656 ESPYFFN 636
ESPYFFN
Sbjct: 996 ESPYFFN 1002
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 1209 bits (3128), Expect = 0.0
Identities = 599/856 (69%), Positives = 685/856 (80%), Gaps = 13/856 (1%)
Frame = -2
Query: 3164 LIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFD 2985
++AGM KY L++RQ+K+ETEAW+ REYQE+L DMC++KLAPNLPYV+ LFLGWF+
Sbjct: 7 MMAGMGIGKYTILKRRQVKMETEAWEQTAREYQEMLEDMCEQKLAPNLPYVKSLFLGWFE 66
Query: 2984 PLKVAIEAEQKL-NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXV-QA 2811
PL+ AI AEQ+L +V F+ LPADMM VITMHK V QA
Sbjct: 67 PLRDAILAEQELCKVNSRVPHRAYFNDLPADMMAVITMHKLMGLLMTGNGGTASIRVVQA 126
Query: 2810 ASQIGEAIEQEVKIQRFLEKSKRNSANKTKVEDDAA-----------KAQLRLAKKVTNL 2664
AS +GEAIE E KI +FLEK+K+ K K+ + + K Q +L KKVT L
Sbjct: 127 ASVVGEAIENEAKIHKFLEKTKKRKNLKEKISEGESVAAIYEGEKLTKEQEKLRKKVTTL 186
Query: 2663 MKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRP 2484
MKKQ V QVR+IV GHDDS PWGQ+ +KVG +LIQL+IETAYIQPP+DQ DGPPDIRP
Sbjct: 187 MKKQKVHQVRRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRP 246
Query: 2483 AFMYTQKMICESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKG 2304
AF++T K I + + +RRYGVIECDPLVRKGLEK+A H PLNWTGY++G
Sbjct: 247 AFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQG 306
Query: 2303 AYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWA 2124
AY FLPSY++RIHG KQQ+ KR ++ L +F+ALDTLGNT+WR+NK++L V ++IWA
Sbjct: 307 AYFFLPSYVMRIHGAKQQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILGVIDRIWA 366
Query: 2123 SGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVAR 1944
SGG LA LVD ED+PLPE+P T+D KEN+ERHSQRCD ELKL VAR
Sbjct: 367 SGGHLAGLVDREDVPLPEEPQTEDEAEIRKWRWKVKSVKKENSERHSQRCDVELKLAVAR 426
Query: 1943 KMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLA 1764
KMKDE+GFYYPHN+DFRGRAYPMHP+LNHLGSD+CRGILEF EGRPL KSGLRWLKIHLA
Sbjct: 427 KMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLA 486
Query: 1763 NLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEAL 1584
NLYAGGVDKLSY+GRI+FTENHLD+IFDSADRPLEGQRWWL AEDPFQCLAVCI+L+EAL
Sbjct: 487 NLYAGGVDKLSYDGRISFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEAL 546
Query: 1583 RSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLE 1404
RS SPE +SH PVHQDGSCNGLQHYAALGRDKLGA AVNLV G KPADVYSGIAARVL+
Sbjct: 547 RSPSPETAISHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYSGIAARVLD 606
Query: 1403 IMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNX 1224
IMR DA+ DP+ PN++ AKLL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 607 IMRRDAENDPAINPNSVHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCN 666
Query: 1223 XXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPV 1044
ACYAAK T+TALEEMFE ARGIM WLGECAK I+SENQPVQWTTP GLPV
Sbjct: 667 IADDPQLYSAACYAAKTTLTALEEMFEGARGIMAWLGECAKVIASENQPVQWTTPFGLPV 726
Query: 1043 IQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHA 864
+QPYR LGR+L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTA+ACK A
Sbjct: 727 VQPYRQLGRQLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEA 786
Query: 863 GLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPER 684
GLNFAGVHDSYWTHACDVD+MNRILREKFVELYE PILENLLE FQ SFP L FPPLPER
Sbjct: 787 GLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQSSFPNLKFPPLPER 846
Query: 683 GDFDLREVLESPYFFN 636
GDFDLR+VL+S YFFN
Sbjct: 847 GDFDLRDVLQSTYFFN 862
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1209 bits (3127), Expect = 0.0
Identities = 599/847 (70%), Positives = 685/847 (80%), Gaps = 5/847 (0%)
Frame = -2
Query: 3161 IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDP 2982
I GM KY+ LR+RQIK+ETEAW++A +EYQELL DMC++KLAPNLPY++ LFLGWF+P
Sbjct: 158 IGGMGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEP 217
Query: 2981 LKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAA 2808
L+ AI AEQKL G+ + P FDQLPA+MM VITMHK VQAA
Sbjct: 218 LRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAA 277
Query: 2807 SQIGEAIEQEVKIQRFLEKSKRNSANKTKVED---DAAKAQLRLAKKVTNLMKKQNVQQV 2637
S IGEAIE E +I RFLEK+K+++A +E+ D K + RL KKV LMKKQ ++QV
Sbjct: 278 SYIGEAIEHEARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQV 337
Query: 2636 RKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMI 2457
RKIV DD KPWGQDN VKVGC+LIQ+L+ETAYIQPP DQ DGPPDIRPAF++T K +
Sbjct: 338 RKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV 397
Query: 2456 CESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYI 2277
E+ KG +RRYGVI+CDPLVRKGL+K A H P +W GY+KG YLFLPSYI
Sbjct: 398 -ETMKG-SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYI 455
Query: 2276 VRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLV 2097
+R HG KQQ++ KR KK L +F+ALDTLGNT+WR+N+KVL + +IWASGG LADLV
Sbjct: 456 MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLV 515
Query: 2096 DCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFY 1917
D ED+PLPE PDT+D KEN ERHSQRCD ELKL VARKMKDEDGFY
Sbjct: 516 DREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFY 575
Query: 1916 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDK 1737
YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL SGLRWLKIHLAN+Y GGVDK
Sbjct: 576 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDK 635
Query: 1736 LSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYV 1557
LSYEGR+AF+ENHL++IFDSA+RPLEG+RWWL AEDPFQCLA CI++ EALRS SPE +
Sbjct: 636 LSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAI 695
Query: 1556 SHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRD 1377
S+MP+HQDGSCNGLQHYAALGRDKLGA AVNLVAGDKPADVYSGIAARVL+IM+ DA +D
Sbjct: 696 SYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKD 755
Query: 1376 PSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXX 1197
P+ PN +RA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 756 PANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFA 815
Query: 1196 XACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGR 1017
ACYAAK T+TAL EMFEAAR IM WLG+CAK I+ EN PV+WTTPLGLPV+QPYR LGR
Sbjct: 816 AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGR 875
Query: 1016 RLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHD 837
L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTAIACK +GL+FAGVHD
Sbjct: 876 HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHD 935
Query: 836 SYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVL 657
SYWTHACDVD MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERGDFDLREVL
Sbjct: 936 SYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 995
Query: 656 ESPYFFN 636
ESPYFFN
Sbjct: 996 ESPYFFN 1002
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 1208 bits (3125), Expect = 0.0
Identities = 598/847 (70%), Positives = 686/847 (80%), Gaps = 5/847 (0%)
Frame = -2
Query: 3161 IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDP 2982
I GM KY+ LR+RQIK+ETEAW++A +EYQELL DMC++KLAPNLPY++ LFLGWF+P
Sbjct: 158 IGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEP 217
Query: 2981 LKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAA 2808
L+ AI AEQKL G+ + C P FDQLPA+MM VITMHK VQAA
Sbjct: 218 LRDAIAAEQKLCDEGKNRGACAPFFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAA 277
Query: 2807 SQIGEAIEQEVKIQRFLEKSKRNSANKTKVED---DAAKAQLRLAKKVTNLMKKQNVQQV 2637
S IGEAIE E +I RFLEK+K+++A +ED D K + R+ KKV LMKKQ +QQV
Sbjct: 278 SHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQV 337
Query: 2636 RKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMI 2457
RKIV DD KPWGQDN VKVGC+LIQ+L+ETAYIQPP DQ D PPDIRPAF++T K +
Sbjct: 338 RKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV 397
Query: 2456 CESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYI 2277
E+ KG +RRYGVI+CDPLVRKGL+K A H P +W GY+KGAYLFLPSYI
Sbjct: 398 -ETMKG-SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYI 455
Query: 2276 VRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLV 2097
+R HG KQQ++ KR KK L +F+ALDTLGNT+WR+N+KVL + ++IWASGG LADLV
Sbjct: 456 MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLV 515
Query: 2096 DCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFY 1917
D ED+PLPE+PD +D KEN ERHSQRCD ELKL VARKMKDEDGFY
Sbjct: 516 DREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFY 575
Query: 1916 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDK 1737
YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL KSGLRWLKIHLAN+Y GGVDK
Sbjct: 576 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDK 635
Query: 1736 LSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYV 1557
LSYEGR+AF+ENH+++IFDSA+RPLEG+RWWL AEDPFQCLA CI++ EALRS SPE +
Sbjct: 636 LSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAI 695
Query: 1556 SHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRD 1377
S+MP+HQDGSCNGLQHYAALGRD LGA AVNLVAGDKPADVYSGIAARVL+IM+ DA +D
Sbjct: 696 SYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKD 755
Query: 1376 PSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXX 1197
P+ PN +RA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 756 PANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFA 815
Query: 1196 XACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGR 1017
ACYAAK T+TAL EMFEAAR IM WLG+CAK I+ EN PV+WTTPLGLPV+QPYR LGR
Sbjct: 816 AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGR 875
Query: 1016 RLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHD 837
L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTAIACK +GL+FAGVHD
Sbjct: 876 HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHD 935
Query: 836 SYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVL 657
SYWTHA DVD MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERGDFDLREVL
Sbjct: 936 SYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 995
Query: 656 ESPYFFN 636
ESPYFFN
Sbjct: 996 ESPYFFN 1002
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1205 bits (3117), Expect = 0.0
Identities = 598/847 (70%), Positives = 685/847 (80%), Gaps = 5/847 (0%)
Frame = -2
Query: 3161 IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDP 2982
I GM KY+ LR+RQIK+ETEAW++A +EYQELL DMC++KLAPNLPY++ LFLGWF+P
Sbjct: 158 IGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEP 217
Query: 2981 LKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAA 2808
L+ AI AEQKL G+ + P FDQLPA+MM VITMHK VQAA
Sbjct: 218 LRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAA 277
Query: 2807 SQIGEAIEQEVKIQRFLEKSKRNSANKTKVED---DAAKAQLRLAKKVTNLMKKQNVQQV 2637
S IGEAIE E +I RFLEK+K+++A +ED D K + RL KKV LMKKQ +QQV
Sbjct: 278 SHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQV 337
Query: 2636 RKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMI 2457
RKIV DD KPWGQDN VKVGC+LIQ+L+ETAYIQPP DQ D PPDIRPAF++T K +
Sbjct: 338 RKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV 397
Query: 2456 CESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYI 2277
E+ KG +RRYGVI+CDPLVRKGL+K A H P +W GY+KGAYLFLPSYI
Sbjct: 398 -ETMKG-SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYI 455
Query: 2276 VRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLV 2097
+R HG KQQ++ KR KK L +F+ALDTLGNT+WR+N+KVL + ++IWASGG LADLV
Sbjct: 456 MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLV 515
Query: 2096 DCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFY 1917
D ED+PLPE+PD +D KEN ERHSQRCD ELKL VARKMKDEDGFY
Sbjct: 516 DREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFY 575
Query: 1916 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDK 1737
YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL KSGLRWLKIHLAN+Y GGVDK
Sbjct: 576 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDK 635
Query: 1736 LSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYV 1557
LSYEGR+AF+ENH+++IFDSA+RPLEG+RWWL AEDPFQCLA CI++ EALRS SPE +
Sbjct: 636 LSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAI 695
Query: 1556 SHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRD 1377
S+MP+HQDGSCNGLQHYAALGRD LGA AVNLVAGDKPADVYSGIAARVL+IM+ DA +D
Sbjct: 696 SYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKD 755
Query: 1376 PSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXX 1197
P+ PN +RA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 756 PANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFA 815
Query: 1196 XACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGR 1017
ACYAAK T+TAL EMFEAAR IM WLG+CAK I+ EN PV+WTTPLGLPV+QPYR LGR
Sbjct: 816 AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGR 875
Query: 1016 RLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHD 837
L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTAIACK +GL+FAGVHD
Sbjct: 876 HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHD 935
Query: 836 SYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVL 657
SYWTHA DVD MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERGDFDLREVL
Sbjct: 936 SYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 995
Query: 656 ESPYFFN 636
ESPYFFN
Sbjct: 996 ESPYFFN 1002
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1204 bits (3114), Expect = 0.0
Identities = 597/847 (70%), Positives = 685/847 (80%), Gaps = 5/847 (0%)
Frame = -2
Query: 3161 IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDP 2982
I GM KY+ LR+RQIK+ETEAW++A +EYQELL DMC++KLAPNLPY++ LFLGWF+P
Sbjct: 158 IGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEP 217
Query: 2981 LKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAA 2808
L+ AI AEQKL G+ + P FDQLPA+MM VITMHK VQAA
Sbjct: 218 LRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAA 277
Query: 2807 SQIGEAIEQEVKIQRFLEKSKRNSANKTKVED---DAAKAQLRLAKKVTNLMKKQNVQQV 2637
S IGEAIE E +I RFLEK+K+++A +ED D K + R+ KKV LMKKQ +QQV
Sbjct: 278 SHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQV 337
Query: 2636 RKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKMI 2457
RKIV DD KPWGQDN VKVGC+LIQ+L+ETAYIQPP DQ D PPDIRPAF++T K +
Sbjct: 338 RKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV 397
Query: 2456 CESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYI 2277
E+ KG +RRYGVI+CDPLVRKGL+K A H P +W GY+KGAYLFLPSYI
Sbjct: 398 -ETMKG-SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYI 455
Query: 2276 VRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLV 2097
+R HG KQQ++ KR KK L +F+ALDTLGNT+WR+N+KVL + ++IWASGG LADLV
Sbjct: 456 MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLV 515
Query: 2096 DCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFY 1917
D ED+PLPE+PD +D KEN ERHSQRCD ELKL VARKMKDEDGFY
Sbjct: 516 DREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFY 575
Query: 1916 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDK 1737
YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL KSGLRWLKIHLAN+Y GGVDK
Sbjct: 576 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDK 635
Query: 1736 LSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYV 1557
LSYEGR+AF+ENH+++IFDSA+RPLEG+RWWL AEDPFQCLA CI++ EALRS SPE +
Sbjct: 636 LSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAI 695
Query: 1556 SHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRD 1377
S+MP+HQDGSCNGLQHYAALGRD LGA AVNLVAGDKPADVYSGIAARVL+IM+ DA +D
Sbjct: 696 SYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKD 755
Query: 1376 PSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXX 1197
P+ PN +RA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 756 PANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFA 815
Query: 1196 XACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGR 1017
ACYAAK T+TAL EMFEAAR IM WLG+CAK I+ EN PV+WTTPLGLPV+QPYR LGR
Sbjct: 816 AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGR 875
Query: 1016 RLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHD 837
L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTAIACK +GL+FAGVHD
Sbjct: 876 HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHD 935
Query: 836 SYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVL 657
SYWTHA DVD MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERGDFDLREVL
Sbjct: 936 SYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 995
Query: 656 ESPYFFN 636
ESPYFFN
Sbjct: 996 ESPYFFN 1002
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 1203 bits (3113), Expect = 0.0
Identities = 614/938 (65%), Positives = 707/938 (75%), Gaps = 16/938 (1%)
Frame = -2
Query: 3401 FVGFGGNGEFLYQKNETGSFSFTFCTNPFGISCCCYXXXXXXXXXXXXXXXXXXXXXXXE 3222
F GF G F QK++ G FS +P S + E
Sbjct: 59 FPGFRQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASAAEAVISTEEDMSGSEE 118
Query: 3221 INNLKT----EDERGLGKEDPSNLIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLA 3054
I+ L E+++ P + GM KY+ L+KRQIKIETEAW++A +EYQELL
Sbjct: 119 IHELMEAMAREEKKMSFLVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLM 178
Query: 3053 DMCKKKLAPNLPYVQLLFLGWFDPLKVAIEAEQKLNGEK-KVDCTPCFDQLPADMMTVIT 2877
DMC+ KLAPNLPY++ LFLGWF+PL+ +I EQ+L E ++ F++L ADMM V+T
Sbjct: 179 DMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGEQELCKENCRISHAAYFNELSADMMAVVT 238
Query: 2876 MHKXXXXXXXXXXXXXXXXV-QAASQIGEAIEQEVKIQRFLEKSKRNSANKTKVEDDA-- 2706
MHK V QAA QIGEAIE E KIQ FL K+K+ K + ++
Sbjct: 239 MHKLMGLLMTNTAGTGGIRVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESEP 298
Query: 2705 --------AKAQLRLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLL 2550
K Q +L KKVT L+KKQ V QVRKIV GHD SK WGQ+ VKVGC+LIQLL
Sbjct: 299 VTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQLL 358
Query: 2549 IETAYIQPPVDQSADGPPDIRPAFMYTQKMICESQKGLNRRYGVIECDPLVRKGLEKAAS 2370
IE AYIQPPVDQ D PPDIRPAF+++ K I + +RRYGVIECD LVRKGLEK A
Sbjct: 359 IENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTAR 418
Query: 2369 HXXXXXXXXXXXPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALD 2190
H P NWTGY++GAYLFLPSY++R HG KQQ++ KR +K L IFEALD
Sbjct: 419 HMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPIFEALD 478
Query: 2189 TLGNTQWRINKKVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXX 2010
TLGNT+WRINK+VL V +++WA+GG +A LVD ED+PLPEKPDT+D
Sbjct: 479 TLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPLPEKPDTEDEAEIQKWKWKVKAA 538
Query: 2009 XKENAERHSQRCDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGI 1830
K+N ERHS RCD ELKL VARKM+DEDGFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+
Sbjct: 539 NKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGV 598
Query: 1829 LEFGEGRPLCKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQR 1650
LEF EGRPL KSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLD+IFDSADRPLEG+R
Sbjct: 599 LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRR 658
Query: 1649 WWLNAEDPFQCLAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEA 1470
WWL+AEDPFQCLA CI+L+EALRSSSPE +SHMPVHQDGSCNGLQHYAALGRDKLGA +
Sbjct: 659 WWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAS 718
Query: 1469 VNLVAGDKPADVYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTS 1290
VNLVAG+KPADVYSGIAARV++IMR DA++DP+ P+AL A+LL++QVDRKLVKQTVMTS
Sbjct: 719 VNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLINQVDRKLVKQTVMTS 778
Query: 1289 VYGVTYIGARDQIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGE 1110
VYGVTYIGARDQIK+RLKER +CYAA+ T+TAL EMF+AAR IM WLGE
Sbjct: 779 VYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMFQAARSIMNWLGE 838
Query: 1109 CAKSISSENQPVQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFP 930
CAK ISSENQPV+W TPLGLPV+QPYR LGR L+KTSLQ L+L+ ETDK+M +RQRTAFP
Sbjct: 839 CAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFP 898
Query: 929 PNFVHSLDGSHMMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPIL 750
PNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACDVD+MNRILREKFVELYE PIL
Sbjct: 899 PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPIL 958
Query: 749 ENLLEGFQESFPKLHFPPLPERGDFDLREVLESPYFFN 636
ENLLE FQ+SFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 959 ENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 1202 bits (3111), Expect = 0.0
Identities = 629/1006 (62%), Positives = 736/1006 (73%), Gaps = 23/1006 (2%)
Frame = -2
Query: 3584 NQLL*PKKMWRNASKSQLFRKINLSGQLKPSSYFRRLEEP--SQDLPKIKPLLGHTGV-- 3417
N L P MWRN +K + R L RR SQDL I P + G
Sbjct: 32 NPLKKPTVMWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQDL--IFPEIMKFGTFE 89
Query: 3416 -----NQRFPFVGFGGNGEFLYQKNETGSFSFTFCTNPFGISCCCYXXXXXXXXXXXXXX 3252
+ F +GF GE +++ G SF N G S C
Sbjct: 90 PSSCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVAEAVSSTD 149
Query: 3251 XXXXXXXXXEINNL----KTEDERGLG--KEDPSNLIAGMPSWKYDALRKRQIKIETEAW 3090
EI L K E++R + + + + GM +Y LR+RQ+KIETEAW
Sbjct: 150 VEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAW 209
Query: 3089 KDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDPLKVAIEAEQKLN--GEKKVDCTPC 2916
+ A +EY+ELL DMC++KLAPNLPY++ LFLGWF+PL+ AI EQ+L G+ K P
Sbjct: 210 ELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPY 269
Query: 2915 FDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAASQIGEAIEQEVKIQRFLEKSKRNS 2736
FDQLPADMM+VITMHK VQAA IG+AIEQEV+I FLEK+KR
Sbjct: 270 FDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKK 329
Query: 2735 ANKTK-VE----DDAAKAQLRLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVG 2571
K K VE D Q +L KKVTNLMKKQ + R+IV GHD+SKPWG + + KVG
Sbjct: 330 VGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVG 389
Query: 2570 CKLIQLLIETAYIQPPVD-QSADGPPDIRPAFMYTQKMICESQKGLNRRYGVIECDPLVR 2394
+LI+LL++TAYIQPPVD Q AD PPDIRPAF++T K + K + RR+GVIECDPLV+
Sbjct: 390 SRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVK 449
Query: 2393 KGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNL 2214
KGLE+ A H PL WTGY+KGA+LFLPSY++R HG +QQ++ KR + L
Sbjct: 450 KGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQL 509
Query: 2213 NTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXX 2034
+FEAL+TLGNT+WRINK++ +V ++IWA GGCLADLVD D+PLPEKPDT+D
Sbjct: 510 EPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRK 569
Query: 2033 XXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHL 1854
K N+ERHSQRCD ELKL VARKMKDEDGF+YPHNLDFRGRAYPMHP+LNHL
Sbjct: 570 WKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHL 629
Query: 1853 GSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSA 1674
GSDLCRGILEF EGRPL SGL WLKIHLANL+AGGVDKLS+EGRI FTENHLD+IFDSA
Sbjct: 630 GSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSA 689
Query: 1673 DRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALG 1494
DRPLEG+RWWLNAEDPFQ LA CI+L+EALRSSSPE +SH+PVHQDGSCNGLQHYAALG
Sbjct: 690 DRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALG 749
Query: 1493 RDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKL 1314
RD+LGA AVNLVAG+KPADVYSGIAARVL+IM+ DA++DP+ P+ALRA++L++QVDRKL
Sbjct: 750 RDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKL 809
Query: 1313 VKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAAR 1134
VKQTVMTSVYGVTYIGARDQIK+RLKERN ACYAAK+T+TAL EMF+AAR
Sbjct: 810 VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAAR 869
Query: 1133 GIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMV 954
IM WLG+CAK I+SENQPV+WTTPLGLPV+QPYR LGR L+KTSLQ L+L+ ET+ IMV
Sbjct: 870 SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMV 929
Query: 953 RRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKFV 774
+RQRTAFPPNFVHSLDGSHMMMTAIACK AGLNFAGVHDSYWTHACDVD+MNR+LREKFV
Sbjct: 930 KRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFV 989
Query: 773 ELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREVLESPYFFN 636
+LYE PILENLLE FQ+SFP L FPPLPERGDFDLREVLESPYFFN
Sbjct: 990 QLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 1200 bits (3104), Expect = 0.0
Identities = 599/856 (69%), Positives = 686/856 (80%), Gaps = 13/856 (1%)
Frame = -2
Query: 3164 LIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFD 2985
++AGM KY L++RQIK+ETEAW+ A +EYQE+L DMC++KLAPNLPYV+ LFLGWF+
Sbjct: 133 MVAGMGIGKYAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFE 192
Query: 2984 PLKVAIEAEQKL-NGEKKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXV-QA 2811
PL+ AI AEQ+L +V F LPADMM VITMHK V QA
Sbjct: 193 PLRDAIVAEQELCKRNLRVSHRAHFSDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQA 252
Query: 2810 ASQIGEAIEQEVKIQRFLEKSKRNSANKTKV---EDDAA--------KAQLRLAKKVTNL 2664
AS +GEAIE E +I +FLEK+K+ + K+ E DAA K Q +L KKVT L
Sbjct: 253 ASVVGEAIEHEGRIHKFLEKTKKRKNVEAKISEGESDAAIEEGEKLSKEQEKLRKKVTTL 312
Query: 2663 MKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRP 2484
+KKQ VQQVR+IV GHDDS+PWGQ+ VKVG +LIQL+IETAYIQPP+DQ DGPPDIRP
Sbjct: 313 IKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRP 372
Query: 2483 AFMYTQKMICESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKG 2304
AF++T K I + + +RRYGVIECDPLVRKGLEK+A H PLNWTGY++G
Sbjct: 373 AFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQG 432
Query: 2303 AYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWA 2124
A+LFLPSY++RIHG KQQ+D KR ++ L +F+ALDTLGNT+WRINK+VL V ++IWA
Sbjct: 433 AHLFLPSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLVVVDRIWA 492
Query: 2123 SGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVAR 1944
SGG LA LVD ED PLPE+P T+D KEN+ERHSQRCD ELKL VAR
Sbjct: 493 SGGHLAGLVDREDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVAR 552
Query: 1943 KMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLA 1764
KMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPL KSGLRWLKIHLA
Sbjct: 553 KMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLA 612
Query: 1763 NLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEAL 1584
NLYAGGVDKLSY+GRI+FTENHLD+IFDSAD+PLEG+RWWL AEDPFQCLA CI+L+EAL
Sbjct: 613 NLYAGGVDKLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEAL 672
Query: 1583 RSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLE 1404
RS SPE SH PVHQDGSCNGLQHYAALGRDKLGA AVNLV G+KPADVYSGIA RVL+
Sbjct: 673 RSPSPETATSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLD 732
Query: 1403 IMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNX 1224
IM+ DA++DP+ PN++ AKLL++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER
Sbjct: 733 IMQRDAEKDPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCI 792
Query: 1223 XXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPV 1044
ACYAAK T+ ALEEMFE ARGIM WLGECAK I+SENQPV+WTTPLGLPV
Sbjct: 793 IADDPQLYSAACYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVRWTTPLGLPV 852
Query: 1043 IQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHA 864
+QPYR LGR L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTA+ACK A
Sbjct: 853 VQPYRQLGRHLIKTSLQVLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEA 912
Query: 863 GLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPER 684
GLNFAGVHDSYWTHACDVD+MNRILREKFVELYE PILENLLE FQ SFP L FPPLPER
Sbjct: 913 GLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQSSFPNLKFPPLPER 972
Query: 683 GDFDLREVLESPYFFN 636
G FDL++VL S YFFN
Sbjct: 973 GVFDLKDVLRSTYFFN 988
>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 1196 bits (3095), Expect = 0.0
Identities = 617/989 (62%), Positives = 726/989 (73%), Gaps = 14/989 (1%)
Frame = -2
Query: 3560 MWRNASKSQLFRK--INLSGQLKPSSY-FRRLEEPSQDLPKIKPLLGHTGVNQRFPFVGF 3390
+WRN +K + RK +++ Q +Y + + S KP + + RF VGF
Sbjct: 36 VWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPGNFKPFELSSCSSLRFSEVGF 95
Query: 3389 GGNGEFLYQKNETGSFSFTFCTNPFGISCCCYXXXXXXXXXXXXXXXXXXXXXXXEINNL 3210
G G ++ SF NP + C E+ L
Sbjct: 96 RGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAVSSTDVEEEVSVVDEVQEL 155
Query: 3209 ------KTEDERGLGKEDPSNLIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADM 3048
+ + E + N GM KY L++RQIKIETEAW+ A +EY+EL+ DM
Sbjct: 156 LQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDM 215
Query: 3047 CKKKLAPNLPYVQLLFLGWFDPLKVAIEAEQKL--NGEKKVDCTPCFDQLPADMMTVITM 2874
C++KLAPNLPY++ LFLGWF+PL+ AI+ EQ L G+ K P DQLPADMM+VITM
Sbjct: 216 CEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITM 275
Query: 2873 HKXXXXXXXXXXXXXXXXVQAASQIGEAIEQEVKIQRFLEKSKRNSANKTKV--EDDAAK 2700
HK V AA IGEAIEQEV+I +FLE +++ +K + E DAAK
Sbjct: 276 HKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGESDAAK 335
Query: 2699 AQL-RLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPP 2523
+ +L KKVTNLMKKQ ++ VR IV+ HD SK W + + KVG +LI+LL +TA+IQPP
Sbjct: 336 KEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPP 395
Query: 2522 VDQSADGPPDIRPAFMYTQKMICESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXX 2343
DQ ADGPPDIRPAF++T + + + K +RRYGVIECDPLV KGLEK A H
Sbjct: 396 ADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPM 455
Query: 2342 XXXPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRI 2163
PLNWTGY+KG Y FLPSY++RIHG +QQ++ KR ++ L +F+ALD LGNT+WR+
Sbjct: 456 LVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRV 515
Query: 2162 NKKVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHS 1983
NK+VL+V ++IWASGG LADLVD D+PLPE+PDT+D KEN ERHS
Sbjct: 516 NKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHS 575
Query: 1982 QRCDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPL 1803
QRCDTELKL VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPL
Sbjct: 576 QRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPL 635
Query: 1802 CKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPF 1623
KSGL WLKIHLANLYAGGVDKLS EGRIAFTENHLD+IFDS D+PLEG+RWWL AEDPF
Sbjct: 636 GKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPF 695
Query: 1622 QCLAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKP 1443
QCLAVCI+L EALRSSSPE ++SH+PVHQDGSCNGLQHYAALGRDKLGA +VNLV G+KP
Sbjct: 696 QCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKP 755
Query: 1442 ADVYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGA 1263
ADVYSGIA RVLEIMR DAQ+DP P ALRAKLL++QVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 756 ADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGA 815
Query: 1262 RDQIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSEN 1083
RDQIK+RLKER ACYAAK+T+TAL EMFEAARGIM WLGECAK I+SEN
Sbjct: 816 RDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASEN 875
Query: 1082 QPVQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDG 903
QPV+WTTPLGLPV+QPYR GR L+KTSLQ L+L+ ET+K+MV+RQRTAFPPNFVHSLD
Sbjct: 876 QPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDS 935
Query: 902 SHMMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQE 723
SHMMMTAIACK AGL+FAGVHDSYWTHACDVD+MN+ILREKFV+LYE PILENLLE FQ+
Sbjct: 936 SHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQ 995
Query: 722 SFPKLHFPPLPERGDFDLREVLESPYFFN 636
SFP L FPPLPERGDFDLR+VLESPYFFN
Sbjct: 996 SFPALTFPPLPERGDFDLRDVLESPYFFN 1024
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 1194 bits (3090), Expect = 0.0
Identities = 577/848 (68%), Positives = 690/848 (81%), Gaps = 8/848 (0%)
Frame = -2
Query: 3155 GMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPYVQLLFLGWFDPLK 2976
GM +Y +LR+RQI++ETEAW+ A +EY+ELLADMC++KLAPNLPY++ LFLGWF+PL+
Sbjct: 129 GMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLR 188
Query: 2975 VAIEAEQKLNGE--KKVDCTPCFDQLPADMMTVITMHKXXXXXXXXXXXXXXXXVQAASQ 2802
I EQ+L + + P F+ LPADMM VITMHK +QAA Q
Sbjct: 189 DQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 248
Query: 2801 IGEAIEQEVKIQRFLEKSKRNSANKTKVEDDAA------KAQLRLAKKVTNLMKKQNVQQ 2640
IGEAIE EV+I RFLEK+++ S + + E++AA K Q RL KKVT+LMKKQ ++Q
Sbjct: 249 IGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQ 308
Query: 2639 VRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPPDIRPAFMYTQKM 2460
VR IV D+S+PWGQD Q KVG +LI+L ++TA+IQPP QS+DG PDIRPAF + +
Sbjct: 309 VRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRT 368
Query: 2459 ICESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTGYNKGAYLFLPSY 2280
+ + Q+ +RRYGVI+CDPLVR+GL++ A H P+ WTGY+KGA+LFLPSY
Sbjct: 369 VAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSY 428
Query: 2279 IVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTEKIWASGGCLADL 2100
++R HG +QQ++ KR ++ + ++FEAL+TLG+T+WR+NK+VL++ ++IW+SGG LADL
Sbjct: 429 VMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADL 488
Query: 2099 VDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKLVVARKMKDEDGF 1920
VD D+PLPEKPDT+D KEN+ERHSQRCD ELKL VARKMKDE+GF
Sbjct: 489 VDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGF 548
Query: 1919 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLKIHLANLYAGGVD 1740
YYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPL KSGL WLKIHLANLYAGGVD
Sbjct: 549 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVD 608
Query: 1739 KLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDLTEALRSSSPEDY 1560
KLSY+GR+AFTENHL+EIFDSADRPLEG+RWWL AEDPFQCLAVC++LTEALRSSSPE
Sbjct: 609 KLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETT 668
Query: 1559 VSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAARVLEIMRSDAQR 1380
+SH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVY+GIA RVLEIMR DAQ+
Sbjct: 669 ISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQK 728
Query: 1379 DPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLKERNXXXXXXXXX 1200
DPS P+ RA+L++DQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER
Sbjct: 729 DPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELF 788
Query: 1199 XXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPLGLPVIQPYRSLG 1020
+CYAAKVT+TAL EMF+AARGIM WLG+CAK I+ EN+PV+WTTPLGLPV+QPYR LG
Sbjct: 789 GASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLG 848
Query: 1019 RRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIACKHAGLNFAGVH 840
R L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVH
Sbjct: 849 RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVH 908
Query: 839 DSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPPLPERGDFDLREV 660
DSYWTHACDVD MN+ILREKFVELY+ PILENLLE F++SFPKL FPPLPERGDFD++EV
Sbjct: 909 DSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEV 968
Query: 659 LESPYFFN 636
LESPYFFN
Sbjct: 969 LESPYFFN 976
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 1194 bits (3088), Expect = 0.0
Identities = 584/860 (67%), Positives = 693/860 (80%), Gaps = 8/860 (0%)
Frame = -2
Query: 3191 GLGKEDPSNL-IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPY 3015
G GK + + G+ KY LR+RQI+IETEAW+ A EY+ELLADMC++KLAPNLPY
Sbjct: 158 GRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPY 217
Query: 3014 VQLLFLGWFDPLKVAIEAEQKLNGEKKVDCTPC--FDQLPADMMTVITMHKXXXXXXXXX 2841
V+ LFLGWF+PL+ I AEQ+L GE+ + F+ LPADMM VITMHK
Sbjct: 218 VKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGS 277
Query: 2840 XXXXXXXVQAASQIGEAIEQEVKIQRFLEKSKRNSANKTKVED-----DAAKAQLRLAKK 2676
+QAA QIGEAIE EV+I +FLEK+K+ S + E+ D AK Q RL KK
Sbjct: 278 GDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKK 337
Query: 2675 VTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPP 2496
VT+LMKKQ ++QVR IV D+SKPWGQD KVG +LI+L+IETAYIQPP QSADGPP
Sbjct: 338 VTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPP 397
Query: 2495 DIRPAFMYTQKMICESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTG 2316
DIRPAF + + + Q+ +RRYGVI+CDPLVR+GL++ A H P++WTG
Sbjct: 398 DIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTG 457
Query: 2315 YNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTE 2136
Y+KGA+LFLPSY++R HG +QQ+D +R ++ + ++FEAL+TLG+T+WR+NK+VL++ +
Sbjct: 458 YDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVD 517
Query: 2135 KIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKL 1956
+IW+SGG LADLVD D+ LPEKPDT+D + KEN+ERHSQRCD ELKL
Sbjct: 518 RIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKL 577
Query: 1955 VVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLK 1776
VARKMKDEDGFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEF EGRPL KSGLRWLK
Sbjct: 578 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLK 637
Query: 1775 IHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDL 1596
IHLANLYAGGVDKLSY+GRIAFTENHL++IFDSADRPLEG+RWWL AEDPFQCLAVCI+L
Sbjct: 638 IHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINL 697
Query: 1595 TEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAA 1416
TEALRS SPE +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVY+GIA
Sbjct: 698 TEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIAT 757
Query: 1415 RVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLK 1236
RV+EIM++DA +DP+ P+A RA+LLLDQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLK
Sbjct: 758 RVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLK 817
Query: 1235 ERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPL 1056
ER+ +CYAAKVT+TAL EMF+AAR IM WLG+CAK I+ EN+PV+WTTPL
Sbjct: 818 ERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPL 877
Query: 1055 GLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIA 876
GLPV+QPYR LGR L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTA+A
Sbjct: 878 GLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 937
Query: 875 CKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPP 696
CK GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLLE F++SFP+L FPP
Sbjct: 938 CKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPP 997
Query: 695 LPERGDFDLREVLESPYFFN 636
LPERGDFDL +VL SPYFFN
Sbjct: 998 LPERGDFDLTDVLGSPYFFN 1017
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 1194 bits (3088), Expect = 0.0
Identities = 584/860 (67%), Positives = 693/860 (80%), Gaps = 8/860 (0%)
Frame = -2
Query: 3191 GLGKEDPSNL-IAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKLAPNLPY 3015
G GK + + G+ KY LR+RQI+IETEAW+ A EY+ELLADMC++KLAPNLPY
Sbjct: 124 GRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPY 183
Query: 3014 VQLLFLGWFDPLKVAIEAEQKLNGEKKVDCTPC--FDQLPADMMTVITMHKXXXXXXXXX 2841
V+ LFLGWF+PL+ I AEQ+L GE+ + F+ LPADMM VITMHK
Sbjct: 184 VKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGS 243
Query: 2840 XXXXXXXVQAASQIGEAIEQEVKIQRFLEKSKRNSANKTKVED-----DAAKAQLRLAKK 2676
+QAA QIGEAIE EV+I +FLEK+K+ S + E+ D AK Q RL KK
Sbjct: 244 GDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKK 303
Query: 2675 VTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQPPVDQSADGPP 2496
VT+LMKKQ ++QVR IV D+SKPWGQD KVG +LI+L+IETAYIQPP QSADGPP
Sbjct: 304 VTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPP 363
Query: 2495 DIRPAFMYTQKMICESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXXXXXXXXPLNWTG 2316
DIRPAF + + + Q+ +RRYGVI+CDPLVR+GL++ A H P++WTG
Sbjct: 364 DIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTG 423
Query: 2315 YNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQWRINKKVLNVTE 2136
Y+KGA+LFLPSY++R HG +QQ+D +R ++ + ++FEAL+TLG+T+WR+NK+VL++ +
Sbjct: 424 YDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVD 483
Query: 2135 KIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAERHSQRCDTELKL 1956
+IW+SGG LADLVD D+ LPEKPDT+D + KEN+ERHSQRCD ELKL
Sbjct: 484 RIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKL 543
Query: 1955 VVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEGRPLCKSGLRWLK 1776
VARKMKDEDGFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEF EGRPL KSGLRWLK
Sbjct: 544 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLK 603
Query: 1775 IHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAEDPFQCLAVCIDL 1596
IHLANLYAGGVDKLSY+GRIAFTENHL++IFDSADRPLEG+RWWL AEDPFQCLAVCI+L
Sbjct: 604 IHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINL 663
Query: 1595 TEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKPADVYSGIAA 1416
TEALRS SPE +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVY+GIA
Sbjct: 664 TEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIAT 723
Query: 1415 RVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKQRLK 1236
RV+EIM++DA +DP+ P+A RA+LLLDQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLK
Sbjct: 724 RVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLK 783
Query: 1235 ERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSISSENQPVQWTTPL 1056
ER+ +CYAAKVT+TAL EMF+AAR IM WLG+CAK I+ EN+PV+WTTPL
Sbjct: 784 ERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPL 843
Query: 1055 GLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHSLDGSHMMMTAIA 876
GLPV+QPYR LGR L+KTSLQ L+L+ ETDK+MV+RQRTAFPPNFVHSLDGSHMMMTA+A
Sbjct: 844 GLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 903
Query: 875 CKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEGFQESFPKLHFPP 696
CK GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLLE F++SFP+L FPP
Sbjct: 904 CKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPP 963
Query: 695 LPERGDFDLREVLESPYFFN 636
LPERGDFDL +VL SPYFFN
Sbjct: 964 LPERGDFDLTDVLGSPYFFN 983
>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
gi|557540028|gb|ESR51072.1| hypothetical protein
CICLE_v10030633mg [Citrus clementina]
Length = 980
Score = 1190 bits (3079), Expect = 0.0
Identities = 615/992 (61%), Positives = 716/992 (72%), Gaps = 17/992 (1%)
Frame = -2
Query: 3560 MWRNASKSQLFRKINLSGQLKPSSYFRRLEEPSQDLPKIKPLLGHTGVNQRFPFVGFGGN 3381
MWRN ++ R S PS ++ + + L KI L T ++ P +GF
Sbjct: 1 MWRNLARQSSTRNFKFS----PS----KVSQTTNFLKKITSLETQTLLDSSCPLLGFRRT 52
Query: 3380 GEFLYQKNETGSFSFTFCTNPFGI----SCCCYXXXXXXXXXXXXXXXXXXXXXXXEINN 3213
QK+ G +FT PFG+ S
Sbjct: 53 SFLSSQKSNLGQSNFTQSIYPFGVLTSRSYASAAEAIASESELSGSEEVQELIDQFNEKG 112
Query: 3212 LKTEDERGLGKEDPSNLIAGMPSWKYDALRKRQIKIETEAWKDATREYQELLADMCKKKL 3033
+ D + + P GM + KY L++RQIKIETEAW+ A +EYQ+LLADMC++KL
Sbjct: 113 VSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCEQKL 172
Query: 3032 APNLPYVQLLFLGWFDPLKVAIEAEQKLNGEKKVDCT--PCFDQLPADMMTVITMHKXXX 2859
APNLPYV+ LFLGWF+PL+ AI +Q +K T P F+ LPADMM VITMHK
Sbjct: 173 APNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMTYAPYFNNLPADMMAVITMHKLVG 232
Query: 2858 XXXXXXXXXXXXXVQAASQIGEAIEQEVKIQRFLEKSKRNSANKTKVEDDAA-------- 2703
QAA QIGEAIE E +I+ F E +K+ +A +E D+
Sbjct: 233 LLMTNAGEVRVV--QAACQIGEAIENEARIRSFFESTKKKNATDNNLEGDSEPVTNDPEK 290
Query: 2702 --KAQLRLAKKVTNLMKKQNVQQVRKIVNGHDDSKPWGQDNQVKVGCKLIQLLIETAYIQ 2529
K Q +L K+VT+L+KKQ ++QVR IV GH D KPWGQD VKVGC+LIQLL+ETAYIQ
Sbjct: 291 LIKEQEKLKKRVTSLIKKQKLRQVRGIVKGHVDLKPWGQDALVKVGCRLIQLLMETAYIQ 350
Query: 2528 PPVDQSADGPPDIRPAFMYTQKMIC-ESQKGLNRRYGVIECDPLVRKGLEKAASHXXXXX 2352
PPVDQ D PPDIRPAF++T K E+ KG RRYGVIECDPLVRKGLEK H
Sbjct: 351 PPVDQLGDSPPDIRPAFVHTLKSFTKEALKG--RRYGVIECDPLVRKGLEKTGRHMIIPY 408
Query: 2351 XXXXXXPLNWTGYNKGAYLFLPSYIVRIHGGKQQKDVFKREAKKNLNTIFEALDTLGNTQ 2172
PLNW GYN+G + FLPSY++R HG +QQ++ K + L +F+ALDTLG+T+
Sbjct: 409 MPMLVPPLNWRGYNRGGHFFLPSYVMRTHGARQQRETIKMTPRSQLEPVFQALDTLGSTK 468
Query: 2171 WRINKKVLNVTEKIWASGGCLADLVDCEDLPLPEKPDTDDAEXXXXXXXXXXXXXKENAE 1992
WR+NK++L V +++WASGGCLA LVD ED+PLPEKPDTDD K+N+E
Sbjct: 469 WRVNKRILGVIDRMWASGGCLAGLVDQEDVPLPEKPDTDDETEIKKWKWKVKTAKKQNSE 528
Query: 1991 RHSQRCDTELKLVVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFGEG 1812
+HSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EG
Sbjct: 529 KHSQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFEEG 588
Query: 1811 RPLCKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDEIFDSADRPLEGQRWWLNAE 1632
PL KSGL WLKIHLANLYAGGVDKLSYEGR+AFTENHLD+IFDSADRPLEG+RWWL AE
Sbjct: 589 CPLGKSGLHWLKIHLANLYAGGVDKLSYEGRVAFTENHLDDIFDSADRPLEGRRWWLGAE 648
Query: 1631 DPFQCLAVCIDLTEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAG 1452
DPFQCLA CI+L+EALRS SPE +SH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G
Sbjct: 649 DPFQCLATCINLSEALRSPSPESTISHIPVHMDGSCNGLQHYAALGRDKLGAAAVNLVGG 708
Query: 1451 DKPADVYSGIAARVLEIMRSDAQRDPSFQPNALRAKLLLDQVDRKLVKQTVMTSVYGVTY 1272
DKPADVYSGIAARVLEIMR+DA +DP+ P A A+LL++QVDRKLVKQTVMTSVYGVTY
Sbjct: 709 DKPADVYSGIAARVLEIMRADADKDPATYPYASCARLLINQVDRKLVKQTVMTSVYGVTY 768
Query: 1271 IGARDQIKQRLKERNXXXXXXXXXXXACYAAKVTMTALEEMFEAARGIMGWLGECAKSIS 1092
IGARDQIK+RLKER ACYAAK T+TAL EMFEAAR IM WLGECAK I+
Sbjct: 769 IGARDQIKKRLKERCAIEDDSKLFGAACYAAKTTLTALGEMFEAARSIMSWLGECAKVIA 828
Query: 1091 SENQPVQWTTPLGLPVIQPYRSLGRRLVKTSLQHLSLRCETDKIMVRRQRTAFPPNFVHS 912
SENQ V+WTTPLGLPV+QPY LGR L++TSLQ L+L+ ETDK+MV+RQRTAFPPNFVHS
Sbjct: 829 SENQAVRWTTPLGLPVVQPYHQLGRHLIRTSLQTLALQRETDKVMVKRQRTAFPPNFVHS 888
Query: 911 LDGSHMMMTAIACKHAGLNFAGVHDSYWTHACDVDDMNRILREKFVELYEQPILENLLEG 732
LDGSHMMMTA+ACK AGL+FAGVHDSYWTHACDVD MNRILREKFVELYEQPILE+LL
Sbjct: 889 LDGSHMMMTAVACKRAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYEQPILEDLLAS 948
Query: 731 FQESFPKLHFPPLPERGDFDLREVLESPYFFN 636
FQ+ FPKL+FPPLPERGDFDLR+VLESPYFFN
Sbjct: 949 FQKQFPKLNFPPLPERGDFDLRDVLESPYFFN 980