BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00027061
         (1988 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   612   e-172
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   610   e-172
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   608   e-171
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   608   e-171
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe...   605   e-170
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   604   e-170
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   603   e-170
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   602   e-169
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   601   e-169
ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chlor...   600   e-169
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   598   e-168
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   597   e-168
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   593   e-166
gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus...   591   e-166
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ...   591   e-166
ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Caps...   585   e-164
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   584   e-164
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   577   e-162
ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   575   e-161
ref|XP_002867828.1| pseudouridine synthase family protein [Arabi...   575   e-161

>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
            gi|550340110|gb|EEE85437.2| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 470

 Score =  612 bits (1579), Expect = e-172
 Identities = 279/423 (65%), Positives = 349/423 (82%)
 Frame = -1

Query: 1865 SRVKSAGTHIRKDKWAICCIASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYIS 1686
            S+ K +   +++D       +S +GYPEY RLLPCPS   PPR++HLVV E+ PV DYI 
Sbjct: 46   SKRKLSCESLKQDIACTTATSSVNGYPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYIC 105

Query: 1685 RILNLPPLYVADLIHFGAVYCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTF 1506
            + L+LPPL+VADLIHFGAV+ ALV P+PP TATP QI+ +E+ T+P +LK+R S+KGKT 
Sbjct: 106  KALDLPPLFVADLIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTV 165

Query: 1505 QEAQRTVRITHVDEQVEVGTYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGIS 1326
            +EAQ+T RITHVD+ +E G YLRV+VHP+RFPRCY+IDW SRI+ +T+S+VVLDKPAG S
Sbjct: 166  REAQKTFRITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTS 225

Query: 1325 VGGTSNNIEECCATFTSRALGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKK 1146
            VGGT++NIEE CATF +RALGLT+PL TTHQIDNCTEGCVV +RT E CS+FH KIR K 
Sbjct: 226  VGGTTDNIEESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKT 285

Query: 1145 VRKLYLALVAAPVSCGIVSHYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSII 966
            V+KLY+AL A+PV  G+V+HYMRP  +APR+VSEE+++GW LCQLEV++CK+VPWP +++
Sbjct: 286  VKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVM 345

Query: 965  EEKYQIKDCGWPHNYVAYECKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEP 786
            EEKY ++DCGWP    AYECKINLLTGRTHQIRAQL+A GAP++GDSMYMPAA+AE+  P
Sbjct: 346  EEKYCVQDCGWPSKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSP 405

Query: 785  GVSPFGESKREHTSEDDKRTAVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWW 606
            G +PFG+ K+++TSEDDK  AVE W+  HGKEP +AIGLQACQISWDD +H Y AGSPWW
Sbjct: 406  GCNPFGKYKKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWW 465

Query: 605  R*R 597
            R R
Sbjct: 466  RCR 468


>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  610 bits (1574), Expect = e-172
 Identities = 279/400 (69%), Positives = 346/400 (86%)
 Frame = -1

Query: 1805 ASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVY 1626
            +S +GYPEY RLLPCPS   PPRV+HLVV E   V DYIS+ L+LPPL+VADLIHFGAVY
Sbjct: 72   SSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVY 131

Query: 1625 CALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGT 1446
             ALV PEPP +ATP Q++ +++ T+P +L++R S+KGKT +EAQ+T RIT V+E VE GT
Sbjct: 132  YALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGT 191

Query: 1445 YLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRAL 1266
            YLRV+VHP+RFPRCYEIDW SRI+A+T+SYVVLDKPAG SVGGT++NIEE CATF +RAL
Sbjct: 192  YLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRAL 251

Query: 1265 GLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSH 1086
            GLT+PL TTHQIDNCTEGCVV +RT+E+CS+FH KIR KKV+KLY AL AAP+  GIV+H
Sbjct: 252  GLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTH 311

Query: 1085 YMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYEC 906
            YMRP  +APR++SE++++GW LCQLEVL+CK+VPWPS++IEEKY I+D GWP    A++C
Sbjct: 312  YMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKC 371

Query: 905  KINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRT 726
            KINLLTGRTHQIRAQL+A GAP++GDSMYMPAA+AE+T PG++PFG+ K+++T+E+D+ T
Sbjct: 372  KINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRET 431

Query: 725  AVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWW 606
            AV  WI+ HGKEP +AIGLQACQISWDD EHFY+AGSPWW
Sbjct: 432  AVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  608 bits (1569), Expect = e-171
 Identities = 279/398 (70%), Positives = 338/398 (84%)
 Frame = -1

Query: 1796 DGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCAL 1617
            +GYP+Y RLLPCPS   PPRV+H+VVLE  PV +YI + LNLPPLYVADLIHFGAVY AL
Sbjct: 74   NGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYAL 133

Query: 1616 VHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLR 1437
            V P+PP TATP QI+ ++KFT P  LK R+S+KGKT +EAQ+T RITHVDE VEVGTYLR
Sbjct: 134  VCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLR 193

Query: 1436 VYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLT 1257
            V+VHP+RFPRCYEIDW SRI+A+T+SYVVLDKPAG SVGGT++NIEE CATF +RALGLT
Sbjct: 194  VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 253

Query: 1256 SPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMR 1077
            SPL TTHQIDNCTEGCV+F+RT+E+CSIFH KIR KKV KLYLAL AAPV  GI++HYMR
Sbjct: 254  SPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMR 313

Query: 1076 PARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKIN 897
            P  +APR+VS++ ++GW +CQLEVL+C++V WP + IE KY+++DCGWP    AYEC+IN
Sbjct: 314  PINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWPSKKKAYECRIN 373

Query: 896  LLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVE 717
            LLTGRTHQIRAQL+  GAP++GDSMYMPA +AE+  PG++PFG+ K+E+T+E+DK TAV 
Sbjct: 374  LLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETAVA 433

Query: 716  NWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
             W +LHGKEP +AIGLQA +ISWD  EH Y AG+PWWR
Sbjct: 434  EWSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  608 bits (1567), Expect = e-171
 Identities = 272/400 (68%), Positives = 341/400 (85%)
 Frame = -1

Query: 1796 DGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCAL 1617
            +G  +YDRLLPCPS   PPR++HLVVLE+ PV DYI + L+LPPL+VADLI FGAV+ AL
Sbjct: 75   NGNSDYDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLIDFGAVHYAL 134

Query: 1616 VHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLR 1437
            V P PP+TATP QI+ +EKFT+P +LK+R S+KGKT +EAQ+T RITHVD+ +E GTYLR
Sbjct: 135  VCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLR 194

Query: 1436 VYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLT 1257
            V+VHP+RFPRCY+IDW SRI+A+T  YVVLDKPAG SVGGT++NIEE CATF +RALGLT
Sbjct: 195  VHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRALGLT 254

Query: 1256 SPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMR 1077
            +PL TTHQIDNCTEGCVV +R++E+CS+FH KIR KKV+KLYLAL A+PV  G++ +YMR
Sbjct: 255  TPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNYMR 314

Query: 1076 PARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKIN 897
            P  +APR++SEE+V GW LCQLEVL+C+KVPWP + IEEKY ++DCGWP    AYECKIN
Sbjct: 315  PVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYECKIN 374

Query: 896  LLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVE 717
            LLTGRTHQIRAQL+A GAP++GDSMYMPAA+AE+  PG++PFG+ ++++T+E D+  AV 
Sbjct: 375  LLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTNESDESMAVA 434

Query: 716  NWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR*R 597
             W++ HGKEPK+AIGLQAC+ISWD+ +H Y+AGSPWWR R
Sbjct: 435  EWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWRCR 474


>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  605 bits (1559), Expect = e-170
 Identities = 269/402 (66%), Positives = 342/402 (85%)
 Frame = -1

Query: 1808 IASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAV 1629
            ++S +GYPEY RLLPCPS   PPRV+HLVV E  PV +YI + L+LPP +VADLIHFGAV
Sbjct: 74   VSSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGAV 133

Query: 1628 YCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVG 1449
            Y ALV P+PP TATP Q++ +++ T+P +LK R S+KGKT +EAQ+T RITH DE VE G
Sbjct: 134  YYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEAG 193

Query: 1448 TYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRA 1269
            TYLRV+VHP+RFPRCY+IDW SRI+A+++ +VVLDKPAG +VGGT++NIEE CATF +RA
Sbjct: 194  TYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATRA 253

Query: 1268 LGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVS 1089
            LGLT+PL TTHQIDNCTEGCVV +RT+E+CS+FH KIR KKV+KLYLAL AAPV  GI++
Sbjct: 254  LGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGIIT 313

Query: 1088 HYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYE 909
            HYMRP  +APR++SE+++E W LCQLEV++CK++PWP++++EEKY ++DCGWP    AYE
Sbjct: 314  HYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWPSKDYAYE 373

Query: 908  CKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKR 729
            CKINLLTGRTHQ+RAQL+A GAP++GDSMYMPAA+AE+  PG++PFG+ K+ +T+E+DK 
Sbjct: 374  CKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYTTENDKE 433

Query: 728  TAVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            TAV  WI+ HGKEP +AIGLQACQISWDD +H +EA +PWWR
Sbjct: 434  TAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551677|gb|ESR62306.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  604 bits (1557), Expect = e-170
 Identities = 278/414 (67%), Positives = 338/414 (81%)
 Frame = -1

Query: 1844 THIRKDKWAICCIASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPP 1665
            TH      A     S  GYPEY RLLPCPS   PPRV+HLVV E  PV +YI R LNLPP
Sbjct: 65   THTDTTATAAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124

Query: 1664 LYVADLIHFGAVYCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTV 1485
            L+VADLIHFGAVY ALV P+PP TATP Q++ +++ T P +L +R S+KGKT +EAQ+T 
Sbjct: 125  LFVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTF 184

Query: 1484 RITHVDEQVEVGTYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNN 1305
            RITHVD+ VE GTYLRV+VHP+RFPRCY+IDW SRI+A+T+S+VVLDKPAG SVGGT++N
Sbjct: 185  RITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDN 244

Query: 1304 IEECCATFTSRALGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLA 1125
            IEE CATF SRALGLT+PL TTHQIDNCTEGCVV +RT+E+CSIFH KIR KKV+KLYLA
Sbjct: 245  IEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLA 304

Query: 1124 LVAAPVSCGIVSHYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIK 945
            L AAP+  GI++HYMRP  +APR++SE++++GW LCQLEV++CKKVPWP + + + Y I+
Sbjct: 305  LTAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIE 364

Query: 944  DCGWPHNYVAYECKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGE 765
            DCGWP    AYECKI LLTGRTHQ+RAQL+A GAP++GDSMYMPAA+A+L+ PG++PFG+
Sbjct: 365  DCGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGK 424

Query: 764  SKREHTSEDDKRTAVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
             ++E+ S+DDK  AV  WIS HGKEP +AIGLQAC ISWDD E  YEA SPWWR
Sbjct: 425  CQKEYASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  603 bits (1556), Expect = e-170
 Identities = 271/393 (68%), Positives = 330/393 (83%)
 Frame = -1

Query: 1781 YDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCALVHPEP 1602
            YDRLLPCPS   PPRV+HLVVLE+ PV DYI + L+LPPL+VADLIHFGAV+ ALV P+P
Sbjct: 3    YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62

Query: 1601 PSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLRVYVHP 1422
            P TATP QI+ +E+FT+P +LK+R S+KGKT +EAQ+T R++ V + +EVGTYLRVYVHP
Sbjct: 63   PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122

Query: 1421 RRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLTSPLLT 1242
            RRFPRCYEIDW SRI+A+T+SYVVLDKPAG SVGGT+NNIEE CATF +RALGLT PL T
Sbjct: 123  RRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPLKT 182

Query: 1241 THQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMRPARLA 1062
            THQIDNCTEGCVV +RT E+C +FH KIR  KV+KLYLAL A PV  G+++HYMRP  + 
Sbjct: 183  THQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIP 242

Query: 1061 PRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKINLLTGR 882
            PR+VSEE++EGW LCQLEVL+C+KVPWP ++ EEKY ++DCGWP    AYECKINLLTGR
Sbjct: 243  PRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGR 302

Query: 881  THQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVENWISL 702
            THQIRAQL+A GAP++GDSMYMPAA+AE+  PGV+PFG+ K+++T E+D+   V  W+  
Sbjct: 303  THQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWVER 362

Query: 701  HGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            HGKEP +AIGLQAC+ISW D +H Y+AG PWWR
Sbjct: 363  HGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  602 bits (1551), Expect = e-169
 Identities = 275/398 (69%), Positives = 335/398 (84%)
 Frame = -1

Query: 1796 DGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCAL 1617
            +GYP+Y RLLPCPS   PPRV+H+VVLE  PV +YI + LNLPPLYVADLIHFGAVY AL
Sbjct: 74   NGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYAL 133

Query: 1616 VHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLR 1437
            V P+PP TATP QI+ ++  T P  LK R+S+KGKT +EAQ+T RITHVDE VEVGTYLR
Sbjct: 134  VCPQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLR 193

Query: 1436 VYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLT 1257
            V+VHP+RFPRCYEIDW SRI+A+T+SYVVLDKPAG SVGGT++NIEE CATF +RALGLT
Sbjct: 194  VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 253

Query: 1256 SPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMR 1077
            SPL TTHQIDNCTEGCV+F+RT+E+CSIFH KIR KKV KLYLAL AAPV  GI++HYMR
Sbjct: 254  SPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMR 313

Query: 1076 PARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKIN 897
            P  +APR+VS++ ++GW +CQLEVL+C++V WP +  E KY+++DCGWP    AYEC+IN
Sbjct: 314  PINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWPSKKKAYECRIN 373

Query: 896  LLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVE 717
            LLTGRTHQIRAQL+  GAP++GDSMYMPA +AE+  PG++PFG+ K+E+T+E+DK T+V 
Sbjct: 374  LLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETSVA 433

Query: 716  NWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
             W +LHGKEP +AIGLQA +ISWD  EH Y AG+PWWR
Sbjct: 434  EWSALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 471


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  601 bits (1549), Expect = e-169
 Identities = 278/414 (67%), Positives = 336/414 (81%)
 Frame = -1

Query: 1844 THIRKDKWAICCIASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPP 1665
            TH      A     S  GYPEY RLLPCPS   PPRV+HLVV E  PV +YI R LNLPP
Sbjct: 65   THTDTAAIAAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124

Query: 1664 LYVADLIHFGAVYCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTV 1485
            L+VADLIHFGAVY ALV P+PP TATP Q++ +++ T P +L +R S+KGKT +EAQ+T 
Sbjct: 125  LFVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTF 184

Query: 1484 RITHVDEQVEVGTYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNN 1305
            RITHVD+ VE GTYLRV+VHP+RFPRCY+IDWNSRI+A+T+S+VVLDKPAG SVGGT++N
Sbjct: 185  RITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDN 244

Query: 1304 IEECCATFTSRALGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLA 1125
            IEE CATF SRALGLT+PL TTHQIDNCTEGCVV +RT+E+CSIFH KIR KKV+KLYLA
Sbjct: 245  IEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLA 304

Query: 1124 LVAAPVSCGIVSHYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIK 945
            L  AP+  GI++HYMRP  +APR+VSE+++ GW LCQLEV++CKKVPWP + + + Y I+
Sbjct: 305  LTTAPLPVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIE 364

Query: 944  DCGWPHNYVAYECKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGE 765
            DCGWP    AYECKI LLTGRTHQ+RAQL+A GAP++GDSMYMPAA+A+L+ PG++PFG+
Sbjct: 365  DCGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGK 424

Query: 764  SKREHTSEDDKRTAVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
             ++E+ S+DDK  AV  WIS HG EP +AIGLQAC ISWDD E  YEA SPWWR
Sbjct: 425  CQKEYASDDDKEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  600 bits (1546), Expect = e-169
 Identities = 274/398 (68%), Positives = 332/398 (83%)
 Frame = -1

Query: 1796 DGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCAL 1617
            +GYP+Y RLLPC S   PPRV+HLVVLE  PV +YIS+ L+LPP+YVADLIHFGAVY AL
Sbjct: 74   NGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYAL 133

Query: 1616 VHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLR 1437
            V P+PP TA+  +I+ ++KFT P  L  R+S+KGKT +EAQ+T RITH+DE VEVGTYLR
Sbjct: 134  VCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLR 193

Query: 1436 VYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLT 1257
            VYVHP+RFPRCYE+DW SRI+A+T SYVVLDKPAG SVGGT+NNIEE C TF +RALGLT
Sbjct: 194  VYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLT 253

Query: 1256 SPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMR 1077
            SPL TTHQIDNCTEGCV+ +RT+E+CSIFH KIR KKV KLYLALVA P+  GI++HYMR
Sbjct: 254  SPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVPLPKGIMTHYMR 313

Query: 1076 PARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKIN 897
            P  LAPR+VS + ++GW LCQLEVL+C++V WP + IE KY I+DCGWP    A+ECKIN
Sbjct: 314  PNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPSKKKAFECKIN 373

Query: 896  LLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVE 717
            LLTGRTHQIR QL+ +GAP++GDS+YMPAA+AE+  PG++PFG+ K+E+TSE+DK  AV 
Sbjct: 374  LLTGRTHQIRVQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKENAVA 433

Query: 716  NWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
             WI+LHGKEP +AIGLQA +ISWD  EH Y AG+PWWR
Sbjct: 434  EWIALHGKEPAVAIGLQAYEISWDSGEHIYNAGTPWWR 471


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  598 bits (1542), Expect = e-168
 Identities = 275/398 (69%), Positives = 331/398 (83%)
 Frame = -1

Query: 1796 DGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCAL 1617
            +GYP+Y RLLPC S   PPRV+HLVVLE  PV +YIS+ L+LPP+YVADLIHFGAVY AL
Sbjct: 74   NGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYAL 133

Query: 1616 VHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLR 1437
            V P+PP TA+  +I+ ++KFT P  L  R+S+KGKT +EAQ+T RITH+DE VEVGTYLR
Sbjct: 134  VCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLR 193

Query: 1436 VYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLT 1257
            VYVHP+RFPRCYE+DW SRI+A+T SYVVLDKPAG SVGGT+NNIEE C TF +RALGLT
Sbjct: 194  VYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLT 253

Query: 1256 SPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMR 1077
            SPL TTHQIDNCTEGCV+ +RT+E+CSIFH KIR KKV KLYLALVA P+  GI++HYMR
Sbjct: 254  SPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVPLPKGIMTHYMR 313

Query: 1076 PARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKIN 897
            P  LAPR+VS + ++GW LCQLEVL+C++V WP + IE KY I+DCGWP    A+ECKIN
Sbjct: 314  PNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPSKKKAFECKIN 373

Query: 896  LLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVE 717
            LLTGRTHQIRAQL+  GAP++GDSMYMPA +AE+  PG++PFG+ K+E+TSE+DK  AV 
Sbjct: 374  LLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMANPGLNPFGKCKKEYTSEEDKENAVA 433

Query: 716  NWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
             WI+LHGKEP +AIGLQA +ISWD  EH Y AG+PWWR
Sbjct: 434  EWIALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  597 bits (1539), Expect = e-168
 Identities = 265/409 (64%), Positives = 343/409 (83%)
 Frame = -1

Query: 1829 DKWAICCIASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVAD 1650
            D   +   +S D +P+YDRLLPCPS   PPR++HLV+ E  PV + I + L+LPPLYV+D
Sbjct: 69   DAGNLTATSSSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYVSD 128

Query: 1649 LIHFGAVYCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHV 1470
            LI FGAVY ALV P+PP  AT  QI+ +++ T P +L++R S+KGKT +EAQ+T R+THV
Sbjct: 129  LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 188

Query: 1469 DEQVEVGTYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECC 1290
            D+ VE GTYLRV+VHP+RFPR YEIDW SRI+A+ +SYVVLDKPAG SVGGT++NIEE C
Sbjct: 189  DQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESC 248

Query: 1289 ATFTSRALGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAP 1110
            ATF +RALG+T+PL+TTHQIDNCTEGCVV +RT+++CSIFH KIR KKV+KLYLAL A+P
Sbjct: 249  ATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASP 308

Query: 1109 VSCGIVSHYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWP 930
            +  GI++HYMRP  +APR++SE++++GW LCQLEVL+C+K+PWP++ I++KY ++DCGWP
Sbjct: 309  LPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWP 368

Query: 929  HNYVAYECKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREH 750
                AYECKINLLTG+THQIRAQ +A+ AP+IGDSMYMPAA+A+++ PG++PFG+ K++ 
Sbjct: 369  SQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDF 428

Query: 749  TSEDDKRTAVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            +SE +K TAV NW++ HGKEP +AIGLQACQISWDDDEHFYEAG PWWR
Sbjct: 429  SSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  593 bits (1528), Expect = e-166
 Identities = 265/401 (66%), Positives = 337/401 (84%)
 Frame = -1

Query: 1805 ASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVY 1626
            +S D + +YDRLLPCPS   PPR++HLVV E  PV ++I + L+LPPLYV+DLI FGAVY
Sbjct: 77   SSSDSFRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVSDLIQFGAVY 136

Query: 1625 CALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGT 1446
             ALV P+PP  AT  QI+ +++ T P +L++R S+KGKT +EAQ+T R+THVD+ VE GT
Sbjct: 137  YALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGT 196

Query: 1445 YLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRAL 1266
            YLRV+VHP+R PRCYEIDW SRI+ + +SYVVLDKPAG SVGGT++NIEE CATF +RAL
Sbjct: 197  YLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRAL 256

Query: 1265 GLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSH 1086
            G+T+PL+TTHQIDNCTEGCVV +RT+E+CS+FH KIR KKV+K YLAL A P+  GI++H
Sbjct: 257  GMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIITH 316

Query: 1085 YMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYEC 906
            YMRP  +APR++SE++++GW LCQLEVL+C+KVPWP++ I++KY I+DCGWP    AYEC
Sbjct: 317  YMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYEC 376

Query: 905  KINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRT 726
            KINLLTG+THQIRAQ +A+ AP+IGDSMYMPAA+A ++ PG++PFG+ K++ +SE +K T
Sbjct: 377  KINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFSSESEKET 436

Query: 725  AVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            AV NWI+ HGKEP +AIGLQACQISWDDDEHFYEA SPWWR
Sbjct: 437  AVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477


>gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  591 bits (1524), Expect = e-166
 Identities = 263/411 (63%), Positives = 340/411 (82%)
 Frame = -1

Query: 1835 RKDKWAICCIASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYV 1656
            + D   +   +S +  P+YDRLLPCP    PPRV+HLVV E  PV ++I + L LPPLYV
Sbjct: 67   KTDAENLTATSSSNSLPKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELPPLYV 126

Query: 1655 ADLIHFGAVYCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRIT 1476
             DLI FGAVY ALV P+PP +AT  QI+ +++ T P +L+QR S+KGKT +EAQ+T R+T
Sbjct: 127  TDLIQFGAVYYALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVT 186

Query: 1475 HVDEQVEVGTYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEE 1296
            H D+ VE GTYLRV+VHP+RFPRCYEIDW SRI+++ +SYVVLDKPAG SVGGT++NIEE
Sbjct: 187  HADQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEE 246

Query: 1295 CCATFTSRALGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVA 1116
             CATF +RALGLT+PL+TTHQIDNCTEGCVV +RT+E+CS+FH KIR KKV+KLYLAL +
Sbjct: 247  SCATFATRALGLTAPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAS 306

Query: 1115 APVSCGIVSHYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCG 936
            +P+  GI++HYMRP  +APR++SE++++GW +CQLE+ +C+KVPWP+  I++KY ++DCG
Sbjct: 307  SPLPTGIITHYMRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCG 366

Query: 935  WPHNYVAYECKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKR 756
            WP+   AYECKINLLTGRTHQIRAQ +A  AP++GDSMYMPAA+ +++ PG++PFG+ KR
Sbjct: 367  WPYQDFAYECKINLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYKR 426

Query: 755  EHTSEDDKRTAVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            + +SE +K TAV NWI+ HGKEP +AIGLQACQISWDDD+HFYE+GSPWWR
Sbjct: 427  DFSSESEKETAVVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477


>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 491

 Score =  591 bits (1524), Expect = e-166
 Identities = 270/398 (67%), Positives = 333/398 (83%)
 Frame = -1

Query: 1790 YPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCALVH 1611
            YPEY RLLPCPS   PPRV+HLVV E  PV +YI + L+LPP++VADLIHFGAVY ALV 
Sbjct: 93   YPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPPMFVADLIHFGAVYYALVC 152

Query: 1610 PEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLRVY 1431
            P+PP +ATP QI+ +++ T+P +L +R S++GKT +EAQ+T RITHVD+ VE GTYLRV+
Sbjct: 153  PQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLRVH 212

Query: 1430 VHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLTSP 1251
            VHP+RFPRCYEIDW SRI+A+T SYVVLDKPAG SVGGT++NIEE CATF +RALG ++P
Sbjct: 213  VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCATFANRALGFSTP 272

Query: 1250 LLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMRPA 1071
            L TTHQIDNCTEGCVV +RT+E+CS+FH KIR KKV+KLYLAL AAP+  G+++HYMRP 
Sbjct: 273  LKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAPLPIGVITHYMRPI 332

Query: 1070 RLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKINLL 891
             +APR+VSE++++GW LCQLEV++CKKVPWP  +I+E Y I+D GWP    AYECKINLL
Sbjct: 333  NMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGWPLKDHAYECKINLL 392

Query: 890  TGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVENW 711
            TGRTHQ+RAQL+A GAP++GDSMYMP  +AE+  PG++PFG+ K+ HTSE+DK  A+  W
Sbjct: 393  TGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKYKK-HTSENDKEIAITEW 451

Query: 710  ISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR*R 597
            IS  GKEP +AIGLQACQISWDD EHFY+A SPWWR R
Sbjct: 452  ISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWRSR 489


>ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Capsella rubella]
            gi|482553612|gb|EOA17805.1| hypothetical protein
            CARUB_v10006203mg [Capsella rubella]
          Length = 479

 Score =  585 bits (1509), Expect = e-164
 Identities = 268/405 (66%), Positives = 338/405 (83%), Gaps = 4/405 (0%)
 Frame = -1

Query: 1805 ASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSP-VCDYISRILNLPPLYVADLIHFGAV 1629
            +S  GYPEY+RL+PCP+   PPR++H+VVLED   V ++ISR L+LPPLYVADLI FGAV
Sbjct: 75   SSTSGYPEYNRLMPCPAYNNPPRIEHMVVLEDDVLVAEFISRQLDLPPLYVADLIRFGAV 134

Query: 1628 YCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVG 1449
            + ALV P+PP TATP +I+ +E+ TSP +LK+R S+KGKT +EAQ+T R+TH D+  E G
Sbjct: 135  HYALVCPKPPPTATPEEIKLFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTDQYAEAG 194

Query: 1448 TYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRA 1269
            TYLRV+VHP+R PRCYEIDW SRI+A+T SYV+LDKPAG +VGGT++NIEE CATF SRA
Sbjct: 195  TYLRVHVHPKRSPRCYEIDWKSRIIAVTDSYVILDKPAGTTVGGTTDNIEESCATFASRA 254

Query: 1268 LGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVS 1089
            L L  PL TTHQIDNCTEGCVVF+RT+E+CS+FH KIR+K+V+KLY AL AAP+  GI+S
Sbjct: 255  LDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHMKIRDKEVKKLYRALAAAPLPTGIIS 314

Query: 1088 HYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYE 909
            HYMRP  +APR+VSE+ ++GW LCQLEVL+CKK+PWP++  E+K+ I+DCGW     AYE
Sbjct: 315  HYMRPKNMAPRLVSEDSIKGWHLCQLEVLECKKIPWPNAGTEKKHDIEDCGWTSKEFAYE 374

Query: 908  CKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHT-SEDDK 732
            C INLLTG+THQIRAQL+A+GAP++GDSMYMPAA+AE+  P ++P+G++K+ +T  E+DK
Sbjct: 375  CTINLLTGKTHQIRAQLAAYGAPLVGDSMYMPAAIAEMMNPEINPYGKAKKHYTMEENDK 434

Query: 731  RTAVENWISLHGKEPKLAIGLQACQISWDDD--EHFYEAGSPWWR 603
             TAV  WI  HGKEP++ IGLQACQISWDDD  EHFYEAG+PWWR
Sbjct: 435  ETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 479


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 477

 Score =  584 bits (1505), Expect = e-164
 Identities = 265/401 (66%), Positives = 335/401 (83%)
 Frame = -1

Query: 1805 ASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVY 1626
            +S  GYP Y RLLPCPS   PPRV+HLVV E  PV +YI + L+LP  +VADLIHFGAVY
Sbjct: 76   SSVYGYP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLPAQFVADLIHFGAVY 134

Query: 1625 CALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGT 1446
             ALV P+PP TATP Q++ Y++ T+P +LK+R+S+KGKT +EAQ+T RITH D+ VE GT
Sbjct: 135  YALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVEDGT 194

Query: 1445 YLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRAL 1266
            YLRV+VHP+RFPRCY+IDW SR++A+T+ +VVLDKPAG +VGGT++NIEE CATFTSRAL
Sbjct: 195  YLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESCATFTSRAL 254

Query: 1265 GLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSH 1086
            GL++PL+TTHQIDNCTEGCVV +RT+++CS+FH KIR KKV+KLYLAL AAPV  G ++H
Sbjct: 255  GLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAPVPLGTITH 314

Query: 1085 YMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYEC 906
            YMRP  +APR++SE+ +E W LCQLEV++CKKVPWPSS+IEE+Y ++DCGWP    AYEC
Sbjct: 315  YMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWPSKDYAYEC 374

Query: 905  KINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRT 726
            KINLLTG+THQIRAQL+A G P++GDSMYMPAA+AE+  P ++PFG+ K+ +  E+D+  
Sbjct: 375  KINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHYAGENDEEI 434

Query: 725  AVENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            AV  W++ HGKEP +AIGLQACQISWDD EH +EA +PWWR
Sbjct: 435  AVTEWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  577 bits (1487), Expect = e-162
 Identities = 264/400 (66%), Positives = 329/400 (82%)
 Frame = -1

Query: 1802 SFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYC 1623
            S +G+  Y RL+PCP    PPRV+HLVV ++ PV +YI + L+LPPLYV DLI FGAVY 
Sbjct: 84   SSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKALDLPPLYVEDLIQFGAVYY 143

Query: 1622 ALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTY 1443
            ALV P+PP TA+P QI+ YE+ T P +L+QR S+KGKT +EAQ+T +IT  DE VE GTY
Sbjct: 144  ALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTY 203

Query: 1442 LRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALG 1263
            LRV+VHP+RFPRCY+IDW SRI+A+T  YVVLDKPAG SVGGT++NIEE CATF +RALG
Sbjct: 204  LRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALG 263

Query: 1262 LTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHY 1083
             ++PLLTTHQIDNCTEGCVV +R++E+CS+FH KIR KKV+KLYLAL AAPV  GI++HY
Sbjct: 264  FSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHY 323

Query: 1082 MRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECK 903
            MRP  +APR+VSE++V+GW LCQLEVL+CKKVPWPSS I+  Y ++DCGW     AYEC+
Sbjct: 324  MRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWALKDFAYECQ 383

Query: 902  INLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTA 723
            INLLTGRTHQIRAQL+A  APV+GDSMYMPAA+AE+  PG +PFG++K+ +++E+DK  A
Sbjct: 384  INLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSLA 443

Query: 722  VENWISLHGKEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            ++ WI+ HGKEP +A+GLQACQISWDD +H Y A  PWWR
Sbjct: 444  IDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483


>ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cicer arietinum]
          Length = 467

 Score =  575 bits (1482), Expect = e-161
 Identities = 268/451 (59%), Positives = 344/451 (76%), Gaps = 22/451 (4%)
 Frame = -1

Query: 1889 RSIGAPGSSRVK--SAGTHIRKDKWAICCIASFDG--------YPEYDRLLPCPSTVYPP 1740
            RS+  P ++R    S   H+ K  +   C +S +         YP+Y+RLLPCP+   PP
Sbjct: 16   RSLAVPSTARALHISLNKHLNKHAFGWSCRSSHNSSAVAFSLSYPKYNRLLPCPTHKIPP 75

Query: 1739 RVQHLVVLEDSPVCDYISRILNLPPLYVADLIHFGAVYCALVHPEPPSTATPVQIQAYEK 1560
            R++H+VV E  PV +YI + L+LPPL+VADLI FGAVY ALV P+PP TAT  +I+ ++K
Sbjct: 76   RIEHIVVSEGGPVLEYICKALDLPPLFVADLIKFGAVYFALVCPKPPPTATAEEIRVFKK 135

Query: 1559 FTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVGTYLRVYVHPRRFPRCYEIDWNSR 1380
             T P +L++R S+KGKT +EAQ+T  +T VD+ VE GTYLRV+VHP+RFPRCYEIDW SR
Sbjct: 136  ATEPLVLRKRASIKGKTIREAQKTFLVTDVDQFVEPGTYLRVHVHPKRFPRCYEIDWRSR 195

Query: 1379 IVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRALGLTSPLLTTHQIDNCTEGCVVF 1200
            I+A+ +SYV+LDKPAG SVGGT+ N EE CA F +RAL LT+PL+TTHQIDNCTEGCVV 
Sbjct: 196  IIAVEESYVILDKPAGTSVGGTTGNTEESCANFATRALELTTPLMTTHQIDNCTEGCVVL 255

Query: 1199 SRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVSHYMRPARLAPRIVSE-------- 1044
            +R +E+CS+FH KIR KKV+K+YLAL A+P+  GI+ HYMRP  +APR++SE        
Sbjct: 256  ARNKEYCSVFHGKIREKKVKKIYLALAASPLPTGIIKHYMRPINMAPRLISEGXTTQIGM 315

Query: 1043 ----EYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYECKINLLTGRTH 876
                 + +GW +CQLEVL+C K+PWP+++++EKY ++DCGWP    AYECKINLLTGRTH
Sbjct: 316  HSKDYFNKGWHICQLEVLECIKIPWPTTVVQEKYCVEDCGWPSQDYAYECKINLLTGRTH 375

Query: 875  QIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHTSEDDKRTAVENWISLHG 696
            QIRAQ +A  AP+IGDSMYMPAA+AE+  PG++PFG+ K++ TSE +K TAV NWI+ HG
Sbjct: 376  QIRAQFAACKAPLIGDSMYMPAAIAEMMNPGLNPFGKYKKDFTSESEKETAVINWIAQHG 435

Query: 695  KEPKLAIGLQACQISWDDDEHFYEAGSPWWR 603
            KEP +AIGLQACQISWDD EH YEAGSPWWR
Sbjct: 436  KEPSVAIGLQACQISWDDGEHIYEAGSPWWR 466


>ref|XP_002867828.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297313664|gb|EFH44087.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 476

 Score =  575 bits (1481), Expect = e-161
 Identities = 265/405 (65%), Positives = 332/405 (81%), Gaps = 4/405 (0%)
 Frame = -1

Query: 1805 ASFDGYPEYDRLLPCPSTVYPPRVQHLVVLEDSP-VCDYISRILNLPPLYVADLIHFGAV 1629
            +S  GYPEY+RL+PCP+   PPR++H+VVLED   V ++IS+ L+LPPLYV+DLI FGAV
Sbjct: 72   SSTSGYPEYNRLMPCPAHNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVSDLIRFGAV 131

Query: 1628 YCALVHPEPPSTATPVQIQAYEKFTSPHLLKQRESLKGKTFQEAQRTVRITHVDEQVEVG 1449
            + ALV P+PP TATP QI+ +E+ T P +LK+R S+KGKT +EAQ+T R+TH ++  E G
Sbjct: 132  HYALVCPKPPPTATPEQIELFEEVTCPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAEAG 191

Query: 1448 TYLRVYVHPRRFPRCYEIDWNSRIVAITKSYVVLDKPAGISVGGTSNNIEECCATFTSRA 1269
            TYLRV+VHP+R PRCYEIDW SRIVA+T SYV+LDKPAG +VGGT++NIEE CATF SRA
Sbjct: 192  TYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFASRA 251

Query: 1268 LGLTSPLLTTHQIDNCTEGCVVFSRTEEFCSIFHEKIRNKKVRKLYLALVAAPVSCGIVS 1089
            L L  PL TTHQIDNCTEGCVVF+RT+E+CS+FH KIRNK+V+KLY AL AAP+  GI+S
Sbjct: 252  LDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPTGIIS 311

Query: 1088 HYMRPARLAPRIVSEEYVEGWQLCQLEVLDCKKVPWPSSIIEEKYQIKDCGWPHNYVAYE 909
            HYMRP  +APR+VSE+ ++GW LCQLEVL+CKK+PWP +  E+K+ I+DCGW     AYE
Sbjct: 312  HYMRPKNMAPRLVSEDSIKGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSKEFAYE 371

Query: 908  CKINLLTGRTHQIRAQLSAHGAPVIGDSMYMPAALAELTEPGVSPFGESKREHT-SEDDK 732
            C INLLTG+THQIRAQL+A GAP++GDSMYMPAA+AE+  P  + +G++K+ +T  E+DK
Sbjct: 372  CTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPDTNLYGKAKKHYTMEENDK 431

Query: 731  RTAVENWISLHGKEPKLAIGLQACQISW--DDDEHFYEAGSPWWR 603
             TAV  WI  HGKEP++ IGLQACQISW  DD EHFYEAG+PWWR
Sbjct: 432  DTAVAEWIDRHGKEPRVGIGLQACQISWYDDDGEHFYEAGTPWWR 476