BLASTX nr result
ID: Achyranthes22_contig00026737
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00026737
(409 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 44 7e-09
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 51 3e-08
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 47 1e-07
gb|AAM47598.1| NBS/LRR resistance protein-like protein [Capsicum... 52 5e-07
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 51 4e-06
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 52 5e-06
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 35 5e-06
gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis] 44 8e-06
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 44.3 bits (103), Expect(4) = 7e-09
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = -2
Query: 303 EEITHLFKGEESWCMLFANYIVLVHKT-KGVNVKFEL*RHELES*GFKLSRS 151
+E+T + + WCMLFA IVL+ +T +GVN K L R LES G LSRS
Sbjct: 381 DELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLCLSRS 432
Score = 27.3 bits (59), Expect(4) = 7e-09
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 409 DDVKTNVRTSGGIMVDYPIKIGLHKAKFF*PFSY 308
+ KT VRT G +PI +GLH+ P+ +
Sbjct: 343 EGAKTAVRTYEGQTESFPITVGLHQGSSLSPYLF 376
Score = 27.3 bits (59), Expect(4) = 7e-09
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 58 LGSIFRKNEKIDRDVMHRI 2
LGSI +KN ++D D+ HRI
Sbjct: 468 LGSILQKNGELDEDLNHRI 486
Score = 24.6 bits (52), Expect(4) = 7e-09
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -3
Query: 140 NPRRNE--VKLGDKEFQSNECFKYLG 69
N +NE V++GD+E ++ F+YLG
Sbjct: 444 NGSQNELGVRIGDQEIPKSDRFRYLG 469
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 51.2 bits (121), Expect(3) = 3e-08
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -2
Query: 303 EEITHLFKGEESWCMLFANYIVLVHKTK-GVNVKFEL*RHELES*GFKLSRS 151
+E+T +G+ WCMLFA+ +VLV ++ GVN K EL R LES GF+LSR+
Sbjct: 35 DEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRT 86
Score = 26.2 bits (56), Expect(3) = 3e-08
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 385 TSGGIMVDYPIKIGLHKAKFF*P 317
TS G D+PIKIGLH+ P
Sbjct: 5 TSDGDTDDFPIKIGLHQGSALSP 27
Score = 25.4 bits (54), Expect(3) = 3e-08
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 58 LGSIFRKNEKIDRDVMHRI 2
LGS+ +K+ ID DV HRI
Sbjct: 123 LGSMLQKDGDIDEDVNHRI 141
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 46.6 bits (109), Expect(2) = 1e-07
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Frame = -2
Query: 330 SFFNPFPMS---EEITHLFKGEESWCMLFANYIVLVHKTKG-VNVKFEL*RHELES*GFK 163
S +PF + +E+T + WCMLFA+ IVL+ +T+ VN + E+ R LES GF+
Sbjct: 409 SVLSPFLFALVMDELTRSIQETVPWCMLFADDIVLIDETRDRVNARLEVWRQTLESKGFR 468
Query: 162 LSRS 151
LSR+
Sbjct: 469 LSRT 472
Score = 34.7 bits (78), Expect(2) = 1e-07
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 409 DDVKTNVRTSGGIMVDYPIKIGLHKAKFF*PFSY 308
D KT VRT GG +P++IGLH+ PF +
Sbjct: 383 DGAKTRVRTVGGDSEHFPVEIGLHQGSVLSPFLF 416
>gb|AAM47598.1| NBS/LRR resistance protein-like protein [Capsicum annuum]
Length = 122
Score = 52.0 bits (123), Expect(2) = 5e-07
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = -2
Query: 288 LFKGEESWCMLFANYIVLVHKTK-GVNVKFEL*RHELES*GFKLSRS 151
+F+GE WCMLFA+ +VL+ +T+ GVN K EL R LES GF++SR+
Sbjct: 4 VFQGEVPWCMLFADDVVLIDETRGGVNDKLELWRQTLESKGFRVSRT 50
Score = 27.3 bits (59), Expect(2) = 5e-07
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 58 LGSIFRKNEKIDRDVMHRI 2
LGS+ + N +ID DV HRI
Sbjct: 86 LGSVIQSNGEIDEDVSHRI 104
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 50.8 bits (120), Expect(2) = 4e-06
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = -2
Query: 354 LKLAYTRQSFFNPFPMS---EEITHLFKGEESWCMLFANYIVLVHKTK-GVNVKFEL*RH 187
+K+ + S +P+ +E+T +G+ WCMLFA+ +VLV ++ GVN K EL R
Sbjct: 275 IKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 334
Query: 186 ELES*GFKLSRS 151
LES GF+LSR+
Sbjct: 335 ILESKGFRLSRT 346
Score = 25.4 bits (54), Expect(2) = 4e-06
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 58 LGSIFRKNEKIDRDVMHRI 2
LGS+ +K+ ID DV HRI
Sbjct: 383 LGSMLQKDGDIDEDVNHRI 401
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 52.0 bits (123), Expect(2) = 5e-06
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Frame = -2
Query: 354 LKLAYTRQSFFNPFPMS---EEITHLFKGEESWCMLFANYIVLVHKTK-GVNVKFEL*RH 187
+K+ + S +P+ + +E+T +G+ WCMLFA+ +VLV ++ GVN K EL R
Sbjct: 225 IKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 284
Query: 186 ELES*GFKLSRS 151
LES GF+LSR+
Sbjct: 285 TLESKGFRLSRT 296
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 58 LGSIFRKNEKIDRDVMHRI 2
LGS+ +++ ID DV HRI
Sbjct: 331 LGSLLQEDGGIDEDVNHRI 349
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 35.4 bits (80), Expect(4) = 5e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1
Query: 409 DDVKTNVRTSGGIMVDYPIKIGLHKAKFF*PFSY 308
D V T+VRT GG D+PI IGLH+ P+ +
Sbjct: 68 DRVSTSVRTQGGESDDFPITIGLHQGSTLSPYLF 101
Score = 33.5 bits (75), Expect(4) = 5e-06
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = -2
Query: 264 CMLFANYIVLVHKTKG-VNVKFEL*RHELES*GFKLSRS 151
CMLFA+ IVL+ +++ +N + E R LE+ GF+LSRS
Sbjct: 119 CMLFADDIVLLGESREELNERLETWRRALETHGFRLSRS 157
Score = 22.3 bits (46), Expect(4) = 5e-06
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = -3
Query: 140 NPRR---NEVKLGDKEFQSNECFKYLG 69
N RR +EVK+GD FKYLG
Sbjct: 167 NKRRVSNSEVKIGDHIIPQVTRFKYLG 193
Score = 22.3 bits (46), Expect(4) = 5e-06
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 58 LGSIFRKNEKIDRDVMHRI 2
LGS+ + + +I+ DV HRI
Sbjct: 192 LGSVIQDDGEIEGDVNHRI 210
>gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]
Length = 1059
Score = 43.5 bits (101), Expect(3) = 8e-06
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -2
Query: 303 EEITHLFKGEESWCMLFANYIVLVHK-TKGVNVKFEL*RHELES*GFKLSR 154
+E+T + WCMLFA+ IVLV + +G+N K E R LE+ GFKLSR
Sbjct: 69 DELTREIQDGIPWCMLFADDIVLVDEHWEGINRKLERWRQTLEAQGFKLSR 119
Score = 29.6 bits (65), Expect(3) = 8e-06
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 409 DDVKTNVRTSGGIMVDYPIKIGLHK 335
D +VR GG M ++PI+IGLH+
Sbjct: 31 DGAVASVRIIGGYMEEFPIRIGLHQ 55
Score = 20.8 bits (42), Expect(3) = 8e-06
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 58 LGSIFRKNEKIDRDVMHRI 2
LGSI + ID D+ H+I
Sbjct: 155 LGSIVQCEGDIDEDIGHKI 173