BLASTX nr result

ID: Achyranthes22_contig00026507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00026507
         (244 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl...    64   2e-08
ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Popu...    59   7e-07
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1...    59   7e-07
gb|AFK47048.1| unknown [Lotus japonicus]                               58   1e-06
ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago trunc...    57   2e-06
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ...    57   2e-06
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin...    56   4e-06
gb|AFK48333.1| unknown [Medicago truncatula]                           55   1e-05
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc...    55   1e-05

>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 104

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/72 (51%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
 Frame = -3

Query: 200 AVRAPETGNTT------KDETSSKRRDLXXXXXXXXXXXXXXXXXADEPKRGTPEAKKKY 39
           A RAPE    T      K+E+SS RRDL                 ADEP+RGTP AKKKY
Sbjct: 30  ASRAPEAEKVTVELKQSKEESSSGRRDLIFAAAAAAACSIAKVAMADEPERGTPAAKKKY 89

Query: 38  GPICVTMPTARI 3
            P+CVTMPTARI
Sbjct: 90  APVCVTMPTARI 101


>ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Populus trichocarpa]
           gi|550348232|gb|ERP66154.1| hypothetical protein
           POPTR_0001s26410g [Populus trichocarpa]
          Length = 110

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/56 (58%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -3

Query: 167 KDETSSKRRDLXXXXXXXXXXXXXXXXXADE-PKRGTPEAKKKYGPICVTMPTARI 3
           K+E+SS RRDL                 ADE P+RGTPEAKKKY PICVTMPTARI
Sbjct: 4   KEESSSGRRDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARI 59


>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
           unknown [Populus trichocarpa]
           gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 105

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/56 (58%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -3

Query: 167 KDETSSKRRDLXXXXXXXXXXXXXXXXXADE-PKRGTPEAKKKYGPICVTMPTARI 3
           K+E+SS RRDL                 ADE P+RGTPEAKKKY PICVTMPTARI
Sbjct: 47  KEESSSGRRDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARI 102


>gb|AFK47048.1| unknown [Lotus japonicus]
          Length = 107

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200 AVRAPETGNTTKDETSSK-RRDLXXXXXXXXXXXXXXXXXADEPKRGTPEAKKKYGPICV 24
           A RA E  N   +E S+  RR+L                 ADEPK G+PEAKKKY P+CV
Sbjct: 34  ATRAVEGDNKVNEEGSNNGRRNLMFVSAAAAVCSVAGIALADEPKNGSPEAKKKYAPVCV 93

Query: 23  TMPTARI 3
           TMPTAR+
Sbjct: 94  TMPTARV 100


>ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488306|gb|AES69509.1| Photosystem II 5 kDa protein
           [Medicago truncatula] gi|388501032|gb|AFK38582.1|
           unknown [Medicago truncatula]
          Length = 105

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/71 (52%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
 Frame = -3

Query: 200 AVRAPETGNTTK----DETSSKRRDLXXXXXXXXXXXXXXXXXAD-EPKRGTPEAKKKYG 36
           AVRA E   T K     E S+ RRDL                 AD EP+RGTPEAKKKYG
Sbjct: 32  AVRAVEGEKTVKYDDDKEGSNGRRDLMFAAAAAAVCSVAGVAMADDEPRRGTPEAKKKYG 91

Query: 35  PICVTMPTARI 3
           P+CVT PTARI
Sbjct: 92  PVCVTNPTARI 102


>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
           gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
           protein [Populus trichocarpa]
          Length = 105

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/70 (51%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
 Frame = -3

Query: 200 AVRAPETGNT---TKDETSSKRRDLXXXXXXXXXXXXXXXXXADE-PKRGTPEAKKKYGP 33
           A RA E  N     ++E+S  RRDL                 ADE P+RGTPEAKKKY P
Sbjct: 33  ASRATEGVNVEMKNREESSGGRRDLMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAP 92

Query: 32  ICVTMPTARI 3
           ICVTMPTARI
Sbjct: 93  ICVTMPTARI 102


>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
           gi|255632908|gb|ACU16808.1| unknown [Glycine max]
          Length = 104

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/66 (48%), Positives = 36/66 (54%)
 Frame = -3

Query: 200 AVRAPETGNTTKDETSSKRRDLXXXXXXXXXXXXXXXXXADEPKRGTPEAKKKYGPICVT 21
           AV A +       + S+ RR+L                 ADEPK GTPEAKKKY PICVT
Sbjct: 36  AVEAEKVSYDNDMDGSNGRRNLMFAAAAAAVCSVAGMAVADEPKPGTPEAKKKYAPICVT 95

Query: 20  MPTARI 3
           MPTARI
Sbjct: 96  MPTARI 101


>gb|AFK48333.1| unknown [Medicago truncatula]
          Length = 108

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = -3

Query: 167 KDETSSKRRDLXXXXXXXXXXXXXXXXXADEPKRGTPEAKKKYGPICVTMPTARI 3
           K+ET+ +R  +                 ADEPKRG+PEAKK Y P+CVTMPTARI
Sbjct: 51  KEETNGRRNIMFAAAAAAVCSVAGMALAADEPKRGSPEAKKAYAPVCVTMPTARI 105


>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
           [Medicago truncatula]
          Length = 106

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -3

Query: 80  DEPKRGTPEAKKKYGPICVTMPTARI 3
           +EPKRGTPEAKKKY P+CVTMPTARI
Sbjct: 78  EEPKRGTPEAKKKYAPVCVTMPTARI 103


Top