BLASTX nr result

ID: Achyranthes22_contig00026247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00026247
         (200 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymera...    64   2e-08
ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymera...    64   2e-08
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr...    57   3e-06
ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymera...    57   3e-06
ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymera...    57   3e-06
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr...    57   3e-06
gb|ESW31798.1| hypothetical protein PHAVU_002G268700g [Phaseolus...    56   4e-06
gb|EOX92591.1| Transcription elongation factor (TFIIS) family pr...    56   6e-06
gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus pe...    56   6e-06

>ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Solanum tuberosum]
          Length = 348

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGGFQ-RH 99
           AKKQRTIQVMDIHEIPKP+NGFI +NKGGFQ RH
Sbjct: 313 AKKQRTIQVMDIHEIPKPKNGFIAKNKGGFQGRH 346


>ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Solanum lycopersicum]
          Length = 349

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGGFQ-RH 99
           AKKQRTIQVMDIHEIPKP+NGFI +NKGGFQ RH
Sbjct: 313 AKKQRTIQVMDIHEIPKPKNGFIAKNKGGFQSRH 346


>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 337

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGG 87
           AKKQRTIQVMDIHE+PKP+N F G+NKGG
Sbjct: 302 AKKQRTIQVMDIHELPKPKNAFFGKNKGG 330


>ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Glycine max]
          Length = 314

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGG 87
           AKKQRTIQVMD+HE+PKP+N F+G+NKGG
Sbjct: 279 AKKQRTIQVMDLHELPKPKNAFLGKNKGG 307


>ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Glycine max]
          Length = 313

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGG 87
           AKKQRTIQVMD+HE+PKP+N F+G+NKGG
Sbjct: 278 AKKQRTIQVMDLHELPKPKNAFLGKNKGG 306


>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
           gi|568820070|ref|XP_006464554.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
           hypothetical protein CICLE_v10025964mg [Citrus
           clementina]
          Length = 353

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGG 87
           AK+QRTIQVMDIHEIPKP+N F G+NKGG
Sbjct: 318 AKRQRTIQVMDIHEIPKPKNAFFGKNKGG 346


>gb|ESW31798.1| hypothetical protein PHAVU_002G268700g [Phaseolus vulgaris]
          Length = 308

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGG 87
           AKKQRTIQVMD+HE+PKP+N F G+NKGG
Sbjct: 273 AKKQRTIQVMDLHELPKPKNAFFGKNKGG 301


>gb|EOX92591.1| Transcription elongation factor (TFIIS) family protein, putative
           isoform 1 [Theobroma cacao] gi|508700696|gb|EOX92592.1|
           Transcription elongation factor (TFIIS) family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 336

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGG 87
           AK+QRTIQVMDIHE+PKP+N F G+NKGG
Sbjct: 301 AKRQRTIQVMDIHELPKPKNAFFGKNKGG 329


>gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus persica]
          Length = 335

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   AKKQRTIQVMDIHEIPKPRNGFIGRNKGG 87
           AKKQRTIQVMDIH+IPKP+N FI +NKGG
Sbjct: 296 AKKQRTIQVMDIHDIPKPKNSFIAKNKGG 324


Top