BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00025056
         (583 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     286   2e-75
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   281   1e-73
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   279   4e-73
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   278   6e-73
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc...   275   8e-72
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]     275   8e-72
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   274   1e-71
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     274   1e-71
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   273   2e-71
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   273   2e-71
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   270   2e-70
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-...   270   3e-70
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        266   2e-69
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   260   2e-67
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   249   5e-64
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     249   5e-64
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   236   2e-60
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...   226   3e-57
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap...   226   3e-57
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   226   4e-57

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  286 bits (733), Expect = 2e-75
 Identities = 139/193 (72%), Positives = 161/193 (83%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM +SKKGFLPMSHGI LSK Q P+T DE N+M  +PYASAI
Sbjct: 1039 RLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAI 1098

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTRPDVSYALS TSRYQ++PG  HWTAVKN+LKYL+RTK+ FL+YGGEE L 
Sbjct: 1099 GSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLV 1158

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DD+RSQSGF+F LNGGAVSWKS+KQ T+ADST             E 
Sbjct: 1159 VSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEA 1218

Query: 41   VWIKKFISELGVV 3
            VWIKKF+SELGV+
Sbjct: 1219 VWIKKFVSELGVM 1231


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  281 bits (718), Expect = 1e-73
 Identities = 136/193 (70%), Positives = 159/193 (82%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI L K Q P+T DE N+MS IPYASAI
Sbjct: 773  RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 832

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CT PDVSYALS TSRYQ++PG  HW AVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 833  GSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELV 892

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            VKG+TDASFQTD DDFRSQSGF+F LNGGAVSWKS+KQ T+ DS              E 
Sbjct: 893  VKGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAAKEA 952

Query: 41   VWIKKFISELGVV 3
            VWIKKF+S+LGV+
Sbjct: 953  VWIKKFVSQLGVM 965


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  279 bits (713), Expect = 4e-73
 Identities = 136/193 (70%), Positives = 159/193 (82%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ  YID+VL RFNM+NSK+GFLPM+HGI LSK Q P T DE ++MS IPYASAI
Sbjct: 619  RLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTTTDERDKMSDIPYASAI 678

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAMICTRPDVSYALS+TSRYQA+P   HWTAVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 679  GSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYGGDEELV 738

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DD+RSQSGF+F+LNGGAVSWKS+KQ T+ADST             E 
Sbjct: 739  VNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEG 798

Query: 41   VWIKKFISELGVV 3
            VWI+ FI+ELG+V
Sbjct: 799  VWIRNFITELGMV 811


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  278 bits (712), Expect = 6e-73
 Identities = 137/193 (70%), Positives = 161/193 (83%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VL RFNM+N+KKGFLPMSHGI  SK+Q P T DE +RM+ IPYASAI
Sbjct: 1035 RLIGLSQSTYIDKVLIRFNMQNTKKGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAI 1094

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAMICTR DVSYALS+TSRYQA+PG  HWTAVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 1095 GSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELV 1154

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DD+RSQSGF+F+LNGGAVSWKS+KQ T+ADST             E 
Sbjct: 1155 VNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEG 1214

Query: 41   VWIKKFISELGVV 3
            VWI+ FI+ELGVV
Sbjct: 1215 VWIRNFIAELGVV 1227


>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 767

 Score =  275 bits (702), Expect = 8e-72
 Identities = 133/193 (68%), Positives = 156/193 (80%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID++LKRFNM+ SKKGFLPMSHGI L K Q P+  DE N+MS IPYASAI
Sbjct: 513  RLIGLSQSTYIDKLLKRFNMQYSKKGFLPMSHGINLGKNQCPQATDERNKMSVIPYASAI 572

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            G IMYAM+CTRPDVSYALS TSRYQ +PG  HW AVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 573  GCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELV 632

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DDFRSQS F+F LNGGAVSWKS+KQ T+ADST             + 
Sbjct: 633  VNGYTDASFQTDKDDFRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKA 692

Query: 41   VWIKKFISELGVV 3
            VWIKKF+S+LGV+
Sbjct: 693  VWIKKFVSQLGVM 705


>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 657

 Score =  275 bits (702), Expect = 8e-72
 Identities = 133/193 (68%), Positives = 156/193 (80%)
 Frame = -3

Query: 581 RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
           R+IGLSQ++YID++LKRFNM+ SKKGFLPMSHGI L K Q P+  DE N+MS IPYASAI
Sbjct: 403 RLIGLSQSTYIDKLLKRFNMQYSKKGFLPMSHGINLGKNQCPQATDERNKMSVIPYASAI 462

Query: 401 GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
           G IMYAM+CTRPDVSYALS TSRYQ +PG  HW AVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 463 GCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELV 522

Query: 221 VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
           V G+TDASFQTD DDFRSQS F+F LNGGAVSWKS+KQ T+ADST             + 
Sbjct: 523 VNGYTDASFQTDKDDFRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKA 582

Query: 41  VWIKKFISELGVV 3
           VWIKKF+S+LGV+
Sbjct: 583 VWIKKFVSQLGVM 595


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  274 bits (700), Expect = 1e-71
 Identities = 135/193 (69%), Positives = 158/193 (81%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI L K Q P+T DE N+MS IPYASAI
Sbjct: 988  RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 1047

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTR DVSYALS TSRYQ++ G  HW AVKN+LKYL+RTK+ FL+YG +E L 
Sbjct: 1048 GSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELV 1107

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DDFRSQSGF+F LNGGAVSWKS+KQ T+ADST             E 
Sbjct: 1108 VNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEA 1167

Query: 41   VWIKKFISELGVV 3
            VWIKKF+S+LGV+
Sbjct: 1168 VWIKKFVSQLGVM 1180


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  274 bits (700), Expect = 1e-71
 Identities = 135/193 (69%), Positives = 158/193 (81%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI L K Q P+T DE N+MS IPYASAI
Sbjct: 901  RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 960

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTR DVSYALS TSRYQ++ G  HW AVKN+LKYL+RTK+ FL+YG +E L 
Sbjct: 961  GSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELV 1020

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DDFRSQSGF+F LNGGAVSWKS+KQ T+ADST             E 
Sbjct: 1021 VNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEA 1080

Query: 41   VWIKKFISELGVV 3
            VWIKKF+S+LGV+
Sbjct: 1081 VWIKKFVSQLGVM 1093


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  273 bits (699), Expect = 2e-71
 Identities = 135/193 (69%), Positives = 156/193 (80%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            ++IGLSQ++YID+VL RFNM +SKKGF+PMSHGI LSKTQ P T DE  RMS+IPYASAI
Sbjct: 686  KIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAI 745

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+ TRPDV+ ALSMTSRYQ++PG  HW  V+N+ KYL+RTK+ FL+YGG E L 
Sbjct: 746  GSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELV 805

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DDFRSQSGF F LNGGAVSWKS KQST+ADST             EV
Sbjct: 806  VSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEV 865

Query: 41   VWIKKFISELGVV 3
            VWI+KFI+ELGVV
Sbjct: 866  VWIRKFITELGVV 878


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  273 bits (699), Expect = 2e-71
 Identities = 135/193 (69%), Positives = 157/193 (81%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI L K Q P+T DE N+MS IPYASAI
Sbjct: 910  RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 969

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTRPDVSYALS TSRYQ++PG  HW AVKN+LKYL+RTK+ FL YGG+E L 
Sbjct: 970  GSIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEELV 1029

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQ D DDFRSQSGF+F LNGGAVSWKS+KQ  + DST             E 
Sbjct: 1030 VNGYTDASFQIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDST----TEAEYIAASEA 1085

Query: 41   VWIKKFISELGVV 3
            VWIKKF+S+LGV+
Sbjct: 1086 VWIKKFVSQLGVM 1098


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  270 bits (690), Expect = 2e-70
 Identities = 132/193 (68%), Positives = 157/193 (81%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IG SQ++YID+VLKRFNM++SKKGFLP+SHGI L K Q P+T DE N+MS IPYASAI
Sbjct: 664  RLIG-SQSTYIDKVLKRFNMQDSKKGFLPLSHGINLGKNQCPQTTDERNKMSVIPYASAI 722

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTRPDV YALS TS+YQ++PG  HW AVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 723  GSIMYAMLCTRPDVPYALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLIYGGQEELV 782

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V  +TDASFQTD DDFRSQSGF+F LNGGAVSWKS+KQ T+ADST             E 
Sbjct: 783  VNNYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEA 842

Query: 41   VWIKKFISELGVV 3
             WIKKF+S+LGV+
Sbjct: 843  AWIKKFVSQLGVM 855


>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550175|gb|ABA92972.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  270 bits (689), Expect = 3e-70
 Identities = 133/193 (68%), Positives = 156/193 (80%)
 Frame = -3

Query: 581 RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
           R+IGL Q++YID+VLKRFNM++SKKGFLPMSH I L K Q  +T DE N+MS IPYASAI
Sbjct: 22  RLIGLRQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCSQTTDERNKMSVIPYASAI 81

Query: 401 GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
           GSIMYAM+CTRPDVSYALS TSRYQ++PG  HW AVKN+LKYL RTK+ FL+YGG+E L 
Sbjct: 82  GSIMYAMLCTRPDVSYALSATSRYQSDPGETHWIAVKNILKYLIRTKDMFLVYGGQEELV 141

Query: 221 VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
           V  +TDASFQTD DDFRSQSGF+F LNGGAVSWKS+KQ T+A+ST             E 
Sbjct: 142 VNDYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTLANSTTKTEYIAASEAAKEA 201

Query: 41  VWIKKFISELGVV 3
           VWIKKF+S+LGV+
Sbjct: 202 VWIKKFVSQLGVM 214


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  266 bits (681), Expect = 2e-69
 Identities = 128/188 (68%), Positives = 153/188 (81%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM++SKKGFLPMSH I L K Q P+T DE N+MS IPYASAI
Sbjct: 761  RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCPQTTDERNKMSVIPYASAI 820

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CT PDVSYALS T+RYQ++PG  HW AVKN+LKYL+RT++ FL+YGG+E L 
Sbjct: 821  GSIMYAMLCTCPDVSYALSATNRYQSDPGESHWIAVKNILKYLRRTEDMFLVYGGQEELV 880

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            V G+TDASFQTD DDFRS+SGF+F LNGG VSWKS+KQ T+ADST             + 
Sbjct: 881  VNGYTDASFQTDKDDFRSRSGFVFCLNGGVVSWKSSKQDTVADSTTEAEYIAASEAAKDA 940

Query: 41   VWIKKFIS 18
            VWIKKF+S
Sbjct: 941  VWIKKFVS 948


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550379|gb|ABA93176.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 938

 Score =  260 bits (665), Expect = 2e-67
 Identities = 123/165 (74%), Positives = 146/165 (88%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI L K Q P+T +E N+MS IPYASAI
Sbjct: 758  RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTNERNKMSVIPYASAI 817

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTRPDVSYALS TS+YQ++PG  HW A+KN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 818  GSIMYAMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKYLRRTKDMFLVYGGQEELV 877

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADST 87
            V G+TDASFQ D DDFRSQSGF+F LNGGAVSWKS+KQ T+ADST
Sbjct: 878  VNGYTDASFQIDKDDFRSQSGFVFYLNGGAVSWKSSKQDTVADST 922


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  249 bits (635), Expect = 5e-64
 Identities = 119/165 (72%), Positives = 142/165 (86%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLS+++YID+VLK FNM++SKKGFLPMSHGI L+K Q  +T +E N+MS IPYASAI
Sbjct: 962  RLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAI 1021

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTRPDVSY LS TSRYQ++P   HW AVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 1022 GSIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELV 1081

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADST 87
            V G+TDASFQTD DDFRSQSGF+F LNG AVSWKS+KQ T A+ST
Sbjct: 1082 VNGYTDASFQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANST 1126


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  249 bits (635), Expect = 5e-64
 Identities = 119/165 (72%), Positives = 142/165 (86%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLS+++YID+VLK FNM++SKKGFLPMSHGI L+K Q  +T +E N+MS IPYASAI
Sbjct: 904  RLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAI 963

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTRPDVSY LS TSRYQ++P   HW AVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 964  GSIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELV 1023

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADST 87
            V G+TDASFQTD DDFRSQSGF+F LNG AVSWKS+KQ T A+ST
Sbjct: 1024 VNGYTDASFQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANST 1068


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  236 bits (603), Expect = 2e-60
 Identities = 115/159 (72%), Positives = 133/159 (83%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI   K Q P+T DE N+MS IPYA AI
Sbjct: 1503 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINHGKNQCPQTTDERNKMSVIPYAWAI 1562

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GSIMYAM+CTR DVSYALS TSRYQ++PG  HW AVKN+LKYL+RTK+ FL+YGG+E L 
Sbjct: 1563 GSIMYAMLCTRIDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELV 1622

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQS 105
            V G+ DASFQTD DDFR QSGF+F LNG AVSWKS   S
Sbjct: 1623 VNGYIDASFQTDKDDFRLQSGFVFCLNGRAVSWKSVMTS 1661


>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score =  226 bits (576), Expect = 3e-57
 Identities = 109/153 (71%), Positives = 128/153 (83%), Gaps = 3/153 (1%)
 Frame = -3

Query: 581 RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
           R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI L K Q P+T DE N+MS IPYASAI
Sbjct: 416 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 475

Query: 401 GSIMYAMICTRPDVSYALSMTSRYQA---NPGNDHWTAVKNVLKYLKRTKENFLMYGGEE 231
           GSI+Y M+CTRPDVSYALS TSRYQ    +PG  HW  VKN+LKYL+RTK+ FL+YGG+E
Sbjct: 476 GSIVYGMLCTRPDVSYALSATSRYQGYVPSPGESHWIVVKNILKYLRRTKDMFLVYGGQE 535

Query: 230 MLCVKGFTDASFQTDIDDFRSQSGFIFVLNGGA 132
            + V G+TDASFQTD DDFR Q GF+F LNGGA
Sbjct: 536 EIVVNGYTDASFQTDKDDFRLQFGFVFCLNGGA 568


>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
          Length = 637

 Score =  226 bits (576), Expect = 3e-57
 Identities = 109/153 (71%), Positives = 128/153 (83%), Gaps = 3/153 (1%)
 Frame = -3

Query: 581 RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
           R+IGLSQ++YID+VLKRFNM++SKKGFLPMSHGI L K Q P+T DE N+MS IPYASAI
Sbjct: 404 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 463

Query: 401 GSIMYAMICTRPDVSYALSMTSRYQA---NPGNDHWTAVKNVLKYLKRTKENFLMYGGEE 231
           GSI+Y M+CTRPDVSYALS TSRYQ    +PG  HW  VKN+LKYL+RTK+ FL+YGG+E
Sbjct: 464 GSIVYGMLCTRPDVSYALSATSRYQGYVPSPGESHWIVVKNILKYLRRTKDMFLVYGGQE 523

Query: 230 MLCVKGFTDASFQTDIDDFRSQSGFIFVLNGGA 132
            + V G+TDASFQTD DDFR Q GF+F LNGGA
Sbjct: 524 EIVVNGYTDASFQTDKDDFRLQFGFVFCLNGGA 556


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  226 bits (575), Expect = 4e-57
 Identities = 105/193 (54%), Positives = 142/193 (73%)
 Frame = -3

Query: 581  RMIGLSQNSYIDRVLKRFNMENSKKGFLPMSHGIKLSKTQGPKTPDELNRMSRIPYASAI 402
            RMIGLSQ  YID +L RFNM+ SKKGFLP  HGI LSK Q PKTP+E+  M  +PYASA+
Sbjct: 1006 RMIGLSQALYIDTILNRFNMQGSKKGFLPFRHGIVLSKDQSPKTPEEIESMKAVPYASAV 1065

Query: 401  GSIMYAMICTRPDVSYALSMTSRYQANPGNDHWTAVKNVLKYLKRTKENFLMYGGEEMLC 222
            GS+MYAM+CTRPD+ +A+ M SR+Q+NPG +HWTAVK+++KYLKRT++  L++  E ++ 
Sbjct: 1066 GSLMYAMLCTRPDIYFAVGMVSRFQSNPGREHWTAVKHIIKYLKRTRDYMLVFQSENLVP 1125

Query: 221  VKGFTDASFQTDIDDFRSQSGFIFVLNGGAVSWKSAKQSTIADSTXXXXXXXXXXXXXEV 42
            + G+TD+ FQ+D D  +S SG +FVL GGA+SW+S KQ+ +AD T             E 
Sbjct: 1126 I-GYTDSDFQSDQDSRKSTSGNVFVLGGGAISWRSIKQTCVADFTMEAEYVAASEAAKEA 1184

Query: 41   VWIKKFISELGVV 3
            VW++ F+ +LGVV
Sbjct: 1185 VWLRNFLLDLGVV 1197