BLASTX nr result
ID: Achyranthes22_contig00023597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00023597
(4539 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1846 0.0
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 1770 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1745 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1743 0.0
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1735 0.0
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1691 0.0
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 1691 0.0
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1688 0.0
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 1674 0.0
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1667 0.0
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 1647 0.0
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 1631 0.0
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 1621 0.0
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 1619 0.0
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 1618 0.0
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 1613 0.0
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 1608 0.0
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 1607 0.0
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 1606 0.0
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 1605 0.0
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 1846 bits (4781), Expect = 0.0
Identities = 939/1395 (67%), Positives = 1099/1395 (78%), Gaps = 47/1395 (3%)
Frame = -2
Query: 4406 DNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDP 4227
D IQFTK+PYIED PR+IESI+F++FS +EI K +EV+V+RGVYYDA +KPI NGLLDP
Sbjct: 3 DGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDP 62
Query: 4226 KMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILI 4047
+MGP N+ +G CATC F DCPGH G LTLALPV+N+GY+ +I+DILKCICKSCS +L+
Sbjct: 63 RMGPANK-NGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLL 121
Query: 4046 PESECKDLLKKMRNTKLDSLQKTELRKRTIKKC----SSKMEVQCLRCGYVNGKVKKGKT 3879
E KD LKKMR+ K+++L+K EL K+ ++KC SSK V+C RCGY+NG VKK +
Sbjct: 122 DEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVS 181
Query: 3878 ALQIVHSRPK-QDKNREESGGPSPC------------LISPLDALLLFRKMLSQDCELLY 3738
L I+H R K D + EE +++P+ L LF++M+ +DC+LL
Sbjct: 182 VLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLN 241
Query: 3737 INDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSN 3558
+ +RPEKL++TNI VPP+ +RPSV +DGG QSNEND+TERLKRIIQANA LHQ LQ+ +
Sbjct: 242 LAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGS 301
Query: 3557 SSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
+SK L WDYLQ+EVAQYINSDVR A Q +PLSGFVQRLKGKQGRFRGNLSGKRVE
Sbjct: 302 TSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 361
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
+TGRTVISPDPNLKITEVA+P+LMA IL+YPE V+HHNIEKLRQC+ NGP KYPGAK +
Sbjct: 362 YTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIR 421
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
P+G + L F GRKR ADELK+GYIV RHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW
Sbjct: 422 YPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 481
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNG ILVASTQ
Sbjct: 482 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 541
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLTSSFLITRKDTFYDRA FSLMCSYMGDGM+++D+PTPA++KP+ELWTGKQLFN+LLR
Sbjct: 542 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLR 601
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
PHA +RVY+NL V EK Y K + ETMCP+DGFVYFRNSELISGQLGK TLGNG
Sbjct: 602 PHANVRVYLNLTVMEKTYNKRRGK------ETMCPSDGFVYFRNSELISGQLGKATLGNG 655
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GLFSVL+RDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG LLN+QK+ I
Sbjct: 656 NKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIE 715
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
EGY C LI+ +N+GKL L PGC+AAQTLEA+IT LN+IRE VCM+ELHWRNSPL
Sbjct: 716 EGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPL 775
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQM+ACVGQQ+VGGRRAPDGFIDR+LPHFP+KSKTP+AKGFVA+SF
Sbjct: 776 IMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSF 835
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
Y+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMK LEDL++ YD TVRN+NG+IV
Sbjct: 836 YTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIV 895
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYD 1578
QF YGDDGMDPA+MEG +GFPL+F RL KV+ATCPAG + LS ++ E + KRL +++
Sbjct: 896 QFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHN 954
Query: 1577 TST-GCSDAXXXXXXXXXXXXXKR-----------------------------KCYVSEQ 1488
TS GCSDA ++ ++ +
Sbjct: 955 TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSK 1014
Query: 1487 QLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPR 1308
QL+VFLD CI+R + K GEPGTQMTLKTFHFAGVASMNVTLGVPR
Sbjct: 1015 QLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 1074
Query: 1307 IKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASII 1128
IKEIIN +K+ISTPII A LE ++ + A+ VKG+IE+T LGQVAKSIK+V+TS A I
Sbjct: 1075 IKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIA 1134
Query: 1127 VKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAH 948
V LDME I AS+L I++ IV+E I L R K + ++KVLD KL V P DR H
Sbjct: 1135 VALDMEGIQASQLSIDSNIVRESI---LRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIH 1191
Query: 947 FALHRLKNKLPTVVVKGVDTIERAIIADEEGKKGKLNLIVEGTGLREVMGILGIDGRKTE 768
F LH LKN LPTVVVKG++T+ERA+I + K K NL+VEGTGL+ VMG G+ GR+T
Sbjct: 1192 FELHALKNLLPTVVVKGIETVERAVI--NKDNKVKYNLLVEGTGLQTVMGTEGVIGRETT 1249
Query: 767 SNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVG 588
SNHIIEVQQTLGIEAAR CII EI+ M SH M +DIRHMMLLAD+MTF+GEVL +TR G
Sbjct: 1250 SNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFG 1309
Query: 587 IAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRT 408
I KM +S+LMLASFEKTADHLFN SV+GR++KIEGVSECIIMG+PMQ+GTGILK+RQ R
Sbjct: 1310 IQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQ-RL 1368
Query: 407 DSLPALKYASEPIFA 363
+P L Y +PI +
Sbjct: 1369 QQVPELSYGLDPIIS 1383
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 1770 bits (4585), Expect = 0.0
Identities = 912/1398 (65%), Positives = 1078/1398 (77%), Gaps = 53/1398 (3%)
Frame = -2
Query: 4397 QFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKMG 4218
+FTK+PYIED PR+I+SI+FSM S +EI K +EV+V++ +YYD + +PI GLLDP+MG
Sbjct: 4 KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63
Query: 4217 PPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPES 4038
P N+ SG CATC F DCPGHYG L+LALPV+N+GY+ +ILDILKCICKSCS I++ E
Sbjct: 64 PANK-SGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEK 122
Query: 4037 ECKDLLKKMRNTKLDSLQKTELRKRTIKKCS---SKMEVQCLRCGYVNGKVKKGKTALQI 3867
CKD LK+MR+ K+D+L+K ++ K +KKCS S V+C RCGYVNG VKK L I
Sbjct: 123 LCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKAVAMLGI 182
Query: 3866 VHSRPKQDKNREE--------------SGGPSPCLISPLDALLLFRKMLSQDCELLYIND 3729
+H R K + N E S + +++P+ L LF++M DCELLY++D
Sbjct: 183 IHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSD 242
Query: 3728 RPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSNSSK 3549
RPEKLIITNI+VPP+P+RPSVI+DG QSNENDITERLKRIIQANA L Q L E + + K
Sbjct: 243 RPEKLIITNIAVPPIPIRPSVIMDGS-QSNENDITERLKRIIQANASLRQELVETNAAFK 301
Query: 3548 LLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTG 3369
L W+ LQVEVAQYINSDVR + Q +KPLSGFVQR+KGK GRFRGNLSGKRVE+TG
Sbjct: 302 CLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYTG 361
Query: 3368 RTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEPN 3189
RTVISPDPNLKITEVA+P+ MA ILTYPE V++HNIEKLRQCVRNGP KYPGA+ V P+
Sbjct: 362 RTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRYPD 421
Query: 3188 GDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL 3009
G + L RKR+ADELKFG +V RHLEDGD+VLFNRQPSLHRMSIMCHRARIMPWRTL
Sbjct: 422 GSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTL 481
Query: 3008 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDFL 2829
RFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNG ILVASTQDFL
Sbjct: 482 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFL 541
Query: 2828 TSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLRPHA 2649
TSSFLITRKD FYDRA FSL+CSYMGDGM++ID+PTPA+LKPIELWTGKQLF++LLRPHA
Sbjct: 542 TSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPHA 601
Query: 2648 QLRVYVNLMVKEKIYCKLEDRKTTCRE---ETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
+RVY+NL+VKE+ Y K ++ +E ETMCP+DGFVY RNSELI GQLGK TLGNG
Sbjct: 602 SVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLGNG 661
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GL+SVL+RDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGK LN++K I+
Sbjct: 662 NKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALTIS 721
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
Y++CD I++FNEGKL PG DAAQTLEA +T LN IR+ GKVCMKELHWRNSPL
Sbjct: 722 GDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSPL 781
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGS INISQM+ACVGQQ+VGGRRAP+GFIDRSLPHF + SKTP AKGFVANSF
Sbjct: 782 IMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSF 841
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
YSGLTATEFFFHTM GREGLVDTAVKTA+TGYMSRRL+K LEDL++HYD TVRN++G IV
Sbjct: 842 YSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCIV 901
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYD 1578
QF YGDDGMDPA MEG GFPL+F+RL KV+ATCP L + + +++ ++L+ +D
Sbjct: 902 QFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKHD 961
Query: 1577 TSTGCSDA---------XXXXXXXXXXXXXKRKCY---------------VSEQQLKVFL 1470
+ CS+A C +S++QL+VF+
Sbjct: 962 PAGVCSEAFKKSLKGFLKSQTNELDRVMKLVNNCAQKSEILEKVGHKISGISDRQLEVFV 1021
Query: 1469 DACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN 1290
CI+R RSK GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN
Sbjct: 1022 STCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIIN 1081
Query: 1289 ASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDME 1110
A+K+ISTP+I A+LE D +IAQ VKG+IEKT+LGQVAKSIK+V+TS AS+++ LDME
Sbjct: 1082 AAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDME 1141
Query: 1109 KINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRL 930
I + L I+A IVKE I L + K + +VKVLD KL V P ADR HF LH L
Sbjct: 1142 IILDAELYIDANIVKESI---LQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFELHSL 1198
Query: 929 KNKLPTVVVKGVDTIERAIIAD---------EEGKKGKLNLIVEGTGLREVMGILGIDGR 777
KN LP VVVKG+ T+ER ++ D EE L+VEGTGL+ VMGI GIDGR
Sbjct: 1199 KNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGIEGIDGR 1258
Query: 776 KTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVT 597
+T SNH++E++Q LGIEAAR CII EI + M+ H M +D RHMMLLADVMTF+GEVL +T
Sbjct: 1259 RTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRGEVLGIT 1318
Query: 596 RVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQ 417
R GI KM +SILMLASFE+TADHLFN +VNGR++KIEGV+ECIIMG+PMQIGTGILK+ Q
Sbjct: 1319 RFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTGILKVIQ 1378
Query: 416 RRTDSLPALKYASEPIFA 363
R D P L+Y +P+ +
Sbjct: 1379 -RVDPPPMLRYGPDPVLS 1395
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 1745 bits (4520), Expect = 0.0
Identities = 907/1402 (64%), Positives = 1067/1402 (76%), Gaps = 55/1402 (3%)
Frame = -2
Query: 4403 NIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPK 4224
+I FTKQPYIED PR+IESI+FSM S +EI K +EV+V++G YY + + PI GLLDP+
Sbjct: 11 SIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPR 70
Query: 4223 MGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIP 4044
MGP N+ S CATC F +CPGHYG LTLALPV+N+GY+ +ILDILKCICK CS +L+
Sbjct: 71 MGPANK-SCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLE 129
Query: 4043 ESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKME--VQCLRCGYVNGKVKKGKTALQ 3870
E CKD LKKMRN K+++L+KT+L K +KKCS+ V+C RCGY+NG VKK L
Sbjct: 130 EKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLG 189
Query: 3869 IVHSRPKQDKNREESGGP-------------SPCLISPLDALLLFRKMLSQDCELLYIND 3729
I+H R K ++ +E + +++P++ L LF++M DCE+LY+++
Sbjct: 190 IIHDRSKVTESLQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSE 249
Query: 3728 RPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSNSSK 3549
RPEKLIITNI+VPP+ +RPSVI+DG QSNENDITERLKRIIQ NA L Q L E +++ K
Sbjct: 250 RPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRIIQTNASLQQELVEANSAFK 308
Query: 3548 LLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTG 3369
L W+ LQVEVAQYINSDVR + Q +PLSGFVQRLKGKQGRFRGNLSGKRVE+TG
Sbjct: 309 SLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 368
Query: 3368 RTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEPN 3189
RTVISPDPNLKITEVA+P+ MA ILTYPE V+ HNIEKLRQC++NGP KYPGA+ + P+
Sbjct: 369 RTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYPD 428
Query: 3188 GDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL 3009
G + L R ++A ELK G IV RHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL
Sbjct: 429 GTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL 488
Query: 3008 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDFL 2829
RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG ILVASTQDFL
Sbjct: 489 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFL 548
Query: 2828 TSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLRPHA 2649
TSSFLITRKDTFYDRA FSLMC YMGDGM+ +D+PTPA+LKP+ELWTGKQLF++L+RPHA
Sbjct: 549 TSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPHA 608
Query: 2648 QLRVYVNLMVKEKIYCK---LEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
+RVYVNL VKEK Y + R ETMCPNDGFVYFRNSELISGQLGK TLGNG
Sbjct: 609 NMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNG 668
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GL+SVL+RDY AHA + CMNRLAKLSARWIGNHGFSIGIDDVQP K L+++K I+
Sbjct: 669 NKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLIS 728
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
E Y C+ IK +NEGKL L PGCDAAQTLEA IT LN IRE AGK CM L WRNSPL
Sbjct: 729 ENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPL 788
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQMVACVGQQ+VGGRRAP+GFIDRSLPHFP+K+K P AKGFVANSF
Sbjct: 789 IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSF 848
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
YSGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+K LEDL++ YD +VRN+ G IV
Sbjct: 849 YSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIV 908
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYD 1578
QF YGDDGMDPA MEG G PL+F+RL KV+ATCP LS ++SEI+ K+L+ Y
Sbjct: 909 QFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYG 968
Query: 1577 TSTGCSDA--------------------------XXXXXXXXXXXXXKRKCYVSEQQLKV 1476
+ CS+A + ++E+QL+V
Sbjct: 969 KES-CSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEV 1027
Query: 1475 FLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1296
F+ C +R K GEPGTQMTLKTFHFAGVASMN+T GVPRIKEI
Sbjct: 1028 FIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEI 1087
Query: 1295 INASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLD 1116
IN +K+ISTPII A+LE + + A+ VKG+IEKTLLGQVAKSIK+VMTS ASI++ LD
Sbjct: 1088 INGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALD 1147
Query: 1115 MEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALH 936
ME I + LCINA IVKE I + + K + ++KVLD KL + P D+ HF L+
Sbjct: 1148 METIQDAHLCINADIVKESI---VQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELY 1204
Query: 935 RLKNKLPTVVVKGVDTIERAIIADEE---------GKKGKLNLIVEGTGLREVMGILGID 783
LKN LP V+VKG+ T+ER +IA++E G+K K L+VEGTGL+ VMG GID
Sbjct: 1205 SLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGID 1264
Query: 782 GRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLA 603
G KT+SNHI EVQQTLGIEAAR CII EI + M++H M +D RHMMLLAD+MTF+GEVL
Sbjct: 1265 GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLG 1324
Query: 602 VTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKI 423
+TR GI KM +S+LMLASFEKTADHLFN SVNGR+++IEGVSECIIMG+PM +GTGILKI
Sbjct: 1325 ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKI 1384
Query: 422 RQRRTDSL-PALKY-ASEPIFA 363
RQR D++ P LKY A +PI +
Sbjct: 1385 RQR--DAVPPMLKYGAPDPIMS 1404
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 1743 bits (4513), Expect = 0.0
Identities = 891/1389 (64%), Positives = 1063/1389 (76%), Gaps = 53/1389 (3%)
Frame = -2
Query: 4421 MLRPHDNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIAN 4242
M R +++Q TKQPYIED PR+I+SIKFS+FS +EI K++EVEV+ G+YY++ KKPI N
Sbjct: 1 MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN 60
Query: 4241 GLLDPKMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSC 4062
GLLDP+MGPPN+ SG C TC F +CPGHYG L LALPV+N+GY+G+++DILKCICK C
Sbjct: 61 GLLDPRMGPPNK-SGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCC 119
Query: 4061 SHILIPESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKMEVQ----CLRCGYVNGKV 3894
S IL+ + E +D+LKKMRN + + L+K+EL KR +K+C++ Q C +CGY+NG V
Sbjct: 120 SSILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGYMNGMV 179
Query: 3893 KKGKTALQIVHSRPKQ----------DKNREESGGPSPCLISPLDALLLFRKMLSQDCEL 3744
KK L+I H + + DK + P I P LF+ M +DCEL
Sbjct: 180 KK--LQLKITHEQGNRILDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCEL 237
Query: 3743 LYINDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEP 3564
LY++DRPEKL++T+I VPP+ +RPSV VDGG QSNENDITERLKRIIQANA LHQ + +
Sbjct: 238 LYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD- 296
Query: 3563 SNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKR 3384
S+ K L+ W LQ+EVAQYINSDVR QP +PLSGF QRLKGKQGRFRGNLSGKR
Sbjct: 297 SSPVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKR 356
Query: 3383 VEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKF 3204
VE+TGRTVISPDPNLKITEVA+P+LMA ILTYPE V+ HNIEKLRQCVRNGP KYPGAKF
Sbjct: 357 VEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKF 416
Query: 3203 VIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 3024
+ P+G++ L F RKR ADELKFGYIV RHLEDGD+VLFNRQPSLHRMSIM HRARIM
Sbjct: 417 IRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 476
Query: 3023 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVAS 2844
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+G ILVAS
Sbjct: 477 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVAS 536
Query: 2843 TQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNIL 2664
TQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD M+ D+P+PA +KP+ELWTGKQLF++L
Sbjct: 537 TQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVL 596
Query: 2663 LRPHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLG 2484
LRP++++RVYVNL + EK Y + + ETMC +DGFVYFRNSELISGQLGK TLG
Sbjct: 597 LRPYSKMRVYVNLTLTEKSY--------SGKGETMCSSDGFVYFRNSELISGQLGKATLG 648
Query: 2483 NGNKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYN 2304
NGNK GL+SVL+RDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDV PG+ L +QK
Sbjct: 649 NGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGE 708
Query: 2303 INEGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNS 2124
I+ Y++C+ I FNEGKL + PGCDAAQTLEA++T LN++R+ GK+CMK L WRNS
Sbjct: 709 IHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNS 768
Query: 2123 PLIMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVAN 1944
PLIMSQCGSKGSPINISQM+ACVGQQ+VGGRRAPDGFIDRSLPHFP KSK P AKGFVA+
Sbjct: 769 PLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAH 828
Query: 1943 SFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGT 1764
SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMK LEDLAV+YD TVRN++
Sbjct: 829 SFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASAC 888
Query: 1763 IVQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSD 1584
IVQF YGDDGMDP++ME +G PL+F RL KV+ATCP G + LS +E+ EI+N+RLS
Sbjct: 889 IVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSY 948
Query: 1583 YDTST--GCSDAXXXXXXXXXXXXXKRKCY------------------------------ 1500
+D + GCS+A
Sbjct: 949 HDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISG 1008
Query: 1499 VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTL 1320
++++QL+VFL+ CI+R K GEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1009 ITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068
Query: 1319 GVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIK 1140
GVPRIKEIINA+KKI+TPII AKL + A+ +K +IEKTLLGQVAKS+K+V+ S
Sbjct: 1069 GVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRL 1128
Query: 1139 ASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADR 960
ASI + LDME I S+LCI+AY VK+ I L ++ K + +KVL+ KL V P A++
Sbjct: 1129 ASIAISLDMETIQVSQLCIDAYTVKQSI---LQTSKIKLKEHQIKVLNPRKLEVFPQANK 1185
Query: 959 HDAHFALHRLKNKLPTVVVKGVDTIERAIIADEEGKKGK-------LNLIVEGTGLREVM 801
HF LHRLKNKLP VVVKG+ T++RA++ E+ K K L+VEGTGL VM
Sbjct: 1186 DKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVM 1245
Query: 800 GILGIDGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTF 621
GI G+DGR T+SNHI+EVQ TLGIEAAR II EI M SH M +D+RHMMLLAD+MT+
Sbjct: 1246 GIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTY 1305
Query: 620 KGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIG 441
KGEVL +TR G+ KMK+S+LMLASFEKT DHLFN SVNGR++KIEGV+ECIIMG+PM IG
Sbjct: 1306 KGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIG 1365
Query: 440 TGILKIRQR 414
TG+ K+RQR
Sbjct: 1366 TGMFKLRQR 1374
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 1735 bits (4493), Expect = 0.0
Identities = 893/1404 (63%), Positives = 1066/1404 (75%), Gaps = 53/1404 (3%)
Frame = -2
Query: 4421 MLRPHDNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIAN 4242
M R +++Q TKQPYIED PR+I+SIKFS+FS +EI K +EVEV+ G+YY++ KKPI N
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 4241 GLLDPKMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSC 4062
GLLDP+MGPPN+ +G C TC F +CPGHYG L LALPV+N+GY+G+++DILKCICK C
Sbjct: 61 GLLDPRMGPPNK-NGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCC 119
Query: 4061 SHILIPESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKMEVQ----CLRCGYVNGKV 3894
S IL+ + E +D+LKKMRN + + L+K+EL K+ +K+C++ Q C +CGY+NG V
Sbjct: 120 SSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMV 179
Query: 3893 KKGKTALQIVHSRPKQ----------DKNREESGGPSPCLISPLDALLLFRKMLSQDCEL 3744
KK L+I H + + DK + P + P LF+ M +DCEL
Sbjct: 180 KK--LQLKITHEQGNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCEL 237
Query: 3743 LYINDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEP 3564
LY++DRPEKL++T+I VPP+ +RPSV VDGG QSNENDITERLKRIIQANA LHQ + +
Sbjct: 238 LYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD- 296
Query: 3563 SNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKR 3384
S+ K L+ W LQ+EVAQYINSDVR Q +PLSGF QRLKGKQGRFRGNLSGKR
Sbjct: 297 SSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKR 356
Query: 3383 VEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKF 3204
VE+TGRTVISPDPNLKITEVA+P+LMA ILTYPE V+ HNIEKLRQCVRNGP KYPGAKF
Sbjct: 357 VEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKF 416
Query: 3203 VIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 3024
+ P+G + L F RKR ADELKFGYIV RHLEDGD+VLFNRQPSLHRMSIM HRARIM
Sbjct: 417 IRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 476
Query: 3023 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVAS 2844
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+G ILVAS
Sbjct: 477 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVAS 536
Query: 2843 TQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNIL 2664
TQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD M+ D+P+PA +KP+ELWTGKQLF++L
Sbjct: 537 TQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHML 596
Query: 2663 LRPHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLG 2484
LRP++++RVYVNL V EK Y + + ETMCP+DGFVYFRNSELISGQLGK TLG
Sbjct: 597 LRPYSKMRVYVNLTVTEKSY--------SGKGETMCPSDGFVYFRNSELISGQLGKATLG 648
Query: 2483 NGNKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYN 2304
NGNK GL+SVL+RDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDV PG+ L +QK
Sbjct: 649 NGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGE 708
Query: 2303 INEGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNS 2124
I+ Y++C+ I FNEGKL + PGCDAAQTLEA++T LN++R+ GK+CMK L WRNS
Sbjct: 709 IHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNS 768
Query: 2123 PLIMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVAN 1944
PLIMSQCGSKGSPINISQM+ACVGQQ+VGGRRAPDGFIDRSLPHFP KSK P AKGFVA+
Sbjct: 769 PLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAH 828
Query: 1943 SFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGT 1764
SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMK LEDLAV+YD TVRN++
Sbjct: 829 SFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASAC 888
Query: 1763 IVQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSD 1584
IVQF YGDDGMDP+QME +G PL+F RL KV+ATCP G + LS +E+ EI+N+RLS
Sbjct: 889 IVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSY 948
Query: 1583 YDTST--GCSDAXXXXXXXXXXXXXKRKCY------------------------------ 1500
+D + GCS+A
Sbjct: 949 HDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISG 1008
Query: 1499 VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTL 1320
++++QL+VFL+ CI+R K GEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1009 ITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068
Query: 1319 GVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIK 1140
GVPRIKEIINA+KKI+TPII KL + + A+ +K +IEKTLLGQVAKS+K+V+ S
Sbjct: 1069 GVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRL 1128
Query: 1139 ASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADR 960
ASI + LDME I S+LCI+AY VK+ I L ++ K + +KVL+ KL V P A++
Sbjct: 1129 ASIAISLDMETIQVSQLCIDAYTVKQSI---LQTSKIKLKEHQIKVLNPRKLEVFPQANK 1185
Query: 959 HDAHFALHRLKNKLPTVVVKGVDTIERAIIADEEGKKGK-------LNLIVEGTGLREVM 801
HF LHRLKNKLP VVVKG+ T++RA++ E+ K K L+VEGTGL VM
Sbjct: 1186 DKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVM 1245
Query: 800 GILGIDGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTF 621
GI G+DGR T+SNHI+EVQ TLGIEAAR II EI M SH M +D+RHMMLLAD+MT+
Sbjct: 1246 GIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTY 1305
Query: 620 KGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIG 441
KGEVL +TR G+ KMK+S+LMLASFEKT DHLFN SVNGR++KIEGV+ECIIMG+PM IG
Sbjct: 1306 KGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIG 1365
Query: 440 TGILKIRQRRTDSLPALKYASEPI 369
TG+ K+RQR L Y +PI
Sbjct: 1366 TGMFKLRQRVEQ--VELNYQPDPI 1387
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 1691 bits (4380), Expect = 0.0
Identities = 892/1417 (62%), Positives = 1049/1417 (74%), Gaps = 70/1417 (4%)
Frame = -2
Query: 4403 NIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPK 4224
+I FTKQPYIED PR+IESI+FSM S +EI K +EV+V++G YY + + PI GLLDP+
Sbjct: 11 SIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPR 70
Query: 4223 M---------------GPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILD 4089
M GP N+ S CATC F +CPGHYG LTLALPV+N+GY+ +ILD
Sbjct: 71 MEKIIFLQRLFFHGFQGPANK-SCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILD 129
Query: 4088 ILKCICKSCSHILIPESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKME--VQCLRC 3915
ILKCICK CS +L+ E CKD LKKMRN K+++L+KT+L K +KKCS+ V+C RC
Sbjct: 130 ILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRC 189
Query: 3914 GYVNGKVKKGKTALQIVHSRPKQDKNREESGGP-------------SPCLISPLDALLLF 3774
GY+NG VKK L I+H R K ++ +E + +++P++ L LF
Sbjct: 190 GYINGMVKKAVAVLGIIHDRSKVTESLQEFASAITHTKESKAAVNVATYILNPVNVLFLF 249
Query: 3773 RKMLSQDCELLYINDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQAN 3594
++M DCE+LY+++RPEKLIITNI+VPP+ +RPSVI+DG QSNENDITERLKRIIQ N
Sbjct: 250 KRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRIIQTN 308
Query: 3593 ACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQG 3414
A L Q L E +++ K L W+ LQVEVAQYINSDVR + Q +PLSGFVQRLKGKQG
Sbjct: 309 ASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQG 368
Query: 3413 RFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRN 3234
RFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+ MA ILTYPE V+ HNIEKLRQC++N
Sbjct: 369 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQN 428
Query: 3233 GPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRM 3054
GP KYPGA+ + P+G + L R ++A ELK G IV RHLEDGDVVLFNRQPSLHRM
Sbjct: 429 GPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRM 488
Query: 3053 SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT 2874
SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT
Sbjct: 489 SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT 548
Query: 2873 PKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIEL 2694
PKNG ILVASTQDFLTSSFLITRKDTFYDRA FSLMC YMGDGM+ +D+PTPA+LKP+EL
Sbjct: 549 PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVEL 608
Query: 2693 WTGKQLFNILLRPHAQLRVYVNLMVKEKIYCK---LEDRKTTCREETMCPNDGFVYFRNS 2523
WTGKQLF++L+RPHA +RVYVNL VKEK Y + R ETMCPNDGFVYFRNS
Sbjct: 609 WTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNS 668
Query: 2522 ELISGQLGKTTLGNGNKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDV 2343
ELISGQLGK TLG CMNRLAKLSARWIGNHGFSIGIDDV
Sbjct: 669 ELISGQLGKATLG----------------------CMNRLAKLSARWIGNHGFSIGIDDV 706
Query: 2342 QPGKLLNEQKTYNINEGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIA 2163
QP K L+++K I+E Y C+ IK +NEGKL L PGCDAAQTLEA IT LN IRE A
Sbjct: 707 QPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDA 766
Query: 2162 GKVCMKELHWRNSPLIMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPK 1983
GK CM L WRNSPLIMSQCGSKGSPINISQMVACVGQQ+VGGRRAP+GFIDRSLPHFP+
Sbjct: 767 GKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPR 826
Query: 1982 KSKTPEAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLA 1803
K+K P AKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+K LEDL+
Sbjct: 827 KAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLS 886
Query: 1802 VHYDMTVRNSNGTIVQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSL 1623
+ YD +VRN+ G IVQF YGDDGMDPA MEG G PL+F+RL KV+ATCP LS
Sbjct: 887 IQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSP 946
Query: 1622 AEMSEIINKRLSDYDTSTGCSDA--------------------------XXXXXXXXXXX 1521
++SEI+ K+L+ Y + CS+A
Sbjct: 947 QQVSEIVEKQLAAYGKES-CSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEE 1005
Query: 1520 XXKRKCYVSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGV 1341
+ ++E+QL+VF+ C +R K GEPGTQMTLKTFHFAGV
Sbjct: 1006 VTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1065
Query: 1340 ASMNVTLGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIK 1161
ASMN+T GVPRIKEIIN +K+ISTPII A+LE + + A+ VKG+IEKTLLGQVAKSIK
Sbjct: 1066 ASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIK 1125
Query: 1160 LVMTSIKASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLA 981
+VMTS ASI++ LDME I + LCINA IVKE I + + K + ++KVLD KL
Sbjct: 1126 IVMTSRLASIVIALDMETIQDAHLCINADIVKESI---VQTPKIKLKQQHIKVLDFRKLE 1182
Query: 980 VTPDADRHDAHFALHRLKNKLPTVVVKGVDTIERAIIADEE---------GKKGKLNLIV 828
+ P D+ HF L+ LKN LP V+VKG+ T+ER +IA++E G+K K L+V
Sbjct: 1183 IFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLV 1242
Query: 827 EGTGLREVMGILGIDGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHM 648
EGTGL+ VMG GIDG KT+SNHI EVQQTLGIEAAR CII EI + M++H M +D RHM
Sbjct: 1243 EGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHM 1302
Query: 647 MLLADVMTFKGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECI 468
MLLAD+MTF+GEVL +TR GI KM +S+LMLASFEKTADHLFN SVNGR+++IEGVSECI
Sbjct: 1303 MLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECI 1362
Query: 467 IMGVPMQIGTGILKIRQRRTDSL-PALKY-ASEPIFA 363
IMG+PM +GTGILKIRQR D++ P LKY A +PI +
Sbjct: 1363 IMGIPMPLGTGILKIRQR--DAVPPMLKYGAPDPIMS 1397
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 1691 bits (4378), Expect = 0.0
Identities = 883/1397 (63%), Positives = 1058/1397 (75%), Gaps = 49/1397 (3%)
Frame = -2
Query: 4406 DNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDP 4227
+ I FTK+P++ED PR+I+++KFS S +EI KI+EV+V++G YYD+ KKPI GLLDP
Sbjct: 7 EGITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDP 66
Query: 4226 KMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILI 4047
+MGP N+ S +CATC F DCPGHYG L LALPVFN+GY+ +I++ILKCICK C+ IL+
Sbjct: 67 RMGPANK-SLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILL 125
Query: 4046 PESECKDLLKKMRNTKLDSLQKTELRK-RTIKKCSSKMEVQCLRCGYVNGKVKKGKTALQ 3870
E K LKKMR++K L K + K R IK CS V C RCGY+NG VKK +L
Sbjct: 126 DEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKV--VNCPRCGYINGSVKKLPASLT 183
Query: 3869 IVHSRPK--------------QDKNREESGGPSPCLISPLDALLLFRKMLSQDCELLYIN 3732
I+H K + K+ + S +++P L LF++ML +DCELLY+
Sbjct: 184 IIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVA 243
Query: 3731 DRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSNSS 3552
+RPEKLI+TN+ VPP+ +RPSV++D SNENDITERLK IIQANA L Q LQE + SS
Sbjct: 244 ERPEKLIMTNVVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLRQELQESTFSS 302
Query: 3551 KLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFT 3372
K LD WD LQ EVAQ+INSDVR QPTK L+GFVQRLKGK GRFRGNLSGKRVE+T
Sbjct: 303 KFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEYT 362
Query: 3371 GRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEP 3192
GRTVISPDPNLKI+EVA+P+ MA ILTYPE V HHNIEKLRQCVRNGP KYPGA+ +
Sbjct: 363 GRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRD 422
Query: 3191 NGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 3012
G L RKR ADEL+ G IV RHLEDGD+VLFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 423 GGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 482
Query: 3011 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDF 2832
LRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGV+NNLCTPKNG ILVASTQDF
Sbjct: 483 LRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQDF 542
Query: 2831 LTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLRPH 2652
LTSSFLITRKDTFYDR+TFSL+CSY+GDGM+ ID+PTPA++KP+ELW+GKQLF+I+LRPH
Sbjct: 543 LTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRPH 602
Query: 2651 AQLRVYVNLMVKEKIYC---KLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGN 2481
A +RVYVNL VKE+ Y K++D+K + T+CPNDGFVYFRNSELISGQ+GK TLGN
Sbjct: 603 ANMRVYVNLTVKERNYTEDKKIKDKKIEWK--TLCPNDGFVYFRNSELISGQVGKVTLGN 660
Query: 2480 GNKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNI 2301
GNK GLFSVL+RDY AHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP ++L +K I
Sbjct: 661 GNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETI 720
Query: 2300 NEGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSP 2121
+EGYRECD I++FN+GKL L+ GCDAAQTLE +IT LN +R+ AGKVCM+ LHWRNSP
Sbjct: 721 SEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSP 780
Query: 2120 LIMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANS 1941
LIMSQCGSKGS INISQMVACVGQQ+VGGRR P+GFIDRSLPHFP+KSKTP AKGFVANS
Sbjct: 781 LIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANS 840
Query: 1940 FYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTI 1761
FYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSR+LMK LEDL +HYD TVRN+ G+I
Sbjct: 841 FYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSI 900
Query: 1760 VQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMK-LSLAEMSEIINKRLSD 1584
VQF YGDDGMDPA MEG G PL+FERL K +A CP D + LS +++S++++++LS+
Sbjct: 901 VQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSE 960
Query: 1583 YDTS---------TGCS-------------------DAXXXXXXXXXXXXXKRKCYVSEQ 1488
+D S G S + +R ++ +
Sbjct: 961 FDMSRLAEKGVFEVGFSADFVESLQSFIKDNAKLTEEGFTDEHSQNLKKFGQRISGITRK 1020
Query: 1487 QLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPR 1308
QL VFL+ C++R SK GEPGTQMTLKTFHFAGVASMNVTLGVPR
Sbjct: 1021 QLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 1080
Query: 1307 IKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASII 1128
+KEI+N +KKISTPII A LE D + A+ VKG+IEKT LGQVAKSIK+VMTS AS++
Sbjct: 1081 VKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVV 1140
Query: 1127 VKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHDA 951
+ LDM++I + L I+A IVKE I L + K ++K+LD KL V P D DR
Sbjct: 1141 ITLDMKRIQDAHLNIDANIVKESI---LRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKI 1197
Query: 950 HFALHRLKNKLPTVVVKGVDTIERAIIADEEGKKGKLNLIVEGTGLREVMGILGIDGRKT 771
HF LH LKN LPTVVVKG+ T++R +I+ ++ K K L+VEGTG REVMG+ GIDGRKT
Sbjct: 1198 HFQLHYLKNLLPTVVVKGIKTVDRVVIS-KDTKAEKFRLLVEGTGFREVMGVEGIDGRKT 1256
Query: 770 ESNHIIEVQQTLGIEAARSCIIREIKKVM-QSHSMDVDIRHMMLLADVMTFKGEVLAVTR 594
SNHI EV+ TLGIEAAR I++EIK M +H M++DIRHMMLLAD+MT G +L + R
Sbjct: 1257 VSNHIHEVRDTLGIEAARESIVKEIKYTMVDTHGMNIDIRHMMLLADMMTATGHILGINR 1316
Query: 593 VGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQR 414
GI+KM +S+LMLASFE+TAD LF SV GR++ I GVSE IIMG+P+QIGTG++K++QR
Sbjct: 1317 FGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPIQIGTGMIKVKQR 1376
Query: 413 RTDSLPALKYASEPIFA 363
P L + + PI +
Sbjct: 1377 LDP--PELPHGTSPILS 1391
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 1688 bits (4372), Expect = 0.0
Identities = 888/1395 (63%), Positives = 1045/1395 (74%), Gaps = 65/1395 (4%)
Frame = -2
Query: 4403 NIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPK 4224
+I +TKQPYIED PRRI+SI+FS S ++I K SE +V G YYDA KK I GLLD +
Sbjct: 7 DIIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTR 66
Query: 4223 MGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIP 4044
MG PN+ G C TC F DCPGH+G L L LPV+N+GY+ +ILDILKCICKSCS +L+
Sbjct: 67 MGAPNK-HGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVD 125
Query: 4043 ESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKME---VQCLRCGYVNGKVKKGKTAL 3873
E K LK+MRN + + L+K EL K +KKCSS V+CLRCGY+NG VKK + +
Sbjct: 126 EKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAGSVV 185
Query: 3872 QIVHSRPKQ-DKNREESG-------------GPSPCLISPLDALLLFRKMLSQDCELLYI 3735
I+H R K D EE G + +++P+ L LF++M+ +DCELLY+
Sbjct: 186 GIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYL 245
Query: 3734 NDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSNS 3555
RPEKLIIT I+VPP+ +RPSV +G QSNENDITERLK+IIQ NA L L E +
Sbjct: 246 QGRPEKLIITTIAVPPISIRPSVFTEGS-QSNENDITERLKQIIQFNAKLRLELLEGRRT 304
Query: 3554 S-KLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
K L WD LQ V YINSDVR+ L Q +PLSGFVQRL GKQGRFR NL+GKRVE
Sbjct: 305 GIKYLIGWDELQAVVTLYINSDVRIPLD-MQVGRPLSGFVQRLTGKQGRFRQNLAGKRVE 363
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
FTGRTVISPDPNLKITEVA+P+ MA ILTYPE V HHNIEKLRQCV NG KYPGA+ V
Sbjct: 364 FTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVT 423
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
P+G K L+ RKRIA+ELK G IVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA LLMGVQNNLCTPKNG ILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQ 543
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLTSSFLITRKDTFYDRA FSLMCSYM DGM+++D+PTP+VLKPIELWTGKQLF++LLR
Sbjct: 544 DFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLR 603
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
PHA +RVYVNL++KEK Y + +++ ETMCPNDG+VYFRNSELISGQLGK TLGNG
Sbjct: 604 PHANVRVYVNLILKEKNYSR-PNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNG 662
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GL+S+L+RDYNA+AAA CMNRLAKLSARWIGNHGFSIGIDDVQPGK L ++K I+
Sbjct: 663 NKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTIS 722
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
GYR C+ LI +N G+L L GCDA QTLE +IT++LN++RE AG VCMKELHWRNSPL
Sbjct: 723 NGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPL 782
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQM+ACVGQQ+VGG RAPDGFIDRSLPHFP+KSKTP AKGFVANSF
Sbjct: 783 IMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSF 842
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
YSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL V YD TV+++ G IV
Sbjct: 843 YSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIV 902
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYD 1578
QF YGDDG+DPA MEG G PL+F+RL KV+ATC A D LS +++S I+ L ++
Sbjct: 903 QFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSLLLKHN 962
Query: 1577 TSTG--CSDAXXXXXXXXXXXXXKR-KCY------------------------------- 1500
+ CS++ KR +C
Sbjct: 963 GTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISKNTEKI 1022
Query: 1499 ------VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVA 1338
++E+QL+VFL C+ R K GEPGTQMTLKTFHFAGVA
Sbjct: 1023 AQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVA 1082
Query: 1337 SMNVTLGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKL 1158
SMN+T GVPRIKEIIN +K+ISTPII +LE +S ++ A+ +KG+I+KT+LGQVAKSIK+
Sbjct: 1083 SMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKSIKI 1142
Query: 1157 VMTSIKASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAV 978
VMTS AS+ V LDM+ I ++L ++A IV+E I + K +RK ++N VL+D KL V
Sbjct: 1143 VMTSRSASVKVTLDMKTIREAQLSLDANIVRELILET-PKIKRKLQRIN--VLEDGKLEV 1199
Query: 977 TPDADRHDAHFALHRLKNKLPTVVVKGVDTIERAIIA-----DEEGKKG--KLNLIVEGT 819
P DR+ HF LH LKN LP VVVKG+ T+ER +IA D E +G K N+ VEG
Sbjct: 1200 FPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPKYNMFVEGM 1259
Query: 818 GLREVMGILGIDGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLL 639
GL+ VMG G+DGRKT+SNHIIEVQ+TLGIEAAR CII EIK M+SH M +DIRHMMLL
Sbjct: 1260 GLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDIRHMMLL 1319
Query: 638 ADVMTFKGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMG 459
ADVMT +G VL +TR GI KM +S+LMLASFEKT+DHLFN SV G+++KIEGVSECIIMG
Sbjct: 1320 ADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVSECIIMG 1379
Query: 458 VPMQIGTGILKIRQR 414
+P+ IGTG+LKI+QR
Sbjct: 1380 IPVAIGTGVLKIQQR 1394
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 1674 bits (4334), Expect = 0.0
Identities = 871/1397 (62%), Positives = 1053/1397 (75%), Gaps = 49/1397 (3%)
Frame = -2
Query: 4406 DNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDP 4227
+ I FTK+P++ED PR+I+++KFSM S +EI K+ EV+V++G YYD+ KKPI GLLDP
Sbjct: 7 EGITFTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDP 66
Query: 4226 KMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILI 4047
+MGP N+ G CATC F DCPGHYG L LALPVFN+GY+GSI++ILKCICK C+ IL+
Sbjct: 67 RMGPANKSLG-CATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILL 125
Query: 4046 PESECKDLLKKMRNTKLDSLQKTELRK-RTIKKCSSKMEVQCLRCGYVNGKVKKGKTALQ 3870
E K LKKMR++K L K + K R IK CS V C RCGY+NG VKK +L
Sbjct: 126 DEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKV--VNCPRCGYINGSVKKLPASLI 183
Query: 3869 IVHSRPK--------------QDKNREESGGPSPCLISPLDALLLFRKMLSQDCELLYIN 3732
I+H K + K+ + + S +++P L LFRKML +DCELLY+
Sbjct: 184 IMHDCSKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKMLDEDCELLYVA 243
Query: 3731 DRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSNSS 3552
+RPEKLIITNI VPP+ +RPSV++D SNENDITERLK IIQANA L Q LQE S SS
Sbjct: 244 ERPEKLIITNIVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLRQELQESSVSS 302
Query: 3551 KLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFT 3372
K LD W+ LQ EVAQ+INS+VR Q TK L+GFVQRLKGK GRFRGNLSGKRVE+T
Sbjct: 303 KFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGKRVEYT 362
Query: 3371 GRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEP 3192
GRTVISPDPNLKI+EVA+P+LMASILTYPE V HHNIEKLRQCVRNGP KYPGA+ +
Sbjct: 363 GRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRD 422
Query: 3191 NGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 3012
G L RKR ADEL+ G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 423 GGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 482
Query: 3011 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDF 2832
LRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGVQNNLCTPKNG ILVASTQDF
Sbjct: 483 LRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDF 542
Query: 2831 LTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLRPH 2652
LTSSFL+TRKDTFYDR+ F+ +C+++GDG+++ID+PTPA++KP+ELW+GKQLF++LLRPH
Sbjct: 543 LTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLRPH 602
Query: 2651 AQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNGNK 2472
A +VYVNL VKEK Y KL+D+K + T+CPNDGFVYFRN+ELISGQ+GK TLGNGNK
Sbjct: 603 ANFKVYVNLTVKEKTYTKLDDKKRELK--TLCPNDGFVYFRNTELISGQIGKVTLGNGNK 660
Query: 2471 VGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNINEG 2292
GLFSVL+RDY AHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP ++L ++K ++EG
Sbjct: 661 DGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEG 720
Query: 2291 YRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIM 2112
Y++CD I++FN+GKL L+ GCDA QTLE +IT LN +R++AGKVCM+ LHWRNSPLIM
Sbjct: 721 YKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIM 780
Query: 2111 SQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYS 1932
SQCGSKGSPINISQMVACVGQQ+VGGRRAP+GF+DRSLPHFP +KTP AKGFVANSFYS
Sbjct: 781 SQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYS 840
Query: 1931 GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQF 1752
GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSR+LMK +EDL +HYD TVRN+ G+IVQF
Sbjct: 841 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQF 900
Query: 1751 FYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCP-AGRDMKLSLAEMSEIINKRLSDY-- 1581
YGDDGMDP MEG G PL+FERL K +A CP D LS +++ +++ ++LS++
Sbjct: 901 CYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSEFGV 960
Query: 1580 --------------------------DTSTGCSDAXXXXXXXXXXXXXKRKCYVSEQQLK 1479
D + + +R ++ QL+
Sbjct: 961 SREVEKGVLEVGFSADFVQSLQSFIKDNTKLTEETFTDDNSQILKKFGERISGITRAQLE 1020
Query: 1478 VFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1299
VFL+ C++R SK GEPGTQMTLKTFHFAGVASMNVTLGVPR+KE
Sbjct: 1021 VFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKE 1080
Query: 1298 IINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKL 1119
I+N +KKISTPII A LE + A+ VKG+IEKT LGQVAKSIK+V+TS AS+++ L
Sbjct: 1081 IMNGNKKISTPIITAILERTDCANTARIVKGRIEKTNLGQVAKSIKVVVTSRLASVVITL 1140
Query: 1118 DMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHDAHFA 942
DME+I + L I+A IVKE I + KA+ K + ++K+LD KL V P D DR HF
Sbjct: 1141 DMERIQDAHLNIDANIVKESILQT-KKAKLKPE--HIKILDVKKLRVVPQDGDRSKLHFQ 1197
Query: 941 LHRLKNKLPTVVVKGVDTIERAIIADEEG---KKGKLNLIVEGTGLREVMGILGIDGRKT 771
L+ LKN LP+VVVKG+ T +R +I+ EE K K L+VEGTG REVMG+ G+DG KT
Sbjct: 1198 LNYLKNLLPSVVVKGIKTADRVVISKEEDKITKAEKFKLLVEGTGFREVMGVEGVDGCKT 1257
Query: 770 ESNHIIEVQQTLGIEAARSCIIREIKKVM-QSHSMDVDIRHMMLLADVMTFKGEVLAVTR 594
SNHI EV+ TLGIEAAR CI++EIK VM +H M++D RHMMLLADVMT G +L + R
Sbjct: 1258 VSNHIHEVRDTLGIEAARECIVKEIKYVMVDTHGMNIDTRHMMLLADVMTATGHILGINR 1317
Query: 593 VGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQR 414
GI+KM +S+LMLASFE+TAD LF SV GR++ I GVSE IIMG+P+ IGTG++K++QR
Sbjct: 1318 FGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPITIGTGMIKVKQR 1377
Query: 413 RTDSLPALKYASEPIFA 363
LP L + + PI +
Sbjct: 1378 L--ELPDLPHGASPILS 1392
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 1667 bits (4316), Expect = 0.0
Identities = 885/1391 (63%), Positives = 1039/1391 (74%), Gaps = 68/1391 (4%)
Frame = -2
Query: 4331 MFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKMGPPNRGSGLCATCSAKFEDCPGH 4152
M S EI K +E +V G YYD+ +KPI GLLDP++GP + S C TC A F +CPGH
Sbjct: 1 MMSGAEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGH 60
Query: 4151 YGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPESECKDLLKKMRNTKLDSLQKTEL 3972
+G L L LPVFN+GY+ +ILDILKCICKSCS IL E CK LKKMRN +++ L+K+EL
Sbjct: 61 FGYLNLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSEL 120
Query: 3971 RKRTIKKCSSKME---VQCLRCGYVNGKVKKGKTALQIVHSRPK-----------QDKNR 3834
K+ +KKCSS V+C RCG +NG VKK + L I+H R K +
Sbjct: 121 VKKIVKKCSSMTSNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHT 180
Query: 3833 EESGGP---SPCLISPLDALLLFRKMLSQDCELLYINDRPEKLIITNISVPPMPLRPSVI 3663
+ES P + +++P+ L LF+++ +DCE+L + DRPEKLIITNI+VPP+ +RPSV
Sbjct: 181 KESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVF 240
Query: 3662 VDGGFQSNENDITERLKRIIQANACLHQGLQEPSNS-SKLLDDWDYLQVEVAQYINSDVR 3486
DG QSNENDITERLK+IIQANA L L E S +K LD WD LQ VA Y+NSDVR
Sbjct: 241 TDG-LQSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR 299
Query: 3485 VALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLM 3306
V + KPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVA+P+ M
Sbjct: 300 VPNNVEVG-KPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHM 358
Query: 3305 ASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFG 3126
A IL+YPE V+HHNIEKLRQ V NGP+KYPGA V P+G K L RK IA+EL FG
Sbjct: 359 ARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFG 418
Query: 3125 YIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNM 2946
IV RHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNM
Sbjct: 419 CIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNM 478
Query: 2945 HVPQTEEARTEALLLMGV-QNNLCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSL 2769
HVPQTEEARTEALLLMGV QNNLCTPKNG ILVASTQDFLTSSFLITR+DTFYDRA FSL
Sbjct: 479 HVPQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSL 538
Query: 2768 MCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLRPHAQLRVYVNLMVKEKIYCKLED 2589
MCSYM DGM++ID+PTPA+LKPIELWTGKQLF++LLRP+A +RVYVNL+V+EKIY K
Sbjct: 539 MCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSK--P 596
Query: 2588 RKTTCRE-ETMCPNDGFVYFRNSELISGQLGKTTLGNGNKVGLFSVLVRDYNAHAAAACM 2412
+K RE ETMCPNDGFVY RNSELISGQLGK TLGNGNK GL+S+L+RDYN HAAA CM
Sbjct: 597 KKGDKREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCM 656
Query: 2411 NRLAKLS--ARWIGNHGFSIGIDDVQPGKLLNEQKTYNINEGYRECDGLIKSFNEGKLTL 2238
NRLAKL ARWIGNHGFSIGIDDVQPGK L + K I+ GY++CD LI+ +NEGKL L
Sbjct: 657 NRLAKLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLL 716
Query: 2237 MPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPINISQMVAC 2058
PGCDA QTLE++IT+KLN++RE AG VCMKELHWRNSPLIMSQCGSKGS INISQMVAC
Sbjct: 717 KPGCDATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVAC 776
Query: 2057 VGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFHTMGGREGL 1878
VGQQ+VGGRRAPDGFIDRSLPHFP+KSKTP AKGFVANSFYSGL ATEFFFHTM GREGL
Sbjct: 777 VGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGL 836
Query: 1877 VDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPAQMEGAEGF 1698
VDTAVKTADTGYMSRRL+K LEDL++ YD TVRN++G IVQF YGDDG+DPA MEG G
Sbjct: 837 VDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGV 896
Query: 1697 PLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTSTG--CSDAXXXXXXXXXX 1524
PL+ +RL KV+ATCP + LS ++S+++ L +D + G CS+A
Sbjct: 897 PLNLDRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLG 956
Query: 1523 XXXKR------------------------------------KCY-VSEQQLKVFLDACIT 1455
KR K + VSE+Q++VF+ CI
Sbjct: 957 SHAKRLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCIN 1016
Query: 1454 RLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKI 1275
R K GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN +KKI
Sbjct: 1017 RYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKI 1076
Query: 1274 STPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINAS 1095
STPII A+LE ++ + A+ KG+I+KT+LGQVAKSIK+VMTS AS+++ LDM+ I +
Sbjct: 1077 STPIITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNA 1136
Query: 1094 RLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLP 915
+L ++A IVKE I L R K ++KVLD KL V P DR HF LH LKN LP
Sbjct: 1137 QLSLDANIVKEAI---LRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLP 1193
Query: 914 TVVVKGVDTIERAIIADE--EGKKG-----KLNLIVEGTGLREVMGILGIDGRKTESNHI 756
+++V+G+ T+ERA+IA + +GK N++VEG GL VMG G+DG KT SNH+
Sbjct: 1194 SIIVQGIKTVERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHV 1253
Query: 755 IEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKM 576
+EVQ+ LGIEAAR CII EI + M+ H M +DIRHMMLL D+MTFKGEVL +TR GI KM
Sbjct: 1254 MEVQKFLGIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKM 1313
Query: 575 KESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLP 396
+S+LMLASFEKTADHL++ +V GR++KIEGVSECIIMG+PMQIGTGILK+ Q+R D P
Sbjct: 1314 DKSVLMLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKV-QQRVDPPP 1372
Query: 395 ALKYASEPIFA 363
L Y S+ I +
Sbjct: 1373 VLNYGSDSIIS 1383
>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Cicer arietinum]
Length = 1399
Score = 1647 bits (4264), Expect = 0.0
Identities = 871/1403 (62%), Positives = 1043/1403 (74%), Gaps = 55/1403 (3%)
Frame = -2
Query: 4406 DNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDP 4227
+ + FTK+P+IED PR+I I +S S EI KI EV+V++G YYDA +KP A+GLLD
Sbjct: 7 EGLVFTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEADGLLDS 66
Query: 4226 KMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILI 4047
+MGP N+ S +CATC F DC GHYG L L PVFN+GY+ +++ ILKCICK C+ IL+
Sbjct: 67 RMGPANK-SLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGCAGILL 125
Query: 4046 PESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKMEVQCLRCGYVNGKVKKGKTALQI 3867
E K LKKMRN+KLD LQK +L + +K+ S ++C RCGY+NG VK ++ L+I
Sbjct: 126 DEDTRKKYLKKMRNSKLDELQKIQLLESIMKRFRSAKFIKCQRCGYINGIVKLTRSTLRI 185
Query: 3866 VH--SRPKQD------------KNREESGGPSPCLISPLDALLLFRKMLSQDCELLYIND 3729
VH S K D K + + + P LF KM +DC LLY+ +
Sbjct: 186 VHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCALLYLAE 245
Query: 3728 RPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSNSSK 3549
RPEKLIITNI+VPP+ +RPSVI+DG QSNENDITE+L++IIQANA LH+ L+E S+K
Sbjct: 246 RPEKLIITNIAVPPIVIRPSVIMDGS-QSNENDITEKLRKIIQANAALHKELEE---STK 301
Query: 3548 LLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTG 3369
++ LQ VAQYINSDV+ + Q +KPL+GFVQR+KGKQGRFR NLSGKRVE+TG
Sbjct: 302 FQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRVEYTG 361
Query: 3368 RTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEPN 3189
RTVISPDPNLKITEVA+P+ MA ILTYPE V HHNIEKLRQC+RNGP KYPGAK +
Sbjct: 362 RTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAG 421
Query: 3188 GDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL 3009
G +L RKR+ADEL+FG IV RHLEDGDVVLFNRQPSLHRMS+MCHRARIMPWRTL
Sbjct: 422 GTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTL 481
Query: 3008 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDFL 2829
RFNESVCNPYNADFDGDEMN+HVPQTEEARTEALLLM VQNNLCTPKNG ILVASTQDFL
Sbjct: 482 RFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFL 541
Query: 2828 TSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLRPHA 2649
TSSFLITRKDTFYDR+TFSL+CSYMGDGM+ ID+PTPA++KP+ELW+GKQLF+ILLRPHA
Sbjct: 542 TSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHA 601
Query: 2648 QLRVYVNLMVKEKIY-CKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNGNK 2472
+RVYVNL VKEK + KL+DRK + TMCPNDGFVYFRNSELISGQLGK TLGNGNK
Sbjct: 602 NVRVYVNLTVKEKTHNAKLDDRKREMK--TMCPNDGFVYFRNSELISGQLGKVTLGNGNK 659
Query: 2471 VGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNINEG 2292
GLFSVL+RDY AHAAA+CMNRLAK SARWIGNHGFSIGIDDVQP ++L +K I G
Sbjct: 660 DGLFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETITTG 719
Query: 2291 YRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIM 2112
Y ECDG I++FN+GKL L PGCDAAQTLEAKI QKLN +R+ KVCM+ LHWRNSPLIM
Sbjct: 720 YSECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPLIM 779
Query: 2111 SQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYS 1932
SQCGSKGSPINI QMVACVGQQ+VGG RA +GF+DRSLPHF KK+KTP KGFVANSF++
Sbjct: 780 SQCGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSFFT 839
Query: 1931 GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQF 1752
GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMK LEDL +HYD TVR++NG IVQF
Sbjct: 840 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIVQF 899
Query: 1751 FYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPA-GRDMKLSLAEMSEIINKRLSDYDT 1575
YGDDGMDP+ MEG G PL+F+RL K +A CP+ G D+ LS +++ E+I K+LS+
Sbjct: 900 CYGDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDGDDIILSSSDVCEVIRKKLSEVGM 959
Query: 1574 S---------------TGCSD---------------------AXXXXXXXXXXXXXKRKC 1503
S G SD R
Sbjct: 960 SKLVEKDASENDIMSVVGFSDDFIKSLQAFVKDNTKLTEAIAENDSKNLTNLKNFIPRIS 1019
Query: 1502 YVSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVT 1323
+S +QL+VFLD C++R R K GEPGTQMTLKTFHFAGVASMNVT
Sbjct: 1020 GISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 1079
Query: 1322 LGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSI 1143
LGVPRI EIIN +K I TPI+ A LE D + A+ VKG+IEKT LGQVAKSIK+VMTS
Sbjct: 1080 LGVPRIIEIINGAKDIKTPIMTAILERDDNANTARMVKGRIEKTNLGQVAKSIKVVMTSR 1139
Query: 1142 KASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPD-A 966
A++++ LDME+I + L I+A+ VKE I L A+ K NVKVLD KL V P +
Sbjct: 1140 SATVVISLDMERIQDAHLNIDAHTVKESI---LRTAKLKLKAENVKVLDIKKLQVYPRLS 1196
Query: 965 DRHDAHFALHRLKNKLPTVVVKGVDTIERAII-ADEEGKK-GKLNLIVEGTGLREVMGIL 792
R++ HF L+ LKN LP+VVVKGV T+ERA++ D++ KK K L+VEGTGL++V+GI
Sbjct: 1197 GRNEIHFQLNILKNLLPSVVVKGVKTVERAVLEIDKKDKKVEKFALLVEGTGLQQVLGIE 1256
Query: 791 GIDGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGE 612
G+DGRKT SNH++E+ LGIEAARS II +I+ M SH M +D+RH+MLLAD+MT +G+
Sbjct: 1257 GVDGRKTRSNHVMEMLNVLGIEAARSTIIDQIQYTMGSHGMSIDVRHIMLLADIMTVRGQ 1316
Query: 611 VLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGI 432
VL +TR GI KM S+LMLASFE + DHLF+ S+ GR + IEGVS+CIIMG P+++GTG+
Sbjct: 1317 VLGMTRHGIQKMGRSVLMLASFESSTDHLFDASMRGRGDPIEGVSDCIIMGKPIRVGTGM 1376
Query: 431 LKIRQRRTDSLPALKYASEPIFA 363
+ I+QR P L +PI +
Sbjct: 1377 IDIKQRLDP--PVLPKGIDPILS 1397
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 1631 bits (4224), Expect = 0.0
Identities = 852/1383 (61%), Positives = 1029/1383 (74%), Gaps = 37/1383 (2%)
Frame = -2
Query: 4400 IQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKM 4221
I+FTKQPYIED P +I+SI FS+FS EI K +EV+V+R YY++ KP+ GLLDP+M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRM 66
Query: 4220 GPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPE 4041
GPPN+ S +CATC A F++CPGH+G L L LPV+N+G++ ILDILKCICK CS+ILI E
Sbjct: 67 GPPNKKS-ICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDE 125
Query: 4040 SECKDLLKKMRNTKLDSLQKTELRKRTIKKCS---SKMEVQCLRCGYVNGKVKKGKTALQ 3870
+D LKKMRN K++ L+KTEL K +KKCS S+ + C CGY+NG VKK +
Sbjct: 126 KLYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMASQRIITCKNCGYLNGMVKKVAAQMG 185
Query: 3869 IV---HSRPKQ------------DKNREESGGPSPC--LISPLDALLLFRKMLSQDCELL 3741
I+ H R K RE +G +P ++ P L LF+ M +DCELL
Sbjct: 186 IIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDCELL 245
Query: 3740 YINDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPS 3561
YI RPE L I + VPP+P RPSV + GG QSNEND+TER+K+I+Q NA + L + +
Sbjct: 246 YIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILNQAT 304
Query: 3560 NSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRV 3381
S K + WD +Q EVAQYINS+VR + Q +KPLSG +QRLKGKQGRFR NLSGKRV
Sbjct: 305 TSPKNMQVWDTVQSEVAQYINSEVR-GIPNQPDSKPLSGILQRLKGKQGRFRANLSGKRV 363
Query: 3380 EFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFV 3201
E+TGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVRNGP KYPGA+ V
Sbjct: 364 EYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARSV 423
Query: 3200 IEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 3021
P+G + L RKRIADEL G IV RHLE+GD VLFNRQPSLHRMSIMCHRARIMP
Sbjct: 424 RYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMP 483
Query: 3020 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVAST 2841
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNG ILVAST
Sbjct: 484 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAST 543
Query: 2840 QDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILL 2661
QDFLTSS+LITRKDTFYDRA FSL+CSYMGD M+ ID+PTP +LKPIELWTGKQ+F++LL
Sbjct: 544 QDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSVLL 603
Query: 2660 RPHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGN 2481
RP+A +RVYV L VKEK + K + +ETMC NDG+VYFRNSELISGQLGK TLGN
Sbjct: 604 RPNASVRVYVTLNVKEKNFKKGK------YDETMCTNDGWVYFRNSELISGQLGKATLGN 657
Query: 2480 GNKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNI 2301
GNK GL+SVL+RDYN+HAAA CMNRLAKLSARWIG HGFS+GIDDVQPG+ L E++ I
Sbjct: 658 GNKDGLYSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKII 717
Query: 2300 NEGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSP 2121
N+GY +C I+ FNEG+L L G D A++LE+ IT LN IRE GK+CM+ LHWRNSP
Sbjct: 718 NKGYEDCGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSP 777
Query: 2120 LIMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANS 1941
LIMSQCGSKGSPINISQMVACVGQQ V G RAPDGFIDRSLPHFP+ SKTPEAKGFVANS
Sbjct: 778 LIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANS 837
Query: 1940 FYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTI 1761
FYSGLTATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMK LEDL VHYD TVRN++G I
Sbjct: 838 FYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCI 897
Query: 1760 VQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATC-PAGRDMKLSLAEMSEIINKRLSD 1584
+QF YGDDGMDP MEG +G PL+F+RL K++ATC P LS E+ + + L
Sbjct: 898 LQFTYGDDGMDPVLMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSEELLQKFEEELVR 957
Query: 1583 YDTSTGCSDAXXXXXXXXXXXXXKRKCY----------VSEQQLKVFLDACITRLRSKXX 1434
+DTS C+DA R V+++Q++VF+ C++R R K
Sbjct: 958 HDTSRVCTDAFVKSLREFLSLLGLRSTSPSQVFYKASGVTDKQIEVFVKICVSRYREKTI 1017
Query: 1433 XXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMA 1254
GEPGTQMTLKTFHFAGVASMN+T GVPRI EIINASK ISTP+I A
Sbjct: 1018 EAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISA 1077
Query: 1253 KLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAY 1074
+LE+ + A+ VKG+IEKT LGQVA+SI+++MTS AS+ + LD ++I + L I+ +
Sbjct: 1078 ELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKRIEEACLSISPW 1137
Query: 1073 IVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVKGV 894
VK I L R K + N+++LD L +TP D+ HF LH LKN LP ++V G+
Sbjct: 1138 SVKTSI---LKTPRIKLNDDNIRILDS-GLDITPVGDKSGIHFGLHNLKNVLPNIIVNGI 1193
Query: 893 DTIERAIIADEEGKKGKLN------LIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLG 732
T+ER ++A++ KK +++ L VEGT L VMG GI+GR T SN+I+EV +TLG
Sbjct: 1194 KTVERVVVAEDTDKKKQIDGKKRWKLFVEGTNLLAVMGTPGINGRTTTSNNIVEVSKTLG 1253
Query: 731 IEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLA 552
IEAAR+ II EI VM +H M +DIRHMMLLADVMT++GEVL + R GI KM +S+LM A
Sbjct: 1254 IEAARTTIIDEIGSVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQA 1313
Query: 551 SFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEP 372
SFE+T DHLF+ +V+G+ + IEGV+EC+IMG+PM++GTGILK+ Q RTD LP LKY ++P
Sbjct: 1314 SFERTGDHLFSAAVSGKVDNIEGVTECVIMGIPMKLGTGILKVLQ-RTDDLPKLKYGADP 1372
Query: 371 IFA 363
I +
Sbjct: 1373 IIS 1375
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 1621 bits (4198), Expect = 0.0
Identities = 847/1382 (61%), Positives = 1020/1382 (73%), Gaps = 36/1382 (2%)
Frame = -2
Query: 4400 IQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKM 4221
I+FTKQPYIED P +I+SI FS+ S E+ K +EV+V++ YY+ KP NGLLD +M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARM 66
Query: 4220 GPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPE 4041
GPPN+ S +C TC F++CPGHYG L L LPV+N+G+ ILDILKCICK CS++L+ E
Sbjct: 67 GPPNKKS-ICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDE 125
Query: 4040 SECKDLLKKMRNTKLDSLQKTELRKRTIKKCS---SKMEVQCLRCGYVNGKVKK--GKTA 3876
+D L+KMRN K++ L+KTEL K +KKCS S+ + C +CGY+NG VKK +
Sbjct: 126 KLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIAAQMG 185
Query: 3875 LQIVHSRPK--------------QDKNREESGGPSPCLISPLDALLLFRKMLSQDCELLY 3738
+ I H R K K + P ++ P L LF+ M +DCELLY
Sbjct: 186 IGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCELLY 245
Query: 3737 INDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSN 3558
I RPE LI T + VPP+ +RPSV++ GG +SNENDITERLK IIQ NACLH+ L +P+
Sbjct: 246 IAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQPTT 304
Query: 3557 SSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
S K + WD +Q EVA+YINS+VR +Q Q PLSG +QRLKGKQGRFR NLSGKRVE
Sbjct: 305 SPKNMQVWDTVQSEVAKYINSEVR-GVQNQPEKTPLSGLLQRLKGKQGRFRANLSGKRVE 363
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
+TGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVRNGP KYPGA+ V
Sbjct: 364 YTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
P+G + L RKRIADEL G IV RHLE+GD VLFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNG ILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLT+SFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP +LKPIELWTGKQLF++LLR
Sbjct: 544 DFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSVLLR 603
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
P+A +RVYV L VKEK + K E +ETMC NDG+VYFRNSELISGQLGK TLGNG
Sbjct: 604 PNASVRVYVTLNVKEKNFKKGEHGF----DETMCVNDGWVYFRNSELISGQLGKATLGNG 659
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GL+S+L+RDYN+HAAA CMNRLAKLSARWIG HGFSIGIDDVQPG+ LN+++ +I
Sbjct: 660 NKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQ 719
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
GY +C I+ FN G L L G D A++LEA+IT LN IRE GK CM LHWRNSPL
Sbjct: 720 FGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPL 779
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQMVACVGQQ V G RAPDGFIDRSLPHFP+ SK+P AKGFVANSF
Sbjct: 780 IMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSF 839
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
YSGLTATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMK LEDL VHYD TVRN++G I+
Sbjct: 840 YSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCIL 899
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATC-PAGRDMKLSLAEMSEIINKRLSDY 1581
QF YGDDGMDPA MEG +G PL+F+RL K++ATC P LS E+S+ + L +
Sbjct: 900 QFTYGDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRH 959
Query: 1580 DTSTGCSDAXXXXXXXXXXXXXKRKCY----------VSEQQLKVFLDACITRLRSKXXX 1431
D S C+DA + V+++QL+VF+ C++R R K
Sbjct: 960 DKSRVCTDAFVKSLREFVSLLGVKSASTPQVLYKASGVTDKQLEVFVKICVSRYREKKIE 1019
Query: 1430 XXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMAK 1251
GEPGTQMTLKTFHFAGVASMN+T GVPRI EIINASK ISTP+I A+
Sbjct: 1020 AGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAE 1079
Query: 1250 LEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAYI 1071
LE+ + A+ VKG+IEKT LGQVA+SI+++MTS AS+ + LD + I + L I+ +
Sbjct: 1080 LENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSISPWS 1139
Query: 1070 VKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVKGVD 891
VK I L R K + +++VL D L +TP D+ HF LH LKN LP ++V G+
Sbjct: 1140 VKNSI---LKTPRIKLNDNDIRVL-DTGLDITPVVDKSRTHFNLHNLKNVLPNIIVNGIK 1195
Query: 890 TIERAIIADEEGK------KGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLGI 729
T+ER ++A++ K K + L VEGT L VMG GI+GR T SN+++EV +TLGI
Sbjct: 1196 TVERVVVAEDMDKNKQIDGKTRWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGI 1255
Query: 728 EAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLAS 549
EAAR+ II EI VM +H M +DIRHMMLLADVMT++GEVL + R GI KM +S+LM AS
Sbjct: 1256 EAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQAS 1315
Query: 548 FEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEPI 369
FE+T DHLF+ +++G+ + IEGV+EC+IMG+PM++GTGILK+ Q RTD LP LKY ++PI
Sbjct: 1316 FERTGDHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQ-RTDDLPKLKYGADPI 1374
Query: 368 FA 363
+
Sbjct: 1375 IS 1376
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 1619 bits (4193), Expect = 0.0
Identities = 837/1399 (59%), Positives = 1034/1399 (73%), Gaps = 46/1399 (3%)
Frame = -2
Query: 4421 MLRPHDNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIAN 4242
M RP + ++ TK+P+IED RRI+SI+FSMFS E+ + +EV+V+ Y+ E KP+ N
Sbjct: 1 MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60
Query: 4241 GLLDPKMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSC 4062
GLLD +MG N+ G C+TC F +CPGH+G L LALPVFN+G+ ILD+LKCICKSC
Sbjct: 61 GLLDTRMGAANK-LGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119
Query: 4061 SHILIPESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKMEVQCLRCGYVNGKVKKGK 3882
S +L+ E + + LKKMRN K D LQK+ + K+ KC +C CG++NG KKG+
Sbjct: 120 SRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLS---RCPWCGFINGVAKKGR 176
Query: 3881 TALQIVHS------------RPKQDKNREESGGPSPCLISPLDALLLFRKMLSQDCELLY 3738
L I+H R +E+ + ++ P L LF++M +DCELL
Sbjct: 177 AGLIILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDCELLN 236
Query: 3737 INDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSN 3558
+ DRPEKLI+T I+VPP+P+RPSV V GG SNE+ IT LK I N+ L + LQ
Sbjct: 237 LGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQ 296
Query: 3557 SSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
K D W +LQ++V +YINSD ++Q G VQRLKGK GRFRGNLSGKR E
Sbjct: 297 FMKCFDCWQHLQLQVVEYINSDAPSLPESQH-----RGLVQRLKGKTGRFRGNLSGKRTE 351
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
+TGRTVISPDPNL+ITEVA+P+LMA +LTYPE V+++NIEKLRQC+RNGP K+PGA F+I
Sbjct: 352 YTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFII 411
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
+P+G K L + R+ A +LK+G +V RHLEDGD+VLFNRQPSLHRMSIM HRARIMPW
Sbjct: 412 QPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 471
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGVQNNLCTPKNG ILVASTQ
Sbjct: 472 RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 531
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLTSSFL+TRKD FYDR++FSL+CSY+GD ME ID+PTPA++KPIELWTGKQLF++L+R
Sbjct: 532 DFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVR 591
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
P+A +V++NL VKEKIY + +T E MCPNDGFVYFRNSEL+SGQ+GK TLGNG
Sbjct: 592 PNACTKVFLNLTVKEKIY--KTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNG 649
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK G+FS LVRDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQPG+ LN++K I+
Sbjct: 650 NKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKID 709
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
GY++C LI S+++G L L PGC+AAQTLE IT+ LNEIRE AGKVCM LHWRNSPL
Sbjct: 710 GGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPL 769
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQMVACVGQQ+VGGRRAP+GFIDR+LPHFP SKTP AKGFVANSF
Sbjct: 770 IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSF 829
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
Y+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+V YD TVRN++G IV
Sbjct: 830 YTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIV 889
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYD 1578
QF YGDDGMDPA+MEG +G PL+ ++L KV ATCP LS E+ +I+N +LS++D
Sbjct: 890 QFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHD 949
Query: 1577 TST--GCS-----------------------------DAXXXXXXXXXXXXXKRKCYVSE 1491
S+ GCS D +S
Sbjct: 950 ASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISV 1009
Query: 1490 QQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVP 1311
+QL+VFLD C++R K GEPGTQMTLKTFHFAGVASMNVTLGVP
Sbjct: 1010 KQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1069
Query: 1310 RIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASI 1131
RIKEIINA+KKISTPII A+L + + A+ VKG +EK +LG+VA++IK+V+ S + ++
Sbjct: 1070 RIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNL 1129
Query: 1130 IVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHD 954
+VKLDM++I A + I+A V+ I N K + K++ +V+V+D KL + P D+
Sbjct: 1130 VVKLDMQRIEALHMGISADSVQLSILNH-PKIKLKSE--HVRVIDKSKLRIYPAGIDKSK 1186
Query: 953 AHFALHRLKNKLPTVVVKGVDTIERAIIAD--EEGKKGKLNLIVEGTGLREVMGILGIDG 780
+ LH LK+ LP V+VKG+ T+ERA+I++ EE K + L+VEGT L VMG G+D
Sbjct: 1187 LLYELHHLKSMLPKVIVKGIPTVERAVISETGEENDK-RYKLLVEGTNLLAVMGTPGVDA 1245
Query: 779 RKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAV 600
KT+SNHI+EV +TLGIEAAR II EI+ M+SH M++D RHMMLLAD+MT+KGE+L +
Sbjct: 1246 MKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGI 1305
Query: 599 TRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIR 420
TR GIAKMK S+LMLASFEKTA+HLFN S +GRE++IEGVSECIIMG+PMQ+GTGILK+R
Sbjct: 1306 TRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVR 1365
Query: 419 QRRTDSLPALKYASEPIFA 363
Q R D LP KY +PI A
Sbjct: 1366 Q-RLDHLPEFKYQPDPILA 1383
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 1618 bits (4191), Expect = 0.0
Identities = 847/1382 (61%), Positives = 1020/1382 (73%), Gaps = 36/1382 (2%)
Frame = -2
Query: 4400 IQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKM 4221
I++TK+PYIED +I+SI FSM S E+ K +EV+V++ YYD KP GLLDP+M
Sbjct: 7 IEYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGLLDPRM 66
Query: 4220 GPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPE 4041
GPPN+ S +C TC F++CPGHYG L L LPV+NIGY ILDILKCICK CS++L+ E
Sbjct: 67 GPPNKKS-ICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSNMLLDE 125
Query: 4040 SECKDLLKKMRNTKLDSLQKTELRKRTIKKCS---SKMEVQCLRCGYVNGKVKK--GKTA 3876
+D L+KMRN K++ L+KTEL K +KKCS S+ + C +CGY+NG VKK +
Sbjct: 126 KLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIPAQMG 185
Query: 3875 LQIVHSRPK--------------QDKNREESGGPSPCLISPLDALLLFRKMLSQDCELLY 3738
+ I H R K K ++ P ++ P L LF+ M +DCELLY
Sbjct: 186 IGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKDCELLY 245
Query: 3737 INDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSN 3558
I RPE LIIT + VPP+ +RPSV+V GG QSNEND++ RLK+IIQ NA LH+ L +P+
Sbjct: 246 IAHRPENLIITCMLVPPLSIRPSVMV-GGSQSNENDLSARLKQIIQDNASLHRILSQPTT 304
Query: 3557 SSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
S+K + WD +Q EVA+YINS+VR +Q Q +KP+SG +QRLKGKQGRFR NLSGKRVE
Sbjct: 305 SAKNMQVWDTVQSEVAKYINSEVR-GVQNQPDSKPMSGILQRLKGKQGRFRANLSGKRVE 363
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
+TGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVRNGP KYPGA+ V
Sbjct: 364 YTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
P+G + L RKRIADEL G IV RHLE+GD VLFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNG ILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLTSSFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP VLKPIELWTGKQ+F++LLR
Sbjct: 544 DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSVLLR 603
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
P+A +RVYV L VKEK + K +ETMC NDG+VYFRNSELISGQLGK TLGNG
Sbjct: 604 PNASVRVYVTLNVKEKNFKK----GNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNG 659
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GL+S+L+RDYN+HAAA CMNRLAKLSARWIG HGFSIGIDDVQPG+ L+ Q+ I
Sbjct: 660 NKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQ 719
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
GY +C +I++FN G L L G D A+TLEA IT LN IRE GK CM LHWRNSPL
Sbjct: 720 SGYDDCHSIIENFNRGNLQLKAGLDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPL 779
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQMVACVGQQ V G RAPDGFIDRSLPHFP+ SK+P AKGFVANSF
Sbjct: 780 IMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSF 839
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
YSGLTATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMK LEDL VHYD TVRN++G I+
Sbjct: 840 YSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCIL 899
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATC-PAGRDMKLSLAEMSEIINKRLSDY 1581
QF YGDDGMDPA MEG +G PL+F RL K++ATC P LS E+S+ + L +
Sbjct: 900 QFTYGDDGMDPALMEGKDGAPLNFNRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRH 959
Query: 1580 DTSTGCSDAXXXXXXXXXXXXXKRKCY----------VSEQQLKVFLDACITRLRSKXXX 1431
D + C+DA + V+++QL+VF+ C++R R K
Sbjct: 960 DKNRVCTDAFVKSLRDFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVSRYREKKIE 1019
Query: 1430 XXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMAK 1251
GEPGTQMTLKTFHFAGVASMN+T GVPRI EIINASK ISTP+I A+
Sbjct: 1020 AGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAE 1079
Query: 1250 LEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAYI 1071
LE+ + A+ VKG+IEKT LGQVA+SI+++MTS AS+ + LD + I + L I+ +
Sbjct: 1080 LENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSISPWS 1139
Query: 1070 VKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVKGVD 891
VK I L R K +++VL D L +TP D+ HF LH LKN LP+++V G+
Sbjct: 1140 VKNSI---LKTPRIKLTDNDIRVL-DTGLDITPVVDKSRTHFNLHNLKNVLPSIIVNGIK 1195
Query: 890 TIERAIIADEEGK------KGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLGI 729
T+ER ++A++ K K + L VEGT L VMG GI+GR T SN+++EV +TLGI
Sbjct: 1196 TVERVVVAEDMDKNKQIDGKKRWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGI 1255
Query: 728 EAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLAS 549
EAAR+ II EI VM +H M +DIRHMMLLADVMT++GEVL + R GI KM +S+LM AS
Sbjct: 1256 EAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQAS 1315
Query: 548 FEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEPI 369
FE+T DHLF+ +++G+ + IEGV+EC+IMG+PM++GTGILK+ Q RTD LP LKY ++PI
Sbjct: 1316 FERTGDHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQ-RTDDLPKLKYGADPI 1374
Query: 368 FA 363
+
Sbjct: 1375 IS 1376
>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1376
Score = 1613 bits (4177), Expect = 0.0
Identities = 849/1382 (61%), Positives = 1019/1382 (73%), Gaps = 36/1382 (2%)
Frame = -2
Query: 4400 IQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKM 4221
I+FTK+PYIED P +I+SI FS+ S E+ K +EV+V+ YD KP NGLLDP+M
Sbjct: 7 IEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRM 66
Query: 4220 GPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPE 4041
GPPN+ S +C TC F++CPGHYG L L LPV+N+GY ILDILKCICK CS++L+ E
Sbjct: 67 GPPNKKS-ICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDE 125
Query: 4040 SECKDLLKKMRNTKLDSLQKTELRKRTIKKCS---SKMEVQCLRCGYVNGKVKK--GKTA 3876
+D L+KMRN +++ L+KTEL K +KKCS S+ + C +CGY+NG VKK +
Sbjct: 126 KLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIAAQFG 185
Query: 3875 LQIVHSRPK-------QDKNREESGGPSPCLISPLDALL-------LFRKMLSQDCELLY 3738
+ I H R K + K+ S I+PL +L LF++M +DCELLY
Sbjct: 186 IGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDCELLY 245
Query: 3737 INDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSN 3558
I RPE LIIT + VPP+ +RPSV++ GG QSNEND+T RLK+II NA LH+ L +P++
Sbjct: 246 IAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKILSQPTS 304
Query: 3557 SSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
S K + WD +Q+EVA+YINS+VR Q Q PLSG +QRLKGK GRFR NLSGKRVE
Sbjct: 305 SPKNMQVWDTVQIEVARYINSEVR-GCQNQPEEHPLSGILQRLKGKGGRFRANLSGKRVE 363
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
FTGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVRNGP KYPGA+ V
Sbjct: 364 FTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
P+G + L RKRIADEL G IV RHL++GDVVLFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNG ILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLTSSFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP +LKPIELWTGKQ+F++LLR
Sbjct: 544 DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSVLLR 603
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
P+A +RVYV L VKEK + K E +ETMC NDG+VYFRNSELISGQLGK TLGNG
Sbjct: 604 PNASIRVYVTLNVKEKNFKKGEHG----FDETMCINDGWVYFRNSELISGQLGKATLGNG 659
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GL+S+L+RDYN+HAAA CMNRLAKLSARWIG HGFSIGIDDVQPG+ L++++ +I
Sbjct: 660 NKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQ 719
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
GY +C I+ FN G L L G D A++LEA+IT LN IRE GK CM LHWRNSPL
Sbjct: 720 FGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPL 779
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQMVACVGQQ V G RAPDGFIDRSLPHFP+ SK+P AKGFVANSF
Sbjct: 780 IMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSF 839
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
YSGLTATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMK LEDL VHYD TVRN++G I+
Sbjct: 840 YSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCIL 899
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATC-PAGRDMKLSLAEMSEIINKRLSDY 1581
QF YGDDGMDPA MEG +G PL+F RL KV+ATC P LS E+S+ + L +
Sbjct: 900 QFTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELVRH 959
Query: 1580 DTSTGCSDAXXXXXXXXXXXXXKRKCY----------VSEQQLKVFLDACITRLRSKXXX 1431
D S C+DA + V+++QL+VF+ C+ R R K
Sbjct: 960 DKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVFRYREKKIE 1019
Query: 1430 XXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMAK 1251
GEPGTQMTLKTFHFAGVASMN+T GVPRI EIINASK ISTP+I A+
Sbjct: 1020 AGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAE 1079
Query: 1250 LEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAYI 1071
LE+ + A+ VKG+IEKT LGQVA+SI+++MTS AS+ + LD + I + L I +
Sbjct: 1080 LENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSITPWS 1139
Query: 1070 VKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVKGVD 891
VK I L R K + +++VL D L +TP D+ AHF LH LKN LP ++V G+
Sbjct: 1140 VKNSI---LKTPRIKLNDNDIRVL-DTGLDITPVVDKSRAHFNLHNLKNVLPNIIVNGIK 1195
Query: 890 TIERAIIADEEGK------KGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLGI 729
T+ER ++A++ K K K L VEGT L VMG GI+GR T SN+++EV +TLGI
Sbjct: 1196 TVERVVVAEDMDKSKQIDGKTKWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGI 1255
Query: 728 EAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLAS 549
EAAR+ II EI VM +H M +DIRHMMLLADVMT++GEVL + R GI KM +S+LM AS
Sbjct: 1256 EAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQAS 1315
Query: 548 FEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEPI 369
FE+T DHLF+ + +G+ + IEGV+EC+IMG+PM++GTGILK+ Q RTD LP LKY +PI
Sbjct: 1316 FERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQ-RTDDLPKLKYGPDPI 1374
Query: 368 FA 363
+
Sbjct: 1375 IS 1376
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 1608 bits (4163), Expect = 0.0
Identities = 837/1380 (60%), Positives = 1017/1380 (73%), Gaps = 52/1380 (3%)
Frame = -2
Query: 4400 IQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKM 4221
+Q TKQPYIED RRIESI FS S +E+ K + VEV++G YYDA KKP++NGLLD +M
Sbjct: 1 LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60
Query: 4220 GPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPE 4041
GPPN+ S +C TC F++CPGHYG L LALPV+N+GY+ +I+DILKCICK+CS +L+ E
Sbjct: 61 GPPNKRS-VCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEE 119
Query: 4040 SECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKME----VQCLRCGYVNGKVKKGKTAL 3873
E L+KMRN +L+ L+KT+L K+ +K+C+SK +C RCG++NG VK+ +
Sbjct: 120 KEHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAKCPRCGHINGMVKRAPYKV 179
Query: 3872 QIVHSRPKQDKNRE-ESGGPSPCL-----ISPLDALLLFR---KMLSQDCELLYINDRPE 3720
R + E +S GPS S LDAL +FR ML +DCELLYI+DRPE
Sbjct: 180 MYDRGRVIDSQMEECQSAGPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIHDRPE 239
Query: 3719 KLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSNSSKLLD 3540
KL++TNI VPP +RPSV VDGG QSNENDITERLK II+ANA L Q L E + K +
Sbjct: 240 KLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYKKGVT 299
Query: 3539 DWDYLQVEVAQYINSDVR-VALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRT 3363
W+ LQ+EVAQYINSD R + L +KPLSGFVQRLKGKQGRFRGNLSGKRVE+TGRT
Sbjct: 300 SWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRT 359
Query: 3362 VISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEPNGD 3183
VISPDPNLKITEVAVP+LMA ILTYPE V+H NI +LR+CVR GP +YPGAKF+ +P+G
Sbjct: 360 VISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQPDGT 419
Query: 3182 KKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRF 3003
+ L F RK AD LK+G IV RHL+DGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRF
Sbjct: 420 EISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRF 479
Query: 3002 NESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDFLTS 2823
NESVCNPYNADFDGDEMNMHVPQTEE+R EA++LMGVQNNLCTPKNG +LVASTQDFLTS
Sbjct: 480 NESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQDFLTS 539
Query: 2822 SFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLRPHAQL 2643
SFLITRKDTFYDR+ FSL+C+++ DG+ +D+P PAV+KP+ELWTGKQ+F++LLRP
Sbjct: 540 SFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRPDKDR 599
Query: 2642 RVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNGNKVGL 2463
+V+VNL V EKIY K ETMCP DGFV RNSELISGQLGK TLGNG+K GL
Sbjct: 600 KVFVNLTVAEKIYVK--------SGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGL 651
Query: 2462 FSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNINEGYRE 2283
+S+L+RDY AHAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG +LN +K I++ Y +
Sbjct: 652 YSILLRDYGAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQ 711
Query: 2282 CDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQC 2103
C I+S+ GKL L+PGC+ A+TLEAKIT LN+IR+ +VCM L WRNSPLIMSQC
Sbjct: 712 CIRYIESYKSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQC 771
Query: 2102 GSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLT 1923
GSKGSPINI QMVACVGQQ+VGGRRAP+GF+DR+LPHF + +K P+AKGFV NSFY+GL
Sbjct: 772 GSKGSPINICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLL 831
Query: 1922 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYG 1743
TEFFFHTMGGREGLVDTAVKTADTGYMSRRL+K LEDL+V YD TVRN++G IVQF YG
Sbjct: 832 PTEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYG 891
Query: 1742 DDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRL------SDY 1581
DDG+DPAQME GFPL+FERL K +ATCP+ L ++ IIN+ + SD
Sbjct: 892 DDGLDPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIEENHSRSDI 951
Query: 1580 DTSTGCSD-----------------AXXXXXXXXXXXXXKRKCYV----------SEQQL 1482
CS+ + K YV ++QQL
Sbjct: 952 SEMEKCSETFEASLLRFLNKRVYPTGMLSEKLNSENISLQDKSYVQSVVSSTSGITQQQL 1011
Query: 1481 KVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1302
+VFL+ C R K GEPGTQMTLKTFHFAGVASMNVTLGVPRI+
Sbjct: 1012 EVFLNMCFARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIR 1071
Query: 1301 EIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVK 1122
EII+A+KKI TP+I +L+ A+ VKG+IEKTLLG++AKS+K+ + ASI++K
Sbjct: 1072 EIIDAAKKIKTPVITTELQRKDCGITARIVKGRIEKTLLGEIAKSMKVSEMTRTASIVIK 1131
Query: 1121 LDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFA 942
LD + I A++L I+AY VKE I L + K + ++VL+ KL V+ +A+R F
Sbjct: 1132 LDTKVIEAAQLFIDAYTVKESI---LLTPKMKLKEQQIRVLNRQKLTVSLEAERSKLEFE 1188
Query: 941 LHRLKNKLPTVVVKGVDTIERAIIADEEGKKG-----KLNLIVEGTGLREVMGILGIDGR 777
L+NKL VVVKG+ +ERAII DE K KL L+VEGTG V+GI G+D R
Sbjct: 1189 SWALQNKLKDVVVKGIKQVERAIIVDEANGKDPNQRKKLKLVVEGTGFLSVLGIQGVDAR 1248
Query: 776 KTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVT 597
T+SNHI+EV Q LGIE+AR II EI+ M H M +DIRHMMLLAD+MTFKGEVL +T
Sbjct: 1249 NTKSNHIMEVFQVLGIESARRQIIDEIQYTMSGHGMTIDIRHMMLLADLMTFKGEVLGIT 1308
Query: 596 RVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQ 417
R G+ KM++S+LMLASFE+TADHLFN VNGR ++IEGVSECI++G+PM+ GTG++KI+Q
Sbjct: 1309 RYGVRKMRDSVLMLASFERTADHLFNAPVNGRVDRIEGVSECIMLGIPMRTGTGMMKIKQ 1368
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 1607 bits (4160), Expect = 0.0
Identities = 835/1409 (59%), Positives = 1034/1409 (73%), Gaps = 56/1409 (3%)
Frame = -2
Query: 4421 MLRPHDNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIAN 4242
M +P + ++ TK+P+IED RRI+SI+FS+ S +EI K +EV+V+ Y+ + KP+ N
Sbjct: 1 MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHDMKPVPN 60
Query: 4241 GLLDPKMGPPNRGSG--LCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICK 4068
GLLD +MG ++ C+TC F +CPGH+G L LALPVFN+G+ ILD+LKCICK
Sbjct: 61 GLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICK 120
Query: 4067 SCSHILIPESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKMEVQCLRCGYVNGKVKK 3888
CS +L+ E + ++ LKKMRN + D+LQK+ + K+ KC C RC Y NG VKK
Sbjct: 121 GCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCKLTC---CPRCEYKNGVVKK 177
Query: 3887 GKTALQIVHSRPK-------QDKN-----REESGGPSPCLISPLDALLLFRKMLSQDCEL 3744
G+ L ++H K + KN +E+ S ++ P AL LFR+M+ +DCEL
Sbjct: 178 GRVGLIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALSLFRRMVDEDCEL 237
Query: 3743 LYINDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEP 3564
L + DRPEKLI+T I+VPP+P+RPSV+V SNE+ IT LK I+ N+ L + LQ
Sbjct: 238 LNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTG 297
Query: 3563 SNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKR 3384
SK D W LQ++V +++NSD ++Q G VQRLKGK GRFRGNLSGKR
Sbjct: 298 GLFSKCFDCWQQLQLQVVEFVNSDAPCLPESQH-----RGLVQRLKGKTGRFRGNLSGKR 352
Query: 3383 VEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKF 3204
E+TGRTVISPDPNL+ITEVA+P+LMA +LTYPE V+++N+EKLRQC+RNGP K+PGA F
Sbjct: 353 TEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANF 412
Query: 3203 VIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 3024
+I P+G K L + R+ A +LK GY V RHLEDGDVVLFNRQPSLHRMSIM HRARIM
Sbjct: 413 IITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 472
Query: 3023 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVAS 2844
PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGVQNNLCTPKNG ILVAS
Sbjct: 473 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 532
Query: 2843 TQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNIL 2664
TQDFLTSSFL+TRKD FYDR++F+L+CSY+GD ME ID+PTPA++KPIELWTGKQLF++L
Sbjct: 533 TQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVL 592
Query: 2663 LRPHAQLRVYVNLMVKEKIYCKLEDRK--------TTCREETMCPNDGFVYFRNSELISG 2508
+RP+A+ +V++NL VKEKIY K +++K T C ETMCPNDG+VYFRNSEL+SG
Sbjct: 593 VRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSG 652
Query: 2507 QLGKTTLGNGNKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKL 2328
Q+GK TLGNGNK G++SVL+RDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQPG+
Sbjct: 653 QVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEH 712
Query: 2327 LNEQKTYNINEGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCM 2148
LN QK I+EGY++C LI F +G L L PGC+AAQTLE KIT LNEIR AG VCM
Sbjct: 713 LNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCM 772
Query: 2147 KELHWRNSPLIMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTP 1968
LHWRNSPLIMSQCGSKGSPINISQMVACVGQQ+VGGRRAPDGFIDR+LPHFP SKTP
Sbjct: 773 DTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTP 832
Query: 1967 EAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDM 1788
AKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+V YD
Sbjct: 833 AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQ 892
Query: 1787 TVRNSNGTIVQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSE 1608
TVRN++G IVQF YGDDGMDPA+MEG +G PL+ ++L KV ATCP LS ++ +
Sbjct: 893 TVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQ 952
Query: 1607 IINKRLSDYDTST--GCSDA-XXXXXXXXXXXXXKRKCY--------------------- 1500
++ +L+ + TS+ GCS+ KC
Sbjct: 953 MLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEI 1012
Query: 1499 -------VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGV 1341
+S +QL+VFLD C +R SK GEPGTQMTLKTFHFAGV
Sbjct: 1013 IAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 1072
Query: 1340 ASMNVTLGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIK 1161
ASMNVTLGVPRIKEIINA+KKISTPII +L + A+ VKG +EK +LG+VA +IK
Sbjct: 1073 ASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIK 1132
Query: 1160 LVMTSIKASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLA 981
+V+ S + +++VKLDM+ I A + I+A V+ I N K + K++ +V+V+D KL
Sbjct: 1133 IVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNH-PKIKLKSE--HVRVIDRAKLR 1189
Query: 980 VTP-DADRHDAHFALHRLKNKLPTVVVKGVDTIERAIIAD--EEGKKGKLNLIVEGTGLR 810
+ P D+ LH LK LP V+VKG+ T+ER +I + +EGK K NL+VEGT L
Sbjct: 1190 IYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLL 1249
Query: 809 EVMGILGIDGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADV 630
VMG G+D R T+SNHI+E+ TLGIEAAR II EI+ M+SH M++D+RHMMLLAD+
Sbjct: 1250 AVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADL 1309
Query: 629 MTFKGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPM 450
MT+KGEVL +TR GIAKMK S+LMLASFEKT++HLFN S +GRE++IEGVSECIIMG+PM
Sbjct: 1310 MTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPM 1369
Query: 449 QIGTGILKIRQRRTDSLPALKYASEPIFA 363
Q+GTGILK+RQ R D LP LKY +PI +
Sbjct: 1370 QLGTGILKVRQ-RLDHLPELKYQPDPILS 1397
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 1606 bits (4159), Expect = 0.0
Identities = 833/1404 (59%), Positives = 1027/1404 (73%), Gaps = 51/1404 (3%)
Frame = -2
Query: 4421 MLRPHDNIQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIAN 4242
M +P + ++ TK+P+IED RRI+SI+FS+ S +EI K +EV+V+ Y + KP+ N
Sbjct: 1 MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGHDMKPVPN 60
Query: 4241 GLLDPKMGPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSC 4062
GLLDP+MG PN+ C+TC +F DCPGH+G L LALPVFN+G+ ILD+LKCICKSC
Sbjct: 61 GLLDPRMGVPNKREK-CSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119
Query: 4061 SHILIPESECKDLLKKMRNTKLDSLQKTELRKRTIKKCSSKMEVQCLRCGYVNGKVKKGK 3882
S +L+ E + ++ LKKMRN + D+LQK+ K+ KC C RC Y NG VKKG+
Sbjct: 120 SRVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSC---CPRCDYRNGVVKKGR 176
Query: 3881 TALQIVHSRPKQ------------DKNREESGGPSPCLISPLDALLLFRKMLSQDCELLY 3738
L +VH K +E+ S ++ P L LFR+M +DCELL
Sbjct: 177 AGLIVVHDCSKVLDGHTEELKNALQNKKEKVSANSVRVLDPATVLSLFRRMTDEDCELLN 236
Query: 3737 INDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSN 3558
+ DRPEKLI++ I+VPP+P+RPSV+V SNE+ IT LK I+ N+ L + L
Sbjct: 237 LGDRPEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGGP 296
Query: 3557 SSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
+K D W YLQ++V +Y+NSD +Q G VQRLKGK GRFRGNLSGKR E
Sbjct: 297 FTKCFDCWQYLQLQVVEYVNSDAPCLPDSQH-----RGLVQRLKGKTGRFRGNLSGKRTE 351
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
+TGRTVISPDPNLKITEVA+P+LMA +LTYPE V+++NIEKLRQC+RNGP KYPGA FV
Sbjct: 352 YTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVT 411
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
+P+G K+ L + R+ A +LK G IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPW
Sbjct: 412 QPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPW 471
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGVQNNLCTPKNG ILVASTQ
Sbjct: 472 RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 531
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLTSSFL+TRKDTFYDR++F+L+CSY+GD ME ID+PTPA++KPIELWTGKQLF++L+R
Sbjct: 532 DFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVR 591
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRK-----TTCREETMCPNDGFVYFRNSELISGQLGKT 2493
P+A RV++NL V+EKIY K + +K T C ETMCPNDG+VYFRNSEL+SGQ+GK
Sbjct: 592 PNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKA 651
Query: 2492 TLGNGNKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQK 2313
TLGNGNK GL+SVL+RDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQPG+ LN QK
Sbjct: 652 TLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQK 711
Query: 2312 TYNINEGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHW 2133
I+ GY++C LI F +G L L PGC+AAQTLE IT LNEIR IAG VCM LHW
Sbjct: 712 KKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHW 771
Query: 2132 RNSPLIMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGF 1953
RNSPLIMSQCGSKGSPINISQMVACVGQQ+VGGRRAPDGF++R+LPHFP SKTP AKGF
Sbjct: 772 RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGF 831
Query: 1952 VANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNS 1773
VANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+V YD TVRN+
Sbjct: 832 VANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNA 891
Query: 1772 NGTIVQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKR 1593
+G IVQF YGDDGMDPA+MEG +G PL+ ++L KV ATCP LS + +++ +
Sbjct: 892 SGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDK 951
Query: 1592 LSDYDTST--GCSDA-XXXXXXXXXXXXXKRKCY-------------------------- 1500
L +DTS+ GCS+ KC
Sbjct: 952 LLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAII 1011
Query: 1499 --VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNV 1326
+S +QL+VFLD C++R +SK GEPGTQMTLKTFHFAGVASMNV
Sbjct: 1012 SGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1071
Query: 1325 TLGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTS 1146
TLGVPRIKEIINA++KISTPII A+L + A+ VKG +EK +LG+VA +I++V+ S
Sbjct: 1072 TLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKS 1131
Query: 1145 IKASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-D 969
+ ++IVKLDM+ I + + I+A V+ I N K + K++ +V+V+D KL + P
Sbjct: 1132 SQPNLIVKLDMQLIESLHMGISADSVQLSILNH-PKIKLKSE--HVRVIDRAKLRIYPAG 1188
Query: 968 ADRHDAHFALHRLKNKLPTVVVKGVDTIERAIIADEEGKK--GKLNLIVEGTGLREVMGI 795
D+ LH LK+ LP V+VKG+ T+ER +I + + K + L+VEGT L VMG
Sbjct: 1189 TDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGT 1248
Query: 794 LGIDGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKG 615
G+D KT+SNHI+E QTLGIEAAR II EI+ M+SH M++D RHMMLLAD+MT+KG
Sbjct: 1249 PGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKG 1308
Query: 614 EVLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTG 435
E+L +TR GIAKMK S+LMLASFEKT++HLFN S +GRE++IEGVSECIIMG+PMQ+GTG
Sbjct: 1309 EILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTG 1368
Query: 434 ILKIRQRRTDSLPALKYASEPIFA 363
ILK+RQ R D +P KY +PI +
Sbjct: 1369 ILKVRQ-RLDHVPEFKYQPDPILS 1391
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 1605 bits (4155), Expect = 0.0
Identities = 848/1389 (61%), Positives = 1017/1389 (73%), Gaps = 43/1389 (3%)
Frame = -2
Query: 4400 IQFTKQPYIEDNQPRRIESIKFSMFSSTEIGKISEVEVFRGVYYDAEKKPIANGLLDPKM 4221
I+FTK+PYIED P +I+SI FS+ S E+ K +EV+V+ YD KP NGLLDP+M
Sbjct: 7 IEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRM 66
Query: 4220 GPPNRGSGLCATCSAKFEDCPGHYGCLTLALPVFNIGYIGSILDILKCICKSCSHILIPE 4041
GPPN+ S +C TC F++CPGHYG L L LPV+N+GY ILDILKCICK CS++L+ E
Sbjct: 67 GPPNKKS-ICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDE 125
Query: 4040 SECKDLLKKMRNTKLDSLQKTELRKRTIKKCS---SKMEVQCLRCGYVNGKVKK--GKTA 3876
+D L+KMRN +++ L+KTEL K +KKCS S+ + C +CGY+NG VKK +
Sbjct: 126 KLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIAAQFG 185
Query: 3875 LQIVHSRPK-------QDKNREESGGPSPCLISPLDALL-------LFRKMLSQDCELLY 3738
+ I H R K + K+ S I+PL +L LF++M +DCELLY
Sbjct: 186 IGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDCELLY 245
Query: 3737 INDRPEKLIITNISVPPMPLRPSVIVDGGFQSNENDITERLKRIIQANACLHQGLQEPSN 3558
I RPE LIIT + VPP+ +RPSV++ GG QSNEND+T RLK+II NA LH+ L +P++
Sbjct: 246 IAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKILSQPTS 304
Query: 3557 SSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3378
S K + WD +Q+EVA+YINS+VR Q Q PLSG +QRLKGK GRFR NLSGKRVE
Sbjct: 305 SPKNMQVWDTVQIEVARYINSEVR-GCQNQPEEHPLSGILQRLKGKGGRFRANLSGKRVE 363
Query: 3377 FTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVI 3198
FTGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVRNGP KYPGA+ V
Sbjct: 364 FTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423
Query: 3197 EPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3018
P+G + L RKRIADEL G IV RHL++GDVVLFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424 YPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPW 483
Query: 3017 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQ 2838
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNG ILVASTQ
Sbjct: 484 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543
Query: 2837 DFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIELWTGKQLFNILLR 2658
DFLTSSFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP +LKPIELWTGKQ+F++LLR
Sbjct: 544 DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSVLLR 603
Query: 2657 PHAQLRVYVNLMVKEKIYCKLEDRKTTCREETMCPNDGFVYFRNSELISGQLGKTTLGNG 2478
P+A +RVYV L VKEK + K E +ETMC NDG+VYFRNSELISGQLGK TLGNG
Sbjct: 604 PNASIRVYVTLNVKEKNFKKGEHG----FDETMCINDGWVYFRNSELISGQLGKATLGNG 659
Query: 2477 NKVGLFSVLVRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKLLNEQKTYNIN 2298
NK GL+S+L+RDYN+HAAA CMNRLAKLSARWIG HGFSIGIDDVQPG+ L++++ +I
Sbjct: 660 NKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQ 719
Query: 2297 EGYRECDGLIKSFNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPL 2118
GY +C I+ FN G L L G D A++LEA+IT LN IRE GK CM LHWRNSPL
Sbjct: 720 FGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPL 779
Query: 2117 IMSQCGSKGSPINISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSF 1938
IMSQCGSKGSPINISQMVACVGQQ V G RAPDGFIDRSLPHFP+ SK+P AKGFVANSF
Sbjct: 780 IMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSF 839
Query: 1937 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIV 1758
YSGLTATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMK LEDL VHYD TVRN++G I+
Sbjct: 840 YSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCIL 899
Query: 1757 QFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATC-PAGRDMKLSLAEMSEIINKRLSDY 1581
QF YGDDGMDPA MEG +G PL+F RL KV+ATC P LS E+S+ + L +
Sbjct: 900 QFTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELVRH 959
Query: 1580 DTSTGCSDAXXXXXXXXXXXXXKRKC------YVSEQQ-----------LKVFLDACITR 1452
D S C+DA + Y + Q ++VF+ C+ R
Sbjct: 960 DKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKASGQKYEILPLIYINMQVFVKICVFR 1019
Query: 1451 LRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKIS 1272
R K GEPGTQMTLKTFHFAGVASMN+T GVPRI EIINASK IS
Sbjct: 1020 YREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNIS 1079
Query: 1271 TPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASR 1092
TP+I A+LE+ + A+ VKG+IEKT LGQVA+SI+++MTS AS+ + LD + I +
Sbjct: 1080 TPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEAC 1139
Query: 1091 LCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPT 912
L I + VK I L R K + +++VL D L +TP D+ AHF LH LKN LP
Sbjct: 1140 LSITPWSVKNSI---LKTPRIKLNDNDIRVL-DTGLDITPVVDKSRAHFNLHNLKNVLPN 1195
Query: 911 VVVKGVDTIERAIIADEEGK------KGKLNLIVEGTGLREVMGILGIDGRKTESNHIIE 750
++V G+ T+ER ++A++ K K K L VEGT L VMG GI+GR T SN+++E
Sbjct: 1196 IIVNGIKTVERVVVAEDMDKSKQIDGKTKWKLFVEGTNLLAVMGTPGINGRTTTSNNVVE 1255
Query: 749 VQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKE 570
V +TLGIEAAR+ II EI VM +H M +DIRHMMLLADVMT++GEVL + R GI KM +
Sbjct: 1256 VSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDK 1315
Query: 569 SILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPAL 390
S+LM ASFE+T DHLF+ + +G+ + IEGV+EC+IMG+PM++GTGILK+ Q RTD LP L
Sbjct: 1316 SVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQ-RTDDLPKL 1374
Query: 389 KYASEPIFA 363
KY +PI +
Sbjct: 1375 KYGPDPIIS 1383