BLASTX nr result
ID: Achyranthes22_contig00019436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00019436
(2221 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 404 e-174
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 397 e-156
gb|ABW74566.1| integrase [Boechera divaricarpa] 405 e-155
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 374 e-149
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 405 e-139
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 322 e-127
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 400 e-126
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 311 e-123
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group] 313 e-122
emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera] 270 e-119
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 292 e-118
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 281 e-118
gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 288 e-117
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 281 e-117
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 281 e-117
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 280 e-117
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao] 267 e-115
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 275 e-115
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 277 e-114
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 283 e-113
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 404 bits (1038), Expect(4) = e-174
Identities = 201/350 (57%), Positives = 259/350 (74%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F +GF+RS NEPTLY+KKQG +FL+VCLYVDDMIY+GSS++++ +FK+ MM+ EM
Sbjct: 983 FQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSD 1042
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
LEV+Q +DGIF+SQ+KYA DL+KKF MMNC A+TPMN+NEKL DG
Sbjct: 1043 LGLLKYFLGLEVIQDKDGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEK 1102
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
A+ K FRS+VGGLNYL H+RP+IA+ VS +SRF+ PT+ HFGAAKR+LRY+ GT GI
Sbjct: 1103 ANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGI 1162
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY+ PNF+LVG+ DSD+AG LDD+KSTSG F+ GV++ S KK + VALS+ EAEY
Sbjct: 1163 WYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVALSTSEAEYT 1222
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A + A QA+WLR+LL + Q E+ +IF D+K IA KNP+FH RTKHID++Y+ I
Sbjct: 1223 AASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIR 1282
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSV 230
L++ G I LK+C+TN+Q DI TKSL QAKH +F LQ+GV SRGSV
Sbjct: 1283 TLVADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQLGVCDFESRGSV 1332
Score = 157 bits (398), Expect(4) = e-174
Identities = 73/98 (74%), Positives = 88/98 (89%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGYSQQQ VDFDETFSP+A FETVR +ALAAQL P++QFDVK AFLNG+L EEVYV
Sbjct: 885 AKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVS 944
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAY 1389
QP+G+++TG E+KVYKL+KALYG+K+APRAWYSKID++
Sbjct: 945 QPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSF 982
Score = 67.8 bits (164), Expect(4) = e-174
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Frame = -1
Query: 2221 IQSKAYRLYNLISDKIIISRDVKFKEAEHWTWEIGSSKPTPSPVHVVPFN----TTLDTT 2054
+QSKAYRLYN IS K+IISR+V F E W + G+ S + ++P + +
Sbjct: 701 LQSKAYRLYNPISGKVIISRNVVFNEDVSWNFNSGNMM---SNIQLLPTDEESAVDFGNS 757
Query: 2053 PE--PYEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQNFRCLSDIYASCNFALLAS 1880
P P N + + + SC FALL S
Sbjct: 758 PNSSPVSSSVSSPIAPSTTVAPDESSVEPIPLRRSTREKKPNPKYSNTVNTSCQFALLVS 817
Query: 1879 NPMYYEDVAGSDIWQNAMLEELSAIEKKS 1793
+P+ YE+ W+NAM+EE+ AIE+ S
Sbjct: 818 DPICYEEAVEQSEWKNAMIEEIQAIERNS 846
Score = 55.1 bits (131), Expect(4) = e-174
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
Q +++N TW+LV P KNV GLK V+RTKY++ G IQK KAR
Sbjct: 840 QAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKAR 882
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 397 bits (1021), Expect(3) = e-156
Identities = 195/350 (55%), Positives = 245/350 (70%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F+ENGF++S +EP LY+K+QG D L++CLYVDDMIYMGSS ++I EFKACM KK EM
Sbjct: 1083 FVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSD 1142
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
LEV Q DG+F+SQ+KYA DL+KKFNM+NC + PMN NEKL EDG
Sbjct: 1143 LGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTER 1202
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
ADA+RFRS+VGGL YL H+RP+IA+ V ISRFMHCP++ H GA KR+LRYI GT I
Sbjct: 1203 ADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGATKRLLRYIAGTYDFRI 1262
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
W +V FKLVGY DSDWAG L+D+KSTSGY+F+L AEY
Sbjct: 1263 WXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLG-------------------SAEYT 1303
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
T ACQAVWLRR+LA++ Q E I+CDNK IA TKNPA+H RTKH+DIR + I
Sbjct: 1304 VATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIR 1363
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSV 230
+L+ G++ L+YCNTN+Q+ D+LTK+LS+ KH +F ++GV + SR SV
Sbjct: 1364 DLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNFESRRSV 1413
Score = 150 bits (378), Expect(3) = e-156
Identities = 69/102 (67%), Positives = 85/102 (83%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGY+QQ VD+D+TFSP+A FETVRT +ALAA + W ++QFDVK AFLNGEL EEVY
Sbjct: 985 AKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXS 1044
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
QPEG+IV +E+ VY+LK ALYG+K+APRAWYSKID+Y + N
Sbjct: 1045 QPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFVEN 1086
Score = 55.8 bits (133), Expect(3) = e-156
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN+TW+LV LP +KNV G+K V+RTKY + G IQK KAR
Sbjct: 942 IEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKAR 982
Score = 149 bits (375), Expect = 7e-33
Identities = 78/154 (50%), Positives = 92/154 (59%)
Frame = -1
Query: 820 MHCPTQHHFGAAKRILRYIGGTIGHGIWYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIF 641
MHC ++ H GAA R+LRYI GT IWY +V FKLVGY DSDWAG +
Sbjct: 1 MHCSSKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGXVCWXS------- 53
Query: 640 TLRLGVIS*S*KK*DVVALSSLEAEYIAVTGDACQAVWLRRLLANVLQVQNEAIDIFCDN 461
KK V LSS EAEY A T ACQAVWLRR+L ++ Q E I+CDN
Sbjct: 54 -----------KKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDN 102
Query: 460 KVTIARTKNPAFHNRTKHIDIRYYIICNLISSGE 359
K IA TKNPA+H RTKH+DIR + I +L+ GE
Sbjct: 103 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGE 136
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 405 bits (1041), Expect(3) = e-155
Identities = 202/350 (57%), Positives = 253/350 (72%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F E GF+RS +EPTLY+KKQG D LVVCLYVDDMIYMGSS +++ EFKA MM+K EM
Sbjct: 814 FAETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTD 873
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
LEV Q DG+F+SQ KYA DL+K+F+M C+ TPMN+NEKL+ DG
Sbjct: 874 LGLLYFFLGLEVKQVEDGVFVSQHKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEK 933
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
ADA +FRS+VGGL YL H+RP+I + VS ISRFMH PT+ HFGAAKR+LRYI T +G+
Sbjct: 934 ADATKFRSLVGGLIYLTHTRPDICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGL 993
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY +V FKLVG+ DSDWAG + D+KSTSG++F L G + S KK +V ALSS EAEY
Sbjct: 994 WYCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYT 1053
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A T ACQAVWLRR+LA++ Q Q +A IFCDNK TIA KNPA+H RTKHI I+ + I
Sbjct: 1054 AATAAACQAVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGRTKHISIKVHFIR 1113
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSV 230
+L+S G + L+YC+TN+Q D+LTK+LS+ K +F ++GV S SV
Sbjct: 1114 DLVSEGSVTLEYCSTNEQSADVLTKALSRNKFDYFRSKLGVCKFESMESV 1163
Score = 143 bits (360), Expect(3) = e-155
Identities = 65/97 (67%), Positives = 82/97 (84%)
Frame = -3
Query: 1679 KGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVVQ 1500
KGY+Q+ VD+++TFSP+A F+T+RT +AL A + WPI+QFDVK AFLNGEL EEVYV Q
Sbjct: 717 KGYAQEYGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQ 776
Query: 1499 PEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAY 1389
PEG+IV G E VY+L KALYG+K+APRAWY+KID+Y
Sbjct: 777 PEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSY 813
Score = 52.4 bits (124), Expect(3) = e-155
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KNQTW LV LP EK+ G+K V++TKY + IQK+KAR
Sbjct: 673 IEKNQTWQLVELPEEKHSIGVKWVFKTKYQADDNIQKYKAR 713
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 374 bits (959), Expect(3) = e-149
Identities = 186/306 (60%), Positives = 224/306 (73%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F+ENGF+RS +EP LY+K+QG D L++CLYVDDMIYMGSS ++I EFKACM KK EM
Sbjct: 912 FVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSB 971
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
LEV Q DG+F+SQ+KY DL+KKFNM+NC +T MN NEKL EDG
Sbjct: 972 LGLLHFFLXLEVKQVEDGVFVSQRKYXVDLLKKFNMLNCKVVATXMNSNEKLQAEDGTER 1031
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
ADA+RF S+V GL YL H+RP+IA+ V ISRFMHCP++ H GAAKR+LRYI GT GI
Sbjct: 1032 ADARRFXSLVRGLIYLTHTRPDIAFPVEVISRFMHCPSKQHLGAAKRLLRYIVGTYDFGI 1091
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY +V FKLVGY DSDWAG L+D+KSTSGY+F+L G + S KK V ALSS EAEY
Sbjct: 1092 WYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYT 1151
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A T ACQAVWLRR+LA++ Q E I+CDNK IA TKNPA+H RTKH+DIR + I
Sbjct: 1152 AATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIR 1211
Query: 379 NLISSG 362
+L+ G
Sbjct: 1212 DLVVEG 1217
Score = 149 bits (377), Expect(3) = e-149
Identities = 70/102 (68%), Positives = 85/102 (83%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGY+QQ VD+D+TFSP+A FETVRT +ALAA + W +QFDVK AFLNGEL EEVYV
Sbjct: 814 AKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCXYQFDVKSAFLNGELVEEVYVS 873
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
Q EG+IV +E+ VY+LKKALYG+K+APRAWYSKID+Y + N
Sbjct: 874 QXEGFIVPXKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVEN 915
Score = 55.8 bits (133), Expect(3) = e-149
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN+TW+LV LP +KNV G+K V+RTKY + G IQK KAR
Sbjct: 771 IEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKAR 811
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 405 bits (1042), Expect(3) = e-139
Identities = 205/350 (58%), Positives = 252/350 (72%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F+ENGF+RS +EP LY+K+Q DDMIYMGSS +I EFKACM KK EM
Sbjct: 935 FVENGFKRSKSEPNLYLKRQ------------DDMIYMGSSSXLINEFKACMKKKFEMSX 982
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
LEV Q DG+F+SQ+KYA DL+KKFNM+NC +TPMN NEKL EDG
Sbjct: 983 LGLLHXFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTER 1042
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
ADA+RFRS+VGGL YL H+RP+IA+ V ISRFMHCP++ H GAAKR+LRYI GT GI
Sbjct: 1043 ADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGI 1102
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY +V FKLVGY DSDWAG L+D+KS SGY+F+L G + S KK V ALSS EAEY
Sbjct: 1103 WYGHVQEFKLVGYTDSDWAGCLEDRKSXSGYMFSLGSGAVCWSSKKQAVTALSSXEAEYT 1162
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A T CQAVWLRR+LA++ Q E I+CDNK IA TKNPA+H RTKH+DIR + I
Sbjct: 1163 AATSSXCQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIR 1222
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSV 230
+L+ G++ L+YCNTN+Q+ D+LTK+LS+ KH +F ++GV + SRGSV
Sbjct: 1223 DLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNFESRGSV 1272
Score = 86.3 bits (212), Expect(3) = e-139
Identities = 45/102 (44%), Positives = 57/102 (55%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGY+QQ VD+D+TFSP+A FET
Sbjct: 874 AKGYAQQHGVDYDDTFSPVARFET------------------------------------ 897
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
PEG+IV +E+ VY+LKKALYG+K+APRAWYSKID+Y + N
Sbjct: 898 -PEGFIVPSKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVEN 938
Score = 55.8 bits (133), Expect(3) = e-139
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN+TW+LV LP +KNV G+K V+RTKY + G IQK KAR
Sbjct: 831 IEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKAR 871
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 322 bits (825), Expect(3) = e-127
Identities = 168/348 (48%), Positives = 222/348 (63%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F+ENGF RS +EPTLYVK + N L+V LYVDD+I+ G+ E ++ +F+ MMKK EM
Sbjct: 1073 FIENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSD 1132
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
+EV Q DG+F+ Q++Y ++KKF M C+ STP+ +NEKL EDG M
Sbjct: 1133 MGLLHYFLGIEVYQEEDGVFICQKRYVEHILKKFGMAGCNXVSTPLVVNEKLRKEDGGKM 1192
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
D FRS+VG L YL +RP+I + S +SRFMH P+ H GAAKR+LRY+ GT+ GI
Sbjct: 1193 VDETHFRSLVGNLLYLTATRPDIMFAASLLSRFMHYPSHLHLGAAKRVLRYLQGTVELGI 1252
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
Y KL+G+ DSDW G +DD KSTSGY F+L GVIS KK VA SS EAEYI
Sbjct: 1253 KYFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLGSGVISWVSKKQGSVAQSSAEAEYI 1312
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
+ + QA+WLRR+L ++ + QNEA + CDNK IA KN FH+RT+HI ++Y+ I
Sbjct: 1313 SASLATSQAIWLRRILEDIKEKQNEATYLLCDNKSAIAIAKNXVFHSRTRHIAVKYHFIK 1372
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRG 236
+IS GE+ L YC + +Q DI TK+L K F +GV + RG
Sbjct: 1373 EVISDGEVQLMYCKSEEQXADIFTKALPLEKLVHFRKLLGVEELHIRG 1420
Score = 144 bits (362), Expect(3) = e-127
Identities = 64/102 (62%), Positives = 84/102 (82%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGYSQQ DF ETF+P+A +T+RT IA+AAQ W ++Q D+K AFLNG+L E+YV
Sbjct: 975 AKGYSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVE 1034
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
QP+G++V GEE+KVYKLKKALYG+K+APRAWY++ID+Y + N
Sbjct: 1035 QPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIEN 1076
Score = 42.4 bits (98), Expect(3) = e-127
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRT------KYDSKGEIQKFKAR 1684
++KN+TW LV P +K + G+K ++R KY S G +Q+ KAR
Sbjct: 926 IEKNETWQLVEKPKDKEIIGVKWIFRVKWIFRXKYHSDGRVQRLKAR 972
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 400 bits (1028), Expect(2) = e-126
Identities = 200/350 (57%), Positives = 248/350 (70%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F+ENGF+RS +EP LY+K+Q DDMIYMGSS ++I EFKACM KK EM
Sbjct: 844 FVENGFERSKSEPNLYLKRQ------------DDMIYMGSSSSLINEFKACMKKKFEMSD 891
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
LEV Q DG+F+SQ+KYA DL+KKFNM+NC +TPMN NEKL EDG
Sbjct: 892 LGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTER 951
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
ADA+RFRS+VGGL YL H+RP+ A+ V ISRFMHCP++ H GAAKR+LRYI GT I
Sbjct: 952 ADARRFRSLVGGLIYLTHTRPDXAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRI 1011
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY +V FKLVGY DSDWAG L+D+KSTSGY+F+L G + S KK V ALSS EAEY
Sbjct: 1012 WYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYT 1071
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A T ACQAVWLRR+L ++ Q E I+CDNK IA TKNPA+H RTKH++IR + I
Sbjct: 1072 AATSSACQAVWLRRILVDINQEHEEXTVIYCDNKAAIAMTKNPAYHGRTKHVBIRVHFIR 1131
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSV 230
+L+ G + L+YCNTN+Q+ D+ TK+LS+ KH +F ++GV + SRGSV
Sbjct: 1132 DLVVEGXVVLQYCNTNEQVADVRTKALSRDKHVYFRSKLGVCNFESRGSV 1181
Score = 81.6 bits (200), Expect(2) = e-126
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = -3
Query: 1541 FLNGELGEEVYVVQPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
+L EL EEVYV QPEG+IV +E+ VY+LKKALYG+K+APRAWYSKID+Y + N
Sbjct: 793 YLADELVEEVYVSQPEGFIVPDKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVEN 847
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 311 bits (796), Expect(3) = e-123
Identities = 160/331 (48%), Positives = 219/331 (66%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F++ GF +S +EPTLYV K G D L+V LYVDD+IY G+SE ++ +FK MM EM
Sbjct: 800 FIQKGFAKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSD 858
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
+EV QS +GIF+SQ+KYA +++KKF M NC +TP+ NEK DG
Sbjct: 859 LGLLYYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADK 918
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
D +RS+VG L YL +RP+I + S +SR+M P+Q +F AAKR+LRYI GT +GI
Sbjct: 919 VDPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGI 978
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY V KL+GY DSDWAG LDD K TSGY F+L G+ S S KK ++VALSS EAEY+
Sbjct: 979 WYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSGMCSWSTKKQNIVALSSAEAEYV 1038
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A + Q VWLRR++ ++ + Q + I+CD+K IA ++NP H+RTKHI I+Y+ I
Sbjct: 1039 AASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIR 1098
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAK 287
+ E+ L++C T++Q+ DI TK+LS+ K
Sbjct: 1099 EAVDRQEVKLEFCRTDEQLADIFTKALSKEK 1129
Score = 135 bits (340), Expect(3) = e-123
Identities = 61/100 (61%), Positives = 80/100 (80%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKG+ Q+ +D+ ET++P+A ET+RT IALAAQ +W I+Q DVK AFLNG L EE+YV
Sbjct: 702 AKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVE 761
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYML 1383
QPEG+ V G E+KV++LKKALYG+K+APR WYS+ID Y +
Sbjct: 762 QPEGFSVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYFI 801
Score = 48.5 bits (114), Expect(3) = e-123
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN TW+LV P ++ V G+K VY+TK + G +QK+KAR
Sbjct: 659 IEKNNTWELVDRPRDREVIGVKWVYKTKLNLDGSVQKYKAR 699
>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 313 bits (801), Expect(3) = e-122
Identities = 164/336 (48%), Positives = 222/336 (66%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F++ GF +S +EP LYVKK G D L+V LYVDD+IY G+SE ++ +FK MM EM
Sbjct: 794 FIQKGFAKSISEPILYVKKTGT-DILIVSLYVDDLIYTGNSEKLMQDFKKDMMHTYEMSD 852
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
+EV QS +GIF+SQ+KYA +++KKF M NC +TP+ NEK DG
Sbjct: 853 LGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADK 912
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
AD +RS+VG L YL +RP+I + S +SR+M P+Q +F AAKR+LRYI GT +GI
Sbjct: 913 ADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAYYGI 972
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY V KL+GY DSDWAG LDD KSTSGY F+L G+ S S KK ++VALSS EAEY+
Sbjct: 973 WYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSGMWSWSTKKQNIVALSSAEAEYV 1032
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A + Q VWLRR++ ++ + Q + I+CD+K IA +NP H+RTKHI I+Y+ I
Sbjct: 1033 AASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAINENPVSHDRTKHIAIKYHYIR 1092
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFC 272
+ E+ L++C T++Q+ DI TK+LS+ K F C
Sbjct: 1093 EAVDRQEVKLEFCRTDEQLADIFTKALSKEK--FIC 1126
Score = 128 bits (322), Expect(3) = e-122
Identities = 59/100 (59%), Positives = 78/100 (78%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKG+ Q+ +D+ ET++ +A ET+ T IALAAQ +W I+Q DVK AFLNG L EE+YV
Sbjct: 696 AKGFKQKPGIDYYETYAHVARLETIHTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVE 755
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYML 1383
QPE + V G E+KV++LKKALYG+K+APRAWYS+ID Y +
Sbjct: 756 QPERFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFI 795
Score = 48.9 bits (115), Expect(3) = e-122
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN TW+LV P ++ V G+K VY+TK + G +QK+KAR
Sbjct: 653 IEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKAR 693
>emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
Length = 1120
Score = 270 bits (689), Expect(4) = e-119
Identities = 142/327 (43%), Positives = 200/327 (61%)
Frame = -1
Query: 1267 GFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXXXXXX 1088
GF +SP+E TLYVK + + +VV +YVDD++ GS+E ++ EFKA M+K EM
Sbjct: 800 GFVKSPSEATLYVKGT-DANLIVVSVYVDDLLVTGSNEKLVKEFKAEMLKVFEMTDLGLM 858
Query: 1087 XXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGMADAK 908
EV Q DG+F+SQ+KYA +++ KF+M +C STPM EK +DG D
Sbjct: 859 SYFLGXEVKQDHDGVFISQKKYAKEILNKFHMDDCKRTSTPMXQKEKFSKDDGTEKVDES 918
Query: 907 RFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGIWYTN 728
++RS++G L YL ++P+I + VS +SRFMHC ++ HF AAKRI
Sbjct: 919 QYRSLIGCLMYLTATKPDIMFSVSLLSRFMHCASEVHFQAAKRI---------------- 962
Query: 727 VPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYIAVTG 548
NFKL GY DSDWAGS+DD +ST+G+ F+ G+ S S KK DV+A S+ EAEY+A
Sbjct: 963 --NFKLHGYSDSDWAGSIDDMRSTTGFCFSFGSGIFSWSSKKQDVIAQSTAEAEYVAANA 1020
Query: 547 DACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIICNLIS 368
QA+W+R++LA++ QNE I DN+ IA + + FH +TKH I+ Y +
Sbjct: 1021 TVNQAIWIRKILADLHMKQNEPTQIHVDNQAAIAISNDSVFHGKTKHFKIKLYHLREEQK 1080
Query: 367 SGEIALKYCNTNQQIVDILTKSLSQAK 287
GE+ L YC T QI D+LTK+L +A+
Sbjct: 1081 HGEVKLLYCKTEDQIADVLTKALPKAR 1107
Score = 129 bits (323), Expect(4) = e-119
Identities = 60/98 (61%), Positives = 75/98 (76%)
Frame = -3
Query: 1679 KGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVVQ 1500
KGYSQ VDF E F+P+A +T+R +AL AQ W +Q DVK AFLNG L EE+YV Q
Sbjct: 699 KGYSQVFGVDFSEXFAPVARLDTIRMLLALTAQKGWKTYQLDVKXAFLNGYLQEEIYVEQ 758
Query: 1499 PEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYM 1386
PEG+ V G+E+KVY LKKALYG+K+APRAWYS+ID ++
Sbjct: 759 PEGFQVKGQEEKVYLLKKALYGLKQAPRAWYSRIDEHL 796
Score = 52.8 bits (125), Expect(4) = e-119
Identities = 42/141 (29%), Positives = 54/141 (38%), Gaps = 2/141 (1%)
Frame = -1
Query: 2215 SKAYRLYNLISDKIIISRDVKFKEAEHWTWEIGSSKPTPSPVHVVP--FNTTLDTTPEPY 2042
SKAYR++ + KI++SRDVKF E W WE P VP F+ +D P
Sbjct: 559 SKAYRIFQPQNGKILVSRDVKFMEBRQWNWEESIKMQLPK----VPQYFDEDIDDVP--- 611
Query: 2041 EQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQNFRCLSDIYASCNFALLASNPMYYE 1862
+ R LSD+Y N A+ P +E
Sbjct: 612 ---------------------------------VRGIRSLSDVYERNNVAVF--EPAEFE 636
Query: 1861 DVAGSDIWQNAMLEELSAIEK 1799
+ D W AM EEL IEK
Sbjct: 637 EAEKDDKWIEAMKEELRMIEK 657
Score = 48.5 bits (114), Expect(4) = e-119
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+ ++KN TW+LV P + V G+K VYRTK ++ G + K+KAR
Sbjct: 653 RMIEKNDTWELVDRPQHRKVIGVKWVYRTKLNADGSVNKYKAR 695
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 292 bits (748), Expect(3) = e-118
Identities = 153/331 (46%), Positives = 209/331 (63%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F++ GF +S +EPTLYV K G D L+V LYVDD+IY G+SE ++ +FK MM EM
Sbjct: 1010 FIQKGFAKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSD 1068
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
+EV QS +GIF+SQ+KYA +++KKF M NC +TP+ NEK DG
Sbjct: 1069 LGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADK 1128
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
AD +RS+VG L YL +RP+I + S +SR+M P+Q +F AAKR+LRYI GT +GI
Sbjct: 1129 ADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGI 1188
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY V KL+GY DSDWAG LDD KSTSGY F +L S EAEY+
Sbjct: 1189 WYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAF-----------------SLGSAEAEYV 1231
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A + Q VWLRR++ ++ + Q + I+CD+K IA ++NP H+RTKHI I+Y+ I
Sbjct: 1232 AASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIR 1291
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAK 287
+ E+ L++C T++Q+ DI TK+LS+ K
Sbjct: 1292 EAVDRQEVKLEFCRTDEQLADIFTKALSKEK 1322
Score = 137 bits (344), Expect(3) = e-118
Identities = 62/100 (62%), Positives = 81/100 (81%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKG+ Q+ +D+ ET++P+A ET+RT IALAAQ +W I+Q DVK AFLNG L EE+YV
Sbjct: 912 AKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVE 971
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYML 1383
QPEG+ V G E+KV++LKKALYG+K+APRAWYS+ID Y +
Sbjct: 972 QPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFI 1011
Score = 48.9 bits (115), Expect(3) = e-118
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN TW+LV P ++ V G+K VY+TK + G +QK+KAR
Sbjct: 869 IEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKAR 909
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 281 bits (719), Expect(3) = e-118
Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 1/353 (0%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F E F + P E LY+K Q D L+ CLYVDD+I+ G++ ++ EFK M K+ EM
Sbjct: 970 FKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTD 1028
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVV-EDGIG 923
+EV Q +GIF++Q+ YA +++KKF M + +P TPM KL E+G G
Sbjct: 1029 IGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEG 1088
Query: 922 MADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHG 743
+ D F+S+VG L YL +RP+I Y V +SR+M PT HF AAKRILRYI GT+ G
Sbjct: 1089 V-DPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFG 1147
Query: 742 IWYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEY 563
+ Y+ ++KLVGY DSDW G +DD+KSTSG++F + + KK +V LS+ EAEY
Sbjct: 1148 LHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEY 1207
Query: 562 IAVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYII 383
+A T C A+WLR LL + Q E IF DNK IA KNP FH+R+KHID RY+ I
Sbjct: 1208 VAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYI 1267
Query: 382 CNLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSVWS 224
+S ++ L+Y T+ Q+ DI TK L + +GV RG V S
Sbjct: 1268 RECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSSLRGGVES 1320
Score = 144 bits (364), Expect(3) = e-118
Identities = 67/98 (68%), Positives = 81/98 (82%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGYSQ+ +D+DE F+P+A ETVR I+LAAQ KW IHQ DVK AFLNG+L EEVY+
Sbjct: 872 AKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 931
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAY 1389
QP+GYIV GEEDKV +LKKALYG+K+APRAW ++ID Y
Sbjct: 932 QPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKY 969
Score = 49.7 bits (117), Expect(3) = e-118
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+ ++KN TW+L SLP G+K VY+ K +SKGE++++KAR
Sbjct: 827 KSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKAR 869
>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 288 bits (737), Expect(3) = e-117
Identities = 152/331 (45%), Positives = 207/331 (62%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F++ GF +S +EPTLYV K G D L+V LYVDD+IY G+SE ++ +FK MM EM
Sbjct: 873 FIQKGFAKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSD 931
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
+EV QS +GIF+SQ+KYA +++KKF M NC +TP+ NEK G
Sbjct: 932 LGLLHYFLGMEVHQSDEGIFISQRKYAKNILKKFKMDNCKSVTTPLLPNEKQKARYGADK 991
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
AD +RS+VG L YL +RP+I + S +SR+M P+Q +F AAKR+LRYI GT +GI
Sbjct: 992 ADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGI 1051
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
WY V KL+GY DSDWAG LDD KSTS Y F +L S EAEY+
Sbjct: 1052 WYKPVKESKLIGYTDSDWAGCLDDMKSTSSYAF-----------------SLGSAEAEYV 1094
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A + Q VWLRR++ ++ + Q + I+CD+K IA ++NP H+RTKHI I+Y+ I
Sbjct: 1095 AASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIR 1154
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAK 287
+ E+ LK+C T++Q+ DI TK+LS+ K
Sbjct: 1155 EAVDRQEVKLKFCRTDEQLADIFTKALSKEK 1185
Score = 137 bits (344), Expect(3) = e-117
Identities = 62/100 (62%), Positives = 81/100 (81%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKG+ Q+ +D+ ET++P+A ET+RT IALAAQ +W I+Q DVK AFLNG L EE+YV
Sbjct: 775 AKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVE 834
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYML 1383
QPEG+ V G E+KV++LKKALYG+K+APRAWYS+ID Y +
Sbjct: 835 QPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFI 874
Score = 48.9 bits (115), Expect(3) = e-117
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN TW+LV P ++ V G+K VY+TK + G +QK+KAR
Sbjct: 732 IEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKAR 772
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 281 bits (719), Expect(3) = e-117
Identities = 155/353 (43%), Positives = 209/353 (59%), Gaps = 1/353 (0%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F E F + P E LY+K Q D L+ CLYVDD+I+ G++ +I EFK M K+ EM
Sbjct: 1002 FKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTD 1060
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVV-EDGIG 923
+EV Q +GIF++Q+ YA +++KKF M + +P TPM KL E+G G
Sbjct: 1061 IGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEG 1120
Query: 922 MADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHG 743
+ D F+S+VG L YL +RP+I Y V +SR+M PT HF AAKRILRYI GT+ G
Sbjct: 1121 V-DPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFG 1179
Query: 742 IWYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEY 563
+ Y+ ++KLVGY DSDW G +DD+KSTSG++F + + KK +V LS+ EAEY
Sbjct: 1180 LHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEY 1239
Query: 562 IAVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYII 383
+A T C A+WLR LL + Q E IF DNK IA KNP FH+R+KHID RY+ I
Sbjct: 1240 VAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYI 1299
Query: 382 CNLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSVWS 224
+S ++ L+Y T+ Q+ D TK L + +GV RG V S
Sbjct: 1300 RECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGGVES 1352
Score = 142 bits (359), Expect(3) = e-117
Identities = 66/98 (67%), Positives = 80/98 (81%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGYSQ+ +D+DE F+P+A ETVR I+LAAQ KW IHQ DVK AFLNG+L EEVY+
Sbjct: 904 AKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAY 1389
QP+GYIV GEEDKV +LKK LYG+K+APRAW ++ID Y
Sbjct: 964 QPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKY 1001
Score = 49.7 bits (117), Expect(3) = e-117
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+ ++KN TW+L SLP G+K VY+ K +SKGE++++KAR
Sbjct: 859 KSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKAR 901
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 281 bits (718), Expect(3) = e-117
Identities = 154/351 (43%), Positives = 209/351 (59%), Gaps = 1/351 (0%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F E F + P E LY+K Q D L+ CLYVDD+I+ G++ ++ EFK M K+ EM
Sbjct: 1002 FKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTD 1060
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVV-EDGIG 923
+EV Q +GIF++Q+ YA +++KKF M + +P TPM KL E+G G
Sbjct: 1061 IGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEG 1120
Query: 922 MADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHG 743
+ D F+S+VG L YL +RP+I Y V +SR+M PT HF AAKRILRYI GT+ G
Sbjct: 1121 V-DPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFG 1179
Query: 742 IWYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEY 563
+ Y+ ++KLVGY DSDW G +DD+KSTSG++F + + KK +V LS+ EAEY
Sbjct: 1180 LHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEY 1239
Query: 562 IAVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYII 383
+A T C A+WLR LL + Q E IF DNK IA KNP FH+R+KHID RY+ I
Sbjct: 1240 VAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYI 1299
Query: 382 CNLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSV 230
+S ++ L+Y T+ Q+ DI TK L + +GV RG V
Sbjct: 1300 RECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSSLRGGV 1350
Score = 142 bits (358), Expect(3) = e-117
Identities = 66/98 (67%), Positives = 80/98 (81%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGY Q+ +D+DE F+P+A ETVR I+LAAQ KW IHQ DVK AFLNG+L EEVY+
Sbjct: 904 AKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAY 1389
QP+GYIV GEEDKV +LKKALYG+K+APRAW ++ID Y
Sbjct: 964 QPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKY 1001
Score = 49.7 bits (117), Expect(3) = e-117
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+ ++KN TW+L SLP G+K VY+ K +SKGE++++KAR
Sbjct: 859 KSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKAR 901
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 280 bits (715), Expect(3) = e-117
Identities = 154/353 (43%), Positives = 209/353 (59%), Gaps = 1/353 (0%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F E F + P E LY+K Q D L+ CLYVDD+I+ G++ +I EFK M K+ EM
Sbjct: 1002 FKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTD 1060
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVV-EDGIG 923
+EV Q +GIF++Q+ YA +++KKF + + +P TPM KL E+G G
Sbjct: 1061 IGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEG 1120
Query: 922 MADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHG 743
+ D F+S+VG L YL +RP+I Y V +SR+M PT HF AAKRILRYI GT+ G
Sbjct: 1121 V-DPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFG 1179
Query: 742 IWYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEY 563
+ Y+ ++KLVGY DSDW G +DD+KSTSG++F + + KK +V LS+ EAEY
Sbjct: 1180 LHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEY 1239
Query: 562 IAVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYII 383
+A T C A+WLR LL + Q E IF DNK IA KNP FH+R+KHID RY+ I
Sbjct: 1240 VAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYI 1299
Query: 382 CNLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSVWS 224
+S ++ L+Y T+ Q+ D TK L + +GV RG V S
Sbjct: 1300 RECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGGVES 1352
Score = 142 bits (359), Expect(3) = e-117
Identities = 66/98 (67%), Positives = 80/98 (81%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGYSQ+ +D+DE F+P+A ETVR I+LAAQ KW IHQ DVK AFLNG+L EEVY+
Sbjct: 904 AKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAY 1389
QP+GYIV GEEDKV +LKK LYG+K+APRAW ++ID Y
Sbjct: 964 QPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKY 1001
Score = 49.7 bits (117), Expect(3) = e-117
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+ ++KN TW+L SLP G+K VY+ K +SKGE++++KAR
Sbjct: 859 KSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKAR 901
>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
Length = 1318
Score = 267 bits (683), Expect(4) = e-115
Identities = 141/328 (42%), Positives = 199/328 (60%)
Frame = -1
Query: 1270 NGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXXXXX 1091
N F S +EPTLYVK L+V +YVDD++ G +++ + F+ M + +M
Sbjct: 973 NKFFCSESEPTLYVKSSLGKIQLIVSVYVDDLLITGPNKSDLNSFRNKMKSEFDMSDLGE 1032
Query: 1090 XXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGMADA 911
LE+ Q D I L Q+KYA +L+K+F M C P STP+ KL +DG + D
Sbjct: 1033 MSYFLGLEIQQRSDFICLHQKKYAGELLKRFKMEGCKPVSTPLTTGTKLCKDDGSTLVDV 1092
Query: 910 KRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGIWYT 731
++R ++G L YL SRP+I Y S +SRFM PT+ H AAKR+LRY+ GT+ +G+ Y
Sbjct: 1093 TQYRKLIGCLLYLSASRPDIMYTTSLLSRFMQSPTKTHLTAAKRVLRYVKGTLNYGLLYG 1152
Query: 730 NVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYIAVT 551
V N +L GY DSDWAGS DD KSTSGY F+ + S + KK D+VA SS EAEY+A
Sbjct: 1153 QVENKELEGYSDSDWAGSYDDSKSTSGYCFSFGSAMFSWNSKKQDIVAQSSAEAEYVAAA 1212
Query: 550 GDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIICNLI 371
QA+WLR++L ++ Q ++ DN+ IA KNP H+RTKHI I++++I +
Sbjct: 1213 SATNQALWLRKVLLDLKFEQINPTVLWLDNQSAIALAKNPINHSRTKHIRIKFHVIREAV 1272
Query: 370 SSGEIALKYCNTNQQIVDILTKSLSQAK 287
++ E+ + YC T+ QI DI TK L + K
Sbjct: 1273 TNNEVVVNYCGTDDQIADIFTKGLCREK 1300
Score = 128 bits (321), Expect(4) = e-115
Identities = 59/101 (58%), Positives = 76/101 (75%)
Frame = -3
Query: 1679 KGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVVQ 1500
+G+SQ VDF ETF+P+A +T+R +ALA + KW I DVK AFLNG + E++YV Q
Sbjct: 873 RGFSQVHGVDFFETFAPVARHDTIRLLVALAGREKWRIWHMDVKSAFLNGTISEDIYVEQ 932
Query: 1499 PEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
PEG++ G+EDKV KL KALYG+K+APRAWY KIDAY+ N
Sbjct: 933 PEGFVEKGKEDKVCKLIKALYGLKQAPRAWYKKIDAYLRSN 973
Score = 48.5 bits (114), Expect(4) = e-115
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Frame = -1
Query: 2215 SKAYRLYNLISDKIIISRDVKFKEAEHWTW---EIGSSKPTPSPVHVVPFNTTLDTTPEP 2045
SK YRL+N+ + K+ ISRDV F E HW W EI + N + +
Sbjct: 720 SKGYRLFNVETKKVFISRDVVFNEDIHWNWMKNEIAENN-----------NDNVAVNLDV 768
Query: 2044 YEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQNFRCLSDIYASCNFALLASNPMYY 1865
+E+ + R L DIY CN A+ ++P Y
Sbjct: 769 FEEEAGHELDDNIDDMPV-----------------RGIRSLQDIYEQCNVAI--TDPCSY 809
Query: 1864 EDVAGSDIWQNAMLEELSAIEK 1799
+ A + W+ AM E++ I++
Sbjct: 810 IEAASDEQWKLAMEAEMTMIKR 831
Score = 44.3 bits (103), Expect(4) = e-115
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+K+NQTW LV P + V +K ++RTK +S G I K KAR
Sbjct: 829 IKRNQTWILVDRPKHQRVISVKWIFRTKLNSDGSINKLKAR 869
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 275 bits (703), Expect(3) = e-115
Identities = 153/353 (43%), Positives = 208/353 (58%), Gaps = 1/353 (0%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F E F + P E LY+K Q D L+ CLYVDD+I+ G++ ++ EFK M K+ EM
Sbjct: 941 FKEKDFIKCPYEHALYIKIQKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTD 999
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVV-EDGIG 923
+EV Q + IF++Q+ YA +++KKF M + +P TPM KL E+G G
Sbjct: 1000 IGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEG 1059
Query: 922 MADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHG 743
+ D F+S+VG L YL +RP+I Y V +SR+M PT HF AAKRILRYI GT+ G
Sbjct: 1060 V-DPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFG 1118
Query: 742 IWYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEY 563
+ Y+ ++KLVGY DSDW +DD+KSTSG++F + + KK +V LS+ EAEY
Sbjct: 1119 LHYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEY 1178
Query: 562 IAVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYII 383
+A T C A+WLR LL + Q E IF DNK IA KNP FH+R+KHID RY+ I
Sbjct: 1179 VAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYI 1238
Query: 382 CNLISSGEIALKYCNTNQQIVDILTKSLSQAKHCFFCLQMGVIHI*SRGSVWS 224
+S ++ L+Y T+ Q+ DI TK L + +GV RG V S
Sbjct: 1239 RECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSSLRGGVES 1291
Score = 141 bits (356), Expect(3) = e-115
Identities = 65/98 (66%), Positives = 79/98 (80%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGYSQ+ +D+DE F+P+A ETVR I+LAAQ KW IHQ D K AFLNG+ EEVY+
Sbjct: 843 AKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIE 902
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAY 1389
QP+GYIV GEEDKV +LKKALYG+K+APRAW ++ID Y
Sbjct: 903 QPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKY 940
Score = 49.7 bits (117), Expect(3) = e-115
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+ ++KN TW+L SLP G+K VY+ K +SKGE++++KAR
Sbjct: 798 KSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKAR 840
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 277 bits (709), Expect(4) = e-114
Identities = 152/331 (45%), Positives = 201/331 (60%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F++NGF+RS N+ YVKK + LVV LYVDD+I GS+ I FK M + EM
Sbjct: 1005 FIKNGFERSINDAAFYVKKTSK-EILVVSLYVDDIIVTGSNVKEIERFKEEMKNEFEMTD 1063
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
+EV Q +GIFLSQ+ YA L+KKF M C STP+ + K+ +
Sbjct: 1064 LGELSYFLGMEVNQDDEGIFLSQENYAKKLLKKFGMQECKSVSTPLTPHGKIEEVLSEKL 1123
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
D +RSM+GG+ YL SRP+I Y S +SR+M P + H AKR+LRY+ GT+ +GI
Sbjct: 1124 EDVTMYRSMIGGMLYLCASRPDIMYASSYLSRYMRSPLKQHLQEAKRVLRYVKGTLTYGI 1183
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
+ V +LVG+ DSDWAGS++DKKSTSGY+FT+ G + K VA S+ EAEYI
Sbjct: 1184 HFKRVEKPELVGFSDSDWAGSVEDKKSTSGYVFTIGSGAFCWNSSKQKTVAQSTAEAEYI 1243
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
AV A QA+WL+RL+ + + I IFCDNK IA KNP H RTKHIDI+Y+ +
Sbjct: 1244 AVCSAANQAIWLQRLVNEIGFKAEKGIRIFCDNKSAIAIGKNPVQHRRTKHIDIKYHFVR 1303
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSLSQAK 287
+G+I L+YC QI DILTK L+ +
Sbjct: 1304 EAQQNGKIKLEYCPGELQIADILTKPLNTTR 1334
Score = 127 bits (319), Expect(4) = e-114
Identities = 57/102 (55%), Positives = 78/102 (76%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
A+G++Q+ VD+ ETF+P++ ++T+RT +A+AAQ W + Q DVK AFLNG+L EEVY+
Sbjct: 907 ARGFTQEYGVDYLETFAPVSRYDTIRTIMAIAAQQGWKLFQMDVKSAFLNGDLEEEVYIE 966
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
QP G+I EE KV KL KALYG+K+APRAWY +ID Y + N
Sbjct: 967 QPPGFIEEKEEGKVLKLHKALYGLKQAPRAWYGRIDGYFIKN 1008
Score = 44.7 bits (104), Expect(4) = e-114
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = -2
Query: 1812 QQLKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
+ ++KN+TW++V+ P +KNV +K ++R K D+ GE K KAR
Sbjct: 862 RMIEKNKTWEVVARPKDKNVISVKWIFRLKTDASGEAIKRKAR 904
Score = 35.4 bits (80), Expect(4) = e-114
Identities = 37/160 (23%), Positives = 57/160 (35%), Gaps = 20/160 (12%)
Frame = -1
Query: 2218 QSKAYRLYNLISDKIIISRDVKFKEAEHWTW-EIGSSKPTPSPVHVVP--------FNTT 2066
+SK YR++ L +KI +S+DV F E + W+ E G K S V + N
Sbjct: 718 ESKGYRVFLLNEEKIEVSKDVTFDEKKTWSHDEKGERKAILSLVKINSQEQGGGNDLNAH 777
Query: 2065 LDTTPEPYEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQNFRCLSDIYASCNFA-- 1892
+D + Q P+ FR ++++ N
Sbjct: 778 IDQVSNAFNQLHISSRGVQNSHEEGEESVG-----------PRGFRSINNLMDQTNEVEG 826
Query: 1891 ---------LLASNPMYYEDVAGSDIWQNAMLEELSAIEK 1799
++A P E+ + W AM EEL IEK
Sbjct: 827 EALIHEMCLMMAEEPQALEEAMKDEKWIEAMREELRMIEK 866
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 283 bits (724), Expect(3) = e-113
Identities = 144/327 (44%), Positives = 205/327 (62%)
Frame = -1
Query: 1279 FLENGFQRSPNEPTLYVKKQGNIDFLVVCLYVDDMIYMGSSEAIIYEFKACMMKKIEMXX 1100
F +NGF NE LYVK N D L +CLYVDD+I+ G++ + +FK M ++ +M
Sbjct: 692 FQDNGFVHCQNEYALYVKTFNNGDVLFICLYVDDLIFTGNNPNLFEDFKESMSREFDMTD 751
Query: 1099 XXXXXXXXXLEVMQSRDGIFLSQQKYATDLMKKFNMMNCHPASTPMNLNEKLVVEDGIGM 920
+EV Q+++GIF+SQ++Y +++KKFNM++C+P +TPM KL D
Sbjct: 752 MGLMSYYLGMEVKQTQNGIFVSQERYTKEVLKKFNMLDCNPVNTPMEGGLKLSKFDEGEK 811
Query: 919 ADAKRFRSMVGGLNYLLHSRPNIAYYVSRISRFMHCPTQHHFGAAKRILRYIGGTIGHGI 740
D+ F+S+VG L YL ++RP+I Y V + RFM PT H AAKRIL Y+ GTI G+
Sbjct: 812 VDSTIFKSLVGSLRYLTNTRPDILYAVGVVCRFMEAPTSPHLKAAKRILCYLKGTIDFGL 871
Query: 739 WYTNVPNFKLVGYLDSDWAGSLDDKKSTSGYIFTLRLGVIS*S*KK*DVVALSSLEAEYI 560
+Y+ N+KLVG+ DSD+AG +DD+KST+G++F + V + S KK +V LS+ EAEY+
Sbjct: 872 FYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFVFFMGDCVFTWSSKKQGIVTLSTCEAEYV 931
Query: 559 AVTGDACQAVWLRRLLANVLQVQNEAIDIFCDNKVTIARTKNPAFHNRTKHIDIRYYIIC 380
A T C A+WLRRLL + +Q E+ I+ DN+ KNP FH R+KHID RY+ I
Sbjct: 932 AATSCTCHAIWLRRLLEELQLLQKESTKIYVDNRSAQELAKNPVFHERSKHIDTRYHFIR 991
Query: 379 NLISSGEIALKYCNTNQQIVDILTKSL 299
I+ E+ L + T Q+ DI TK L
Sbjct: 992 ECITKKEVELTHVKTQDQVADIFTKPL 1018
Score = 134 bits (337), Expect(3) = e-113
Identities = 63/102 (61%), Positives = 77/102 (75%)
Frame = -3
Query: 1682 AKGYSQQQSVDFDETFSPIALFETVRTFIALAAQLKWPIHQFDVKYAFLNGELGEEVYVV 1503
AKGY QQ VD+DE F+P+A ET+R I+LAAQ+KW I QFDVK AFLNG L E+VYV
Sbjct: 594 AKGYKQQYEVDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKSAFLNGYLEEDVYVE 653
Query: 1502 QPEGYIVTGEEDKVYKLKKALYGMKKAPRAWYSKIDAYMLHN 1377
QP G+++ G+E KV KL KALYG+K+APRAW + ID Y N
Sbjct: 654 QPMGFVIEGQEGKVLKLNKALYGLKQAPRAWNTHIDKYFQDN 695
Score = 43.1 bits (100), Expect(3) = e-113
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = -2
Query: 1806 LKKNQTWDLVSLPGEKNVTGLK*VYRTKYDSKGEIQKFKAR 1684
++KN TW+L SLP G+K V++ K ++KGE+++ KAR
Sbjct: 551 IEKNNTWELSSLPKGHEAIGVKWVFKIKKNAKGEVERHKAR 591