BLASTX nr result
ID: Achyranthes22_contig00018788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00018788
(2204 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 280 e-126
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 245 e-121
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 244 e-121
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 246 e-121
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 244 e-118
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 237 e-117
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 237 e-116
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 234 e-115
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 235 e-115
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 223 e-108
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 237 e-108
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 237 e-108
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 237 e-107
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 228 e-106
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 210 e-105
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 229 e-105
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 197 e-105
gb|AFB73911.1| polyprotein [Citrus sinensis] 228 e-104
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 226 e-104
gb|AFB73912.1| polyprotein [Citrus sinensis] 231 e-104
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 280 bits (715), Expect(3) = e-126
Identities = 137/195 (70%), Positives = 164/195 (84%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
++VAH +LELEQLDVK AFLHGELEEEIYMTQP+GF VPGKE+ VCKL KSLYGLK S R
Sbjct: 890 AIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPR 949
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDS+MV+ GY RS YDCCVY+ + D SF+YLVLYVDDMLIAAK K IQ+LK
Sbjct: 950 QWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGL 1009
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LS+EF MKDLG A+KILGMEI RDR+++KLFLSQ+SYIQ +L RF MS++KP++TPS AN
Sbjct: 1010 LSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAAN 1069
Query: 1199 IHLSLSLAPISKKRR 1155
IHL+ AP S++ +
Sbjct: 1070 IHLTAMFAPQSEEEK 1084
Score = 199 bits (506), Expect(3) = e-126
Identities = 101/126 (80%), Positives = 108/126 (85%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVCTR DLA AVSVVSRFM G+EH +AVK IFRYLRGTSD+GLIYG DTQ LV
Sbjct: 1098 SLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLV 1157
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSDYA DVD+RRSMTGYVFTL G VSWKATLQ T+TLSTTEA++M LTEA KEGI
Sbjct: 1158 TGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGI 1217
Query: 763 WLKGLV 746
WLKGLV
Sbjct: 1218 WLKGLV 1223
Score = 23.9 bits (50), Expect(3) = e-126
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3
Query: 1167 EEKACMEKVPYSSAV 1123
EEK M +VPY+SAV
Sbjct: 1082 EEKEYMSRVPYASAV 1096
Score = 135 bits (339), Expect = 1e-28
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = -1
Query: 776 KRGNLAKGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMRTGKRIKV 597
K G KG DL L D+ T+YCD+L AIC+ KDQVHH+RTKHIDVR+ F+R+ KRIKV
Sbjct: 1214 KEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERTKHIDVRYHFLRSEKRIKV 1273
Query: 596 KKIGTTENPADIFTKPVPYSKFKLCMDLLNISDC 495
KK+GT +NPAD+FTKPVP SKF+ C+DLLNI C
Sbjct: 1274 KKVGTADNPADMFTKPVPQSKFQHCLDLLNIRSC 1307
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 245 bits (625), Expect(3) = e-121
Identities = 128/191 (67%), Positives = 148/191 (77%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ V +L KSLYGLK S R
Sbjct: 794 SIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPR 853
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDSFM + RS YD CVY K DGS +YL+LYVDDMLIAAKDKS I++LK Q
Sbjct: 854 QWYKRFDSFMFSQKFRRSNYDSCVY-LKVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQ 912
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI R+R KL+LSQK YI+ +L RF+M AKP++TP A+
Sbjct: 913 LSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAH 972
Query: 1199 IHLSLSLAPIS 1167
LS L P S
Sbjct: 973 FRLSSDLCPQS 983
Score = 159 bits (402), Expect(3) = e-121
Identities = 79/125 (63%), Positives = 99/125 (79%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+RLDL+ A+SVVSR+M N GKEH + V+ IF+YLRGTS L +G LV
Sbjct: 1001 SLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGTSSACLQFGRSRDGLV 1060
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D RRS+TGYVFT+ G AVSWKA+LQ+T+ LSTTE ++M ++EA KE I
Sbjct: 1061 -GYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEVEYMAISEACKEAI 1119
Query: 763 WLKGL 749
WL+GL
Sbjct: 1120 WLRGL 1124
Score = 83.6 bits (205), Expect(3) = e-121
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Frame = -1
Query: 713 IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 543
I+CD+ AIC KDQ+ H+RTKHIDVR+ F+R +KV KI T +NPAD+ TKPVP
Sbjct: 1137 IFCDSQSAICFTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVP 1196
Query: 542 YSKFKLCMDLLNIS 501
+KF+LC L+ ++
Sbjct: 1197 TTKFELCSSLVGVT 1210
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 244 bits (623), Expect(3) = e-121
Identities = 128/191 (67%), Positives = 148/191 (77%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L KSLYGLK S R
Sbjct: 824 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPR 883
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDSFM+ + RS YD CVY K DGS +YL+LYVDDMLIAAKDKS I +LK Q
Sbjct: 884 QWYKRFDSFMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQ 942
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI R+R KL+LSQK YI+ +LHRF+M AK ++T A+
Sbjct: 943 LSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAH 1002
Query: 1199 IHLSLSLAPIS 1167
LS L P S
Sbjct: 1003 FRLSSDLCPQS 1013
Score = 161 bits (408), Expect(3) = e-121
Identities = 82/126 (65%), Positives = 102/126 (80%)
Frame = -2
Query: 1126 SSLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSL 947
SSLMYAMVC+R DL+ A+SVVSR+M N GKEH +AV+ IFRYLRGTS L +G + L
Sbjct: 1030 SSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSDGL 1089
Query: 946 VAGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEG 767
V GY DSD+A D+D RRS+TGYVFT+ G AVSWKA+LQ+T+ LSTTEA++M ++EA KE
Sbjct: 1090 V-GYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMAISEACKEV 1148
Query: 766 IWLKGL 749
IWL+GL
Sbjct: 1149 IWLRGL 1154
Score = 81.6 bits (200), Expect(3) = e-121
Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Frame = -1
Query: 713 IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 543
I+CD+ AIC+ KDQ+ H+RTKHID+R+ F+R +KV KI T +NP D+ TKPVP
Sbjct: 1167 IFCDSQSAICLTKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVP 1226
Query: 542 YSKFKLCMDLLNIS 501
+KF+LC L+ ++
Sbjct: 1227 ATKFELCSSLVGVT 1240
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 246 bits (628), Expect(3) = e-121
Identities = 128/191 (67%), Positives = 148/191 (77%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA D ELEQ+DVK AFLHGELEE+IYM QP+GFVVPGKE+ VC+L KSLYGLK S R
Sbjct: 1122 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPR 1181
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDSFM+ + RS YD CVY K DGS +YL+LYVDDMLIAAKDKS I +LK Q
Sbjct: 1182 QWYKRFDSFMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQ 1240
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI R R KL+LSQK YI+ +L RF+M AKP++TP A+
Sbjct: 1241 LSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAH 1300
Query: 1199 IHLSLSLAPIS 1167
LS L P S
Sbjct: 1301 FRLSSDLCPQS 1311
Score = 156 bits (394), Expect(3) = e-121
Identities = 79/125 (63%), Positives = 98/125 (78%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+R DL+ A+SVVSR+M N GKEH +AV+ IFRYLRGTS L +G LV
Sbjct: 1329 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRDGLV 1388
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D RS+ GYVFT+ G AVSWKA+LQ+T+ LSTTEA++M ++EA KE I
Sbjct: 1389 -GYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAI 1447
Query: 763 WLKGL 749
WL+GL
Sbjct: 1448 WLRGL 1452
Score = 83.6 bits (205), Expect(3) = e-121
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Frame = -1
Query: 713 IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 543
I+CD+ AIC+ KDQ+ H+RTKHIDVR+ F+R +K+ KI +NPAD+ TKPVP
Sbjct: 1465 IFCDSQSAICLTKDQMFHERTKHIDVRYHFIRGLIAEGDVKICKISIHDNPADMMTKPVP 1524
Query: 542 YSKFKLCMDLLNISD 498
+KF+LC L+ +SD
Sbjct: 1525 ATKFELCSSLVILSD 1539
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 244 bits (622), Expect(3) = e-118
Identities = 125/184 (67%), Positives = 144/184 (78%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+V DLELEQLDVK FLHGELEEEIYM QPEGF+VPGKED+VCKL +SLYGLK S R
Sbjct: 905 SIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPR 964
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDSFM+ HG+ RS +D CVY K +GS +YL+LYVDDMLIAAK K I LK Q
Sbjct: 965 QWYKRFDSFMLSHGFKRSEFDSCVY-IKFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQ 1023
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI RDR LFLSQ+SYI+ +L RF+M AKP++TP +
Sbjct: 1024 LSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPH 1083
Query: 1199 IHLS 1188
LS
Sbjct: 1084 FKLS 1087
Score = 152 bits (385), Expect(3) = e-118
Identities = 77/125 (61%), Positives = 96/125 (76%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+ DL+ A+S+VSR+M N GKEH +AV+ IFRYLRGT+D L +G + LV
Sbjct: 1112 SLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRIDKGLV 1171
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D RRS+TGYVFT+ AVSWKATLQ + STTEA++M + EA KE +
Sbjct: 1172 -GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVVAQSTTEAEYMAIAEACKESV 1230
Query: 763 WLKGL 749
WLKGL
Sbjct: 1231 WLKGL 1235
Score = 80.5 bits (197), Expect(3) = e-118
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 588
KG +L + ++CD+ AIC+ KDQ+ H+RTKHID+++ ++R ++KV KI
Sbjct: 1233 KGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDIVAQGKLKVCKI 1292
Query: 587 GTTENPADIFTKPVPYSKFKLCMDLLNI 504
+NPAD+ TKP+P +KF+LC L+ I
Sbjct: 1293 SIHDNPADMMTKPIPVAKFELCSSLVGI 1320
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 237 bits (605), Expect(3) = e-117
Identities = 123/189 (65%), Positives = 144/189 (76%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL +SLYGLK S R
Sbjct: 916 SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPR 975
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QW K+FDSFM+ H + RS YD CVY K +GS +YL+LYVDDMLIAAK K I +LK
Sbjct: 976 QWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKL 1034
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI RDRK LFLSQ +YI+ +L RF+M AK ++TP +
Sbjct: 1035 LSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPH 1094
Query: 1199 IHLSLSLAP 1173
LS + P
Sbjct: 1095 FKLSAAQCP 1103
Score = 155 bits (391), Expect(3) = e-117
Identities = 80/125 (64%), Positives = 98/125 (78%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+R DL+ A+S+VSR+M N GKEH RAV+ IFRYLRGT+ L +G + L+
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGRTDKGLI 1182
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSDYA D+D RRS+TGYVFT+ AVSW+ATLQS + LSTTEA++M + EA KE I
Sbjct: 1183 -GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241
Query: 763 WLKGL 749
WLKGL
Sbjct: 1242 WLKGL 1246
Score = 80.5 bits (197), Expect(3) = e-117
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 588
KG +L E +++CD+ AI + KDQ+ H+RTKHID+++ F+R ++KV KI
Sbjct: 1244 KGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKI 1303
Query: 587 GTTENPADIFTKPVPYSKFKLCMDLLNI 504
T +NPAD+ TKP+P +KF+LC L+ +
Sbjct: 1304 STHDNPADMMTKPIPVAKFELCSSLVGL 1331
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 237 bits (605), Expect(3) = e-116
Identities = 123/189 (65%), Positives = 144/189 (76%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL +SLYGLK S R
Sbjct: 918 SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPR 977
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QW K+FDSFM+ H + RS YD CVY K +GS +YL+LYVDDMLIAAK K I +LK
Sbjct: 978 QWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKL 1036
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI RDRK LFLSQ +YI+ +L RF+M AK ++TP +
Sbjct: 1037 LSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPH 1096
Query: 1199 IHLSLSLAP 1173
LS + P
Sbjct: 1097 FKLSAAQCP 1105
Score = 154 bits (388), Expect(3) = e-116
Identities = 79/125 (63%), Positives = 98/125 (78%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+R DL+ A+S+VSR+M N GKEH RA++ IFRYLRGT+ L +G + L+
Sbjct: 1125 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGRTDKGLI 1184
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSDYA D+D RRS+TGYVFT+ AVSW+ATLQS + LSTTEA++M + EA KE I
Sbjct: 1185 -GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1243
Query: 763 WLKGL 749
WLKGL
Sbjct: 1244 WLKGL 1248
Score = 79.3 bits (194), Expect(3) = e-116
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 588
KG +L E +++CD+ AI + KDQ+ H+RTKHID+++ F+R ++KV KI
Sbjct: 1246 KGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKI 1305
Query: 587 GTTENPADIFTKPVPYSKFKLCMDLLNI 504
T +NPAD+ TKP+P +KF+LC L+ +
Sbjct: 1306 CTHDNPADMMTKPIPVAKFELCSSLVGL 1333
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 234 bits (596), Expect(3) = e-115
Identities = 122/189 (64%), Positives = 143/189 (75%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL +SLYGLK S R
Sbjct: 916 SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPR 975
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QW K+FDSFM+ H + RS YD CVY K +GS +YL+LYVDDMLIAAK K I +LK
Sbjct: 976 QWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKL 1034
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KIL MEI RDRK LFLSQ +YI+ +L RF+M AK ++TP +
Sbjct: 1035 LSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPH 1094
Query: 1199 IHLSLSLAP 1173
LS + P
Sbjct: 1095 FKLSAAQCP 1103
Score = 153 bits (387), Expect(3) = e-115
Identities = 79/125 (63%), Positives = 97/125 (77%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+R DL+ A+S+VSR+M N GKEH R V+ IFRYLRGT+ L +G + L+
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKFGRTDKGLI 1182
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSDYA D+D RRS+TGYVFT+ AVSW+ATLQS + LSTTEA++M + EA KE I
Sbjct: 1183 -GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241
Query: 763 WLKGL 749
WLKGL
Sbjct: 1242 WLKGL 1246
Score = 80.5 bits (197), Expect(3) = e-115
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 588
KG +L E +++CD+ AI + KDQ+ H+RTKHID+++ F+R ++KV KI
Sbjct: 1244 KGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKI 1303
Query: 587 GTTENPADIFTKPVPYSKFKLCMDLLNI 504
T +NPAD+ TKP+P +KF+LC L+ +
Sbjct: 1304 STHDNPADMMTKPIPVAKFELCSSLVGL 1331
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 235 bits (600), Expect(3) = e-115
Identities = 123/184 (66%), Positives = 142/184 (77%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA DLELEQLDVK AFLHGELEEEIYM QPEGF+VPGKED+VCKL +SLYGLK S R
Sbjct: 758 SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPR 817
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDSFM+ HG+ RS +D CVY K + S +YL+LYVDDMLIAAK K I LK Q
Sbjct: 818 QWYKRFDSFMLSHGFKRSEFDSCVY-IKFVNVSPIYLLLYVDDMLIAAKSKEQITTLKKQ 876
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDL A+KILGMEI RDR LFLSQ+SYI+ +L RF+M KP++T +
Sbjct: 877 LSSEFDMKDLDAAKKILGMEITRDRNSGWLFLSQQSYIKKVLQRFNMHDTKPVSTHIAPH 936
Query: 1199 IHLS 1188
LS
Sbjct: 937 FKLS 940
Score = 152 bits (385), Expect(3) = e-115
Identities = 74/125 (59%), Positives = 97/125 (77%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+RLDL+ A+S+VSR+M N GKEH +A++ IFRYLR T++ L +G + L+
Sbjct: 965 SLMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAIQWIFRYLRDTANACLKFGRTNKGLI 1024
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D RRS+TGYVFT+ AVSWKATL+ + STTEA++M + EA KE +
Sbjct: 1025 -GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLRHVVAQSTTEAEYMAIAEACKESV 1083
Query: 763 WLKGL 749
WLKGL
Sbjct: 1084 WLKGL 1088
Score = 77.4 bits (189), Expect(3) = e-115
Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Frame = -1
Query: 713 IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 543
++CD+ AIC+ KDQ+ H+RTKHID+++ ++R ++KV KI T +NP D+ TK VP
Sbjct: 1101 LFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMTKHVP 1160
Query: 542 YSKFKLCMDLLNI 504
+KF+LC L+ I
Sbjct: 1161 VAKFELCSSLVGI 1173
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 223 bits (567), Expect(4) = e-108
Identities = 112/195 (57%), Positives = 141/195 (72%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
SL A DLE+EQLDVK AFLHG+LEEEIYM QPEGF V GK+ VCKLNKSLYGLK + R
Sbjct: 909 SLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPR 968
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWY KFDSFM Y ++ D CVY K+ + +F+ L+LYVDDMLI KDK I +LK
Sbjct: 969 QWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGD 1028
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LS F MKDLG AQ+ILGM+I R+R +KL+LSQ+ YI+ +L RF+M AKP++TP +
Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088
Query: 1199 IHLSLSLAPISKKRR 1155
+ LS + P + + +
Sbjct: 1089 LKLSKKMCPTTVEEK 1103
Score = 138 bits (348), Expect(4) = e-108
Identities = 70/123 (56%), Positives = 89/123 (72%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVCTR D+A AV VVSRF+ N GKEH AVK I RYLRGT+ L +G + ++
Sbjct: 1117 SLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPIL 1175
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY D+D A D+D+R+S TGY+FT G A+SW++ LQ + LSTTEA+++ TE KE I
Sbjct: 1176 KGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMI 1235
Query: 763 WLK 755
WLK
Sbjct: 1236 WLK 1238
Score = 76.6 bits (187), Expect(4) = e-108
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -1
Query: 746 RDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMRT---GKRIKVKKIGTTE 576
++L L + +YCD+ AI + K+ ++H RTKHIDVR+ ++R + +KV KI T E
Sbjct: 1242 QELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNE 1301
Query: 575 NPADIFTKPVPYSKFKLCMDLLNI 504
NPAD+ TK VP +KF+LC +L+ +
Sbjct: 1302 NPADMLTKVVPRNKFELCKELVGM 1325
Score = 26.6 bits (57), Expect(4) = e-108
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3
Query: 1176 TYFEEKACMEKVPYSSAV 1123
T EEK M KVPYSSAV
Sbjct: 1098 TTVEEKGNMAKVPYSSAV 1115
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 237 bits (605), Expect(3) = e-108
Identities = 123/190 (64%), Positives = 145/190 (76%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L KSLYGLK S R
Sbjct: 841 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPR 900
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDSFM+ + RS YD CVY K DGS +YL+LYVDDMLIAAKDKS I +LK Q
Sbjct: 901 QWYKRFDSFMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQ 959
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI R+R KL+LSQK YI+ +L RF+M AKP+ S
Sbjct: 960 LSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKPIYVHSQIY 1019
Query: 1199 IHLSLSLAPI 1170
+ S ++ +
Sbjct: 1020 VPYSSAVGSL 1029
Score = 155 bits (393), Expect(3) = e-108
Identities = 78/125 (62%), Positives = 99/125 (79%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAM+C+R DL+ A+SVVSR+MVN GKEH +AV+ IFRYL GTS L +G LV
Sbjct: 1028 SLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHGTSSACLQFGRSRDGLV 1087
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D RRS+TGYVFT+ G AVSWKA+LQ+T+ LSTTEA+++ ++EA KE I
Sbjct: 1088 -GYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYIAISEACKEAI 1146
Query: 763 WLKGL 749
WL+ L
Sbjct: 1147 WLRDL 1151
Score = 49.3 bits (116), Expect(3) = e-108
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -1
Query: 713 IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR 618
I CD+ AIC+ KDQ+ H+RTKHIDVR+ F+R
Sbjct: 1164 IVCDSQSAICLTKDQMFHERTKHIDVRYHFIR 1195
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 237 bits (605), Expect(3) = e-108
Identities = 123/190 (64%), Positives = 145/190 (76%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L KSLYGLK S R
Sbjct: 673 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPR 732
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FDSFM+ + RS YD CVY K DGS +YL+LYVDDMLIAAKDKS I +LK Q
Sbjct: 733 QWYKRFDSFMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQ 791
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI R+R KL+LSQK YI+ +L RF+M AKP+ S
Sbjct: 792 LSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKPIYVHSQIY 851
Query: 1199 IHLSLSLAPI 1170
+ S ++ +
Sbjct: 852 VPYSSAVGSL 861
Score = 155 bits (393), Expect(3) = e-108
Identities = 78/125 (62%), Positives = 99/125 (79%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAM+C+R DL+ A+SVVSR+MVN GKEH +AV+ IFRYL GTS L +G LV
Sbjct: 860 SLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHGTSSACLQFGRSRDGLV 919
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D RRS+TGYVFT+ G AVSWKA+LQ+T+ LSTTEA+++ ++EA KE I
Sbjct: 920 -GYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYIAISEACKEAI 978
Query: 763 WLKGL 749
WL+ L
Sbjct: 979 WLRDL 983
Score = 49.3 bits (116), Expect(3) = e-108
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -1
Query: 713 IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR 618
I CD+ AIC+ KDQ+ H+RTKHIDVR+ F+R
Sbjct: 996 IVCDSQSAICLTKDQMFHERTKHIDVRYHFIR 1027
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 237 bits (605), Expect(3) = e-107
Identities = 123/189 (65%), Positives = 144/189 (76%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL +SLYGLK S R
Sbjct: 916 SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPR 975
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QW K+FDSFM+ H + RS YD CVY K +GS +YL+LYVDDMLIAAK K I +LK
Sbjct: 976 QWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKL 1034
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI RDRK LFLSQ +YI+ +L RF+M AK ++TP +
Sbjct: 1035 LSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPH 1094
Query: 1199 IHLSLSLAP 1173
LS + P
Sbjct: 1095 FKLSAAQCP 1103
Score = 155 bits (391), Expect(3) = e-107
Identities = 80/125 (64%), Positives = 98/125 (78%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+R DL+ A+S+VSR+M N GKEH RAV+ IFRYLRGT+ L +G + L+
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGRTDKGLI 1182
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSDYA D+D RRS+TGYVFT+ AVSW+ATLQS + LSTTEA++M + EA KE I
Sbjct: 1183 -GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241
Query: 763 WLKGL 749
WLKGL
Sbjct: 1242 WLKGL 1246
Score = 46.6 bits (109), Expect(3) = e-107
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR 618
KG +L E +++CD+ AI + KDQ+ H+RTKHID+++ F+R
Sbjct: 1244 KGLYAELSGVESCISLHCDSESAIYLTKDQMFHERTKHIDIKYHFVR 1290
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 228 bits (581), Expect(3) = e-106
Identities = 112/193 (58%), Positives = 143/193 (74%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+ A D+E+EQ+DVK AFLHG+LEE+IYM+QPEGFV GKE+ VC+L KSLYGLK S R
Sbjct: 881 SIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPR 940
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK FD++M++ GY R YDCCVY+ +DG + L+LYVDDMLIA +D IQ+LK +
Sbjct: 941 QWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDMLIACRDMLQIQKLKKK 1000
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
L +EF MKDLG AQKILG+EI RDR K++LSQ+ YI IL RF+M+ AK ++ P A+
Sbjct: 1001 LGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMKILERFNMAEAKVVSIPLAAH 1060
Query: 1199 IHLSLSLAPISKK 1161
LS P +K
Sbjct: 1061 FRLSAEQRPSDQK 1073
Score = 151 bits (381), Expect(3) = e-106
Identities = 76/127 (59%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Frame = -2
Query: 1120 LMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGS-DTQSLV 944
LMYAM+CTR DLAQA+SVVS++M N GK H AVK IF+YL+ T +G+++ ++ V
Sbjct: 1090 LMYAMICTRPDLAQAMSVVSKYMSNPGKRHWEAVKWIFKYLKNTRQLGIMFERRQGEACV 1149
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
AG+ DSD+A D+D RRS GYVFT G VSWKATLQ+ LSTTEA++M LTEA+KE I
Sbjct: 1150 AGFVDSDFAGDLDRRRSTAGYVFTCGGGPVSWKATLQAVTALSTTEAEYMALTEASKEAI 1209
Query: 763 WLKGLVG 743
WL GL G
Sbjct: 1210 WLNGLAG 1216
Score = 58.2 bits (139), Expect(3) = e-106
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = -1
Query: 755 GTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMRTGKR---IKVKKIG 585
G + L + ++ + CD+ AI + K+QV H RTKHID R+ +R I V+K+
Sbjct: 1213 GLAGQLGVHQEGVVVKCDSQSAIHLAKNQVFHARTKHIDARYHRIRDWVEAGVIIVEKVH 1272
Query: 584 TTENPADIFTKPVPYSKFKLCMDLLNISDC 495
T +N AD TKPV K+ LL+I+ C
Sbjct: 1273 TDDNAADFLTKPVSVEKY-----LLSITTC 1297
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 210 bits (534), Expect(3) = e-105
Identities = 107/184 (58%), Positives = 132/184 (71%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
SLV DLELEQ+DVK FLHG+LEEE+YM QPEGFV E+ VC+L KSLYGLK S R
Sbjct: 938 SLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPR 997
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QW K+FD FM + RS +D CVY K + F+YL+LYVDDMLIA K+ I +K+Q
Sbjct: 998 QWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQ 1057
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LS+EF MKD+GGA +ILG++IYRDRK L LSQ+ YI+ +L RF+MS AK N P A+
Sbjct: 1058 LSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAH 1117
Query: 1199 IHLS 1188
L+
Sbjct: 1118 FKLA 1121
Score = 142 bits (358), Expect(3) = e-105
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
S+MYAM+ TR DLA A+ ++SR+M G H AVK + RYL+G D+ L++ + V
Sbjct: 1143 SIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTV 1202
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GYCDS+YA D+D RRS++GYVFT+ G VSWKA+LQ + +STTEA+++ L EA KE +
Sbjct: 1203 TGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAM 1262
Query: 763 WLKGLV 746
W+KGL+
Sbjct: 1263 WIKGLL 1268
Score = 81.3 bits (199), Expect(3) = e-105
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 588
KG +D+ +Q+D+ I+CD+ AIC+ K+ V+H+RTKHIDVRF ++R + V KI
Sbjct: 1265 KGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKI 1324
Query: 587 GTTENPADIFTKPVPYSKFKLCMDLLNI 504
T+ NP D TK +P +KFK + +L +
Sbjct: 1325 HTSRNPVDALTKCIPVNKFKSALGVLKL 1352
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 229 bits (584), Expect(3) = e-105
Identities = 122/185 (65%), Positives = 141/185 (76%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+VA DLELEQLDVK AFLHGELEEEIYM QPEGF+VPGKE +VCKL +S YGLK S R
Sbjct: 589 SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPR 648
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QWYK+FD FM+ HG+ RS +D CVY K +GS +YL LYVDDMLIAAK K I LK Q
Sbjct: 649 QWYKRFDLFMLSHGFKRSEFDSCVY-IKFVNGSPIYL-LYVDDMLIAAKSKEQITTLKKQ 706
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LSSEF MKDLG A+KILGMEI RDR LFLSQ+SYI+ +L RF+M AK ++ P +
Sbjct: 707 LSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKNVLQRFNMHDAKLVSIPIAPH 766
Query: 1199 IHLSL 1185
LS+
Sbjct: 767 FKLSV 771
Score = 156 bits (394), Expect(3) = e-105
Identities = 77/125 (61%), Positives = 97/125 (77%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAMVC+R DL+ A+S+VSR+M N GKEH +AV+ IFRYLRGT+D L +G + LV
Sbjct: 795 SLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRTDKGLV 854
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D RRS+TGYVFT+ A+SWKATLQ + STTEA++M + EA KE +
Sbjct: 855 -GYVDSDFAADLDKRRSLTGYVFTISSCAMSWKATLQPVVAQSTTEAEYMAIAEACKESV 913
Query: 763 WLKGL 749
WLKGL
Sbjct: 914 WLKGL 918
Score = 48.1 bits (113), Expect(3) = e-105
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR----TGKRI 603
KG +L + ++CD+ AIC+ KDQ+ H+RTKHID+++ ++R G+RI
Sbjct: 916 KGLFAELCGVDSCIILFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDVVVQGRRI 971
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 197 bits (502), Expect(3) = e-105
Identities = 100/184 (54%), Positives = 132/184 (71%)
Frame = -1
Query: 1739 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSR 1560
S+V DLELEQ+DVK AFLHGELEEE+YM QPEGF+ ++ VC L K LYGLK S R
Sbjct: 169 SVVVDQDLELEQMDVKTAFLHGELEEELYMEQPEGFISEDGKNKVCLLKKLLYGLKQSPR 228
Query: 1559 QWYKKFDSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQ 1380
QW K+F+ FM++ + RS +D CVY K+ + +YL+LYVDDMLIA K+KS I ++K+Q
Sbjct: 229 QWNKRFNRFMIDQNFIRSEHDACVYVKQVTEQEHLYLLLYVDDMLIAGKNKSEINKVKEQ 288
Query: 1379 LSSEFYMKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTAN 1200
LS EF MKD+G A +ILG++I RDRK L +SQ SYI ++ RF+M+ AK +P A+
Sbjct: 289 LSMEFEMKDMGPASRILGIDIIRDRKNGVLRMSQASYIHNVVQRFNMAEAKVTRSPIGAH 348
Query: 1199 IHLS 1188
L+
Sbjct: 349 FKLA 352
Score = 148 bits (373), Expect(3) = e-105
Identities = 71/126 (56%), Positives = 91/126 (72%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
S+MYAM+ TR DLA + +VSR+M G H AVK I RY+RG+ D+ L++ + + V
Sbjct: 374 SIMYAMIGTRPDLAYDICLVSRYMARPGSIHWEAVKWILRYMRGSQDLNLVFTKEKEFRV 433
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GYCDSDYA D+D RRS++GYVFT+ G VSWKA LQS LSTTEA+ M LTEA KE +
Sbjct: 434 TGYCDSDYAADLDRRRSVSGYVFTVGGNTVSWKANLQSVTALSTTEAEFMALTEAAKEAL 493
Query: 763 WLKGLV 746
W+KGL+
Sbjct: 494 WIKGLM 499
Score = 87.8 bits (216), Expect(3) = e-105
Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = -1
Query: 758 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 588
KG +DL L++D+ T++CD+ AIC+ K+ HH+RTKHIDVR+ F+R + V KI
Sbjct: 496 KGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTKHIDVRYNFIRDVVEAGDVDVLKI 555
Query: 587 GTTENPADIFTKPVPYSKFKLCMDLLNI 504
T+ NPAD TK +P +KF+ ++LL +
Sbjct: 556 HTSRNPADALTKSIPVNKFQSALELLKL 583
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 228 bits (580), Expect(3) = e-104
Identities = 112/189 (59%), Positives = 139/189 (73%)
Frame = -1
Query: 1721 DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSRQWYKKF 1542
DL LEQLDVK AFLHGELEEEIYM QPEGF GKE+ VC+LNKSLYGLK + R WYK+F
Sbjct: 896 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRYWYKRF 955
Query: 1541 DSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQLSSEFY 1362
DSF++ GYNR D C Y+K+ +D F+ L+LYVDDML+A +K IQELK QL+ EF
Sbjct: 956 DSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFE 1015
Query: 1361 MKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLS 1182
MKDLG A KILGM+I+RDR K++LSQK+Y++ IL RF+M K ++T N LS S
Sbjct: 1016 MKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKKILRRFNMQDCKSISTSLPVNFKLSSS 1075
Query: 1181 LAPISKKRR 1155
+ P ++ R
Sbjct: 1076 MCPSNEAER 1084
Score = 149 bits (377), Expect(3) = e-104
Identities = 74/126 (58%), Positives = 95/126 (75%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLM+AM+CTR D+AQAV VVSR+M N G EH AVK I RY+RGTSD+ L YG ++ V
Sbjct: 1098 SLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGG-SEFTV 1156
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D R+S TGYVFTL G AVSW + LQ+ + LSTTEA++M T+A K+ I
Sbjct: 1157 RGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAI 1216
Query: 763 WLKGLV 746
W++ L+
Sbjct: 1217 WIQRLL 1222
Score = 53.5 bits (127), Expect(3) = e-104
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = -1
Query: 743 DLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTEN 573
+L ++ + ++CD+ A+ I ++ H RTKHI V++ F+R + ++KI T EN
Sbjct: 1224 ELGHKQQKILVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKEN 1283
Query: 572 PADIFTKPVPYSKF 531
AD+ TKP+ KF
Sbjct: 1284 LADVLTKPINTDKF 1297
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 226 bits (575), Expect(3) = e-104
Identities = 110/190 (57%), Positives = 140/190 (73%)
Frame = -1
Query: 1721 DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSRQWYKKF 1542
+L LEQLDVK AFLHGELEEEIYM QPEGF +E+ VC+L KSLYGLK + R WYK+F
Sbjct: 892 ELHLEQLDVKTAFLHGELEEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRF 951
Query: 1541 DSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQLSSEFY 1362
DSF++ GYNR D C Y+K+ DG F+ L+LYVDDML+ +K +QELK QL+ EF
Sbjct: 952 DSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFD 1011
Query: 1361 MKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLS 1182
MKDLG A KILGM+I+RDRK +K++LSQK+Y+Q +L RF+M P++TP N LS S
Sbjct: 1012 MKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSS 1071
Query: 1181 LAPISKKRRV 1152
+ P S+ R+
Sbjct: 1072 MIPSSEAERM 1081
Score = 146 bits (369), Expect(3) = e-104
Identities = 73/126 (57%), Positives = 92/126 (73%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLMYAM+CTR D+AQAV VSRFM + GKEH AVK I RY+RGTS L +G ++ +
Sbjct: 1094 SLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGG-SEFTI 1152
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D R+S TGYVFTL G AVSW + LQ+ + LSTTEA++M T+A KE I
Sbjct: 1153 RGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAI 1212
Query: 763 WLKGLV 746
W + L+
Sbjct: 1213 WTQRLL 1218
Score = 57.4 bits (137), Expect(3) = e-104
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = -1
Query: 743 DLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTEN 573
+L ++ + T+YCD+ A+ I ++ H RTKHI V++ F+R + ++KI T +N
Sbjct: 1220 ELGHKQQKITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKIHTKDN 1279
Query: 572 PADIFTKPVPYSKFKLC 522
AD+ TKP+ KF C
Sbjct: 1280 LADVMTKPINSDKFIWC 1296
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 231 bits (589), Expect(3) = e-104
Identities = 113/189 (59%), Positives = 141/189 (74%)
Frame = -1
Query: 1721 DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKLNKSLYGLKLSSRQWYKKF 1542
DL LEQLDVK AFLHGELEEEIYM QPEGF GKE+ VC+LNKSLYGLK + R WYK+F
Sbjct: 896 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRF 955
Query: 1541 DSFMVEHGYNRSPYDCCVYHKKQKDGSFVYLVLYVDDMLIAAKDKSHIQELKDQLSSEFY 1362
DSF++ GYNR D C Y+K+ +D F+ L+LYVDDML+A +K IQELK QL+ EF
Sbjct: 956 DSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFE 1015
Query: 1361 MKDLGGAQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLS 1182
MKDLG A KILGM+I+RDR +K++LSQK+Y++ IL RF+M K ++TP N LS S
Sbjct: 1016 MKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPLPVNFKLSSS 1075
Query: 1181 LAPISKKRR 1155
+ P ++ R
Sbjct: 1076 MCPSNEAER 1084
Score = 147 bits (372), Expect(3) = e-104
Identities = 73/126 (57%), Positives = 94/126 (74%)
Frame = -2
Query: 1123 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 944
SLM+AM+CTR D+AQAV VSR+M N G EH AVK I RY+RGTS++ L YG ++ V
Sbjct: 1098 SLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGG-SEFTV 1156
Query: 943 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 764
GY DSD+A D+D R+S TGYVFTL G AVSW + LQ+ + LSTTEA++M T+A KE I
Sbjct: 1157 RGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAI 1216
Query: 763 WLKGLV 746
W++ L+
Sbjct: 1217 WIQRLL 1222
Score = 50.4 bits (119), Expect(3) = e-104
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = -1
Query: 743 DLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTEN 573
+L ++ + ++CD+ A+ I ++ H RTKHI V++ F+R + ++KI T EN
Sbjct: 1224 ELGHKQQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKEN 1283
Query: 572 PADIFTKPVPYSKF 531
AD+ TK + KF
Sbjct: 1284 LADVLTKSINTDKF 1297